Proteins Positions within proteins Leading proteins Protein Protein names Gene names Fasta headers Localization prob Score diff PEP Score Delta score Score for localization Diagnostic peak Number of Phospho (STY) Amino acid Sequence window Modification window Peptide window coverage Phospho (STY) Probabilities Phospho (STY) Score diffs Position in peptide Charge Mass error [ppm] Reporter intensity corrected 0___1 Reporter intensity corrected 0___2 Reporter intensity corrected 0___3 Reporter intensity corrected 1___1 Reporter intensity corrected 1___2 Reporter intensity corrected 1___3 Reporter intensity corrected 2___1 Reporter intensity corrected 2___2 Reporter intensity corrected 2___3 Reporter intensity corrected 3___1 Reporter intensity corrected 3___2 Reporter intensity corrected 3___3 Reporter intensity corrected 4___1 Reporter intensity corrected 4___2 Reporter intensity corrected 4___3 Reporter intensity corrected 5___1 Reporter intensity corrected 5___2 Reporter intensity corrected 5___3 Reporter intensity corrected 6___1 Reporter intensity corrected 6___2 Reporter intensity corrected 6___3 Reporter intensity corrected 7___1 Reporter intensity corrected 7___2 Reporter intensity corrected 7___3 Reporter intensity corrected 8___1 Reporter intensity corrected 8___2 Reporter intensity corrected 8___3 Reporter intensity corrected 9___1 Reporter intensity corrected 9___2 Reporter intensity corrected 9___3 Reporter intensity 0___1 Reporter intensity 0___2 Reporter intensity 0___3 Reporter intensity 1___1 Reporter intensity 1___2 Reporter intensity 1___3 Reporter intensity 2___1 Reporter intensity 2___2 Reporter intensity 2___3 Reporter intensity 3___1 Reporter intensity 3___2 Reporter intensity 3___3 Reporter intensity 4___1 Reporter intensity 4___2 Reporter intensity 4___3 Reporter intensity 5___1 Reporter intensity 5___2 Reporter intensity 5___3 Reporter intensity 6___1 Reporter intensity 6___2 Reporter intensity 6___3 Reporter intensity 7___1 Reporter intensity 7___2 Reporter intensity 7___3 Reporter intensity 8___1 Reporter intensity 8___2 Reporter intensity 8___3 Reporter intensity 9___1 Reporter intensity 9___2 Reporter intensity 9___3 Reporter intensity count 0___1 Reporter intensity count 0___2 Reporter intensity count 0___3 Reporter intensity count 1___1 Reporter intensity count 1___2 Reporter intensity count 1___3 Reporter intensity count 2___1 Reporter intensity count 2___2 Reporter intensity count 2___3 Reporter intensity count 3___1 Reporter intensity count 3___2 Reporter intensity count 3___3 Reporter intensity count 4___1 Reporter intensity count 4___2 Reporter intensity count 4___3 Reporter intensity count 5___1 Reporter intensity count 5___2 Reporter intensity count 5___3 Reporter intensity count 6___1 Reporter intensity count 6___2 Reporter intensity count 6___3 Reporter intensity count 7___1 Reporter intensity count 7___2 Reporter intensity count 7___3 Reporter intensity count 8___1 Reporter intensity count 8___2 Reporter intensity count 8___3 Reporter intensity count 9___1 Reporter intensity count 9___2 Reporter intensity count 9___3 Intensity Intensity___1 Intensity___2 Intensity___3 Ratio mod/base Reverse Potential contaminant id Protein group IDs Positions Position Peptide IDs Mod. peptide IDs Evidence IDs MS/MS IDs Best localization evidence ID Best localization MS/MS ID Best localization raw file Best localization scan number Best score evidence ID Best score MS/MS ID Best score raw file Best score scan number Best PEP evidence ID Best PEP MS/MS ID Best PEP raw file Best PEP scan number A0AVK6 102 A0AVK6 A0AVK6 Transcription factor E2F8 E2F8 sp|A0AVK6|E2F8_HUMAN Transcription factor E2F8 OS=Homo sapiens GN=E2F8 PE=1 SV=1 1 160.548 3.6645E-07 160.55 126.92 160.55 1 S RSGLPEAKDCIHEHLSGDEFEKSQPSRKEKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPXXXXXXXXX DCIHEHLS(1)GDEFEK DCIHEHLS(160.55)GDEFEK 8 3 -0.077657 12037 0 0 9222.1 0 0 11890 0 0 12154 0 0 8414.6 0 0 12172 0 0 7555.8 0 0 11848 0 0 10072 0 0 69349 0 0 11389 0 0 8728.5 0 0 11937 0 0 12301 0 0 8734.6 0 0 12326 0 0 7801.3 0 0 13987 0 0 9831 0 0 65575 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17479000 17479000 0 0 NaN 0 0 102 102 650 692 737 817 737 817 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13343 737 817 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13343 737 817 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13343 A0FGR8 761 A0FGR8 A0FGR8 Extended synaptotagmin-2 ESYT2 sp|A0FGR8|ESYT2_HUMAN Extended synaptotagmin-2 OS=Homo sapiens GN=ESYT2 PE=1 SV=1 0.999976 47.0357 4.08969E-05 116.74 97.664 116.74 1 S HISVKEPTPSIASDISLPIATQELRQRLRQL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPXXXXXX EPTPSIASDIS(1)LPIATQELR EPT(-77.53)PS(-71.64)IAS(-47.04)DIS(47.04)LPIAT(-53.96)QELR 11 3 -0.63059 7511.4 0 0 9332.3 0 0 7004.1 0 0 10429 0 0 7120.5 0 0 7776.1 0 0 7613 0 0 10902 0 0 10874 0 0 23591 0 0 7105.8 0 0 8822.2 0 0 7084.3 0 0 10599 0 0 7229.1 0 0 7996.4 0 0 7815.1 0 0 11526 0 0 10591 0 0 22466 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9081000 9081000 0 0 NaN 1 1 761 761 1095 1153 1241 1365 1241 1365 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22985 1241 1365 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22985 1241 1365 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22985 A0FGR8 691 A0FGR8 A0FGR8 Extended synaptotagmin-2 ESYT2 sp|A0FGR8|ESYT2_HUMAN Extended synaptotagmin-2 OS=Homo sapiens GN=ESYT2 PE=1 SV=1 0.849404 8.14043 1.25029E-34 296.6 278.87 296.6 1 S SVSKEGRKTSIKSHMSGSPGPGGSNTAPSTP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP S(0.02)HMS(0.849)GS(0.13)PGPGGSNTAPSTPVIGGSDKPGMEEK S(-16.23)HMS(8.14)GS(-8.14)PGPGGS(-122.66)NT(-173.69)APS(-223.94)T(-229.78)PVIGGS(-252.69)DKPGMEEK 4 4 0.27047 20346 0 0 12875 0 0 22945 0 0 11989 0 0 8518 0 0 29567 0 0 11175 0 0 21226 0 0 11879 0 0 11072 0 0 19262 0 0 12157 0 0 22783 0 0 12646 0 0 9534.1 0 0 28768 0 0 11267 0 0 21948 0 0 11691 0 0 10917 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 28345000 28345000 0 0 NaN 2 1 691 691 3834 4087 4361 4849;4850 4361 4849 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13715 4361 4849 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13715 4361 4849 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13715 A0JNW5 414 A0JNW5 A0JNW5 UHRF1-binding protein 1-like UHRF1BP1L sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 1 59.9752 0.0166594 59.975 42.244 59.975 1 S NVEMLKQAVKDHNVGSPPKSPTHASPQHTQT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX DHNVGS(1)PPK DHNVGS(59.98)PPK 6 3 0.94464 12311 0 0 13551 0 0 11866 0 0 15192 0 0 16700 0 0 12772 0 0 14874 0 0 14533 0 0 14412 0 0 2642 0 0 11648 0 0 12810 0 0 12030 0 0 15460 0 0 16636 0 0 12937 0 0 15215 0 0 14589 0 0 14240 0 0 2824.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27169000 27169000 0 0 NaN 3 2 414 414 695 739 789 871 789 871 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7327 789 871 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7327 789 871 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7327 A0JNW5 953 A0JNW5 A0JNW5 UHRF1-binding protein 1-like UHRF1BP1L sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 0.979541 18.4106 0.0077077 87.241 52.855 87.241 1 S LSHIPLKDPLLFKSASDTNLQKGISFMDYLS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX S(0.006)AS(0.98)DT(0.014)NLQK S(-21.89)AS(18.41)DT(-18.41)NLQK 3 2 -1.3795 42139 0 0 30433 0 0 43430 0 0 34595 0 0 28407 0 0 44096 0 0 26887 0 0 30110 0 0 31703 0 0 8748 0 0 39879 0 0 28773 0 0 43470 0 0 35420 0 0 29697 0 0 43616 0 0 27573 0 0 31008 0 0 31077 0 0 8934.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28125000 28125000 0 0 NaN 4 2 953 953 3604 3831 4084 4540 4084 4540 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9582 4084 4540 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9582 4084 4540 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9582 A0JNW5 989 A0JNW5 A0JNW5 UHRF1-binding protein 1-like UHRF1BP1L sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 0.7072 3.83414 0.0360263 52.424 34.011 52.424 1 S KISEDESSGLVYKSGSGEIGSETSDKKDSFY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX S(0.293)GS(0.707)GEIGSETSDKK S(-3.83)GS(3.83)GEIGS(-35.81)ET(-39.53)S(-43.16)DKK 3 3 -0.42173 48290 0 0 31243 0 0 58566 0 0 32986 0 0 27610 0 0 57075 0 0 24657 0 0 36647 0 0 33550 0 0 57384 0 0 45733 0 0 29524 0 0 57997 0 0 34150 0 0 29813 0 0 55986 0 0 25485 0 0 39280 0 0 32726 0 0 54882 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 34413000 34413000 0 0 NaN 5 2 989 989 3805 4053 4324 4804 4324 4804 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9510 4324 4804 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9510 4324 4804 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9510 A0JNW5 1078 A0JNW5 A0JNW5 UHRF1-binding protein 1-like UHRF1BP1L sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 0.533355 3.15865 0.0176417 59.306 27.243 59.306 1 S LDISKEETPPVRTLKSQSSLSGKPKERCPPN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPXXXXXX S(0.533)QS(0.258)S(0.206)LS(0.003)GKPK S(3.16)QS(-3.16)S(-4.13)LS(-22.54)GKPK 1 3 1.4455 18220 0 0 10761 0 0 19051 0 0 10502 0 0 8528.5 0 0 20791 0 0 8147.9 0 0 13304 0 0 10626 0 0 4302.9 0 0 17244 0 0 10164 0 0 19006 0 0 10964 0 0 9273 0 0 20294 0 0 8380 0 0 13764 0 0 10380 0 0 4359.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11364000 11364000 0 0 NaN 6 2 1078 1078 4248 4527 4826 5357 4826 5357 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8999 4826 5357 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8999 4826 5357 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8999 A0JNW5 1402 A0JNW5 A0JNW5 UHRF1-binding protein 1-like UHRF1BP1L sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 0.828701 7.03803 5.18526E-05 118.46 105.01 118.46 1 S YDLKKQRSVTQATQTSPGVPWPSQSANFPEF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPPPPPP SVTQAT(0.007)QT(0.164)S(0.829)PGVPWPSQSANFPEFSFDFTR S(-39.34)VT(-38.27)QAT(-20.64)QT(-7.04)S(7.04)PGVPWPS(-47.89)QS(-64.45)ANFPEFS(-95.54)FDFT(-105.43)R 9 3 3.6437 5934.3 0 0 3791.3 0 0 7773.3 0 0 4142.7 0 0 5026.4 0 0 6788.9 0 0 5997.2 0 0 8157.8 0 0 5938.6 0 0 84376 0 0 5622.2 0 0 3583.5 0 0 7689.8 0 0 4274.6 0 0 5276.7 0 0 6862.8 0 0 6056.4 0 0 10672 0 0 5862.1 0 0 79639 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 34859000 34859000 0 0 NaN 7 2 1402 1402 4580 4885 5203 5778 5203 5778 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23775 5203 5778 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23775 5203 5778 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23775 A0MZ66 506 A0MZ66 A0MZ66 Shootin-1 KIAA1598 sp|A0MZ66|SHOT1_HUMAN Shootin-1 OS=Homo sapiens GN=KIAA1598 PE=1 SV=4 0.999997 54.9849 4.72486E-05 128.45 97.223 128.45 1 S DSSSPTGILATSESKSMPVLGSVSSVTKTAL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX S(1)MPVLGSVSSVTK S(54.98)MPVLGS(-54.98)VS(-94.27)S(-98.76)VT(-116.47)K 1 3 1.38 8527.4 0 0 8540.1 0 0 10275 0 0 8734.9 0 0 2328.1 0 0 8942.8 0 0 1741.6 0 0 7161.3 0 0 9484.8 0 0 2727.6 0 0 8075.7 0 0 8068.7 0 0 10148 0 0 8960.2 0 0 2830.8 0 0 8937.4 0 0 2013 0 0 7334.6 0 0 9030.3 0 0 2734.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16767000 16767000 0 0 NaN 8 3 506 506 4033 4302 4590 5098 4590 5098 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19850 4590 5098 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19850 4590 5098 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19850 A1L390 76 A1L390 A1L390 Pleckstrin homology domain-containing family G member 3 PLEKHG3 sp|A1L390|PKHG3_HUMAN Pleckstrin homology domain-containing family G member 3 OS=Homo sapiens GN=PLEKHG3 PE=1 SV=1 0.998664 28.7353 0.0134069 75.788 42.457 75.788 1 S SNNNSSSWLNVKGPLSPFNSRAAAGPAHHKL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX GPLS(0.999)PFNS(0.001)R GPLS(28.74)PFNS(-28.74)R 4 2 1.0046 24357 0 0 13126 0 0 22957 0 0 11460 0 0 29820 0 0 26070 0 0 30647 0 0 20372 0 0 11678 0 0 9456.8 0 0 23043 0 0 12390 0 0 23282 0 0 12103 0 0 29850 0 0 25425 0 0 30637 0 0 20940 0 0 12328 0 0 9376.2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 15928000 15928000 0 0 NaN 9 4 76 76 1548 1630 1759 1952;1953 1759 1953 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15748 1759 1953 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15748 1759 1953 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15748 A2RU54 128 A2RU54 A2RU54 Homeobox protein HMX2 HMX2 sp|A2RU54|HMX2_HUMAN Homeobox protein HMX2 OS=Homo sapiens GN=HMX2 PE=2 SV=1 0.967507 14.7387 4.44886E-07 155.2 112.99 155.2 1 S HSDFKEEKERLLPAGSPSPGSERPRDGGAER X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPXXXXXX LLPAGS(0.968)PS(0.032)PGSERPR LLPAGS(14.74)PS(-14.74)PGS(-76.76)ERPR 6 3 0.24625 13576 0 0 6647.6 0 0 12469 0 0 6717.4 0 0 5574 0 0 12558 0 0 5014.6 0 0 8381.2 0 0 5556.4 0 0 2577.7 0 0 12843 0 0 6280.1 0 0 12534 0 0 6986.8 0 0 6056.3 0 0 12280 0 0 5146.1 0 0 8646.5 0 0 5459.5 0 0 2621.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15927000 15927000 0 0 NaN 10 5 128 128 2445 2583 2777 3100 2777 3100 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12604 2777 3100 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12604 2777 3100 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12604 A3KN83 689 A3KN83 A3KN83 Protein strawberry notch homolog 1 SBNO1 sp|A3KN83|SBNO1_HUMAN Protein strawberry notch homolog 1 OS=Homo sapiens GN=SBNO1 PE=1 SV=1 0.333122 0 0.013117 66.12 46.281 66.12 S RKKLYSLLGIDLTAPSNNSSPRDSPCKENKI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPXXXXXXXXX LYSLLGIDLT(0.001)APS(0.333)NNS(0.333)S(0.333)PR LY(-57.93)S(-57.83)LLGIDLT(-27.2)APS(0)NNS(0)S(0)PR 13 3 0.46884 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 11 6 689 689 2659 2807 3010 3349 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24036 3010 3349 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24036 3010 3349 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24036 A3KN83 692 A3KN83 A3KN83 Protein strawberry notch homolog 1 SBNO1 sp|A3KN83|SBNO1_HUMAN Protein strawberry notch homolog 1 OS=Homo sapiens GN=SBNO1 PE=1 SV=1 0.333122 0 0.013117 66.12 46.281 66.12 S LYSLLGIDLTAPSNNSSPRDSPCKENKIKKR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LYSLLGIDLT(0.001)APS(0.333)NNS(0.333)S(0.333)PR LY(-57.93)S(-57.83)LLGIDLT(-27.2)APS(0)NNS(0)S(0)PR 16 3 0.46884 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 12 6 692 692 2659 2807 3010 3349 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24036 3010 3349 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24036 3010 3349 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24036 A3KN83 693 A3KN83 A3KN83 Protein strawberry notch homolog 1 SBNO1 sp|A3KN83|SBNO1_HUMAN Protein strawberry notch homolog 1 OS=Homo sapiens GN=SBNO1 PE=1 SV=1 0.333122 0 0.013117 66.12 46.281 66.12 S YSLLGIDLTAPSNNSSPRDSPCKENKIKKRK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LYSLLGIDLT(0.001)APS(0.333)NNS(0.333)S(0.333)PR LY(-57.93)S(-57.83)LLGIDLT(-27.2)APS(0)NNS(0)S(0)PR 17 3 0.46884 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 13 6 693 693 2659 2807 3010 3349 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24036 3010 3349 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24036 3010 3349 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24036 A3KN83 162 A3KN83 A3KN83 Protein strawberry notch homolog 1 SBNO1 sp|A3KN83|SBNO1_HUMAN Protein strawberry notch homolog 1 OS=Homo sapiens GN=SBNO1 PE=1 SV=1 1 92.2953 0.00519236 92.295 52.378 92.295 1 S PSKDQVQLKDLLKNNSLNELMKLKPPANIAQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX NNS(1)LNELMK NNS(92.3)LNELMK 3 2 -0.19917 14367 0 0 12848 0 0 13226 0 0 13422 0 0 13033 0 0 14814 0 0 16108 0 0 14513 0 0 14040 0 0 22205 0 0 13590 0 0 12140 0 0 13387 0 0 13769 0 0 13279 0 0 14824 0 0 16192 0 0 15238 0 0 13941 0 0 21244 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18982000 18982000 0 0 NaN 14 6 162 162 2877 3050 3267 3623 3267 3623 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16811 3267 3623 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16811 3267 3623 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16811 A3KN83 815 A3KN83 A3KN83 Protein strawberry notch homolog 1 SBNO1 sp|A3KN83|SBNO1_HUMAN Protein strawberry notch homolog 1 OS=Homo sapiens GN=SBNO1 PE=1 SV=1 0.976114 16.7542 2.68175E-18 216.01 200.76 216.01 1 S IQSALLASGLGSKRPSFSSTPVISPAPNSTP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RPS(0.976)FS(0.021)S(0.002)T(0.002)PVISPAPNSTPANSNTNSNSSLITSQDAVER RPS(16.75)FS(-16.75)S(-27.77)T(-27.77)PVIS(-48.04)PAPNS(-85.81)T(-95.81)PANS(-120.54)NT(-139.74)NS(-166.21)NS(-165.07)S(-164.85)LIT(-187.08)S(-192.99)QDAVER 3 4 0.057126 2377.8 0 0 1286.1 0 0 2066.7 0 0 1943.8 0 0 1972.2 0 0 2227.2 0 0 2506.3 0 0 2750.5 0 0 1810.6 0 0 13992 0 0 2248.8 0 0 1218.7 0 0 2098.8 0 0 1960.2 0 0 2013.9 0 0 2252.7 0 0 2506.5 0 0 3160.2 0 0 1816 0 0 13239 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 44323000 44323000 0 0 NaN 15 6 815 815 3405 3617 3858 4283 3858 4283 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16460 3858 4283 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16460 3858 4283 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16460 A3KN83 214 A3KN83 A3KN83 Protein strawberry notch homolog 1 SBNO1 sp|A3KN83|SBNO1_HUMAN Protein strawberry notch homolog 1 OS=Homo sapiens GN=SBNO1 PE=1 SV=1 0.985492 20.7286 0.000855971 125.83 92.989 125.83 1 S EGARMWINDMKMRSFSPTMKVPVVKEDDEPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX S(0.008)FS(0.985)PT(0.006)MK S(-20.73)FS(20.73)PT(-22.03)MK 3 2 0.12516 101180 0 0 105540 0 0 93675 0 0 99473 0 0 58953 0 0 92530 0 0 61244 0 0 83623 0 0 103000 0 0 16072 0 0 95717 0 0 99665 0 0 94336 0 0 102390 0 0 61947 0 0 92976 0 0 63374 0 0 84710 0 0 99858 0 0 17069 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 177240000 177240000 0 0 NaN 16 6 214 214 3762 4002;4003 4267;4268 4742;4743 4268 4743 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14647 4268 4743 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14647 4268 4743 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14647 A5YKK6 1061 A5YKK6 A5YKK6 CCR4-NOT transcription complex subunit 1 CNOT1 sp|A5YKK6|CNOT1_HUMAN CCR4-NOT transcription complex subunit 1 OS=Homo sapiens GN=CNOT1 PE=1 SV=2 0.993729 22.0004 0.00017321 104.45 65.417 104.45 1 S TTVAKTVTVTRPTGVSFKKDVPPSINTTNID X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPXXXXXXXXXXXX TVTVTRPT(0.006)GVS(0.994)FKK T(-74.34)VT(-69.15)VT(-57.91)RPT(-22)GVS(22)FKK 11 4 -0.066359 37520 0 0 36767 0 0 38652 0 0 40105 0 0 38394 0 0 39104 0 0 35349 0 0 43089 0 0 39299 0 0 3123.3 0 0 35508 0 0 34752 0 0 38846 0 0 40959 0 0 38938 0 0 39297 0 0 36236 0 0 43161 0 0 38609 0 0 3938.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 70980000 70980000 0 0 NaN 17 7 1061 1061 5026 5360 5712 6351 5712 6351 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14475 5712 6351 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14475 5712 6351 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14475 A6NFI3 10 A6NFI3 A6NFI3 Zinc finger protein 316 ZNF316 sp|A6NFI3|ZN316_HUMAN Zinc finger protein 316 OS=Homo sapiens GN=ZNF316 PE=1 SV=1 0.823362 6.86135 6.45176E-16 125.86 99.922 125.86 1 S ______MAALHTTPDSPAAQLERAEDGSECD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPXXXXXXXX AALHT(0.007)T(0.17)PDS(0.823)PAAQLER AALHT(-20.69)T(-6.86)PDS(6.86)PAAQLER 9 2 -1.8384 22248 0 0 18976 0 0 22729 0 0 19110 0 0 21282 0 0 22871 0 0 20109 0 0 26669 0 0 22028 0 0 239390 0 0 21054 0 0 17927 0 0 22840 0 0 19674 0 0 21668 0 0 23255 0 0 20578 0 0 33817 0 0 21653 0 0 226040 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 17526000 17526000 0 0 NaN 18 8 10 10 43 46 50 60;61 50 60 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13088 50 60 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13088 50 60 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13088 A6NFI3 112 A6NFI3 A6NFI3 Zinc finger protein 316 ZNF316 sp|A6NFI3|ZN316_HUMAN Zinc finger protein 316 OS=Homo sapiens GN=ZNF316 PE=1 SV=1 1 82.2484 0.00634488 82.248 61.867 82.248 1 S ALGTQERLSRGGDAKSPVLQEKGLQASRAPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX GGDAKS(1)PVLQEK GGDAKS(82.25)PVLQEK 6 3 -0.8254 24099 0 0 30984 0 0 26261 0 0 34740 0 0 29402 0 0 27291 0 0 28518 0 0 31592 0 0 35508 0 0 12413 0 0 22812 0 0 29291 0 0 26356 0 0 35321 0 0 29646 0 0 27765 0 0 29262 0 0 31896 0 0 34739 0 0 12419 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 55258000 55258000 0 0 NaN 19 8 112 112 1428 1505 1614 1784 1614 1784 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11346 1614 1784 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11346 1614 1784 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11346 A6NGB9 383 A6NGB9 A6NGB9 WAS/WASL-interacting protein family member 3 WIPF3 sp|A6NGB9|WIPF3_HUMAN WAS/WASL-interacting protein family member 3 OS=Homo sapiens GN=WIPF3 PE=2 SV=4 0.833666 10.9411 0.0295592 53.747 24.856 53.747 1 S AGGGKLNPPPAPPARSPTTELSSKSQQATAW X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPXXXXXXX LNPPPAPPARS(0.834)PT(0.067)T(0.067)ELS(0.015)S(0.017)K LNPPPAPPARS(10.94)PT(-10.94)T(-10.94)ELS(-17.49)S(-16.85)K 11 3 0.70705 8205.4 0 0 16490 0 0 8032.5 0 0 15911 0 0 12766 0 0 8211.2 0 0 14795 0 0 12969 0 0 19165 0 0 18875 0 0 7763.7 0 0 15574 0 0 8160 0 0 16248 0 0 12709 0 0 8669.3 0 0 15083 0 0 13393 0 0 18725 0 0 18073 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9458100 9458100 0 0 NaN 20 9 383 383 2482 2621 2815 3142 2815 3142 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14558 2815 3142 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14558 2815 3142 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14558 A6NGB9 149 A6NGB9 A6NGB9 WAS/WASL-interacting protein family member 3 WIPF3 sp|A6NGB9|WIPF3_HUMAN WAS/WASL-interacting protein family member 3 OS=Homo sapiens GN=WIPF3 PE=2 SV=4 0.999985 48.3185 0.0307001 75.378 66.959 75.378 1 S RLPNKTISGPLIPPASPRLGNTSEAHGAART X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPXXXXXXXXXXXXX TISGPLIPPAS(1)PR T(-68.99)IS(-48.32)GPLIPPAS(48.32)PR 11 2 -0.60171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 21 9 149 149 4750 5066 5399 6003 5399 6003 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17671 5399 6003 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17671 5399 6003 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17671 A6NHT5 218 A6NHT5 A6NHT5 Homeobox protein HMX3 HMX3 sp|A6NHT5|HMX3_HUMAN Homeobox protein HMX3 OS=Homo sapiens GN=HMX3 PE=2 SV=1 1 103.213 0.000232424 103.21 81.962 103.21 1 S AAATPGAEDWKKGAESPEKKPACRKKKTRTV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX GAES(1)PEKKPACR GAES(103.21)PEKKPACR 4 3 0.91343 36041 0 0 8545.2 0 0 40658 0 0 9699.7 0 0 9120.7 0 0 42531 0 0 8197 0 0 20142 0 0 10237 0 0 4044.6 0 0 34121 0 0 8078.9 0 0 40287 0 0 10416 0 0 11107 0 0 40893 0 0 8444.1 0 0 21193 0 0 10014 0 0 4274.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27625000 27625000 0 0 NaN 22 10 218 218 1356 1430 1538 1701 1538 1701 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6872 1538 1701 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6872 1538 1701 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6872 A6NJL1;Q9BUG6 295;296 A6NJL1 A6NJL1 Zinc finger and SCAN domain-containing protein 5B;Zinc finger and SCAN domain-containing protein 5A ZSCAN5B;ZSCAN5A sp|A6NJL1|ZSA5B_HUMAN Zinc finger and SCAN domain-containing protein 5B OS=Homo sapiens GN=ZSCAN5B PE=2 SV=1;sp|Q9BUG6|ZSA5A_HUMAN Zinc finger and SCAN domain-containing protein 5A OS=Homo sapiens GN=ZSCAN5A PE=2 SV=1 0.907583 9.92135 0.0114611 70.47 64.172 70.47 1 S ALTHSGNRGDALNLSSPKRSKPDASSISQEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX GDALNLS(0.092)S(0.908)PKR GDALNLS(-9.92)S(9.92)PKR 8 3 -0.32324 15738 0 0 12639 0 0 15696 0 0 13209 0 0 11475 0 0 16720 0 0 9967 0 0 13185 0 0 13305 0 0 2464.3 0 0 14892 0 0 11943 0 0 15752 0 0 13584 0 0 11876 0 0 16563 0 0 10309 0 0 13437 0 0 12986 0 0 2625.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21655000 21655000 0 0 NaN 23 11 295 295 1382 1458 1567 1731 1567 1731 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12161 1567 1731 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12161 1567 1731 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12161 A6NJT0 341 A6NJT0 A6NJT0 Homeobox protein unc-4 homolog UNCX sp|A6NJT0|UNC4_HUMAN Homeobox protein unc-4 homolog OS=Homo sapiens GN=UNCX PE=2 SV=1 0.888831 9.02839 4.65158E-07 147.49 124.09 147.49 1 S LPKASPFSVESLLSDSPPRRKAASNAAAAAA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPXXXXXXXXXXXX ASPFSVESLLS(0.111)DS(0.889)PPR AS(-124.46)PFS(-114.86)VES(-60.25)LLS(-9.03)DS(9.03)PPR 13 3 -0.39639 5051.4 0 0 4455.2 0 0 5517.8 0 0 4037.9 0 0 4514.5 0 0 5934.2 0 0 4275.7 0 0 5278.1 0 0 4079.4 0 0 12343 0 0 4781.7 0 0 4206.3 0 0 5516.6 0 0 4201.9 0 0 4637 0 0 5878.5 0 0 4358.4 0 0 5691.6 0 0 4033.4 0 0 11744 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18319000 18319000 0 0 NaN 24 12 341 341 479 510 549 613 549 613 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23485 549 613 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23485 549 613 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23485 A7E2V4 567 A7E2V4 A7E2V4 Zinc finger SWIM domain-containing protein 8 ZSWIM8 sp|A7E2V4|ZSWM8_HUMAN Zinc finger SWIM domain-containing protein 8 OS=Homo sapiens GN=ZSWIM8 PE=1 SV=1 1 85.2868 0.00601428 85.287 19.713 85.287 1 S LGEGVPSSQRGPRRLSAEGGDKALHKMGPGG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX RLS(1)AEGGDK RLS(85.29)AEGGDK 3 3 0.53305 20718 0 0 13613 0 0 19776 0 0 15394 0 0 10853 0 0 20015 0 0 8826.2 0 0 15448 0 0 16018 0 0 2193.6 0 0 19601 0 0 12870 0 0 19854 0 0 15772 0 0 11519 0 0 19803 0 0 9278.6 0 0 15739 0 0 15500 0 0 2423.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23504000 23504000 0 0 NaN 25 13 567 567 3316 3518 3755 4171 3755 4171 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8097 3755 4171 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8097 3755 4171 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8097 A7MCY6 504 A7MCY6 A7MCY6 TANK-binding kinase 1-binding protein 1 TBKBP1 sp|A7MCY6|TBKB1_HUMAN TANK-binding kinase 1-binding protein 1 OS=Homo sapiens GN=TBKBP1 PE=1 SV=1 0.999826 38.616 0.0287835 54.008 27.573 54.008 1 S PRAYGSELYGPGRPLSPRRAFEGIRLRFEKQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPXXXXXXXXXXXXX AYGSELYGPGRPLS(1)PR AY(-48.58)GS(-46.37)ELY(-38.62)GPGRPLS(38.62)PR 14 3 -1.1752 9761.4 0 0 10350 0 0 8978.4 0 0 10276 0 0 11959 0 0 8926.5 0 0 15434 0 0 11528 0 0 10620 0 0 6113.6 0 0 9233.8 0 0 9776.9 0 0 9128.8 0 0 10534 0 0 12004 0 0 9051.9 0 0 15412 0 0 11646 0 0 10683 0 0 6023.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21103000 21103000 0 0 NaN 26 14 504 504 584 622 663 738 663 738 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14844 663 738 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14844 663 738 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14844 A8CG34;A6NF01;Q96HA1 412;19;435 A8CG34;Q96HA1 Q96HA1 Nuclear envelope pore membrane protein POM 121C;Putative nuclear envelope pore membrane protein POM 121B;Nuclear envelope pore membrane protein POM 121 POM121C;POM121B;POM121 sp|A8CG34|P121C_HUMAN Nuclear envelope pore membrane protein POM 121C OS=Homo sapiens GN=POM121C PE=1 SV=2;sp|A6NF01|P121B_HUMAN Putative nuclear envelope pore membrane protein POM 121B OS=Homo sapiens GN=POM121B PE=5 SV=2;sp|Q96HA1|P121A_HUMAN Nuclear env 0.923802 10.8643 1.88141E-22 253.79 237.22 253.79 1 S TRGISQLWKRNGPSSSPFSSPASSRSQTPER X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPXXXXXX NGPSS(0.076)S(0.924)PFSSPASSR NGPS(-33.27)S(-10.86)S(10.86)PFS(-42.3)S(-66.95)PAS(-101.31)S(-117.72)R 6 2 -0.027024 13895 0 0 12732 0 0 12391 0 0 14003 0 0 11698 0 0 12676 0 0 11598 0 0 14192 0 0 15356 0 0 4873 0 0 13142 0 0 12035 0 0 12555 0 0 14279 0 0 11914 0 0 12793 0 0 11914 0 0 14324 0 0 14993 0 0 4916.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11300000 11300000 0 0 NaN 27 15;1688 412;435 435 2816 2986 3199 3551 3199 3551 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10129 3199 3551 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10129 3199 3551 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10129 A8CG34;Q96HA1 2;2 A8CG34;Q96HA1 Q96HA1 Nuclear envelope pore membrane protein POM 121C;Nuclear envelope pore membrane protein POM 121 POM121C;POM121 sp|A8CG34|P121C_HUMAN Nuclear envelope pore membrane protein POM 121C OS=Homo sapiens GN=POM121C PE=1 SV=2;sp|Q96HA1|P121A_HUMAN Nuclear envelope pore membrane protein POM 121 OS=Homo sapiens GN=POM121 PE=1 SV=2 1 82.4943 0.0105875 82.494 59.714 82.494 1 S ______________MSPAAAAAGAGERRRPI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(1)PAAAAAGAGER S(82.49)PAAAAAGAGER 1 2 -0.93687 14990 0 0 10399 0 0 13037 0 0 10510 0 0 10505 0 0 12704 0 0 7691.3 0 0 11793 0 0 10652 0 0 5041.3 0 0 14177 0 0 9824.3 0 0 13203 0 0 10820 0 0 10773 0 0 12634 0 0 8045.3 0 0 12016 0 0 10385 0 0 5020 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6918800 6918800 0 0 NaN 28 15;1688 2;2 2 4072 4342 4632 5145 4632 5145 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7123 4632 5145 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7123 4632 5145 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7123 A8CG34 370 A8CG34 A8CG34 Nuclear envelope pore membrane protein POM 121C POM121C sp|A8CG34|P121C_HUMAN Nuclear envelope pore membrane protein POM 121C OS=Homo sapiens GN=POM121C PE=1 SV=2 0.994385 23.4321 1.43917E-16 243.17 200.14 243.17 1 S SQSSDDHLNKRSRSSSMSSLTGAYTSGIPSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP SS(0.005)S(0.994)MS(0.001)SLTGAYTSGIPSSSR S(-37.3)S(-23.43)S(23.43)MS(-30.39)S(-50.96)LT(-62.49)GAY(-145.66)T(-118.74)S(-123.32)GIPS(-168.15)S(-177.87)S(-177.7)R 3 2 0.43342 4532.3 0 0 6605.8 0 0 5317.2 0 0 6310.2 0 0 4597.5 0 0 5135.2 0 0 5347.4 0 0 9500 0 0 7712.2 0 0 54825 0 0 4291.7 0 0 6238.6 0 0 5301.6 0 0 6478.3 0 0 4720.9 0 0 5357.7 0 0 5472 0 0 11012 0 0 7509.4 0 0 51844 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12283000 12283000 0 0 NaN 29 15 370 370 4436 4727 5031 5580 5031 5580 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16683 5031 5580 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16683 5031 5580 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16683 B2RUZ4 22 B2RUZ4 B2RUZ4 Small integral membrane protein 1 SMIM1 sp|B2RUZ4|SMIM1_HUMAN Small integral membrane protein 1 OS=Homo sapiens GN=SMIM1 PE=1 SV=1 0.999883 39.5022 7.26634E-16 233.9 212.5 233.9 1 S HVHYSRWEDGSRDGVSLGAVSSTEEASRCRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPXXX DGVS(1)LGAVSSTEEASR DGVS(39.5)LGAVS(-39.5)S(-52.83)T(-72.44)EEAS(-152.32)R 4 2 0.5947 4356.3 0 0 11071 0 0 5197.8 0 0 10140 0 0 15807 0 0 4851.8 0 0 17183 0 0 13505 0 0 12026 0 0 47610 0 0 4125.3 0 0 10453 0 0 5318 0 0 10384 0 0 15429 0 0 5297.4 0 0 17284 0 0 14646 0 0 12085 0 0 45143 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16517000 16517000 0 0 NaN 30 16 22 22 692 736 786 868 786 868 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14602 786 868 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14602 786 868 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14602 B2RUZ4 27 B2RUZ4 B2RUZ4 Small integral membrane protein 1 SMIM1 sp|B2RUZ4|SMIM1_HUMAN Small integral membrane protein 1 OS=Homo sapiens GN=SMIM1 PE=1 SV=1 0.818812 6.57377 2.08949E-41 331.34 283.77 179.75 1 S RWEDGSRDGVSLGAVSSTEEASRCRRISQRL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPXXXXXXXX DGVSLGAVS(0.819)S(0.18)T(0.001)EEASR DGVS(-102.19)LGAVS(6.57)S(-6.57)T(-29.28)EEAS(-91.96)R 9 3 -0.26831 7557.3 0 0 10554 0 0 6816.1 0 0 10574 0 0 11265 0 0 8219 0 0 10744 0 0 9788.5 0 0 10618 0 0 8896.9 0 0 7148.3 0 0 9970.4 0 0 6959.5 0 0 10818 0 0 11161 0 0 8379.9 0 0 10958 0 0 10026 0 0 10482 0 0 8604.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25350000 25350000 0 0 NaN 31 16 27 27 692 736 785 867 785 867 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13340 784 866 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13306 784 866 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13306 B2RUZ4 28 B2RUZ4 B2RUZ4 Small integral membrane protein 1 SMIM1 sp|B2RUZ4|SMIM1_HUMAN Small integral membrane protein 1 OS=Homo sapiens GN=SMIM1 PE=1 SV=1 0.48928 0 2.08949E-41 331.34 283.77 331.34 S WEDGSRDGVSLGAVSSTEEASRCRRISQRLC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DGVSLGAVS(0.489)S(0.489)T(0.021)EEASR DGVS(-72.63)LGAVS(0)S(0)T(-13.58)EEAS(-99.51)R 10 2 -0.141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 32 16 28 28 692 736 784 866 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13306 784 866 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13306 784 866 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13306 B3KS81 486 B3KS81 B3KS81 Serine/arginine repetitive matrix protein 5 SRRM5 sp|B3KS81|SRRM5_HUMAN Serine/arginine repetitive matrix protein 5 OS=Homo sapiens GN=SRRM5 PE=1 SV=3 0.999817 37.3681 0.0481822 42.647 24.051 42.647 2 S RDRSRSRSPSKERDHSQLGSPSKERDHRRSR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX ERDHS(1)QLGS(0.998)PS(0.002)K ERDHS(37.37)QLGS(27.23)PS(-27.23)K 5 3 1.0095 0 5058.2 0 0 9726.4 0 0 5481.7 0 0 10595 0 0 7023.3 0 0 5099.5 0 0 7478.5 0 0 7808.3 0 0 10480 0 0 7332.7 0 0 4788 0 0 9193.1 0 0 5515.1 0 0 10738 0 0 7045.5 0 0 5404.6 0 0 7672.8 0 0 7948.2 0 0 10213 0 0 7085.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 145260000 0 145260000 0 NaN 33 17 486 486 1113 1172 1261 1387 1261 1387 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22120 1261 1387 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22120 1261 1387 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22120 B3KS81 490 B3KS81 B3KS81 Serine/arginine repetitive matrix protein 5 SRRM5 sp|B3KS81|SRRM5_HUMAN Serine/arginine repetitive matrix protein 5 OS=Homo sapiens GN=SRRM5 PE=1 SV=3 0.99811 27.2256 0.0481822 42.647 24.051 42.647 2 S RSRSPSKERDHSQLGSPSKERDHRRSRSPSK X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPXXXXXXXXXXXX ERDHS(1)QLGS(0.998)PS(0.002)K ERDHS(37.37)QLGS(27.23)PS(-27.23)K 9 3 1.0095 0 5058.2 0 0 9726.4 0 0 5481.7 0 0 10595 0 0 7023.3 0 0 5099.5 0 0 7478.5 0 0 7808.3 0 0 10480 0 0 7332.7 0 0 4788 0 0 9193.1 0 0 5515.1 0 0 10738 0 0 7045.5 0 0 5404.6 0 0 7672.8 0 0 7948.2 0 0 10213 0 0 7085.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 145260000 0 145260000 0 NaN 34 17 490 490 1113 1172 1261 1387 1261 1387 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22120 1261 1387 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22120 1261 1387 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22120 Q99613;B5ME19 39;39 Q99613 Q99613 Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein EIF3C;EIF3CL sp|Q99613|EIF3C_HUMAN Eukaryotic translation initiation factor 3 subunit C OS=Homo sapiens GN=EIF3C PE=1 SV=1;sp|B5ME19|EIFCL_HUMAN Eukaryotic translation initiation factor 3 subunit C-like protein OS=Homo sapiens GN=EIF3CL PE=3 SV=1 1 98.307 1.11314E-15 216.35 185.93 216.35 1 S TKPVGGNYGKQPLLLSEDEEDTKRVVRSAKD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPXXXXXXX QPLLLS(1)EDEEDTKR QPLLLS(98.31)EDEEDT(-98.31)KR 6 3 0.065383 75856 0 0 52528 0 0 82372 0 0 56484 0 0 53693 0 0 76724 0 0 54549 0 0 61051 0 0 59710 0 0 13983 0 0 71804 0 0 49643 0 0 82220 0 0 58079 0 0 56198 0 0 75831 0 0 55626 0 0 62267 0 0 58696 0 0 14579 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 333260000 333260000 0 0 NaN 35 18 39 39 3101 3289 3519 3901;3902 3519 3901 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15211 3519 3901 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15211 3519 3901 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15211 C9JLW8 21 C9JLW8 C9JLW8 Protein FAM195B FAM195B sp|C9JLW8|F195B_HUMAN Protein FAM195B OS=Homo sapiens GN=FAM195B PE=1 SV=1 0.935738 13.67 4.58539E-08 153.39 129.67 153.39 1 S VSRVVYNGKRTSSPRSPPSSSEIFTPAHEEN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP T(0.002)S(0.007)S(0.04)PRS(0.936)PPS(0.011)S(0.004)S(0.001)EIFTPAHEENVR T(-27.81)S(-21.58)S(-13.67)PRS(13.67)PPS(-19.19)S(-23.88)S(-30.15)EIFT(-67.65)PAHEENVR 6 3 -0.89426 6345.4 0 0 8408.1 0 0 7916.9 0 0 9385.6 0 0 7665.1 0 0 8398 0 0 9770.7 0 0 10293 0 0 10240 0 0 5607.1 0 0 6010.3 0 0 7948.4 0 0 7882.4 0 0 9561.3 0 0 7823.6 0 0 8496.1 0 0 9857.5 0 0 10420 0 0 10084 0 0 5518 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12681000 12681000 0 0 NaN 36 19 21 21 4968 5297 5643 6272 5643 6272 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12192 5643 6272 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12192 5643 6272 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12192 CON__ENSEMBL:ENSBTAP00000001528;Q15811 906;904 CON__ENSEMBL:ENSBTAP00000001528 CON__ENSEMBL:ENSBTAP00000001528 Intersectin-1 ITSN1 sp|Q15811|ITSN1_HUMAN Intersectin-1 OS=Homo sapiens GN=ITSN1 PE=1 SV=3 0.998668 28.8066 5.54646E-12 194.77 180.75 194.77 1 S QRSAFTPATATGSSPSPVLGQGEKVEGLQAQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPPPPXXXXXXX SAFTPATATGSS(0.001)PS(0.999)PVLGQGEK S(-110.77)AFT(-104.79)PAT(-88.66)AT(-67.47)GS(-47.65)S(-28.81)PS(28.81)PVLGQGEK 14 3 -0.86607 10438 0 0 7990.7 0 0 9386.8 0 0 8222.3 0 0 13230 0 0 10593 0 0 14723 0 0 12127 0 0 9312.4 0 0 13004 0 0 9873.3 0 0 7549.8 0 0 9562.2 0 0 8466.4 0 0 13215 0 0 10556 0 0 14767 0 0 12496 0 0 9418 0 0 12525 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 36319000 36319000 0 0 NaN + 37 20 906 906 3579 3802 4055 4510 4055 4510 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16494 4055 4510 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16494 4055 4510 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16494 CON__P04264;P04264 77;77 CON__P04264 CON__P04264 Keratin, type II cytoskeletal 1 KRT1 sp|P04264|K2C1_HUMAN Keratin, type II cytoskeletal 1 OS=Homo sapiens GN=KRT1 PE=1 SV=6 0.896739 12.0685 0.0218873 62.528 31.731 62.528 1 S FGSRSLVNLGGSKSISISVARGGGRGSGFGG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX S(0.056)IS(0.897)IS(0.048)VARGGGR S(-12.07)IS(12.07)IS(-12.75)VARGGGR 3 2 -1.0634 151550 0 0 14876 0 0 140490 0 0 15476 0 0 9554.1 0 0 149740 0 0 13060 0 0 57505 0 0 16610 0 0 9981.8 0 0 143370 0 0 14056 0 0 140500 0 0 18011 0 0 17479 0 0 142960 0 0 13223 0 0 61556 0 0 16238 0 0 10730 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 52198000 52198000 0 0 NaN + 38 23 77 77 3864 4117 4393 4887 4393 4887 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12623 4393 4887 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12623 4393 4887 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12623 CON__P05787;P05787 34;34 CON__P05787 CON__P05787 Keratin, type II cytoskeletal 8 KRT8 sp|P05787|K2C8_HUMAN Keratin, type II cytoskeletal 8 OS=Homo sapiens GN=KRT8 PE=1 SV=7 0.979471 17.1003 2.86075E-05 144.47 32.865 144.47 1 S AFSSRSYTSGPGSRISSSSFSRVGSSNFRGG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPXXXXXXXXX IS(0.979)S(0.019)S(0.001)SFSR IS(17.1)S(-17.1)S(-28.36)S(-56.21)FS(-103.75)R 2 2 -0.40693 11612 0 0 44385 0 0 9779.3 0 0 45333 0 0 8757.7 0 0 8577.6 0 0 8407 0 0 20283 0 0 50830 0 0 3530.2 0 0 10981 0 0 41935 0 0 9939.4 0 0 45898 0 0 8982.7 0 0 10392 0 0 9736.2 0 0 19998 0 0 48355 0 0 3793.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 33393000 33393000 0 0 NaN + 39 24 34 34 1951 2062 2226 2487 2226 2487 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12139 2226 2487 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12139 2226 2487 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12139 CON__P05787;P05787 37;37 CON__P05787 CON__P05787 Keratin, type II cytoskeletal 8 KRT8 sp|P05787|K2C8_HUMAN Keratin, type II cytoskeletal 8 OS=Homo sapiens GN=KRT8 PE=1 SV=7 0.46072 0 0.0114748 83.358 15.477 83.358 S SRSYTSGPGSRISSSSFSRVGSSNFRGGLGG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX IS(0.001)S(0.018)S(0.059)S(0.461)FS(0.461)R IS(-25.65)S(-13.98)S(-8.93)S(0)FS(0)R 5 2 -0.16628 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN + 40 24 37 37 1951 2062 2225 2486 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10746 2225 2486 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10746 2225 2486 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10746 CON__P05787;P05787 39;39 CON__P05787 CON__P05787 Keratin, type II cytoskeletal 8 KRT8 sp|P05787|K2C8_HUMAN Keratin, type II cytoskeletal 8 OS=Homo sapiens GN=KRT8 PE=1 SV=7 0.46072 0 0.0114748 83.358 15.477 83.358 S SYTSGPGSRISSSSFSRVGSSNFRGGLGGGY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IS(0.001)S(0.018)S(0.059)S(0.461)FS(0.461)R IS(-25.65)S(-13.98)S(-8.93)S(0)FS(0)R 7 2 -0.16628 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN + 41 24 39 39 1951 2062 2225 2486 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10746 2225 2486 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10746 2225 2486 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10746 CON__P05787;P05787 432;432 CON__P05787 CON__P05787 Keratin, type II cytoskeletal 8 KRT8 sp|P05787|K2C8_HUMAN Keratin, type II cytoskeletal 8 OS=Homo sapiens GN=KRT8 PE=1 SV=7 0.866962 8.19069 1.04349E-13 209.1 194.43 209.1 1 S SGYAGGLSSAYGGLTSPGLSYSLGSSFGSGA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP TTSGYAGGLSSAYGGLT(0.132)S(0.867)PGLS(0.001)YSLGSSFGSGAGSSSFSR T(-112.26)T(-112.26)S(-107.44)GY(-120.01)AGGLS(-67.25)S(-59.66)AY(-47.81)GGLT(-8.19)S(8.19)PGLS(-27.72)Y(-43.03)S(-48.52)LGS(-68.01)S(-73.14)FGS(-90.78)GAGS(-112.22)S(-116.83)S(-121.29)FS(-130.5)R 18 4 -0.43634 4547.7 0 0 10020 0 0 4528 0 0 9248.1 0 0 4663.4 0 0 3908.7 0 0 3718.4 0 0 9575.6 0 0 9396.2 0 0 106310 0 0 4303.2 0 0 9461.4 0 0 4560.5 0 0 9457 0 0 4716.5 0 0 4427.4 0 0 3985.8 0 0 12589 0 0 9030.5 0 0 100330 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 218980000 218980000 0 0 NaN + 42 24 432 432 4984 5313 5660;5661 6289;6290 5660 6289 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23030 5660 6289 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23030 5660 6289 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23030 CON__P05787;P05787 43;43 CON__P05787 CON__P05787 Keratin, type II cytoskeletal 8 KRT8 sp|P05787|K2C8_HUMAN Keratin, type II cytoskeletal 8 OS=Homo sapiens GN=KRT8 PE=1 SV=7 0.586731 1.52206 0.0020355 106.88 106.88 106.88 1 S GPGSRISSSSFSRVGSSNFRGGLGGGYGGAS X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX VGS(0.587)S(0.413)NFR VGS(1.52)S(-1.52)NFR 3 2 0.21896 11813 0 0 110330 0 0 13530 0 0 108270 0 0 12949 0 0 7028.2 0 0 10352 0 0 44465 0 0 119480 0 0 3749.6 0 0 11184 0 0 104210 0 0 13513 0 0 109670 0 0 13241 0 0 12040 0 0 13651 0 0 43264 0 0 113260 0 0 4559.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 112800000 112800000 0 0 NaN + 43 24 43 43 5126 5463 5819 6470 5819 6470 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9776 5819 6470 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9776 5819 6470 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9776 CON__P06868 365 CON__P06868 CON__P06868 0.737902 4.64699 3.60318E-05 119.43 85.421 119.43 1 S RWEYCTIPSCESSPLSTERMDVPVPPEQTPV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX WEYCTIPSCES(0.001)S(0.007)PLS(0.738)T(0.253)ER WEY(-88.2)CT(-72.04)IPS(-36.37)CES(-27.14)S(-19.99)PLS(4.65)T(-4.65)ER 15 3 -0.48434 17704 0 0 26988 0 0 21747 0 0 27582 0 0 20722 0 0 20551 0 0 26535 0 0 23687 0 0 30950 0 0 15596 0 0 16767 0 0 25498 0 0 21664 0 0 28171 0 0 21176 0 0 20982 0 0 26852 0 0 24108 0 0 30351 0 0 15233 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 141530000 141530000 0 0 NaN + 44 25 365 365 5335 5683 6061 6735 6061 6735 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19096 6061 6735 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19096 6061 6735 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19096 CON__P12763;P02765 138;138 CON__P12763 CON__P12763 Alpha-2-HS-glycoprotein;Alpha-2-HS-glycoprotein chain A;Alpha-2-HS-glycoprotein chain B AHSG sp|P02765|FETUA_HUMAN Alpha-2-HS-glycoprotein OS=Homo sapiens GN=AHSG PE=1 SV=1 0.999393 32.3279 2.69712E-05 133.71 111.52 133.71 1 S GQFSVLFTKCDSSPDSAEDVRKLCPDCPLLA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPXXXXXXXXX CDSS(0.001)PDS(0.999)AEDVRK CDS(-46.57)S(-32.33)PDS(32.33)AEDVRK 7 3 -0.088602 21836 0 0 12372 0 0 21209 0 0 11433 0 0 11840 0 0 20503 0 0 10754 0 0 14665 0 0 14341 0 0 4173.4 0 0 20660 0 0 11682 0 0 21276 0 0 11942 0 0 12556 0 0 20081 0 0 11097 0 0 15062 0 0 13998 0 0 4269.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29844000 29844000 0 0 NaN + 45 26 138 138 600 639 681 756 681 756 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8070 681 756 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8070 681 756 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8070 CON__P12763 320 CON__P12763 CON__P12763 0.999665 34.8499 2.69242E-17 246.77 223.21 246.77 1 S HRAHYDLRHTFSGVASVESSSGEAFHVGKTP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPXX HTFSGVAS(1)VESSSGEAFHVGK HT(-83.59)FS(-51.81)GVAS(34.85)VES(-34.85)S(-60.16)S(-75.48)GEAFHVGK 8 3 -0.86267 9979.3 0 0 9285 0 0 11460 0 0 9854 0 0 9264.2 0 0 13029 0 0 12991 0 0 12776 0 0 11828 0 0 110670 0 0 9448.5 0 0 8774.4 0 0 11434 0 0 10134 0 0 9582.5 0 0 13124 0 0 13013 0 0 16160 0 0 11720 0 0 104500 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 12932000 12932000 0 0 NaN + 46 26 320 320 1756 1855 2001 2230;2231 2001 2230 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16196 2001 2230 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16196 2001 2230 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16196 CON__REFSEQ:XP_585019 408 CON__REFSEQ:XP_585019 CON__REFSEQ:XP_585019 1 51.2675 0.0295364 51.268 14.934 51.268 1 S CYRHAENRFNETTEKSLKIVQRECEHFQNLG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX S(1)LKIVQR S(51.27)LKIVQR 1 3 0.30551 16661 0 0 8964.5 0 0 18252 0 0 10225 0 0 8383.9 0 0 16928 0 0 7592 0 0 12417 0 0 10005 0 0 1508.4 0 0 15772 0 0 8475.6 0 0 18165 0 0 10529 0 0 9081.7 0 0 16615 0 0 7832.1 0 0 12676 0 0 9769.3 0 0 1707.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8551300 8551300 0 0 NaN + 47 27 408 408 3946 4205 4487 4987 4487 4987 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12811 4487 4987 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12811 4487 4987 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12811 Q13765;E9PAV3 166;2029 Q13765 Q13765 Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form NACA sp|Q13765|NACA_HUMAN Nascent polypeptide-associated complex subunit alpha OS=Homo sapiens GN=NACA PE=1 SV=1;sp|E9PAV3|NACAM_HUMAN Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Homo sapiens GN=NACA PE=1 SV=1 0.999937 42.0134 2.67644E-18 228.86 206.43 228.86 1 S SNIQENTQTPTVQEESEEEEVDETGVEVKDI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPPXX VQGEAVSNIQENTQTPTVQEES(1)EEEEVDETGVEVK VQGEAVS(-164.16)NIQENT(-125.36)QT(-83)PT(-42.01)VQEES(42.01)EEEEVDET(-67.2)GVEVK 22 3 0.42294 370.73 0 0 534.9 0 0 885.94 0 0 925.63 0 0 521.94 0 0 901.9 0 0 485.36 0 0 4527.2 0 0 1598.3 0 0 116630 0 0 350.37 0 0 506.44 0 0 853.86 0 0 922.25 0 0 513.72 0 0 1170.2 0 0 505.45 0 0 7915 0 0 1529.8 0 0 109930 0 0 1 0 0 1 0 0 2 0 0 2 0 0 2 0 0 3 0 0 2 0 0 3 0 0 3 0 0 3 0 0 68890000 68890000 0 0 NaN 48 28 166 166 5222 5566 5931 6590;6591;6592 5931 6591 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17190 5931 6591 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17190 5931 6591 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17190 I3L1I5 94 I3L1I5 I3L1I5 Putative uncharacterized protein LOC100996504 sp|I3L1I5|YS060_HUMAN Putative uncharacterized protein LOC100996504 OS=Homo sapiens PE=5 SV=1 0.999997 55.7871 7.39696E-16 223.67 200.11 223.67 1 S SWERSRSCSESWRRLSLDASAVDEEPCLPRT X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX RLS(1)LDASAVDEEPCLPR RLS(55.79)LDAS(-55.79)AVDEEPCLPR 3 3 -0.78114 11020 0 0 6512.8 0 0 11218 0 0 7335.4 0 0 7180.1 0 0 12037 0 0 8019.8 0 0 9441.5 0 0 7545 0 0 9533.4 0 0 10429 0 0 6157.1 0 0 11236 0 0 7557.1 0 0 7536.2 0 0 11841 0 0 8110.1 0 0 9858.3 0 0 7464.8 0 0 9195.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 34506000 34506000 0 0 NaN 49 29 94 94 3328 3530 3767 4183 3767 4183 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17502 3767 4183 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17502 3767 4183 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17502 I3L1I5 85 I3L1I5 I3L1I5 Putative uncharacterized protein LOC100996504 sp|I3L1I5|YS060_HUMAN Putative uncharacterized protein LOC100996504 OS=Homo sapiens PE=5 SV=1 0.969895 16.5463 0.00061863 101.43 82.615 101.43 1 S GSQDLSRRRSWERSRSCSESWRRLSLDASAV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX S(0.008)RS(0.97)CS(0.021)ESWR S(-20.65)RS(16.55)CS(-16.55)ES(-35.59)WR 3 2 0.77818 19081 0 0 6952.3 0 0 19132 0 0 8223.4 0 0 8485.9 0 0 19223 0 0 7477.1 0 0 10990 0 0 6725.5 0 0 3213.8 0 0 18056 0 0 6574.8 0 0 19130 0 0 8542.7 0 0 9225.1 0 0 18680 0 0 7638.9 0 0 11440 0 0 6668 0 0 3280.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9447200 9447200 0 0 NaN 50 29 85 85 4275 4555 4855 5387 4855 5387 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6949 4855 5387 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6949 4855 5387 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6949 I3L1I5 155 I3L1I5 I3L1I5 Putative uncharacterized protein LOC100996504 sp|I3L1I5|YS060_HUMAN Putative uncharacterized protein LOC100996504 OS=Homo sapiens PE=5 SV=1 0.999932 41.6483 0.00014275 127.03 103.42 127.03 1 S PGKECDSPKKRGRSRSVPVSFYEIRSPEISP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX S(1)VPVSFYEIR S(41.65)VPVS(-41.65)FY(-85.4)EIR 1 2 0.56724 29971 0 0 9363.6 0 0 33843 0 0 10363 0 0 14388 0 0 33485 0 0 12697 0 0 20211 0 0 9210.7 0 0 22507 0 0 28375 0 0 8851.2 0 0 33614 0 0 10951 0 0 15722 0 0 32408 0 0 12911 0 0 21466 0 0 9236 0 0 21660 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 109830000 109830000 0 0 NaN 51 29 155 155 4307;4560 4592;4864 4893;5181 5436;5753 5181 5753 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20107 5181 5753 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20107 4893 5436 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16712 O00116 42 O00116 O00116 Alkyldihydroxyacetonephosphate synthase, peroxisomal AGPS sp|O00116|ADAS_HUMAN Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Homo sapiens GN=AGPS PE=1 SV=1 1 101.532 0.000173341 101.53 73.911 101.53 1 S RDPDPDRAGRRLRVLSGHLLGRPREALSTNE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX VLS(1)GHLLGRPR VLS(101.53)GHLLGRPR 3 3 -0.23983 13094 0 0 48844 0 0 12431 0 0 47639 0 0 12535 0 0 13028 0 0 11617 0 0 24455 0 0 48325 0 0 7689 0 0 12388 0 0 46135 0 0 12555 0 0 48431 0 0 12737 0 0 14761 0 0 12875 0 0 24319 0 0 46125 0 0 7806.1 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 95440000 95440000 0 0 NaN 52 30 42 42 5171;5172 5510;5511 5872;5873 6526;6527 5873 6527 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13865 5873 6527 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13865 5873 6527 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13865 O00148 183 O00148 O00148 ATP-dependent RNA helicase DDX39A DDX39A sp|O00148|DX39A_HUMAN ATP-dependent RNA helicase DDX39A OS=Homo sapiens GN=DDX39A PE=1 SV=2 0.999972 45.5174 0.000413769 128.35 79.288 128.35 1 S VVGTPGRILALVRNRSFSLKNVKHFVLDECD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX NRS(1)FSLK NRS(45.52)FS(-45.52)LK 3 3 0.011765 28495 0 0 15043 0 0 31387 0 0 14349 0 0 32207 0 0 26609 0 0 34500 0 0 26743 0 0 14543 0 0 1885.9 0 0 26974 0 0 14207 0 0 31453 0 0 14973 0 0 32649 0 0 26130 0 0 34461 0 0 26877 0 0 15196 0 0 2394.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 84877000 84877000 0 0 NaN 53 31 183 183 2906 3080 3298 3657 3298 3657 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12571 3298 3657 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12571 3298 3657 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12571 O00151 130 O00151 O00151 PDZ and LIM domain protein 1 PDLIM1 sp|O00151|PDLI1_HUMAN PDZ and LIM domain protein 1 OS=Homo sapiens GN=PDLIM1 PE=1 SV=4 0.995223 25.9063 1.40614E-22 263.62 227.23 133.61 1 S HIGSAHNRSAMPFTASPASSTTARVITNQYN X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPXXXXXXX SAMPFT(0.003)AS(0.995)PASS(0.002)TTAR S(-54.73)AMPFT(-25.91)AS(25.91)PAS(-35.92)S(-27.43)T(-37.92)T(-53.08)AR 8 2 1.7168 40459 0 0 27527 0 0 45118 0 0 26846 0 0 19971 0 0 43875 0 0 22190 0 0 30396 0 0 28237 0 0 24048 0 0 38302 0 0 26000 0 0 44860 0 0 27880 0 0 21788 0 0 43094 0 0 22646 0 0 31736 0 0 27605 0 0 23347 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 70882000 70882000 0 0 NaN 54 32 130 130 3589 3814;3815 4067;4068 4522;4523 4067 4522 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11054 4068 4523 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14821 4068 4523 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14821 O00151 90 O00151 O00151 PDZ and LIM domain protein 1 PDLIM1 sp|O00151|PDLI1_HUMAN PDZ and LIM domain protein 1 OS=Homo sapiens GN=PDLIM1 PE=1 SV=4 0.999841 37.9783 4.63968E-10 186.76 165.72 159.22 1 S DNLTLTVARSEHKVWSPLVTEEGKRHPYKMN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX VWS(1)PLVTEEGKR VWS(37.98)PLVT(-37.98)EEGKR 3 3 0.39261 38998 0 0 15936 0 0 39129 0 0 14473 0 0 16803 0 0 36052 0 0 19294 0 0 25316 0 0 16034 0 0 26895 0 0 36903 0 0 15046 0 0 39125 0 0 15296 0 0 18402 0 0 35089 0 0 19431 0 0 26620 0 0 15959 0 0 25910 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 115200000 115200000 0 0 NaN 55 32 90 90 5322;5323 5670;5671 6046;6047 6719;6720 6047 6720 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18634 6046 6719 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21073 6046 6719 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21073 O00159 408 O00159 O00159 Unconventional myosin-Ic MYO1C sp|O00159|MYO1C_HUMAN Unconventional myosin-Ic OS=Homo sapiens GN=MYO1C PE=1 SV=4 0.998652 28.6981 0.000979299 115.82 74.282 115.82 1 S LVGKINRSLASKDVESPSWRSTTVLGLLDIY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX DVES(0.999)PS(0.001)WR DVES(28.7)PS(-28.7)WR 4 2 -0.15377 19824 0 0 17064 0 0 22369 0 0 17677 0 0 11786 0 0 20333 0 0 11234 0 0 16927 0 0 19154 0 0 5133.9 0 0 18768 0 0 16123 0 0 22247 0 0 18155 0 0 12585 0 0 20229 0 0 11679 0 0 17266 0 0 18563 0 0 5225.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11498000 11498000 0 0 NaN 56 33 408 408 839 887 943 1038 943 1038 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12105 943 1038 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12105 943 1038 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12105 O00161 110 O00161 O00161 Synaptosomal-associated protein 23 SNAP23 sp|O00161|SNP23_HUMAN Synaptosomal-associated protein 23 OS=Homo sapiens GN=SNAP23 PE=1 SV=1 1 80.6657 5.54938E-08 171.13 140.64 171.13 1 S SGKAYKTTWGDGGENSPCNVVSKQPGPVTNG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPXXXXXXXX TTWGDGGENS(1)PCNVVSK T(-80.67)T(-80.67)WGDGGENS(80.67)PCNVVS(-110.8)K 10 3 1.2029 44827 0 0 45637 0 0 44893 0 0 44659 0 0 38615 0 0 48695 0 0 35872 0 0 42296 0 0 47429 0 0 29211 0 0 42418 0 0 43106 0 0 45119 0 0 45979 0 0 39529 0 0 48605 0 0 36962 0 0 43554 0 0 46308 0 0 28484 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 103380000 103380000 0 0 NaN 57 34 110 110 4995 5324 5673 6302;6303 5673 6302 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15205 5673 6302 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15205 5673 6302 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15205 O00178 25 O00178 O00178 GTP-binding protein 1 GTPBP1 sp|O00178|GTPB1_HUMAN GTP-binding protein 1 OS=Homo sapiens GN=GTPBP1 PE=1 SV=3 0.850382 7.54631 2.29001E-08 164.85 148.53 164.85 1 S MDSPVPASMFAPEPSSPGAARAAAAAARLHG Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX SAMDSPVPASMFAPEPS(0.15)S(0.85)PGAAR S(-118.44)AMDS(-109.59)PVPAS(-76.66)MFAPEPS(-7.55)S(7.55)PGAAR 18 3 0.19053 10631 0 0 13771 0 0 12304 0 0 15316 0 0 16217 0 0 9852.1 0 0 16241 0 0 15262 0 0 13814 0 0 34931 0 0 10066 0 0 13018 0 0 12342 0 0 15544 0 0 16224 0 0 10253 0 0 16464 0 0 16151 0 0 13733 0 0 33245 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 165380000 165380000 0 0 NaN 58 35 25 25 3588 3812;3813 4065;4066 4520;4521 4066 4521 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19869 4066 4521 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19869 4066 4521 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19869 O00193 17 O00193 O00193 Small acidic protein SMAP sp|O00193|SMAP_HUMAN Small acidic protein OS=Homo sapiens GN=SMAP PE=1 SV=1 0.992195 21.0422 5.40845E-24 253.83 219.45 253.83 1 S SAARESHPHGVKRSASPDDDLGSSNWEAADL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.008)AS(0.992)PDDDLGSSNWEAADLGNEER S(-21.04)AS(21.04)PDDDLGS(-80.28)S(-94.62)NWEAADLGNEER 3 2 -0.31494 2100.9 0 0 2399.5 0 0 1832.5 0 0 2545.1 0 0 3449.9 0 0 2396.8 0 0 2407.2 0 0 2808.1 0 0 2825.3 0 0 7280.5 0 0 1987 0 0 2267.5 0 0 1878.4 0 0 2601.9 0 0 3391.1 0 0 2427.9 0 0 2511.8 0 0 3020.2 0 0 2770 0 0 6920.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10364000 10364000 0 0 0.66546 59 36 17 17 3612 3840 4093 4550 4093 4550 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17250 4093 4550 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17250 4093 4550 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17250 O00203 276 O00203 O00203 AP-3 complex subunit beta-1 AP3B1 sp|O00203|AP3B1_HUMAN AP-3 complex subunit beta-1 OS=Homo sapiens GN=AP3B1 PE=1 SV=3 1 74.3863 4.40272E-05 127.83 112.94 127.83 1 S KEGDELEDNGKNFYESDDDQKEKTDKKKKPY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX NFYES(1)DDDQKEK NFY(-74.39)ES(74.39)DDDQKEK 5 3 -1.4968 22347 0 0 19259 0 0 21541 0 0 19565 0 0 16002 0 0 23501 0 0 16987 0 0 23306 0 0 20440 0 0 15767 0 0 21143 0 0 18195 0 0 21671 0 0 20133 0 0 16583 0 0 23408 0 0 17339 0 0 23861 0 0 20021 0 0 15386 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15348000 15348000 0 0 NaN 60 37 276 276 2813 2983 3196 3548 3196 3548 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12423 3196 3548 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12423 3196 3548 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12423 O00264 181 O00264 O00264 Membrane-associated progesterone receptor component 1 PGRMC1 sp|O00264|PGRC1_HUMAN Membrane-associated progesterone receptor component 1 OS=Homo sapiens GN=PGRMC1 PE=1 SV=3 0.999999 61.4327 1.6052E-31 299.4 265.28 299.4 1 S HVGKLLKEGEEPTVYSDEEEPKDESARKND_ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPPPPPXXXX EGEEPTVYS(1)DEEEPKDESAR EGEEPT(-61.43)VY(-159.66)S(61.43)DEEEPKDES(-70.18)AR 9 3 -0.038476 16034 0 0 39790 0 0 16159 0 0 38648 0 0 35483 0 0 16016 0 0 39796 0 0 32740 0 0 42002 0 0 21777 0 0 15172 0 0 37582 0 0 16509 0 0 39389 0 0 34930 0 0 17314 0 0 40363 0 0 32849 0 0 41349 0 0 21263 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 98869000 98869000 0 0 NaN 61 38 181 181 956;2438 1010;2576 1095;2770 1209;3093 1095 1209 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10864 1095 1209 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10864 1095 1209 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10864 O00267 666 O00267 O00267 Transcription elongation factor SPT5 SUPT5H sp|O00267|SPT5H_HUMAN Transcription elongation factor SPT5 OS=Homo sapiens GN=SUPT5H PE=1 SV=1 1 79.3745 5.78827E-07 140.51 124.99 140.51 1 S PRDVTNFTVGGFAPMSPRISSPMHPSAGGQR X;X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPXXXXXXXXXXXXX DVTNFTVGGFAPMS(1)PR DVT(-99.1)NFT(-79.37)VGGFAPMS(79.37)PR 14 3 -0.30218 10992 0 0 12300 0 0 10748 0 0 15306 0 0 12075 0 0 10712 0 0 11041 0 0 11588 0 0 16295 0 0 16221 0 0 10401 0 0 11637 0 0 10851 0 0 15458 0 0 12166 0 0 10984 0 0 11432 0 0 12079 0 0 15855 0 0 15542 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 98461000 98461000 0 0 NaN 62 39 666 666 844 892;893 948;949 1043;1044 949 1044 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21137 949 1044 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21137 949 1044 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21137 O00273 315 O00273 O00273 DNA fragmentation factor subunit alpha DFFA sp|O00273|DFFA_HUMAN DNA fragmentation factor subunit alpha OS=Homo sapiens GN=DFFA PE=1 SV=1 1 50.1551 8.20696E-11 187.86 159.21 50.155 1 S TQSLHSLRSISASKASPPGDLQNPKRARQDP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPXXXXXX AS(1)PPGDLQNPK AS(50.16)PPGDLQNPK 2 3 3.4371 24837 0 0 33009 0 0 24875 0 0 35347 0 0 26098 0 0 27315 0 0 30517 0 0 31441 0 0 38409 0 0 11879 0 0 23502 0 0 31195 0 0 25069 0 0 36021 0 0 26482 0 0 27812 0 0 31068 0 0 31735 0 0 37563 0 0 11913 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 32654000 32654000 0 0 NaN 63 40 315 315 483;3862 514;4115 553;4391 617;4885 553 617 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11737 4391 4885 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13184 4391 4885 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13184 O00303 258 O00303 O00303 Eukaryotic translation initiation factor 3 subunit F EIF3F sp|O00303|EIF3F_HUMAN Eukaryotic translation initiation factor 3 subunit F OS=Homo sapiens GN=EIF3F PE=1 SV=1 0.999137 30.6367 6.19622E-18 234.99 212.89 234.99 1 S DTERIGVDLIMKTCFSPNRVIGLSSDLQQVG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP T(0.001)CFS(0.999)PNRVIGLSSDLQQVGGASAR T(-30.64)CFS(30.64)PNRVIGLS(-106.62)S(-130.31)DLQQVGGAS(-186.9)AR 4 3 -0.29096 6077.9 0 0 8908.6 0 0 5835.1 0 0 8295.9 0 0 6664.5 0 0 6188.2 0 0 8521.2 0 0 8175.7 0 0 9717.6 0 0 22311 0 0 5750.3 0 0 8412.2 0 0 5903.2 0 0 8521.5 0 0 6741.5 0 0 6363.8 0 0 8617.4 0 0 8796 0 0 9537.6 0 0 21197 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25007000 25007000 0 0 NaN 64 42 258 258 4647 4958 5282 5868 5282 5868 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20768 5282 5868 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20768 5282 5868 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20768 O00308 211 O00308 O00308 NEDD4-like E3 ubiquitin-protein ligase WWP2 WWP2 sp|O00308|WWP2_HUMAN NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Homo sapiens GN=WWP2 PE=1 SV=2 0.999968 45.7344 0.012218 80.507 59.637 80.507 1 S HSGASARTTPATGEQSPGARSRHRQPVKNSG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPXXXXXXXXXXX TTPATGEQS(1)PGAR T(-54.98)T(-56.09)PAT(-45.73)GEQS(45.73)PGAR 9 2 0.62714 7394 0 0 5205 0 0 7279.2 0 0 5832.2 0 0 5073.3 0 0 8040.1 0 0 5746.1 0 0 6825.3 0 0 6961.5 0 0 2520.9 0 0 6996.2 0 0 4920.6 0 0 7310.6 0 0 5985.6 0 0 5289.3 0 0 7950 0 0 5850 0 0 6969.3 0 0 6817.3 0 0 2531.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9155600 9155600 0 0 NaN 65 43 211 211 4980 5309 5656 6285 5656 6285 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6157 5656 6285 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6157 5656 6285 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6157 O00418 462 O00418 O00418 Eukaryotic elongation factor 2 kinase EEF2K sp|O00418|EF2K_HUMAN Eukaryotic elongation factor 2 kinase OS=Homo sapiens GN=EEF2K PE=1 SV=2 0.723171 4.20656 0.0308253 48.822 35.314 48.822 1 S KRGELDDPEPREHGHSYSNRKYESDEDSLGS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX EHGHS(0.723)Y(0.002)S(0.275)NR EHGHS(4.21)Y(-24.97)S(-4.21)NR 5 3 0.37625 374.7 0 0 410.91 0 0 341.3 0 0 324.79 0 0 292.82 0 0 447.67 0 0 556.16 0 0 889.34 0 0 488.83 0 0 1448.1 0 0 354.44 0 0 387.68 0 0 345.49 0 0 340.72 0 0 303.67 0 0 451.5 0 0 551.63 0 0 918.59 0 0 485.19 0 0 1384.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 749000 749000 0 0 NaN 66 45 462 462 988 1043 1129 1246 1129 1246 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4254 1129 1246 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4254 1129 1246 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4254 O00418 445 O00418 O00418 Eukaryotic elongation factor 2 kinase EEF2K sp|O00418|EF2K_HUMAN Eukaryotic elongation factor 2 kinase OS=Homo sapiens GN=EEF2K PE=1 SV=2 1 78.972 1.77381E-31 308.36 249.21 308.36 1 S DNHRESENSGDSGYPSEKRGELDDPEPREHG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPXXXXXXXXXXXXX ESENSGDSGYPS(1)EK ES(-224.51)ENS(-143.44)GDS(-78.97)GY(-168.59)PS(78.97)EK 12 2 -0.06185 17728 0 0 16208 0 0 20014 0 0 15908 0 0 13099 0 0 21008 0 0 13786 0 0 16292 0 0 18114 0 0 1317.8 0 0 16784 0 0 15309 0 0 19938 0 0 16434 0 0 13715 0 0 20773 0 0 14118 0 0 16564 0 0 17689 0 0 1617.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19759000 19759000 0 0 NaN 67 45 445 445 1149 1209 1301 1432 1301 1432 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8736 1301 1432 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8736 1301 1432 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8736 O00418 18 O00418 O00418 Eukaryotic elongation factor 2 kinase EEF2K sp|O00418|EF2K_HUMAN Eukaryotic elongation factor 2 kinase OS=Homo sapiens GN=EEF2K PE=1 SV=2 1 180.299 5.76737E-10 180.3 122.51 180.3 1 S DEDLIFRLEGVDGGQSPRAGHDGDSDGDSDD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX LEGVDGGQS(1)PR LEGVDGGQS(180.3)PR 9 2 -0.15804 24112 0 0 24484 0 0 24429 0 0 23583 0 0 26108 0 0 20558 0 0 26244 0 0 23559 0 0 23752 0 0 7720.7 0 0 22817 0 0 23124 0 0 24601 0 0 24220 0 0 26395 0 0 20793 0 0 26639 0 0 23748 0 0 23542 0 0 7815.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 118020000 118020000 0 0 NaN 68 45 18 18 2328 2461 2650 2962 2650 2962 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10799 2650 2962 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10799 2650 2962 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10799 O00425 179 O00425 O00425 Insulin-like growth factor 2 mRNA-binding protein 3 IGF2BP3 sp|O00425|IF2B3_HUMAN Insulin-like growth factor 2 mRNA-binding protein 3 OS=Homo sapiens GN=IGF2BP3 PE=1 SV=2 0.532058 0 0.0252302 57.679 33.297 57.679 2 S PLQQPRGRRGLGQRGSSRQGSPGSVSKQKPC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPXXXX GS(0.532)S(0.532)RQGS(0.927)PGS(0.007)VS(0.001)K GS(0)S(0)RQGS(8.56)PGS(-21.16)VS(-29.5)K 2 3 0.11586 0 10685 0 0 14516 0 0 10128 0 0 14249 0 0 14541 0 0 9450.2 0 0 13515 0 0 14275 0 0 14526 0 0 3355.2 0 0 10109 0 0 13711 0 0 10283 0 0 14569 0 0 14483 0 0 9753.4 0 0 13834 0 0 14233 0 0 14290 0 0 3489.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 7516000 0 7516000 0 NaN 69 46 179 179 1640 1728 1867 2080 1867 2080 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7042 1867 2080 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7042 1867 2080 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7042 O00425 180 O00425 O00425 Insulin-like growth factor 2 mRNA-binding protein 3 IGF2BP3 sp|O00425|IF2B3_HUMAN Insulin-like growth factor 2 mRNA-binding protein 3 OS=Homo sapiens GN=IGF2BP3 PE=1 SV=2 0.532305 0 0.0252302 57.679 33.297 57.679 2 S LQQPRGRRGLGQRGSSRQGSPGSVSKQKPCD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GS(0.532)S(0.532)RQGS(0.927)PGS(0.007)VS(0.001)K GS(0)S(0)RQGS(8.56)PGS(-21.16)VS(-29.5)K 3 3 0.11586 0 10685 0 0 14516 0 0 10128 0 0 14249 0 0 14541 0 0 9450.2 0 0 13515 0 0 14275 0 0 14526 0 0 3355.2 0 0 10109 0 0 13711 0 0 10283 0 0 14569 0 0 14483 0 0 9753.4 0 0 13834 0 0 14233 0 0 14290 0 0 3489.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 7516000 0 7516000 0 NaN 70 46 180 180 1640 1728 1867 2080 1867 2080 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7042 1867 2080 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7042 1867 2080 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7042 O00425 184 O00425 O00425 Insulin-like growth factor 2 mRNA-binding protein 3 IGF2BP3 sp|O00425|IF2B3_HUMAN Insulin-like growth factor 2 mRNA-binding protein 3 OS=Homo sapiens GN=IGF2BP3 PE=1 SV=2 0.998993 29.9678 6.4506E-06 149.02 64.935 149.02 1;2 S RGRRGLGQRGSSRQGSPGSVSKQKPCDLPLR X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPXXXXXXXXX QGS(0.999)PGS(0.001)VSK QGS(29.97)PGS(-29.97)VS(-60.03)K 3 2 -0.23705 40249 10685 0 96595 14516 0 39622 10128 0 95750 14249 0 48908 14541 0 36743 9450.2 0 49403 13515 0 62680 14275 0 107260 14526 0 3671.4 3355.2 0 38083 10109 0 91245 13711 0 40048 10283 0 97417 14569 0 49146 14483 0 39795 9753.4 0 51849 13834 0 61978 14233 0 103380 14290 0 4907.7 3489.7 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 388710000 381200000 7516000 0 NaN 71 46 184 184 1640;3042 1728;3226 1867;3451 2080;3825 3451 3825 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7680 3451 3825 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7680 3451 3825 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7680 O00429 616 O00429 O00429 Dynamin-1-like protein DNM1L sp|O00429|DNM1L_HUMAN Dynamin-1-like protein OS=Homo sapiens GN=DNM1L PE=1 SV=2 1 70.414 9.69672E-05 117.29 95.421 117.29 1 S LLAEEKSKPIPIMPASPQKGHAVNLLDVPVP X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX SKPIPIMPAS(1)PQK S(-70.41)KPIPIMPAS(70.41)PQK 10 3 -0.30366 36292 0 0 46526 0 0 34703 0 0 48924 0 0 36370 0 0 36191 0 0 36349 0 0 39870 0 0 53135 0 0 25964 0 0 34335 0 0 43965 0 0 35056 0 0 49882 0 0 36826 0 0 36939 0 0 37461 0 0 40633 0 0 51717 0 0 25371 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 138060000 138060000 0 0 NaN 72 47 616 616 3892 4146;4147 4425;4426 4919;4920 4426 4920 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16457 4426 4920 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16457 4426 4920 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16457 O00443 259 O00443 O00443 Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha PIK3C2A sp|O00443|P3C2A_HUMAN Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha OS=Homo sapiens GN=PIK3C2A PE=1 SV=2 0.99995 43.0419 0.0243157 53.947 34.816 53.947 1 S TDLEITDSKVSNLQVSPKSEDISKFDWLDLD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX VSNLQVS(1)PK VS(-43.04)NLQVS(43.04)PK 7 3 0.27846 9578.9 0 0 10250 0 0 9262.7 0 0 9586.2 0 0 8259.6 0 0 10258 0 0 8037.8 0 0 8273.6 0 0 10872 0 0 820.83 0 0 9062.9 0 0 9678.8 0 0 9332.5 0 0 9894.1 0 0 8440.6 0 0 10229 0 0 8270 0 0 8400.6 0 0 10607 0 0 964.39 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8729700 8729700 0 0 NaN 73 48 259 259 5255 5601 5971 6635 5971 6635 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13839 5971 6635 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13839 5971 6635 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13839 O00459 263 O00459 O00459 Phosphatidylinositol 3-kinase regulatory subunit beta PIK3R2 sp|O00459|P85B_HUMAN Phosphatidylinositol 3-kinase regulatory subunit beta OS=Homo sapiens GN=PIK3R2 PE=1 SV=2 0.614396 2.02323 0.00372879 89.391 73.627 89.391 1 S ATFGPLLLRAPPPPSSPPPGGAPDGSEPSPD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPPPP APPPPS(0.386)S(0.614)PPPGGAPDGSEPSPDFPALLVEK APPPPS(-2.02)S(2.02)PPPGGAPDGS(-46.8)EPS(-54.15)PDFPALLVEK 7 4 -0.86211 15749 0 0 15825 0 0 16479 0 0 19111 0 0 8496.2 0 0 18429 0 0 6747.5 0 0 14383 0 0 20445 0 0 30676 0 0 14905 0 0 14968 0 0 16450 0 0 19411 0 0 9081.5 0 0 18510 0 0 7327.5 0 0 15508 0 0 19592 0 0 29218 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 41032000 41032000 0 0 NaN 74 49 263 263 363 389 421 466 421 466 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23332 421 466 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23332 421 466 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23332 O00470 196 O00470 O00470 Homeobox protein Meis1 MEIS1 sp|O00470|MEIS1_HUMAN Homeobox protein Meis1 OS=Homo sapiens GN=MEIS1 PE=1 SV=1 0.657065 5.56375 0.0105059 70.837 50.745 70.837 1 S MPIDLVIDDREGGSKSDSEDITRSANLTDQP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPXXXXXXXX EGGS(0.16)KS(0.657)DS(0.182)EDITR EGGS(-6.13)KS(5.56)DS(-5.56)EDIT(-32.58)R 6 3 0.48662 21691 0 0 14960 0 0 23309 0 0 17476 0 0 27089 0 0 26053 0 0 28046 0 0 22923 0 0 15913 0 0 4421.5 0 0 20531 0 0 14146 0 0 23426 0 0 17928 0 0 27269 0 0 25701 0 0 28170 0 0 23248 0 0 16215 0 0 4693.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 40392000 40392000 0 0 NaN 75 50 196 196 962 1016 1101 1216 1101 1216 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7744 1101 1216 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7744 1101 1216 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7744 O00559 36 O00559 O00559 Receptor-binding cancer antigen expressed on SiSo cells EBAG9 sp|O00559|RCAS1_HUMAN Receptor-binding cancer antigen expressed on SiSo cells OS=Homo sapiens GN=EBAG9 PE=1 SV=1 0.977948 16.4687 4.53002E-11 182.95 143.02 182.95 1 S FLKRLICRSGRGRKLSGDQITLPTTVDYSSV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP KLS(0.978)GDQIT(0.022)LPTTVDYSSVPK KLS(16.47)GDQIT(-16.47)LPT(-72.01)T(-90.12)VDY(-125.46)S(-131.61)S(-139)VPK 3 3 0.41274 8895.2 0 0 10197 0 0 9130.7 0 0 9727.9 0 0 9363.3 0 0 8065.2 0 0 11216 0 0 12152 0 0 9626.5 0 0 16836 0 0 8418.1 0 0 9630 0 0 9186.9 0 0 9990.2 0 0 9512.9 0 0 8241.3 0 0 11284 0 0 12539 0 0 9565.9 0 0 16134 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 162620000 162620000 0 0 NaN 76 53 36 36 2126 2247 2420 2697 2420 2697 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19871 2420 2697 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19871 2420 2697 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19871 O00567 520 O00567 O00567 Nucleolar protein 56 NOP56 sp|O00567|NOP56_HUMAN Nucleolar protein 56 OS=Homo sapiens GN=NOP56 PE=1 SV=4 0.893997 9.2602 5.83768E-11 181.26 161.65 181.26 1 S KPKKKKSFSKEELMSSDLEETAGSTSIPKRK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPXX EELMS(0.106)S(0.894)DLEETAGSTSIPK EELMS(-9.26)S(9.26)DLEET(-77.76)AGS(-132.94)T(-139.4)S(-145.62)IPK 6 3 -0.3518 14686 0 0 14104 0 0 13984 0 0 13535 0 0 14549 0 0 14213 0 0 14463 0 0 15150 0 0 15405 0 0 32929 0 0 13894 0 0 13321 0 0 14128 0 0 13943 0 0 14731 0 0 14290 0 0 14752 0 0 16153 0 0 15160 0 0 31357 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 25021000 25021000 0 0 NaN 77 54 520 520 930 984 1068 1179;1180 1068 1179 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19387 1068 1179 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19387 1068 1179 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19387 O00567 591 O00567 O00567 Nucleolar protein 56 NOP56 sp|O00567|NOP56_HUMAN Nucleolar protein 56 OS=Homo sapiens GN=NOP56 PE=1 SV=4 1 62.4075 0.0230104 62.408 48.638 62.408 1 S VGKSSSKKKKKFHKASQED____________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX FHKAS(1)QED FHKAS(62.41)QED 5 2 0.77321 32205 0 0 28130 0 0 31467 0 0 27563 0 0 68051 0 0 33055 0 0 68203 0 0 45417 0 0 28051 0 0 5287.5 0 0 30471 0 0 26570 0 0 32176 0 0 28423 0 0 66863 0 0 33052 0 0 68318 0 0 45236 0 0 29380 0 0 6030 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 32468000 32468000 0 0 NaN 78 54 591 591 1272 1339 1441 1598 1441 1598 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8895 1441 1598 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8895 1441 1598 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8895 O00567 570 O00567 O00567 Nucleolar protein 56 NOP56 sp|O00567|NOP56_HUMAN Nucleolar protein 56 OS=Homo sapiens GN=NOP56 PE=1 SV=4 0.788249 5.70851 3.20458E-07 147.41 130.72 147.41 1 S GSKKKRKFSKEEPVSSGPEEAVGKSSSKKKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPXXXXXXX FSKEEPVS(0.212)S(0.788)GPEEAVGK FS(-51.17)KEEPVS(-5.71)S(5.71)GPEEAVGK 9 3 -0.63679 8942.2 0 0 13912 0 0 8057.5 0 0 13788 0 0 9378.3 0 0 8615.1 0 0 8609.9 0 0 12445 0 0 15491 0 0 20288 0 0 8458.3 0 0 13142 0 0 8179 0 0 14082 0 0 9434.8 0 0 8952.5 0 0 8989.5 0 0 12946 0 0 14993 0 0 19392 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18029000 18029000 0 0 NaN 79 54 570 570 1321 1394 1500 1662 1500 1662 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15228 1500 1662 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15228 1500 1662 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15228 O00567 314 O00567 O00567 Nucleolar protein 56 NOP56 sp|O00567|NOP56_HUMAN Nucleolar protein 56 OS=Homo sapiens GN=NOP56 PE=1 SV=4 0.98027 16.9621 3.18376E-07 157.8 109.1 157.8 1 S LIGEAVGARLIAHAGSLTNLAKYPASTVQIL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPXXXXXXXXX LIAHAGS(0.98)LT(0.02)NLAK LIAHAGS(16.96)LT(-16.96)NLAK 7 3 0.25589 11287 0 0 6839.7 0 0 12113 0 0 7657.9 0 0 11053 0 0 11200 0 0 11158 0 0 9573.7 0 0 7532 0 0 17352 0 0 10683 0 0 6465.9 0 0 12136 0 0 7869.9 0 0 11277 0 0 11081 0 0 11254 0 0 10189 0 0 7585.6 0 0 16560 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16187000 16187000 0 0 NaN 80 54 314 314 2402 2539 2732 3052 2732 3052 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18874 2732 3052 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18874 2732 3052 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18874 O00571;O15523 594;592 O00571 O00571 ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y DDX3X;DDX3Y sp|O00571|DDX3X_HUMAN ATP-dependent RNA helicase DDX3X OS=Homo sapiens GN=DDX3X PE=1 SV=3;sp|O15523|DDX3Y_HUMAN ATP-dependent RNA helicase DDX3Y OS=Homo sapiens GN=DDX3Y PE=1 SV=2 1 98.7299 0.00301939 98.73 54.011 98.73 1 S HYKGSSRGRSKSSRFSGGFGARDYRQSSGAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPXXXXXXXXX FS(1)GGFGAR FS(98.73)GGFGAR 2 2 -0.82306 9608.7 0 0 12743 0 0 10619 0 0 14586 0 0 11131 0 0 10670 0 0 11730 0 0 12172 0 0 13500 0 0 2699.1 0 0 9096.1 0 0 12048 0 0 10642 0 0 14801 0 0 11276 0 0 10894 0 0 11959 0 0 12233 0 0 13245 0 0 2823.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 40201000 40201000 0 0 NaN 81 56 594 594 1320 1393 1499 1661 1499 1661 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14829 1499 1661 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14829 1499 1661 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14829 O00571 90 O00571 O00571 ATP-dependent RNA helicase DDX3X DDX3X sp|O00571|DDX3X_HUMAN ATP-dependent RNA helicase DDX3X OS=Homo sapiens GN=DDX3X PE=1 SV=3 0.861251 7.92913 7.56795E-05 119.96 91.413 119.96 1 S RSDSRGKSSFFSDRGSGSRGRFDDRGRSDYD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPXXXXXXXXXXXX SSFFSDRGS(0.861)GS(0.139)R S(-85.58)S(-81.3)FFS(-53.3)DRGS(7.93)GS(-7.93)R 9 3 0.56326 10278 0 0 17566 0 0 10096 0 0 16554 0 0 13693 0 0 9957.6 0 0 14205 0 0 15080 0 0 17605 0 0 3911.2 0 0 9724.5 0 0 16588 0 0 10221 0 0 16953 0 0 13694 0 0 10347 0 0 14528 0 0 15046 0 0 17227 0 0 4031.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 199590000 199590000 0 0 NaN 82 56 90 90 4341 4627 4930 5474 4930 5474 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11955 4930 5474 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11955 4930 5474 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11955 O14497 1944 O14497 O14497 AT-rich interactive domain-containing protein 1A ARID1A sp|O14497|ARI1A_HUMAN AT-rich interactive domain-containing protein 1A OS=Homo sapiens GN=ARID1A PE=1 SV=3 0.99998 47.0925 0.000136645 105.17 84.394 105.17 1 S SSEAIKESSKFPFGISPAQSHRNIKILEDEP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX FPFGIS(1)PAQSHR FPFGIS(47.09)PAQS(-47.09)HR 6 3 -0.20276 3318.2 0 0 3652.5 0 0 3575.6 0 0 4384.1 0 0 3162.6 0 0 3184.1 0 0 3652.5 0 0 3911.9 0 0 4397.8 0 0 2887.3 0 0 3140.9 0 0 3454.5 0 0 3581.5 0 0 4437.5 0 0 3241.4 0 0 3259.7 0 0 3714.9 0 0 3982.7 0 0 4307.7 0 0 2809.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13602000 13602000 0 0 NaN 83 57 1944 1944 1299 1370 1474 1634 1474 1634 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19085 1474 1634 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19085 1474 1634 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19085 O14497 696 O14497 O14497 AT-rich interactive domain-containing protein 1A ARID1A sp|O14497|ARI1A_HUMAN AT-rich interactive domain-containing protein 1A OS=Homo sapiens GN=ARID1A PE=1 SV=3 0.727155 4.2571 3.76819E-07 142.74 117.89 142.74 1 S FSPHTSPHLPGIRGPSPSPVGSPASVAQSRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX GPS(0.727)PS(0.273)PVGSPASVAQSR GPS(4.26)PS(-4.26)PVGS(-107.67)PAS(-127.45)VAQS(-137.04)R 3 3 0.18272 15530 0 0 15137 0 0 13778 0 0 16413 0 0 14665 0 0 13784 0 0 15641 0 0 13644 0 0 15126 0 0 4767.8 0 0 14689 0 0 14306 0 0 13987 0 0 16733 0 0 14843 0 0 13941 0 0 15860 0 0 13835 0 0 14946 0 0 4805.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 101680000 101680000 0 0 NaN 84 57 696 696 1565 1649 1782 1980 1782 1980 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11030 1782 1980 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11030 1782 1980 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11030 O14497 772 O14497 O14497 AT-rich interactive domain-containing protein 1A ARID1A sp|O14497|ARI1A_HUMAN AT-rich interactive domain-containing protein 1A OS=Homo sapiens GN=ARID1A PE=1 SV=3 0.965244 14.4402 6.51062E-05 104.89 80.334 103.74 1 S PQMPQYSSPQPGSALSPRQPSGGQIHTGMGS X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX NPQMPQYSSPQPGS(0.035)ALS(0.965)PR NPQMPQY(-70.6)S(-61.55)S(-44.77)PQPGS(-14.44)ALS(14.44)PR 17 3 -0.53696 21632 0 0 27752 0 0 23162 0 0 27417 0 0 23734 0 0 23757 0 0 24657 0 0 26736 0 0 26926 0 0 34102 0 0 20475 0 0 26214 0 0 23244 0 0 28112 0 0 24066 0 0 24077 0 0 25117 0 0 27730 0 0 26471 0 0 32729 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 65162000 65162000 0 0 NaN 85 57 772 772 2888 3061;3062 3278;3279 3634;3635 3279 3635 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14006 3278 3634 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11494 3279 3635 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14006 O14497 233 O14497 O14497 AT-rich interactive domain-containing protein 1A ARID1A sp|O14497|ARI1A_HUMAN AT-rich interactive domain-containing protein 1A OS=Homo sapiens GN=ARID1A PE=1 SV=3 0.823145 6.6786 1.72097E-08 174.97 150.44 174.97 1 S NRSAYPPPAPAYALSSPRGGTPGSGAAAAAG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPXXXXXXXXXXXXX SAYPPPAPAYALS(0.177)S(0.823)PR S(-154.04)AY(-147.48)PPPAPAY(-100.19)ALS(-6.68)S(6.68)PR 14 3 0.49372 6379.9 0 0 6622.7 0 0 6693.1 0 0 7102.8 0 0 5130.7 0 0 5472.3 0 0 5256.1 0 0 5732.7 0 0 5835.2 0 0 4072.1 0 0 6038.2 0 0 6259 0 0 6702.6 0 0 7237.4 0 0 5301.3 0 0 5568.9 0 0 5360.1 0 0 5862.9 0 0 5733.1 0 0 3967.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14748000 14748000 0 0 NaN 86 57 233 233 3637 3867 4121 4578 4121 4578 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15647 4121 4578 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15647 4121 4578 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15647 O14497 1184 O14497 O14497 AT-rich interactive domain-containing protein 1A ARID1A sp|O14497|ARI1A_HUMAN AT-rich interactive domain-containing protein 1A OS=Homo sapiens GN=ARID1A PE=1 SV=3 0.999983 47.705 1.37416E-16 233.42 195.18 233.42 1 S PHSQIPPLPGMSRSNSVGIQDAFNDGSDSTF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP SNS(1)VGIQDAFNDGSDSTFQKR S(-47.7)NS(47.7)VGIQDAFNDGS(-92.06)DS(-121.58)T(-121.58)FQKR 3 3 -0.18991 17576 0 0 16411 0 0 16956 0 0 17710 0 0 21338 0 0 15818 0 0 20892 0 0 20512 0 0 19159 0 0 67877 0 0 16629 0 0 15510 0 0 17162 0 0 18075 0 0 21387 0 0 16126 0 0 21241 0 0 22439 0 0 18977 0 0 64389 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 65347000 65347000 0 0 NaN 87 57 1184 1184 4067;4068 4337;4338 4627;4628 5140;5141 4628 5141 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16740 4628 5141 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16740 4628 5141 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16740 O14497 1751 O14497 O14497 AT-rich interactive domain-containing protein 1A ARID1A sp|O14497|ARI1A_HUMAN AT-rich interactive domain-containing protein 1A OS=Homo sapiens GN=ARID1A PE=1 SV=3 0.999881 39.2537 0.0105855 67.115 31.47 67.115 1 S VGDPGQRTLLDPGRFSKVSSPAPMEGGEEEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPXXXXXXXXXXXXXX TLLDPGRFS(1)K T(-39.25)LLDPGRFS(39.25)K 9 3 -1.2694 16361 0 0 9911.6 0 0 17926 0 0 8814.2 0 0 12717 0 0 17353 0 0 12139 0 0 12878 0 0 10055 0 0 3453.5 0 0 15487 0 0 9356.9 0 0 17895 0 0 9254.3 0 0 13203 0 0 16963 0 0 12327 0 0 13195 0 0 10010 0 0 3549.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24918000 24918000 0 0 NaN 88 57 1751 1751 4773 5090 5423 6031 5423 6031 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17407 5423 6031 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17407 5423 6031 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17407 O14497 382 O14497 O14497 AT-rich interactive domain-containing protein 1A ARID1A sp|O14497|ARI1A_HUMAN AT-rich interactive domain-containing protein 1A OS=Homo sapiens GN=ARID1A PE=1 SV=3 0.986555 18.7325 9.69738E-05 117.53 103.57 117.53 1 S SGGGGQPLARTPQPSSPMDQMGKMRPQPYGG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPXXXXXXXX TPQPS(0.013)S(0.987)PMDQMGK T(-36.21)PQPS(-18.73)S(18.73)PMDQMGK 6 3 -0.99486 16517 0 0 16097 0 0 17171 0 0 16330 0 0 16091 0 0 16453 0 0 15042 0 0 16455 0 0 19246 0 0 5788.2 0 0 15632 0 0 15208 0 0 17237 0 0 16755 0 0 16382 0 0 16497 0 0 15477 0 0 16680 0 0 18812 0 0 5831.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29852000 29852000 0 0 NaN 89 57 382 382 4837 5162 5501 6119 5501 6119 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13400 5501 6119 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13400 5501 6119 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13400 O14497 1600 O14497 O14497 AT-rich interactive domain-containing protein 1A ARID1A sp|O14497|ARI1A_HUMAN AT-rich interactive domain-containing protein 1A OS=Homo sapiens GN=ARID1A PE=1 SV=3 0.525478 0.45467 6.40913E-07 146.64 118.34 46.159 2 S VSSPAPLPRPMENRTSPSKSPFLHSGMKMQK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPXXX T(0.475)S(0.525)PS(0.598)KS(0.399)PFLHS(0.003)GMK T(-0.45)S(0.45)PS(1.78)KS(-1.78)PFLHS(-23.52)GMK 2 3 -0.066911 0 10524 0 0 14976 0 0 10162 0 0 15793 0 0 9566.1 0 0 11686 0 0 7477 0 0 13636 0 0 16983 0 0 16357 0 0 9957 0 0 14152 0 0 10242 0 0 16100 0 0 9722.3 0 0 11952 0 0 7971.6 0 0 14096 0 0 16354 0 0 15717 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 9167900 0 9167900 0 NaN 90 57 1600 1600 4944 5270;5271;5272 5614 6239 5614 6239 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13507 5615 6240 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14280 5615 6240 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14280 O14497 1602 O14497 O14497 AT-rich interactive domain-containing protein 1A ARID1A sp|O14497|ARI1A_HUMAN AT-rich interactive domain-containing protein 1A OS=Homo sapiens GN=ARID1A PE=1 SV=3 0.598356 1.77655 0.0319289 46.159 17.346 46.159 2 S SPAPLPRPMENRTSPSKSPFLHSGMKMQKAG X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX T(0.475)S(0.525)PS(0.598)KS(0.399)PFLHS(0.003)GMK T(-0.45)S(0.45)PS(1.78)KS(-1.78)PFLHS(-23.52)GMK 4 3 -0.066911 0 10524 0 0 14976 0 0 10162 0 0 15793 0 0 9566.1 0 0 11686 0 0 7477 0 0 13636 0 0 16983 0 0 16357 0 0 9957 0 0 14152 0 0 10242 0 0 16100 0 0 9722.3 0 0 11952 0 0 7971.6 0 0 14096 0 0 16354 0 0 15717 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 9167900 0 9167900 0 NaN 91 57 1602 1602 4944 5270;5271;5272 5614 6239 5614 6239 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13507 5614 6239 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13507 5614 6239 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13507 O14497 1755 O14497 O14497 AT-rich interactive domain-containing protein 1A ARID1A sp|O14497|ARI1A_HUMAN AT-rich interactive domain-containing protein 1A OS=Homo sapiens GN=ARID1A PE=1 SV=3 0.629225 2.29695 4.22815E-05 115.99 100.9 115.99 1 S GQRTLLDPGRFSKVSSPAPMEGGEEEEELLG X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP VS(0.371)S(0.629)PAPMEGGEEEEELLGPK VS(-2.3)S(2.3)PAPMEGGEEEEELLGPK 3 3 0.4895 6856.3 0 0 7339.4 0 0 6492.2 0 0 8751.4 0 0 7353.7 0 0 6895.7 0 0 6085.1 0 0 9181.2 0 0 7540.6 0 0 21891 0 0 6486.4 0 0 6941.4 0 0 6566.3 0 0 8869.7 0 0 7395.1 0 0 7064.6 0 0 6294.8 0 0 9780.5 0 0 7378.5 0 0 20826 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17374000 17374000 0 0 NaN 92 57 1755 1755 5275 5622 5993 6659 5993 6659 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19351 5993 6659 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19351 5993 6659 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19351 O14526 372 O14526 O14526 F-BAR domain only protein 1 FCHO1 sp|O14526|FCHO1_HUMAN F-BAR domain only protein 1 OS=Homo sapiens GN=FCHO1 PE=1 SV=2 1 126.955 9.95878E-05 126.96 105.39 126.96 1 S FYVHIKPAPARAPACSPEAAAAQLRATAGSL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPXXXXXX APACS(1)PEAAAAQLR APACS(126.96)PEAAAAQLR 5 2 0.4634 37444 0 0 30622 0 0 34929 0 0 28933 0 0 29986 0 0 37283 0 0 31182 0 0 32833 0 0 27613 0 0 35256 0 0 35422 0 0 28918 0 0 35257 0 0 29945 0 0 30735 0 0 37008 0 0 31586 0 0 34169 0 0 27397 0 0 33958 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 20747000 20747000 0 0 NaN 93 58 372 372 349 375 407 448;449 407 448 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13131 407 448 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13131 407 448 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13131 O14526 570 O14526 O14526 F-BAR domain only protein 1 FCHO1 sp|O14526|FCHO1_HUMAN F-BAR domain only protein 1 OS=Homo sapiens GN=FCHO1 PE=1 SV=2 0.999828 37.6362 0.0142029 66.953 49.222 66.953 1 S EGLAAPPRRLRSRKVSCPLTRSNGDLSRSLS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY) XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX KVS(1)CPLTR KVS(37.64)CPLT(-37.64)R 3 3 -0.42296 34380 0 0 18199 0 0 34835 0 0 20247 0 0 9786.2 0 0 37263 0 0 11719 0 0 20801 0 0 19444 0 0 2641.9 0 0 32534 0 0 17203 0 0 34748 0 0 20938 0 0 11445 0 0 36389 0 0 12047 0 0 21582 0 0 18858 0 0 2969.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 56680000 56680000 0 0 NaN 94 58 570 570 2266 2395 2578 2881 2578 2881 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9999 2578 2881 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9999 2578 2881 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9999 O14526 585 O14526 O14526 F-BAR domain only protein 1 FCHO1 sp|O14526|FCHO1_HUMAN F-BAR domain only protein 1 OS=Homo sapiens GN=FCHO1 PE=1 SV=2 0.600259 1.80702 3.81887E-07 142.55 101.06 142.55 1 S SCPLTRSNGDLSRSLSPSPLGSSAASTALER Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP SLS(0.6)PS(0.396)PLGS(0.003)S(0.001)AASTALER S(-33.58)LS(1.81)PS(-1.81)PLGS(-23.51)S(-28.49)AAS(-49.6)T(-60.56)ALER 3 2 0.014877 7220.2 0 0 6056.9 0 0 8966.1 0 0 5645.5 0 0 3781.7 0 0 8800 0 0 4937.9 0 0 8458.4 0 0 5471.6 0 0 39727 0 0 6838.7 0 0 5719.4 0 0 8866.7 0 0 5872.4 0 0 4160.6 0 0 8750.4 0 0 4985.5 0 0 9694.7 0 0 5376.2 0 0 37604 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6318700 6318700 0 0 NaN 95 58 585 585 3998 4263 4551 5059 4551 5059 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17044 4551 5059 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17044 4551 5059 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17044 O14545 327 O14545 O14545 TRAF-type zinc finger domain-containing protein 1 TRAFD1 sp|O14545|TRAD1_HUMAN TRAF-type zinc finger domain-containing protein 1 OS=Homo sapiens GN=TRAFD1 PE=1 SV=1 0.999697 35.1986 5.83168E-16 234.09 205.02 234.09 1 S CNPSRALPSLNTGSSSPRGVEEPDVIFQNFL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPXXXXXXXXXXXXX ALPSLNTGSSS(1)PR ALPS(-159.8)LNT(-101.14)GS(-61.9)S(-35.2)S(35.2)PR 11 2 0.27346 19794 0 0 30822 0 0 20906 0 0 31009 0 0 16457 0 0 18802 0 0 15067 0 0 23422 0 0 32582 0 0 16949 0 0 18734 0 0 29117 0 0 20930 0 0 31631 0 0 16961 0 0 19481 0 0 15884 0 0 23825 0 0 31406 0 0 16501 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 567700000 567700000 0 0 NaN 96 59 327 327 304 325 346 386 346 386 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14417 346 386 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14417 346 386 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14417 O14545 415 O14545 O14545 TRAF-type zinc finger domain-containing protein 1 TRAFD1 sp|O14545|TRAD1_HUMAN TRAF-type zinc finger domain-containing protein 1 OS=Homo sapiens GN=TRAFD1 PE=1 SV=1 0.964985 14.4028 3.1174E-10 179.33 102.07 179.33 1 S VTEGIPRLDSQPQETSPELPRRRVRHQGDLS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPXXXXXXXXXX LDSQPQET(0.035)S(0.965)PELPR LDS(-60.75)QPQET(-14.4)S(14.4)PELPR 9 2 0.68258 16093 0 0 17583 0 0 14751 0 0 16695 0 0 7062.3 0 0 16037 0 0 8766.4 0 0 12765 0 0 19052 0 0 8868.7 0 0 15223 0 0 16605 0 0 14840 0 0 17185 0 0 7654.7 0 0 16080 0 0 9123.3 0 0 13198 0 0 18362 0 0 8646.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 202400000 202400000 0 0 NaN 97 59 415 415 2319 2452 2641 2952 2641 2952 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13552 2641 2952 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13552 2641 2952 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13552 O14646 1677 O14646 O14646 Chromodomain-helicase-DNA-binding protein 1 CHD1 sp|O14646|CHD1_HUMAN Chromodomain-helicase-DNA-binding protein 1 OS=Homo sapiens GN=CHD1 PE=1 SV=2 0.994762 23.2605 6.49493E-07 151.41 104.54 151.41 1 S SDWQMDHRASSSGPRSPLDQRSPYGSRSPFE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPXXXXXXXXXX ASS(0.001)S(0.005)GPRS(0.995)PLDQR AS(-46)S(-32.84)S(-23.26)GPRS(23.26)PLDQR 8 2 0.32463 12719 0 0 15115 0 0 11385 0 0 15029 0 0 9235 0 0 12777 0 0 10674 0 0 12802 0 0 15152 0 0 1927.6 0 0 12031 0 0 14278 0 0 11517 0 0 15400 0 0 9523.2 0 0 12912 0 0 10918 0 0 12899 0 0 14760 0 0 2111.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 41968000 41968000 0 0 NaN 98 60 1677 1677 508 540 580 647 580 647 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6645 580 647 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6645 580 647 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6645 O14646 1622 O14646 O14646 Chromodomain-helicase-DNA-binding protein 1 CHD1 sp|O14646|CHD1_HUMAN Chromodomain-helicase-DNA-binding protein 1 OS=Homo sapiens GN=CHD1 PE=1 SV=2 0.999994 52.556 0.00589903 82.663 51.435 82.663 1 S LDDHRSRDHRSNLEGSLKDRSHSDHRSHSDH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX SNLEGS(1)LKDR S(-52.56)NLEGS(52.56)LKDR 6 3 -0.13292 13926 0 0 13531 0 0 16482 0 0 15848 0 0 14168 0 0 13230 0 0 15649 0 0 14713 0 0 15238 0 0 1869.8 0 0 13187 0 0 12796 0 0 16424 0 0 16089 0 0 14535 0 0 13400 0 0 15847 0 0 14757 0 0 15053 0 0 2101.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26400000 26400000 0 0 NaN 99 60 1622 1622 4045 4314 4603 5113 4603 5113 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10369 4603 5113 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10369 4603 5113 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10369 O14681 320 O14681 O14681 Etoposide-induced protein 2.4 homolog EI24 sp|O14681|EI24_HUMAN Etoposide-induced protein 2.4 homolog OS=Homo sapiens GN=EI24 PE=1 SV=4 0.738492 4.78897 9.88251E-05 110.75 96.186 110.75 1 S FHKTVYLQSALSSSTSAEKFPSPHPSPAKLK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPXXXXXXXXXXXX TVYLQSALSS(0.004)S(0.012)T(0.245)S(0.738)AEK T(-90.12)VY(-100.37)LQS(-74.22)ALS(-41.63)S(-22.57)S(-17.82)T(-4.79)S(4.79)AEK 13 3 -1.8742 4824.5 0 0 4785.9 0 0 4377.7 0 0 4407.1 0 0 5260.2 0 0 4162 0 0 5675 0 0 5213.2 0 0 4634.9 0 0 12640 0 0 4563.6 0 0 4518.9 0 0 4445.4 0 0 4544.2 0 0 5290.9 0 0 4219.7 0 0 5728.2 0 0 5569.3 0 0 4617.4 0 0 12023 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6083200 6083200 0 0 NaN 100 61 320 320 5027 5361 5713 6352 5713 6352 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18133 5713 6352 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18133 5713 6352 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18133 O14683 14 O14683 O14683 Tumor protein p53-inducible protein 11 TP53I11 sp|O14683|P5I11_HUMAN Tumor protein p53-inducible protein 11 OS=Homo sapiens GN=TP53I11 PE=1 SV=2 0.90444 9.76103 1.4231E-09 178.22 134.54 178.22 1 S __MAAKQPPPLMKKHSQTDLVSRLKTRKILG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX KHS(0.904)QT(0.096)DLVSR KHS(9.76)QT(-9.76)DLVS(-75.71)R 3 3 -0.55497 37535 0 0 14793 0 0 40990 0 0 13234 0 0 13390 0 0 39762 0 0 15582 0 0 23157 0 0 12765 0 0 5463.4 0 0 35530 0 0 13965 0 0 40742 0 0 14110 0 0 15246 0 0 38473 0 0 15679 0 0 24037 0 0 12715 0 0 5680.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 77113000 77113000 0 0 NaN 101 62 14 14 2089 2210 2379 2651 2379 2651 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7020 2379 2651 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7020 2379 2651 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7020 O14686 4738 O14686 O14686 Histone-lysine N-methyltransferase 2D KMT2D sp|O14686|KMT2D_HUMAN Histone-lysine N-methyltransferase 2D OS=Homo sapiens GN=KMT2D PE=1 SV=2 1 189.432 4.17391E-10 189.43 118.62 189.43 1 S PHLGSGRWEQEDRALSPVIPLIPRASIPVFP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX ALS(1)PVIPLIPR ALS(189.43)PVIPLIPR 3 2 0.14285 143630 0 0 215500 0 0 144340 0 0 202030 0 0 215750 0 0 135890 0 0 238120 0 0 205220 0 0 207410 0 0 34883 0 0 135910 0 0 203500 0 0 146220 0 0 207200 0 0 215010 0 0 140090 0 0 240470 0 0 204210 0 0 205950 0 0 37596 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 506100000 506100000 0 0 NaN 102 63 4738 4738 317 338 361 401 361 401 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23624 361 401 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23624 361 401 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23624 O14686 2274 O14686 O14686 Histone-lysine N-methyltransferase 2D KMT2D sp|O14686|KMT2D_HUMAN Histone-lysine N-methyltransferase 2D OS=Homo sapiens GN=KMT2D PE=1 SV=2 1 67.7735 7.50263E-12 212.5 180 212.5 1 S ESPGVGGGKASEPLLSPPPFGESRKALEVKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPXXXXXXX ASEPLLS(1)PPPFGESR AS(-67.77)EPLLS(67.77)PPPFGES(-89.25)R 7 2 -0.36649 8207.2 0 0 9881.6 0 0 6759 0 0 10663 0 0 8472.2 0 0 7793.3 0 0 10240 0 0 10227 0 0 12054 0 0 41953 0 0 7760.7 0 0 9339.2 0 0 6913.5 0 0 10855 0 0 8523.2 0 0 8049.2 0 0 10388 0 0 11428 0 0 11817 0 0 39740 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20743000 20743000 0 0 NaN 103 63 2274 2274 453 482 517 579 517 579 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19181 517 579 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19181 517 579 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19181 O14686 4822 O14686 O14686 Histone-lysine N-methyltransferase 2D KMT2D sp|O14686|KMT2D_HUMAN Histone-lysine N-methyltransferase 2D OS=Homo sapiens GN=KMT2D PE=1 SV=2 1 82.5002 0.000134212 108.71 75.024 108.71 1 S LSMKIPNSYEVLFPESPARAGTEPKKGEAEG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX IPNSYEVLFPES(1)PAR IPNS(-86.17)Y(-82.5)EVLFPES(82.5)PAR 12 3 -0.076974 2009.9 0 0 2442.3 0 0 2329.8 0 0 3194.6 0 0 2208 0 0 1846.6 0 0 2751.4 0 0 2655.2 0 0 2835.3 0 0 11783 0 0 1903.1 0 0 2311.4 0 0 2327.2 0 0 3212.5 0 0 2255.6 0 0 1943.4 0 0 2776.9 0 0 2987.1 0 0 2794 0 0 11157 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7983600 7983600 0 0 NaN 104 63 4822 4822 1910 2018 2179 2439 2179 2439 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22243 2179 2439 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22243 2179 2439 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22243 O14686 1606 O14686 O14686 Histone-lysine N-methyltransferase 2D KMT2D sp|O14686|KMT2D_HUMAN Histone-lysine N-methyltransferase 2D OS=Homo sapiens GN=KMT2D PE=1 SV=2 0.99873 28.9559 0.000370506 105.03 52.782 105.03 1 S WLTETGMALLRNLTMSPLHKRRQRRGRLGLP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX NLT(0.001)MS(0.999)PLHK NLT(-28.96)MS(28.96)PLHK 5 3 -0.27115 9224 0 0 10576 0 0 9246.5 0 0 9189.2 0 0 7930 0 0 8833.6 0 0 8915.1 0 0 9268.2 0 0 9416.6 0 0 1442.4 0 0 8728.3 0 0 9983.2 0 0 9295.1 0 0 9514.1 0 0 8139.5 0 0 8878.4 0 0 9041.2 0 0 9323.3 0 0 9270.1 0 0 1572.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24701000 24701000 0 0 NaN 105 63 1606 1606 2868 3039 3254 3610 3254 3610 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15303 3254 3610 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15303 3254 3610 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15303 O14686 3130 O14686 O14686 Histone-lysine N-methyltransferase 2D KMT2D sp|O14686|KMT2D_HUMAN Histone-lysine N-methyltransferase 2D OS=Homo sapiens GN=KMT2D PE=1 SV=2 0.999586 33.8289 1.25611E-07 157.83 123.11 157.83 1 S LPEVKPKVEEGGRHPSPCQFTIATPKVEPAP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPXXXXX VEEGGRHPS(1)PCQFTIATPK VEEGGRHPS(33.83)PCQFT(-33.83)IAT(-100.4)PK 9 4 -0.98234 8722.8 0 0 11432 0 0 9141.2 0 0 12714 0 0 8681.6 0 0 9085.8 0 0 7300.6 0 0 9465.5 0 0 10567 0 0 5858.3 0 0 8255.6 0 0 10806 0 0 9172.4 0 0 12918 0 0 8820.8 0 0 9284.9 0 0 7587.2 0 0 9656.4 0 0 10288 0 0 5735.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17360000 17360000 0 0 NaN 106 63 3130 3130 5088 5423 5775 6419 5775 6419 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14432 5775 6419 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14432 5775 6419 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14432 O14686 4359 O14686 O14686 Histone-lysine N-methyltransferase 2D KMT2D sp|O14686|KMT2D_HUMAN Histone-lysine N-methyltransferase 2D OS=Homo sapiens GN=KMT2D PE=1 SV=2 1 66.036 0.000232798 101.17 79.611 101.17 1 S PKPQGPTLEPPPGRVSPAAAQLADTLFSKGL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPXX VS(1)PAAAQLADTLFSK VS(66.04)PAAAQLADT(-66.04)LFS(-96.41)K 2 3 0.91303 7852.5 0 0 6026.2 0 0 6280.2 0 0 5113.6 0 0 5285.2 0 0 6402.6 0 0 5898.2 0 0 6761.8 0 0 7492.5 0 0 21080 0 0 7424.6 0 0 5687.6 0 0 6403.1 0 0 5326.9 0 0 5432.4 0 0 6404.3 0 0 6018.1 0 0 7403.9 0 0 7325.2 0 0 20006 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 48391000 48391000 0 0 NaN 107 63 4359 4359 5256 5602 5972 6636 5972 6636 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23773 5972 6636 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23773 5972 6636 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23773 O14745 280 O14745 O14745 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 SLC9A3R1 sp|O14745|NHRF1_HUMAN Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Homo sapiens GN=SLC9A3R1 PE=1 SV=4 1 177.323 1.15995E-10 177.32 151.46 177.32 1 S QKENSREALAEAALESPRPALVRSASSDTSE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPXXXXXXXX EALAEAALES(1)PRPALVR EALAEAALES(177.32)PRPALVR 10 3 -0.50023 11414 0 0 16057 0 0 16340 0 0 17067 0 0 24100 0 0 13232 0 0 25360 0 0 18933 0 0 21466 0 0 11241 0 0 10819 0 0 15174 0 0 16268 0 0 17401 0 0 24012 0 0 13527 0 0 25647 0 0 19109 0 0 21345 0 0 11023 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 131560000 131560000 0 0 NaN 108 64 280 280 875 928 1005 1111 1005 1111 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17499 1005 1111 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17499 1005 1111 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17499 O14757 316 O14757 O14757 Serine/threonine-protein kinase Chk1 CHEK1 sp|O14757|CHK1_HUMAN Serine/threonine-protein kinase Chk1 OS=Homo sapiens GN=CHEK1 PE=1 SV=2 0.457842 0 0.00262409 97.456 63.496 97.456 S SPVNSASSEENVKYSSSQPEPRTGLSLWDTS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX YS(0.084)S(0.458)S(0.458)QPEPR Y(-56.43)S(-7.35)S(0)S(0)QPEPR 3 2 0.91733 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 109 65 316 316 5445 5801 6195 6895 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7087 6195 6895 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7087 6195 6895 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7087 O14757 317 O14757 O14757 Serine/threonine-protein kinase Chk1 CHEK1 sp|O14757|CHK1_HUMAN Serine/threonine-protein kinase Chk1 OS=Homo sapiens GN=CHEK1 PE=1 SV=2 0.457842 0 0.00262409 97.456 63.496 97.456 S PVNSASSEENVKYSSSQPEPRTGLSLWDTSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX YS(0.084)S(0.458)S(0.458)QPEPR Y(-56.43)S(-7.35)S(0)S(0)QPEPR 4 2 0.91733 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 110 65 317 317 5445 5801 6195 6895 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7087 6195 6895 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7087 6195 6895 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7087 O14828 32 O14828 O14828 Secretory carrier-associated membrane protein 3 SCAMP3 sp|O14828|SCAM3_HUMAN Secretory carrier-associated membrane protein 3 OS=Homo sapiens GN=SCAMP3 PE=1 SV=3 1 91.819 2.6066E-07 141.44 124.91 141.44 1 S LDNPFQDPAVIQHRPSRQYATLDVYNPFETR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPXXXXXXXXXXXXXX DGGNPFAEPSELDNPFQDPAVIQHRPS(1)R DGGNPFAEPS(-91.82)ELDNPFQDPAVIQHRPS(91.82)R 27 4 0.081652 2819.5 0 0 3653.9 0 0 2781.1 0 0 3342 0 0 2833.1 0 0 3261.7 0 0 3286.1 0 0 2583.7 0 0 3094.9 0 0 14150 0 0 2667.8 0 0 3450 0 0 2804.1 0 0 3449.2 0 0 2878.1 0 0 3291.1 0 0 3318 0 0 3044.3 0 0 3061.9 0 0 13384 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14069000 14069000 0 0 NaN 111 67 32 32 676 720 768 849 768 849 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20054 768 849 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20054 768 849 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20054 O14828 76 O14828 O14828 Secretory carrier-associated membrane protein 3 SCAMP3 sp|O14828|SCAM3_HUMAN Secretory carrier-associated membrane protein 3 OS=Homo sapiens GN=SCAMP3 PE=1 SV=3 0.972502 15.4858 0.000761167 112.94 61.502 112.94 1 S LPPPSAPSLQPSRKLSPTEPKNYGSYSTQAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX KLS(0.973)PT(0.027)EPK KLS(15.49)PT(-15.49)EPK 3 3 0.19007 58608 0 0 42054 0 0 62638 0 0 44199 0 0 28535 0 0 62441 0 0 33082 0 0 47528 0 0 50893 0 0 5506.4 0 0 55473 0 0 39739 0 0 62432 0 0 45544 0 0 31052 0 0 61597 0 0 33944 0 0 48418 0 0 49461 0 0 6284.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 81946000 81946000 0 0 NaN 112 67 76 76 2131 2252 2425 2702 2425 2702 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11040 2425 2702 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11040 2425 2702 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11040 O14828 85 O14828 O14828 Secretory carrier-associated membrane protein 3 SCAMP3 sp|O14828|SCAM3_HUMAN Secretory carrier-associated membrane protein 3 OS=Homo sapiens GN=SCAMP3 PE=1 SV=3 0.87559 8.49856 2.81221E-05 123.62 99.581 123.62 1 S QPSRKLSPTEPKNYGSYSTQASAAAATAELL X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP NYGS(0.876)YS(0.124)T(0.001)QASAAAATAELLK NY(-40.19)GS(8.5)Y(-41.62)S(-8.5)T(-32.07)QAS(-63.96)AAAAT(-106.47)AELLK 4 3 -0.49759 6331.2 0 0 6936.6 0 0 6624.1 0 0 6735.1 0 0 6504.6 0 0 7438.7 0 0 6469.6 0 0 7078.8 0 0 8473.4 0 0 17726 0 0 5992.1 0 0 6551.6 0 0 6651.8 0 0 6939 0 0 6609.3 0 0 7453.7 0 0 6642.1 0 0 7648.6 0 0 8275.7 0 0 16855 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12271000 12271000 0 0 NaN 113 67 85 85 2966 3145 3367 3732 3367 3732 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22176 3367 3732 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22176 3367 3732 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22176 O14874 31 O14874 O14874 [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial BCKDK sp|O14874|BCKD_HUMAN [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Homo sapiens GN=BCKDK PE=1 SV=2 0.987423 19.0554 1.21497E-31 305.9 284.29 305.9 1 S PLRPLLGPALALRARSTSATDTHHVEMARER X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPXX S(0.987)T(0.012)SATDTHHVEMAR S(19.06)T(-19.06)S(-35.12)AT(-79.84)DT(-124.21)HHVEMAR 1 3 -0.86117 10366 0 0 9960.4 0 0 11613 0 0 9132.1 0 0 11342 0 0 12928 0 0 17605 0 0 14110 0 0 9239.7 0 0 3714.2 0 0 9814 0 0 9404.5 0 0 11630 0 0 9488.1 0 0 11607 0 0 12810 0 0 17391 0 0 14220 0 0 9471.6 0 0 3823.9 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 66842000 66842000 0 0 NaN 114 68 31 31 4517 4813;4814 5126;5127 5692;5693 5127 5693 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6200 5127 5693 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6200 5127 5693 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6200 O14893 81 O14893 O14893 Gem-associated protein 2 GEMIN2 sp|O14893|GEMI2_HUMAN Gem-associated protein 2 OS=Homo sapiens GN=GEMIN2 PE=1 SV=1 0.999679 34.9402 7.05956E-46 337.63 319.65 337.63 1 S VVVAQIDPKKLKRKQSVNISLSGCQPAPEGY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP KQS(1)VNISLSGCQPAPEGYSPTLQWQQQQVAQFSTVR KQS(34.94)VNIS(-34.94)LS(-61.57)GCQPAPEGY(-178.64)S(-174.55)PT(-197.92)LQWQQQQVAQFS(-329.49)T(-332.44)VR 3 4 -0.45184 4027.2 0 0 2355.6 0 0 5159.7 0 0 3744.5 0 0 3576.2 0 0 3096.1 0 0 5027.3 0 0 5766.1 0 0 4115.2 0 0 69073 0 0 3815 0 0 2233.2 0 0 5113.8 0 0 3749.6 0 0 3742.3 0 0 3295.9 0 0 5022.7 0 0 7761.6 0 0 4099.2 0 0 65174 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 47511000 47511000 0 0 NaN 115 69 81 81 2189 2313 2490 2772;2773 2490 2772 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21089 2490 2772 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21089 2490 2772 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21089 O14920 672 O14920 O14920 Inhibitor of nuclear factor kappa-B kinase subunit beta IKBKB sp|O14920|IKKB_HUMAN Inhibitor of nuclear factor kappa-B kinase subunit beta OS=Homo sapiens GN=IKBKB PE=1 SV=1 0.998388 27.9234 8.59203E-23 271.47 235.7 271.47 1 S LLKIACSKVRGPVSGSPDSMNASRLSQPGQL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPXXXXXXX GPVS(0.002)GS(0.998)PDSMNASR GPVS(-27.92)GS(27.92)PDS(-58.98)MNAS(-118)R 6 2 -1.8745 18779 0 0 10567 0 0 18111 0 0 8783.9 0 0 11713 0 0 19995 0 0 11603 0 0 14998 0 0 12145 0 0 6940.9 0 0 17767 0 0 9971.8 0 0 18197 0 0 9307.9 0 0 12263 0 0 19492 0 0 11831 0 0 15447 0 0 11960 0 0 6882.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18904000 18904000 0 0 NaN 116 70 672 672 1571 1655 1789 1987 1789 1987 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8947 1789 1987 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8947 1789 1987 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8947 O14929 361 O14929 O14929 Histone acetyltransferase type B catalytic subunit HAT1 sp|O14929|HAT1_HUMAN Histone acetyltransferase type B catalytic subunit OS=Homo sapiens GN=HAT1 PE=1 SV=1 0.999999 62.6861 0.000775378 121.6 27.294 121.6 1 S EQYRSYRLDIKRRLISPYKKKQRDLAKMRKC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX RLIS(1)PYK RLIS(62.69)PY(-62.69)K 4 3 -0.2845 59519 0 0 106770 0 0 60975 0 0 102640 0 0 43517 0 0 62409 0 0 50032 0 0 74946 0 0 111300 0 0 6618.3 0 0 56325 0 0 100840 0 0 61113 0 0 104990 0 0 45342 0 0 64521 0 0 52293 0 0 74890 0 0 107220 0 0 7966.5 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 198730000 198730000 0 0 NaN 117 71 361 361 2411;3312;3313 2548;3513;3514 2741;3750;3751 3061;4166;4167 3750 4166 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14054 3750 4166 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14054 3750 4166 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14054 P19105;O14950;P24844 19;20;20 P19105 P19105 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 MYL12A;MYL12B;MYL9 sp|P19105|ML12A_HUMAN Myosin regulatory light chain 12A OS=Homo sapiens GN=MYL12A PE=1 SV=2;sp|O14950|ML12B_HUMAN Myosin regulatory light chain 12B OS=Homo sapiens GN=MYL12B PE=1 SV=2;sp|P24844|MYL9_HUMAN Myosin regulatory light polypeptide 9 OS=Homo sapie 0.853444 7.6517 6.62655E-32 319.52 283.54 319.52 1 S KRTKTKTKKRPQRATSNVFAMFDQSQIQEFK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP AT(0.147)S(0.853)NVFAMFDQSQIQEFK AT(-7.65)S(7.65)NVFAMFDQS(-126.48)QIQEFK 3 3 0.38131 388940 0 0 75182 0 0 405790 0 0 78628 0 0 398820 0 0 395720 0 0 399320 0 0 322690 0 0 81336 0 0 89108 0 0 368100 0 0 71041 0 0 407560 0 0 85618 0 0 404850 0 0 381750 0 0 397740 0 0 329200 0 0 93741 0 0 91374 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 1134000000 1134000000 0 0 NaN 118 72 19 19 534 567;568 608;609 680;681 609 681 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23819 609 681 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23819 609 681 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23819 O14974 910 O14974 O14974 Protein phosphatase 1 regulatory subunit 12A PPP1R12A sp|O14974|MYPT1_HUMAN Protein phosphatase 1 regulatory subunit 12A OS=Homo sapiens GN=PPP1R12A PE=1 SV=1 0.782062 5.78939 0.0193403 64.266 42.759 64.266 1 S TSAGDRYDSLLGRSGSYSYLEERKPYSSRLE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX S(0.206)GS(0.782)Y(0.003)S(0.008)YLEER S(-5.79)GS(5.79)Y(-23.93)S(-19.67)Y(-37.82)LEER 3 2 -0.12182 28329 0 0 37455 0 0 29073 0 0 38551 0 0 37198 0 0 31347 0 0 39541 0 0 48030 0 0 39728 0 0 421180 0 0 26809 0 0 35389 0 0 29336 0 0 39401 0 0 37302 0 0 32744 0 0 40142 0 0 60222 0 0 39192 0 0 397700 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 365630000 365630000 0 0 NaN 119 73 910 910 3824 4076 4349 4831;4832 4349 4831 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12985 4349 4831 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12985 4349 4831 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12985 O15014 758 O15014 O15014 Zinc finger protein 609 ZNF609 sp|O15014|ZN609_HUMAN Zinc finger protein 609 OS=Homo sapiens GN=ZNF609 PE=1 SV=2 1 52.0715 0.0403289 52.071 24.742 52.071 1 S SPLTPGKVCRAEEGKSPFRESSGDGMKMEGL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX AEEGKS(1)PFR AEEGKS(52.07)PFR 6 2 0.62778 22765 0 0 31213 0 0 22771 0 0 32595 0 0 23671 0 0 23256 0 0 20922 0 0 30479 0 0 36138 0 0 86921 0 0 21542 0 0 29493 0 0 22935 0 0 33233 0 0 23944 0 0 23981 0 0 21845 0 0 32912 0 0 35012 0 0 82552 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12264000 12264000 0 0 NaN 120 74 758 758 134 140 151 170 151 170 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9885 151 170 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9885 151 170 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9885 O15014 1055 O15014 O15014 Zinc finger protein 609 ZNF609 sp|O15014|ZN609_HUMAN Zinc finger protein 609 OS=Homo sapiens GN=ZNF609 PE=1 SV=2 0.994709 22.7414 0.000666894 102.4 58.083 102.4 1 S WKQKPSIPPTLTKAPSLTDLVKSGPGKAKEP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX APS(0.995)LT(0.005)DLVK APS(22.74)LT(-22.74)DLVK 3 2 -0.16203 11888 0 0 19448 0 0 11643 0 0 20053 0 0 22754 0 0 12124 0 0 21325 0 0 19707 0 0 21263 0 0 25865 0 0 11248 0 0 18376 0 0 11871 0 0 20425 0 0 22415 0 0 12650 0 0 21774 0 0 20253 0 0 20983 0 0 24811 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 46617000 46617000 0 0 NaN 121 74 1055 1055 368 394 428 476 428 476 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20325 428 476 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20325 428 476 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20325 O15014 560 O15014 O15014 Zinc finger protein 609 ZNF609 sp|O15014|ZN609_HUMAN Zinc finger protein 609 OS=Homo sapiens GN=ZNF609 PE=1 SV=2 0.991466 20.6512 0.0238963 64.42 30.682 64.42 1 S LGSCNGASVSQKGSLSPARSATPKVRLVEPH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX GS(0.009)LS(0.991)PAR GS(-20.65)LS(20.65)PAR 4 2 0.23899 12525 0 0 15562 0 0 11753 0 0 14090 0 0 16457 0 0 12040 0 0 14954 0 0 14891 0 0 14997 0 0 2499.6 0 0 11849 0 0 14692 0 0 11933 0 0 14524 0 0 16402 0 0 12200 0 0 15295 0 0 14902 0 0 14796 0 0 2698.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 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43657000 43657000 0 0 NaN 125 74 1313 1313 3910 4168 4449 4947 4449 4947 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9597 4449 4947 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9597 4449 4947 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9597 O15014 467 O15014 O15014 Zinc finger protein 609 ZNF609 sp|O15014|ZN609_HUMAN Zinc finger protein 609 OS=Homo sapiens GN=ZNF609 PE=1 SV=2 0.780015 5.54878 1.46545E-10 185.23 149.58 185.23 1 S SSSEDSKGSKRVRTNSMGSATGPLPGTKVEP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX T(0.217)NS(0.78)MGS(0.003)ATGPLPGTK T(-5.55)NS(5.55)MGS(-24.77)AT(-76.52)GPLPGT(-173.99)K 3 3 0.46862 21248 0 0 28053 0 0 22954 0 0 25404 0 0 35428 0 0 21397 0 0 39002 0 0 28694 0 0 26889 0 0 12562 0 0 20112 0 0 26485 0 0 23175 0 0 26181 0 0 35255 0 0 21741 0 0 39197 0 0 28878 0 0 27045 0 0 12493 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 81220000 81220000 0 0 NaN 126 74 467 467 4812 5133;5134 5472;5473 6090;6091 5473 6091 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14041 5473 6091 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14041 5473 6091 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14041 O15027 1905 O15027 O15027 Protein transport protein Sec16A SEC16A sp|O15027|SC16A_HUMAN Protein transport protein Sec16A OS=Homo sapiens GN=SEC16A PE=1 SV=3 0.99995 43.4544 5.9139E-11 180.84 159.22 180.84 1 S WDRADSGPTQPPLSLSPAPETKRPGQAAKKE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPXXXXXXXXX ADSGPTQPPLSLS(1)PAPETK ADS(-125.59)GPT(-114.32)QPPLS(-43.45)LS(43.45)PAPET(-52.88)K 13 3 0.27727 12121 0 0 10050 0 0 11417 0 0 11437 0 0 11724 0 0 12329 0 0 10035 0 0 12018 0 0 10852 0 0 18319 0 0 11467 0 0 9501.9 0 0 11538 0 0 11673 0 0 11856 0 0 12348 0 0 10318 0 0 12619 0 0 10673 0 0 17528 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 97940000 97940000 0 0 NaN 127 75 1905 1905 119 125 134 149 134 149 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16440 134 149 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16440 134 149 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16440 O15027 891 O15027 O15027 Protein transport protein Sec16A SEC16A sp|O15027|SC16A_HUMAN Protein transport protein Sec16A OS=Homo sapiens GN=SEC16A PE=1 SV=3 1 155.115 1.16239E-07 155.11 139.99 155.11 1 S LERAQQELVPPQQQASPPQLPKAMFSELSNP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPXXXXXXXXX AQQELVPPQQQAS(1)PPQLPK AQQELVPPQQQAS(155.11)PPQLPK 13 3 -0.099865 19208 0 0 18871 0 0 20989 0 0 19474 0 0 19558 0 0 19813 0 0 19007 0 0 22585 0 0 19553 0 0 42896 0 0 18182 0 0 17830 0 0 21014 0 0 19964 0 0 19924 0 0 19960 0 0 19389 0 0 23839 0 0 19270 0 0 40914 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 55050000 55050000 0 0 NaN 128 75 891 891 398 426 461 511;512 461 512 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16640 461 512 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16640 461 512 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16640 O15027 417 O15027 O15027 Protein transport protein Sec16A SEC16A sp|O15027|SC16A_HUMAN Protein transport protein Sec16A OS=Homo sapiens GN=SEC16A PE=1 SV=3 0.825262 7.29848 9.30696E-12 185.28 173.75 185.28 1 S VSQNYRGSVSQPSTPSPPKPTGIFQTSANSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPPPPPP GSVSQPS(0.02)T(0.154)PS(0.825)PPKPTGIFQTSANSSFEPVK GS(-49.53)VS(-34.48)QPS(-16.05)T(-7.3)PS(7.3)PPKPT(-35.91)GIFQT(-83.27)S(-100.33)ANS(-119.5)S(-125.62)FEPVK 10 4 -0.60744 4634.1 0 0 3847.1 0 0 5323.2 0 0 3487.5 0 0 4461.6 0 0 4104.2 0 0 4782.8 0 0 4600.3 0 0 3531.6 0 0 17136 0 0 4387.6 0 0 3632.2 0 0 5310.6 0 0 3612.7 0 0 4581.8 0 0 4124.8 0 0 4818.8 0 0 5111.6 0 0 3537.7 0 0 16242 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9963200 9963200 0 0 NaN 129 75 417 417 1647 1738 1879 2096 1879 2096 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19602 1879 2096 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19602 1879 2096 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19602 O15027 136 O15027 O15027 Protein transport protein Sec16A SEC16A sp|O15027|SC16A_HUMAN Protein transport protein Sec16A OS=Homo sapiens GN=SEC16A PE=1 SV=3 1 114.641 0.000113729 114.64 85.3 114.64 1 S ESTFRQNPRIVNHWASPELRQNPGVKNEHRP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX IVNHWAS(1)PELR IVNHWAS(114.64)PELR 7 3 -0.17931 6777.1 0 0 6579.9 0 0 5906.9 0 0 5954.5 0 0 6358.8 0 0 7330.6 0 0 6537.4 0 0 6598.8 0 0 7416.8 0 0 7818.9 0 0 6409.6 0 0 6212.2 0 0 6003.8 0 0 6174.1 0 0 6429.6 0 0 7291.9 0 0 6670 0 0 6883 0 0 7280.9 0 0 7515.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12282000 12282000 0 0 NaN 130 75 136 136 1977 2090 2254 2517 2254 2517 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16335 2254 2517 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16335 2254 2517 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16335 O15027 1786 O15027 O15027 Protein transport protein Sec16A SEC16A sp|O15027|SC16A_HUMAN Protein transport protein Sec16A OS=Homo sapiens GN=SEC16A PE=1 SV=3 0.999993 52.5455 0.00675001 83.312 70.52 83.312 1 S LLPSAPQTLPDGPLASPARVPMFPVPLPPGP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX LLPSAPQTLPDGPLAS(1)PAR LLPS(-58.09)APQT(-52.55)LPDGPLAS(52.55)PAR 16 3 0.21943 5243.5 0 0 2864.9 0 0 6351 0 0 2598 0 0 3536.4 0 0 5662.6 0 0 3019.6 0 0 5531.1 0 0 3652.3 0 0 31021 0 0 4965.8 0 0 2704.8 0 0 6296 0 0 2733 0 0 3748.3 0 0 5595.9 0 0 3115.8 0 0 6487.9 0 0 3576.8 0 0 29338 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27396000 27396000 0 0 NaN 131 75 1786 1786 2450 2588 2782 3109 2782 3109 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21282 2782 3109 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21282 2782 3109 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21282 O15027 391 O15027 O15027 Protein transport protein Sec16A SEC16A sp|O15027|SC16A_HUMAN Protein transport protein Sec16A OS=Homo sapiens GN=SEC16A PE=1 SV=3 0.858302 7.82278 2.32533E-16 216.85 199.48 216.85 1 S PEDEASGSFFKQIDSSPVGGETDETTVSQNY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP QIDS(0.142)S(0.858)PVGGETDETTVSQNYR QIDS(-7.82)S(7.82)PVGGET(-97.16)DET(-141.48)T(-141.48)VS(-154.34)QNY(-203.58)R 5 3 -0.44717 8817.4 0 0 8817.6 0 0 9036.5 0 0 7810.2 0 0 8230.4 0 0 8529.2 0 0 7395 0 0 8887.6 0 0 8445.8 0 0 17370 0 0 8344.4 0 0 8324 0 0 9075.2 0 0 8092.3 0 0 8389 0 0 8554.4 0 0 7596.3 0 0 9424.4 0 0 8288.9 0 0 16561 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27877000 27877000 0 0 NaN 132 75 391 391 3047 3233 3459 3833 3459 3833 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12510 3459 3833 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12510 3459 3833 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12510 O15027 1045 O15027 O15027 Protein transport protein Sec16A SEC16A sp|O15027|SC16A_HUMAN Protein transport protein Sec16A OS=Homo sapiens GN=SEC16A PE=1 SV=3 0.888623 9.01921 0.0078078 85.274 60.134 85.274 1 S AYAQNYRYPEPERPSSRASHSSERPPPRQGY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPXXXXXXXXXXXXXX YPEPERPS(0.111)S(0.889)R Y(-78.25)PEPERPS(-9.02)S(9.02)R 9 2 0.64998 15027 0 0 10761 0 0 14855 0 0 11333 0 0 14281 0 0 17081 0 0 13767 0 0 13976 0 0 10553 0 0 5005.1 0 0 14219 0 0 10169 0 0 14960 0 0 11694 0 0 14516 0 0 16835 0 0 13951 0 0 14290 0 0 10549 0 0 5036.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15181000 15181000 0 0 NaN 133 75 1045 1045 5408 5760 6147 6834 6147 6834 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7863 6147 6834 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7863 6147 6834 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7863 O15037 10 O15037 O15037 Protein KHNYN KHNYN sp|O15037|KHNYN_HUMAN Protein KHNYN OS=Homo sapiens GN=KHNYN PE=1 SV=3 0.999999 59.4432 4.00724E-11 203.71 170.41 203.71 1 S ______MPTWGARPASPDRFAVSAEAENKVR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX PAS(1)PDRFAVSAEAENK PAS(59.44)PDRFAVS(-59.44)AEAENK 3 3 0.43705 9894.4 0 0 13061 0 0 10550 0 0 14288 0 0 10144 0 0 10427 0 0 12711 0 0 13408 0 0 14462 0 0 52751 0 0 9365.1 0 0 12346 0 0 10585 0 0 14533 0 0 10356 0 0 10761 0 0 12864 0 0 14923 0 0 14195 0 0 49982 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28690000 28690000 0 0 NaN 134 76 10 10 2973 3152 3375 3742 3375 3742 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14249 3375 3742 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14249 3375 3742 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14249 O15042 67 O15042 O15042 U2 snRNP-associated SURP motif-containing protein U2SURP sp|O15042|SR140_HUMAN U2 snRNP-associated SURP motif-containing protein OS=Homo sapiens GN=U2SURP PE=1 SV=2 0.999994 52.3825 0.00012923 110.44 88.009 110.44 1 S KHNYRNESARESLCDSPHQNLSRPLLENKLK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPXXXXXXXX ESLCDS(1)PHQNLSR ES(-52.38)LCDS(52.38)PHQNLS(-62.02)R 6 3 -0.19392 12678 0 0 8990.5 0 0 12302 0 0 9534.5 0 0 10386 0 0 12590 0 0 9439.6 0 0 11003 0 0 8476.8 0 0 4125.1 0 0 11995 0 0 8496.1 0 0 12384 0 0 9805.6 0 0 10639 0 0 12471 0 0 9627.8 0 0 11223 0 0 8404.9 0 0 4139 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11008000 11008000 0 0 NaN 135 77 67 67 1156 1216 1308 1439 1308 1439 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8628 1308 1439 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8628 1308 1439 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8628 O15042 485 O15042 O15042 U2 snRNP-associated SURP motif-containing protein U2SURP sp|O15042|SR140_HUMAN U2 snRNP-associated SURP motif-containing protein OS=Homo sapiens GN=U2SURP PE=1 SV=2 0.990009 19.9605 0.000142353 103.77 87.876 103.77 1 S HVYYRWKLYSILQGDSPTKWRTEDFRMFKNG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPXXXXXXXXXXXX LYSILQGDS(0.99)PT(0.01)K LY(-90.36)S(-81.16)ILQGDS(19.96)PT(-19.96)K 9 3 0.61345 3256.6 0 0 6292 0 0 2842 0 0 5849.5 0 0 2499.3 0 0 3155.9 0 0 2678.6 0 0 4098.3 0 0 6912 0 0 7083.9 0 0 3080 0 0 5941.3 0 0 2881.7 0 0 5989.8 0 0 2563 0 0 3308.7 0 0 2833.9 0 0 4287.8 0 0 6640.6 0 0 6765.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10151000 10151000 0 0 NaN 136 77 485 485 2658 2806 3009 3348 3009 3348 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21289 3009 3348 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21289 3009 3348 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21289 O15042 946 O15042 O15042 U2 snRNP-associated SURP motif-containing protein U2SURP sp|O15042|SR140_HUMAN U2 snRNP-associated SURP motif-containing protein OS=Homo sapiens GN=U2SURP PE=1 SV=2 1 56.4044 0.0148333 67.022 25.482 56.404 2 S TSPSPSRSSSGRRVKSPSPKSERSERSERSH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX VKS(1)PS(1)PK VKS(56.4)PS(56.4)PK 3 3 -0.30453 0 52619 0 0 63820 0 0 51194 0 0 63076 0 0 62211 0 0 51132 0 0 60087 0 0 58397 0 0 65677 0 0 12975 0 0 49786 0 0 60284 0 0 51762 0 0 64618 0 0 62456 0 0 51901 0 0 61418 0 0 58686 0 0 64566 0 0 13569 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 91180000 0 91180000 0 NaN 137 77 946 946 3544;5151 3762;5488 4008;5846;5847 4448;4449;6498;6499 5847 6499 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9661 4008 4449 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7782 4008 4449 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7782 O15042 948 O15042 O15042 U2 snRNP-associated SURP motif-containing protein U2SURP sp|O15042|SR140_HUMAN U2 snRNP-associated SURP motif-containing protein OS=Homo sapiens GN=U2SURP PE=1 SV=2 1 56.4044 0.0148333 67.022 25.482 56.404 2 S PSPSRSSSGRRVKSPSPKSERSERSERSHKE X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPXXXXXXXXXXXXX VKS(1)PS(1)PK VKS(56.4)PS(56.4)PK 5 3 -0.30453 0 52619 0 0 63820 0 0 51194 0 0 63076 0 0 62211 0 0 51132 0 0 60087 0 0 58397 0 0 65677 0 0 12975 0 0 49786 0 0 60284 0 0 51762 0 0 64618 0 0 62456 0 0 51901 0 0 61418 0 0 58686 0 0 64566 0 0 13569 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 91180000 0 91180000 0 NaN 138 77 948 948 3544;5151 3762;5488 4008;5846;5847 4448;4449;6498;6499 5847 6499 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9661 4008 4449 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7782 4008 4449 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7782 O15042 49 O15042 O15042 U2 snRNP-associated SURP motif-containing protein U2SURP sp|O15042|SR140_HUMAN U2 snRNP-associated SURP motif-containing protein OS=Homo sapiens GN=U2SURP PE=1 SV=2 0.940705 12.0043 0.0530009 48.698 27.726 48.698 1 S SGPSDSDMPSRTRPKSPRKHNYRNESARESL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX T(0.059)RPKS(0.941)PR T(-12)RPKS(12)PR 5 3 -0.19071 20347 0 0 22606 0 0 18991 0 0 22509 0 0 19202 0 0 17252 0 0 18879 0 0 18875 0 0 24397 0 0 3929.3 0 0 19249 0 0 21355 0 0 19202 0 0 23033 0 0 19474 0 0 17554 0 0 19384 0 0 18989 0 0 23839 0 0 4136.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 287170000 287170000 0 0 NaN 139 77 49 49 4896 5221 5562 6183 5562 6183 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5070 5562 6183 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5070 5562 6183 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5070 O15085 1295 O15085 O15085 Rho guanine nucleotide exchange factor 11 ARHGEF11 sp|O15085|ARHGB_HUMAN Rho guanine nucleotide exchange factor 11 OS=Homo sapiens GN=ARHGEF11 PE=1 SV=1 0.63531 2.41062 3.40895E-07 161.47 128.11 161.47 1 S MGLCSLEHLPPRTRNSGIWESPELDRNLAED X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX T(0.365)RNS(0.635)GIWESPELDR T(-2.41)RNS(2.41)GIWES(-91.37)PELDR 4 3 -0.046143 9434.1 0 0 7378.6 0 0 9372.4 0 0 5994.4 0 0 6863 0 0 9613.9 0 0 7222.5 0 0 8288.6 0 0 6738.1 0 0 4052 0 0 8926.8 0 0 6962.4 0 0 9411 0 0 6297.5 0 0 7117.4 0 0 9465.9 0 0 7321.4 0 0 8487.5 0 0 6669 0 0 4007.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23938000 23938000 0 0 NaN 140 78 1295 1295 4894 5219 5560 6181 5560 6181 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14921 5560 6181 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14921 5560 6181 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14921 O15126 43 O15126 O15126 Secretory carrier-associated membrane protein 1 SCAMP1 sp|O15126|SCAM1_HUMAN Secretory carrier-associated membrane protein 1 OS=Homo sapiens GN=SCAMP1 PE=1 SV=2 0.42609 0 9.77785E-05 103.95 89.938 103.95 S RNVPPGLDEYNPFSDSRTPPPGGVKMPNVPN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPPPPPPPXXXXXX NVPPGLDEY(0.001)NPFS(0.147)DS(0.426)RT(0.426)PPPGGVK NVPPGLDEY(-28.84)NPFS(-4.61)DS(0)RT(0)PPPGGVK 15 4 0.60991 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 141 79 43 43 2958 3137 3359 3724 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20098 3359 3724 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20098 3359 3724 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20098 O15127 319 O15127 O15127 Secretory carrier-associated membrane protein 2 SCAMP2 sp|O15127|SCAM2_HUMAN Secretory carrier-associated membrane protein 2 OS=Homo sapiens GN=SCAMP2 PE=1 SV=2 0.97151 15.3276 1.00808E-22 267.08 252.4 267.08 1 S FSQGIFSSRTFHRAASSAAQGAFQGN_____ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX AAS(0.972)S(0.028)AAQGAFQGN AAS(15.33)S(-15.33)AAQGAFQGN 3 2 0.36133 23494 0 0 19964 0 0 20595 0 0 20362 0 0 25477 0 0 21221 0 0 23115 0 0 25141 0 0 20880 0 0 8175.3 0 0 22221 0 0 18861 0 0 20960 0 0 20897 0 0 25530 0 0 21297 0 0 23581 0 0 25312 0 0 20697 0 0 8279.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 795940000 795940000 0 0 NaN 142 80 319 319 76 81 89 102 89 102 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10502 89 102 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10502 89 102 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10502 O15131 3 O15131 O15131 Importin subunit alpha-6 KPNA5 sp|O15131|IMA6_HUMAN Importin subunit alpha-6 OS=Homo sapiens GN=KPNA5 PE=1 SV=2 1 71.4663 0.000275052 75.213 60.546 75.213 1 S _____________MASPGKDNYRMKSYKNKA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPXXXXXXXX AS(1)PGKDNYR AS(71.47)PGKDNY(-71.47)R 2 2 0.063551 19662 0 0 31735 0 0 22162 0 0 27229 0 0 24256 0 0 21932 0 0 23865 0 0 26112 0 0 30518 0 0 4070 0 0 18614 0 0 29954 0 0 22197 0 0 28148 0 0 24492 0 0 22280 0 0 24493 0 0 26153 0 0 29830 0 0 4436.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 50525000 50525000 0 0 NaN 143 81 3 3 480 511 550 614 550 614 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7314 550 614 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7314 550 614 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7314 O15164 811 O15164 O15164 Transcription intermediary factor 1-alpha TRIM24 sp|O15164|TIF1A_HUMAN Transcription intermediary factor 1-alpha OS=Homo sapiens GN=TRIM24 PE=1 SV=3 0.999889 39.6625 7.20588E-11 188.96 168.54 188.96 1 S NSSNGKSEWLDPSQKSPLHVGETRKEDDPNE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPXXXXXXX SEWLDPSQKS(1)PLHVGETR S(-105.27)EWLDPS(-39.66)QKS(39.66)PLHVGET(-54.88)R 10 4 -0.11738 7361.3 0 0 8447.5 0 0 7688.4 0 0 9258.6 0 0 8370.8 0 0 6889.8 0 0 9670.7 0 0 10429 0 0 11240 0 0 5112.1 0 0 6966.9 0 0 7984.7 0 0 7733.8 0 0 9418.9 0 0 8474.3 0 0 7065.7 0 0 9824.5 0 0 10478 0 0 11024 0 0 5055 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 48554000 48554000 0 0 NaN 144 82 811 811 3729 3970 4234 4707 4234 4707 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16678 4234 4707 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16678 4234 4707 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16678 O15213 41 O15213 O15213 WD repeat-containing protein 46 WDR46 sp|O15213|WDR46_HUMAN WD repeat-containing protein 46 OS=Homo sapiens GN=WDR46 PE=1 SV=3 0.99999 49.9347 2.8559E-11 194.19 163.23 194.19 1 S RRYWEEETVPTTAGASPGPPRNKKNRELRPQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX RYWEEETVPTTAGAS(1)PGPPR RY(-147.14)WEEET(-88.95)VPT(-69.91)T(-49.93)AGAS(49.93)PGPPR 15 3 -0.21242 8165.6 0 0 7649.7 0 0 8463.1 0 0 7243.9 0 0 7572.2 0 0 8158.8 0 0 7264.4 0 0 8683.9 0 0 8143.5 0 0 17532 0 0 7727.8 0 0 7224.1 0 0 8493.3 0 0 7477.3 0 0 7733.3 0 0 8176.7 0 0 7433.4 0 0 9218.5 0 0 7997.9 0 0 16710 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20307000 20307000 0 0 NaN 145 83 41 41 3570 3793 4046 4501 4046 4501 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14506 4046 4501 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14506 4046 4501 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14506 O15231 453 O15231 O15231 Zinc finger protein 185 ZNF185 sp|O15231|ZN185_HUMAN Zinc finger protein 185 OS=Homo sapiens GN=ZNF185 PE=1 SV=3 0.843715 7.45682 0.0125103 78.985 48.417 78.985 1 S PAQQPADPSTPERQSSPSGSEQLVRRESCGS X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX QS(0.152)S(0.844)PS(0.004)GS(0.001)EQLVR QS(-7.46)S(7.46)PS(-23.81)GS(-28.33)EQLVR 3 2 -2.2354 22240 0 0 7691.3 0 0 23345 0 0 8416.4 0 0 8328.5 0 0 22796 0 0 8564.8 0 0 12123 0 0 8108.7 0 0 5920.5 0 0 21049 0 0 7269.8 0 0 23261 0 0 8828.4 0 0 9341.4 0 0 22085 0 0 8694.4 0 0 12752 0 0 8020.2 0 0 5855.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17453000 17453000 0 0 NaN 146 84 453 453 3148 3339 3570 3959 3570 3959 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9025 3570 3959 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9025 3570 3959 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9025 O15231 465 O15231 O15231 Zinc finger protein 185 ZNF185 sp|O15231|ZN185_HUMAN Zinc finger protein 185 OS=Homo sapiens GN=ZNF185 PE=1 SV=3 0.995232 24.8034 1.19697E-15 214.14 172.11 214.14 1 S RQSSPSGSEQLVRRESCGSSVLTDFEGKDVA X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RES(0.995)CGS(0.003)S(0.001)VLTDFEGK RES(24.8)CGS(-24.8)S(-28.29)VLT(-89.29)DFEGK 3 3 0.01443 62627 0 0 13789 0 0 61756 0 0 14797 0 0 20279 0 0 61030 0 0 19492 0 0 32605 0 0 16001 0 0 22203 0 0 59258 0 0 13032 0 0 61726 0 0 15875 0 0 23014 0 0 58795 0 0 19784 0 0 34476 0 0 15936 0 0 21661 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 76357000 76357000 0 0 NaN 147 84 465 465 3224;3225 3419;3420 3654;3655 4052;4053 3654 4052 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17325 3654 4052 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17325 3654 4052 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17325 O15234 148 O15234 O15234 Protein CASC3 CASC3 sp|O15234|CASC3_HUMAN Protein CASC3 OS=Homo sapiens GN=CASC3 PE=1 SV=2 0.999985 48.2397 4.28132E-17 233.42 200.43 233.42 1 S EEKPDTKSTVTGERQSGDGQESTEPVENKVG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPPPPXX STVTGERQS(1)GDGQESTEPVENK S(-71.93)T(-70.1)VT(-48.24)GERQS(48.24)GDGQES(-65.75)T(-100.13)EPVENK 9 3 0.15194 6768.1 0 0 7846.5 0 0 7404 0 0 7394.4 0 0 8689.3 0 0 7717.7 0 0 8744.3 0 0 8564.6 0 0 7612 0 0 4869.6 0 0 6406.7 0 0 7409.7 0 0 7434.7 0 0 7625.2 0 0 8741.7 0 0 7741.2 0 0 8867.3 0 0 8704.8 0 0 7558.8 0 0 4783.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13163000 13163000 0 0 NaN 148 85 148 148 4543 4845 5162 5732 5162 5732 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8939 5162 5732 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8939 5162 5732 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8939 O15234 265 O15234 O15234 Protein CASC3 CASC3 sp|O15234|CASC3_HUMAN Protein CASC3 OS=Homo sapiens GN=CASC3 PE=1 SV=2 0.991391 20.613 0.00836749 78.401 52.271 78.401 1 S PDDIKPRRIRKPRYGSPPQRDPNWNGERLNK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX Y(0.009)GS(0.991)PPQRDPNWNGER Y(-20.61)GS(20.61)PPQRDPNWNGER 3 3 0.41564 22338 0 0 26500 0 0 25341 0 0 27225 0 0 27788 0 0 22530 0 0 29006 0 0 29928 0 0 29262 0 0 5630.2 0 0 21148 0 0 25038 0 0 25377 0 0 27834 0 0 28073 0 0 22896 0 0 29474 0 0 29903 0 0 28862 0 0 5994.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 40553000 40553000 0 0 NaN 149 85 265 265 5384 5736 6119 6804 6119 6804 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10121 6119 6804 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10121 6119 6804 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10121 O15294 725 O15294 O15294 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OGT sp|O15294|OGT1_HUMAN UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Homo sapiens GN=OGT PE=1 SV=3 0.999964 44.3844 0.0374308 48.288 31.603 48.288 1 S NMFPHLKKKAVIDFKSNGHIYDNRIVLNGID X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPXXXXXXX AVIDFKS(1)NGHIYDNR AVIDFKS(44.38)NGHIY(-44.38)DNR 7 3 -4.4619 6599 0 0 12690 0 0 5054.7 0 0 11622 0 0 3659.2 0 0 6048 0 0 3695.6 0 0 7762.1 0 0 12676 0 0 14702 0 0 6238.5 0 0 11982 0 0 5161.5 0 0 11909 0 0 3804.8 0 0 6360.2 0 0 4006 0 0 8162.5 0 0 12126 0 0 14023 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 107820000 107820000 0 0 NaN 150 87 725 725 555 592 633 707 633 707 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18856 633 707 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18856 633 707 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18856 O15320 536 O15320 O15320 cTAGE family member 5 CTAGE5 sp|O15320|CTGE5_HUMAN cTAGE family member 5 OS=Homo sapiens GN=CTAGE5 PE=1 SV=4 0.992093 20.9856 0.00013062 123.24 97.808 123.24 1 S PSPLGWPSSETRAFLSPPTLLEGPLRLSPLL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX AFLS(0.992)PPT(0.008)LLEGPLR AFLS(20.99)PPT(-20.99)LLEGPLR 4 2 -0.46863 24983 0 0 14305 0 0 23785 0 0 14797 0 0 14251 0 0 24688 0 0 16614 0 0 22323 0 0 16339 0 0 253000 0 0 23636 0 0 13516 0 0 23907 0 0 15322 0 0 15058 0 0 24752 0 0 16791 0 0 30107 0 0 16134 0 0 238750 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 34842000 34842000 0 0 NaN 151 88 536 536 179 187 201 226 201 226 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23974 201 226 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23974 201 226 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23974 O15320 635 O15320 O15320 cTAGE family member 5 CTAGE5 sp|O15320|CTGE5_HUMAN cTAGE family member 5 OS=Homo sapiens GN=CTAGE5 PE=1 SV=4 0.999805 38.3061 1.76553E-05 134.86 113.85 134.86 1 S PPQRQDRFCSNSGRLSGPAELRSFNMPSLDK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXXPPPPPPPPPPPPPPPXXXXXXXXX FCSNSGRLS(1)GPAELR FCS(-43.22)NS(-38.31)GRLS(38.31)GPAELR 9 3 -1.37 20781 0 0 10530 0 0 20093 0 0 11459 0 0 15637 0 0 21869 0 0 14282 0 0 14823 0 0 12421 0 0 4214.5 0 0 19661 0 0 9952.6 0 0 20215 0 0 11876 0 0 16110 0 0 21376 0 0 14552 0 0 15269 0 0 12335 0 0 4311.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 44658000 44658000 0 0 NaN 152 88 635 635 1243 1308 1409 1561 1409 1561 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14109 1409 1561 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14109 1409 1561 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14109 O15320;Q96RT6 647;616 O15320 O15320 cTAGE family member 5;cTAGE family member 2 CTAGE5;CTAGE1 sp|O15320|CTGE5_HUMAN cTAGE family member 5 OS=Homo sapiens GN=CTAGE5 PE=1 SV=4;sp|Q96RT6|CTGE2_HUMAN cTAGE family member 2 OS=Homo sapiens GN=CTAGE1 PE=1 SV=2 0.995142 23.1146 0.0238138 54.343 37.402 54.343 1 S GRLSGPAELRSFNMPSLDKMDGSMPSEMESS X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX S(0.005)FNMPS(0.995)LDK S(-23.11)FNMPS(23.11)LDK 6 3 0.28042 4081.5 0 0 3134.5 0 0 3283.2 0 0 3273.3 0 0 2612.9 0 0 3549.8 0 0 2538.4 0 0 3468.1 0 0 3218.6 0 0 3140 0 0 3859.1 0 0 2961.9 0 0 3343.6 0 0 3356.9 0 0 2690.7 0 0 3550.7 0 0 2606 0 0 3576.5 0 0 3147 0 0 3036.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6404600 6404600 0 0 NaN 153 88 647 647 3750 3990 4254 4729 4254 4729 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19307 4254 4729 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19307 4254 4729 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19307 O15355 201 O15355 O15355 Protein phosphatase 1G PPM1G sp|O15355|PPM1G_HUMAN Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE=1 SV=1 0.986183 18.5356 3.91663E-07 139.66 119 139.66 1 S LNGEAGPEDSTRETPSQENGPTAKAYTGFSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX ET(0.014)PS(0.986)QENGPTAK ET(-18.54)PS(18.54)QENGPT(-109.94)AK 4 3 0.20461 12500 0 0 15112 0 0 15846 0 0 15867 0 0 38202 0 0 13578 0 0 38570 0 0 23932 0 0 15666 0 0 3649 0 0 11841 0 0 14280 0 0 16038 0 0 16209 0 0 37431 0 0 13849 0 0 38616 0 0 23714 0 0 16429 0 0 3989.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 49272000 49272000 0 0 NaN 154 89 201 201 1191 1252 1351 1496 1351 1496 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8122 1351 1496 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8122 1351 1496 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8122 O15372 183 O15372 O15372 Eukaryotic translation initiation factor 3 subunit H EIF3H sp|O15372|EIF3H_HUMAN Eukaryotic translation initiation factor 3 subunit H OS=Homo sapiens GN=EIF3H PE=1 SV=1 1 125.818 0.000167857 125.82 73.977 125.82 1 S RLTPKLMEVCKEKDFSPEALKKANITFEYMF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX DFS(1)PEALKK DFS(125.82)PEALKK 3 3 0.76989 8702.5 0 0 13776 0 0 8441.7 0 0 13668 0 0 8287.5 0 0 10566 0 0 8628.1 0 0 11401 0 0 16287 0 0 7935.9 0 0 8233.8 0 0 13013 0 0 8514.1 0 0 13991 0 0 8431.3 0 0 10755 0 0 8976 0 0 11643 0 0 15745 0 0 7736.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14059000 14059000 0 0 NaN 155 90 183 183 669 713 760 840 760 840 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16563 760 840 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16563 760 840 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16563 O15400 125 O15400 O15400 Syntaxin-7 STX7 sp|O15400|STX7_HUMAN Syntaxin-7 OS=Homo sapiens GN=STX7 PE=1 SV=4 0.500833 0 0.00525939 88.976 66.821 88.976 2 S QAAEREKEFVARVRASSRVSGSFPEDSSKER X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPXX AS(0.501)S(0.501)RVS(0.847)GS(0.151)FPEDSSK AS(0)S(0)RVS(7.5)GS(-7.5)FPEDS(-48.69)S(-53.8)K 2 3 -1.282 0 15716 0 0 17268 0 0 15588 0 0 17803 0 0 21921 0 0 15873 0 0 18203 0 0 18035 0 0 19716 0 0 10510 0 0 14871 0 0 16316 0 0 15774 0 0 18216 0 0 21821 0 0 16043 0 0 18749 0 0 18323 0 0 19389 0 0 10314 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 18116000 0 18116000 0 NaN 156 91 125 125 507 538;539 579 646 579 646 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11778 579 646 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11778 579 646 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11778 O15400 126 O15400 O15400 Syntaxin-7 STX7 sp|O15400|STX7_HUMAN Syntaxin-7 OS=Homo sapiens GN=STX7 PE=1 SV=4 0.500833 0 0.00525939 88.976 66.821 88.976 2 S AAEREKEFVARVRASSRVSGSFPEDSSKERN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AS(0.501)S(0.501)RVS(0.847)GS(0.151)FPEDSSK AS(0)S(0)RVS(7.5)GS(-7.5)FPEDS(-48.69)S(-53.8)K 3 3 -1.282 0 15716 0 0 17268 0 0 15588 0 0 17803 0 0 21921 0 0 15873 0 0 18203 0 0 18035 0 0 19716 0 0 10510 0 0 14871 0 0 16316 0 0 15774 0 0 18216 0 0 21821 0 0 16043 0 0 18749 0 0 18323 0 0 19389 0 0 10314 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 18116000 0 18116000 0 NaN 157 91 126 126 507 538;539 579 646 579 646 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11778 579 646 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11778 579 646 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11778 O15400 129 O15400 O15400 Syntaxin-7 STX7 sp|O15400|STX7_HUMAN Syntaxin-7 OS=Homo sapiens GN=STX7 PE=1 SV=4 0.847263 7.49824 5.39401E-05 126.61 90.953 88.976 1;2 S REKEFVARVRASSRVSGSFPEDSSKERNLVS X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPXXXXXX AS(0.501)S(0.501)RVS(0.847)GS(0.151)FPEDSSK AS(0)S(0)RVS(7.5)GS(-7.5)FPEDS(-48.69)S(-53.8)K 6 3 -1.282 19266 15716 0 23560 17268 0 22232 15588 0 22902 17803 0 26634 21921 0 22503 15873 0 31836 18203 0 26499 18035 0 27752 19716 0 7292.8 10510 0 18242 14871 0 22253 16316 0 22279 15774 0 23549 18216 0 26838 21821 0 22637 16043 0 32045 18749 0 26645 18323 0 27556 19389 0 7480.3 10314 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 51664000 33548000 18116000 0 NaN 158 91 129 129 507 538;539 578;579 645;646 579 646 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11778 578 645 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10754 578 645 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10754 O15417 1857 O15417 O15417 Trinucleotide repeat-containing gene 18 protein TNRC18 sp|O15417|TNC18_HUMAN Trinucleotide repeat-containing gene 18 protein OS=Homo sapiens GN=TNRC18 PE=1 SV=3 1 111.851 5.7561E-16 228.46 197.92 228.46 1 S ASGGGYRLGARERALSPGLEESGLGLLARFA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX ALS(1)PGLEESGLGLLAR ALS(111.85)PGLEES(-111.85)GLGLLAR 3 3 -0.28798 5882.3 0 0 5034.7 0 0 5029.5 0 0 5612.9 0 0 6252 0 0 5697.6 0 0 4445.6 0 0 4704.2 0 0 5436.5 0 0 14980 0 0 5563 0 0 4759.4 0 0 5125 0 0 5729.2 0 0 6247.8 0 0 5723 0 0 4639.2 0 0 5208.5 0 0 5322.2 0 0 14214 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24607000 24607000 0 0 NaN 159 92 1857 1857 315 336 359 399 359 399 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23381 359 399 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23381 359 399 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23381 O15446 27 O15446 O15446 DNA-directed RNA polymerase I subunit RPA34 CD3EAP sp|O15446|RPA34_HUMAN DNA-directed RNA polymerase I subunit RPA34 OS=Homo sapiens GN=CD3EAP PE=1 SV=1 0.954005 13.1686 5.96772E-06 135.58 113.73 135.58 1 S FSCPPNFTAKPPASESPRFSLEALTGPDTEL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX FSCPPNFTAKPPAS(0.046)ES(0.954)PR FS(-108.52)CPPNFT(-57.25)AKPPAS(-13.17)ES(13.17)PR 16 3 -0.69792 18870 0 0 20428 0 0 19764 0 0 21514 0 0 13181 0 0 18171 0 0 13333 0 0 18185 0 0 23803 0 0 13437 0 0 17859 0 0 19303 0 0 19770 0 0 21970 0 0 13776 0 0 18388 0 0 13851 0 0 18645 0 0 23043 0 0 13073 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24839000 24839000 0 0 NaN 160 94 27 27 1317 1390 1496 1658 1496 1658 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16147 1496 1658 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16147 1496 1658 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16147 O15446 285 O15446 O15446 DNA-directed RNA polymerase I subunit RPA34 CD3EAP sp|O15446|RPA34_HUMAN DNA-directed RNA polymerase I subunit RPA34 OS=Homo sapiens GN=CD3EAP PE=1 SV=1 0.96965 15.0475 1.79471E-07 149.74 127.62 149.74 1 S KQEQINTEPLEDTVLSPTKKRKRQKGTEGME X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX QEQINTEPLEDTVLS(0.97)PT(0.03)K QEQINT(-117.19)EPLEDT(-46.81)VLS(15.05)PT(-15.05)K 15 3 1.1545 6206.4 0 0 6225.3 0 0 5750.1 0 0 6970.6 0 0 7038 0 0 5708.1 0 0 6387.5 0 0 6303.1 0 0 7589.5 0 0 16001 0 0 5871.1 0 0 5885.1 0 0 5830.8 0 0 7091.5 0 0 7058.1 0 0 5815.5 0 0 6566.1 0 0 6781.6 0 0 7437.6 0 0 15213 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20005000 20005000 0 0 NaN 161 94 285 285 3021 3202 3425 3798 3425 3798 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18774 3425 3798 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18774 3425 3798 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18774 Q6A1A2;O15530 214;241 Q6A1A2 Q6A1A2 Putative 3-phosphoinositide-dependent protein kinase 2;3-phosphoinositide-dependent protein kinase 1 PDPK2P;PDPK1 sp|Q6A1A2|PDPK2_HUMAN Putative 3-phosphoinositide-dependent protein kinase 2 OS=Homo sapiens GN=PDPK2P PE=5 SV=1;sp|O15530|PDPK1_HUMAN 3-phosphoinositide-dependent protein kinase 1 OS=Homo sapiens GN=PDPK1 PE=1 SV=1 0.989068 19.5651 3.66038E-16 228.18 209.81 228.18 1 S TAKVLSPESKQARANSFVGTAQYVSPELLTE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP ANS(0.989)FVGT(0.011)AQYVSPELLTEK ANS(19.57)FVGT(-19.57)AQY(-100.27)VS(-133.72)PELLT(-187.94)EK 3 3 -0.009744 9309.6 0 0 10157 0 0 9524 0 0 10227 0 0 6601.6 0 0 9815.5 0 0 5506.9 0 0 10094 0 0 10991 0 0 16450 0 0 8810.1 0 0 9595.1 0 0 9539.9 0 0 10490 0 0 6861.6 0 0 9891.4 0 0 5808.3 0 0 10610 0 0 10612 0 0 15723 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 199470000 199470000 0 0 NaN 162 96 214 214 344 370 400 441 400 441 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22639 400 441 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22639 400 441 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22639 O15541 6 O15541 O15541 RING finger protein 113A RNF113A sp|O15541|R113A_HUMAN RING finger protein 113A OS=Homo sapiens GN=RNF113A PE=1 SV=1 1 109.29 1.89205E-05 109.29 109.29 109.29 1 S __________MAEQLSPGKAVDQVCTFLFKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX AEQLS(1)PGK AEQLS(109.29)PGK 5 2 -0.24271 17073 0 0 28535 0 0 17767 0 0 27861 0 0 17681 0 0 18515 0 0 16791 0 0 21231 0 0 27506 0 0 4965.3 0 0 16158 0 0 26952 0 0 17848 0 0 28498 0 0 17945 0 0 19019 0 0 17428 0 0 21340 0 0 26686 0 0 5166.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 62128000 62128000 0 0 NaN 163 97 6 6 156 162 175 199 175 199 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10577 175 199 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10577 175 199 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10577 O15541 253 O15541 O15541 RING finger protein 113A RNF113A sp|O15541|R113A_HUMAN RING finger protein 113A OS=Homo sapiens GN=RNF113A PE=1 SV=1 0.999965 44.6285 5.73541E-05 107.83 92.768 87.792 1 S EGRYGVYEDENYEVGSDDEEIPFKCFICRQS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPXXXXXXX YGVYEDENYEVGS(1)DDEEIPFK Y(-74.86)GVY(-74.66)EDENY(-44.63)EVGS(44.63)DDEEIPFK 13 3 0.85558 17346 0 0 24373 0 0 18373 0 0 26203 0 0 18958 0 0 19309 0 0 20004 0 0 31637 0 0 26649 0 0 355440 0 0 16417 0 0 23034 0 0 18451 0 0 26682 0 0 19225 0 0 20486 0 0 20494 0 0 41967 0 0 26013 0 0 335420 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 71894000 71894000 0 0 NaN 164 97 253 253 5386 5738 6121;6122;6123;6124;6125 6806;6807;6808;6809;6810;6811;6812 6124 6811 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22156 6121 6806 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21740 6121 6806 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21740 O43159 223 O43159 O43159 Ribosomal RNA-processing protein 8 RRP8 sp|O43159|RRP8_HUMAN Ribosomal RNA-processing protein 8 OS=Homo sapiens GN=RRP8 PE=1 SV=2 0.999806 37.128 0.00301939 98.73 68.012 98.73 1 S PDQAPAEAPTEKTEVSPVPRTDSHEARAGAL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX TEVS(1)PVPR T(-37.13)EVS(37.13)PVPR 4 2 0.47635 27246 0 0 41977 0 0 27114 0 0 40873 0 0 22591 0 0 25288 0 0 19128 0 0 29645 0 0 46466 0 0 3743.9 0 0 25781 0 0 39648 0 0 27248 0 0 41784 0 0 23169 0 0 26105 0 0 20386 0 0 29680 0 0 44689 0 0 4211.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 50243000 50243000 0 0 NaN 165 98 223 223 4700 5011 5338 5933 5338 5933 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9323 5338 5933 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9323 5338 5933 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9323 O43182 820 O43182 O43182 Rho GTPase-activating protein 6 ARHGAP6 sp|O43182|RHG06_HUMAN Rho GTPase-activating protein 6 OS=Homo sapiens GN=ARHGAP6 PE=1 SV=3 0.592132 1.61898 6.44482E-05 122.93 91.292 122.93 1 S PATEGRAHPAVSRACSTPHVQVAGKAERPTA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX ACS(0.592)T(0.408)PHVQVAGK ACS(1.62)T(-1.62)PHVQVAGK 3 3 -0.60465 7137.5 0 0 23590 0 0 12156 0 0 24452 0 0 13850 0 0 10348 0 0 12392 0 0 14310 0 0 25721 0 0 3752 0 0 6772.8 0 0 22289 0 0 11970 0 0 24828 0 0 13947 0 0 11058 0 0 13049 0 0 14314 0 0 24813 0 0 3864.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 36499000 36499000 0 0 NaN 166 100 820 820 95 101 110 123 110 123 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10500 110 123 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10500 110 123 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10500 O43182 772 O43182 O43182 Rho GTPase-activating protein 6 ARHGAP6 sp|O43182|RHG06_HUMAN Rho GTPase-activating protein 6 OS=Homo sapiens GN=ARHGAP6 PE=1 SV=3 0.874071 8.45712 3.73462E-07 143.04 119.75 143.04 1 S DIFESSSLRAGPCSLSQGNLSPNWPRWQGSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPXXXXX AGPCS(0.001)LS(0.874)QGNLS(0.125)PNWPR AGPCS(-28.49)LS(8.46)QGNLS(-8.46)PNWPR 7 3 0.007667 5744 0 0 10131 0 0 6035.3 0 0 11198 0 0 7120.1 0 0 6073.8 0 0 6831.6 0 0 7468.6 0 0 10320 0 0 9797.5 0 0 5436.4 0 0 9576.6 0 0 6073.2 0 0 11351 0 0 7160.7 0 0 6352.8 0 0 7063.4 0 0 7732.7 0 0 10035 0 0 9398.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24292000 24292000 0 0 NaN 167 100 772 772 218 232 250 278 250 278 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17247 250 278 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17247 250 278 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17247 O43237 194 O43237 O43237 Cytoplasmic dynein 1 light intermediate chain 2 DYNC1LI2 sp|O43237|DC1L2_HUMAN Cytoplasmic dynein 1 light intermediate chain 2 OS=Homo sapiens GN=DYNC1LI2 PE=1 SV=1 0.999987 48.963 0.00771912 80.477 71.998 80.477 1 S KDFQDYMEPEEGCQGSPQRRGPLTSGSDEEN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX DFQDYMEPEEGCQGS(1)PQR DFQDY(-48.96)MEPEEGCQGS(48.96)PQR 15 3 0.17653 5824.7 0 0 7159 0 0 5826.7 0 0 7478 0 0 5810.6 0 0 5503.7 0 0 6577.5 0 0 7280.9 0 0 7884.9 0 0 15684 0 0 5511.7 0 0 6764.7 0 0 5868.3 0 0 7627 0 0 5909.7 0 0 5656.6 0 0 6694.3 0 0 7706.9 0 0 7724.6 0 0 14937 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7932500 7932500 0 0 NaN 168 101 194 194 666 710 757 837 757 837 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16706 757 837 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16706 757 837 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16706 O43242 6 O43242 O43242 26S proteasome non-ATPase regulatory subunit 3 PSMD3 sp|O43242|PSMD3_HUMAN 26S proteasome non-ATPase regulatory subunit 3 OS=Homo sapiens GN=PSMD3 PE=1 SV=2 1 82.1708 0.00717652 82.171 48.942 82.171 1 S __________MKQEGSARRRGADKAKPPPGG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPXXXXXXXXXXXXX MKQEGS(1)AR MKQEGS(82.17)AR 6 3 -0.056826 29438 0 0 39550 0 0 29860 0 0 39137 0 0 28607 0 0 29160 0 0 30071 0 0 31791 0 0 39241 0 0 2795.5 0 0 27858 0 0 37359 0 0 30030 0 0 40050 0 0 29134 0 0 29712 0 0 30790 0 0 31871 0 0 38330 0 0 3368.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 103730000 103730000 0 0 NaN 169 102 6 6 2711 2876 3085 3432 3085 3432 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6542 3085 3432 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6542 3085 3432 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6542 O43290 738 O43290 O43290 U4/U6.U5 tri-snRNP-associated protein 1 SART1 sp|O43290|SNUT1_HUMAN U4/U6.U5 tri-snRNP-associated protein 1 OS=Homo sapiens GN=SART1 PE=1 SV=1 1 54.2593 0.0250957 54.259 27.473 54.259 1 S KEAFRQLSHRFHGKGSGKMKTERRMKKLDEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPXXXXXXXXXXXXX FHGKGS(1)GK FHGKGS(54.26)GK 6 3 0.44197 26473 0 0 27893 0 0 28870 0 0 27889 0 0 27470 0 0 27135 0 0 28409 0 0 28604 0 0 27143 0 0 6061.8 0 0 25059 0 0 26349 0 0 28918 0 0 28624 0 0 27971 0 0 27262 0 0 28838 0 0 28818 0 0 26836 0 0 6369.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28485000 28485000 0 0 NaN 170 103 738 738 1271 1338 1440 1597 1440 1597 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8325 1440 1597 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8325 1440 1597 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8325 O43290 448 O43290 O43290 U4/U6.U5 tri-snRNP-associated protein 1 SART1 sp|O43290|SNUT1_HUMAN U4/U6.U5 tri-snRNP-associated protein 1 OS=Homo sapiens GN=SART1 PE=1 SV=1 0.999961 46.3917 0.03586 50.581 34.458 50.581 1 S GDFGSRLRGRGRRRVSEVEEEKEPVPQPLPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RVS(1)EVEEEKEPVPQPLPSDDTR RVS(46.39)EVEEEKEPVPQPLPS(-46.39)DDT(-47.89)R 3 4 -0.42312 12632 0 0 15924 0 0 13078 0 0 14658 0 0 11880 0 0 13953 0 0 15434 0 0 13886 0 0 15925 0 0 13886 0 0 11954 0 0 15036 0 0 13135 0 0 15116 0 0 12177 0 0 14042 0 0 15553 0 0 14350 0 0 15692 0 0 13397 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7661300 7661300 0 0 NaN 171 103 448 448 3552 3770 4016 4457 4016 4457 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14100 4016 4457 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14100 4016 4457 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14100 O43303 641 O43303 O43303 Centriolar coiled-coil protein of 110 kDa CCP110 sp|O43303|CP110_HUMAN Centriolar coiled-coil protein of 110 kDa OS=Homo sapiens GN=CCP110 PE=1 SV=3 1 95.5016 0.00578766 95.502 25.903 95.502 1 S GFVNKNKMLGTSSKESEELLKSKMLAFEEMR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPXXXXXXXXXX ES(1)EELLK ES(95.5)EELLK 2 2 0.99078 33451 0 0 21555 0 0 37561 0 0 21925 0 0 23824 0 0 36681 0 0 24314 0 0 29120 0 0 20294 0 0 8183.5 0 0 31668 0 0 20364 0 0 37418 0 0 22726 0 0 24991 0 0 36029 0 0 24616 0 0 29749 0 0 20194 0 0 8379.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27324000 27324000 0 0 NaN 172 104 641 641 1147 1207 1299 1430 1299 1430 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13946 1299 1430 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13946 1299 1430 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13946 O43303 372 O43303 O43303 Centriolar coiled-coil protein of 110 kDa CCP110 sp|O43303|CP110_HUMAN Centriolar coiled-coil protein of 110 kDa OS=Homo sapiens GN=CCP110 PE=1 SV=3 0.952242 13.0008 0.00812496 86.467 55.917 86.467 1 S LTGSYAKLPSPEPSMSPKMHRRRSRTSSACH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX LPSPEPS(0.048)MS(0.952)PK LPS(-43.66)PEPS(-13)MS(13)PK 9 2 3.5272 16115 0 0 9325.4 0 0 15748 0 0 8758 0 0 9010.3 0 0 15967 0 0 9027.6 0 0 13094 0 0 9225.5 0 0 15377 0 0 15247 0 0 8806.2 0 0 15796 0 0 9142.9 0 0 9542 0 0 15675 0 0 9193.9 0 0 13709 0 0 9094.4 0 0 14783 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6125900 6125900 0 0 NaN 173 104 372 372 2510 2651 2847 3176 2847 3176 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15978 2847 3176 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15978 2847 3176 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15978 O43314 1172 O43314 O43314 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 PPIP5K2 sp|O43314|VIP2_HUMAN Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 OS=Homo sapiens GN=PPIP5K2 PE=1 SV=3 0.752017 4.82901 8.802E-05 113.54 79.701 113.54 1 S VPRKTAEISSTALRSSPIMRKKVSLNTYTPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPXXXXXXXXXXX TAEISST(0.001)ALRS(0.247)S(0.752)PIMR T(-61.98)AEIS(-47.39)S(-39.61)T(-31.53)ALRS(-4.83)S(4.83)PIMR 12 3 1.1564 8502.3 0 0 11228 0 0 10371 0 0 12116 0 0 14502 0 0 9204.2 0 0 15415 0 0 12038 0 0 11748 0 0 6947 0 0 8052.3 0 0 10611 0 0 10388 0 0 12339 0 0 14482 0 0 9404.4 0 0 15547 0 0 12174 0 0 11747 0 0 6820.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20832000 20832000 0 0 NaN 174 105 1172 1172 4607 4913 5233 5811 5233 5811 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14664 5233 5811 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14664 5233 5811 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14664 O43314 492 O43314 O43314 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 PPIP5K2 sp|O43314|VIP2_HUMAN Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 OS=Homo sapiens GN=PPIP5K2 PE=1 SV=3 0.456283 0 2.40963E-05 128.52 97.568 128.52 S RKVQLTYLPHGCPKTSSEEEDSRREEPSLLL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T(0.456)S(0.456)S(0.087)EEEDSRREEPSLLLVLK T(0)S(0)S(-7.18)EEEDS(-54.12)RREEPS(-63.46)LLLVLK 2 4 -0.048655 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 175 105 492 492 4954 5282 5625 6252 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21006 5625 6252 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21006 5625 6252 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21006 O43318 389 O43318 O43318 Mitogen-activated protein kinase kinase kinase 7 MAP3K7 sp|O43318|M3K7_HUMAN Mitogen-activated protein kinase kinase kinase 7 OS=Homo sapiens GN=MAP3K7 PE=1 SV=1 0.997409 25.8542 0.017404 68.83 52.887 68.83 1 S SSVESLPPTSEGKRMSADMSEIEARIAATTA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPXXXXXX MS(0.997)ADMS(0.003)EIEAR MS(25.85)ADMS(-25.85)EIEAR 2 2 -2.2037 15471 0 0 12884 0 0 14426 0 0 16029 0 0 24412 0 0 15086 0 0 24965 0 0 19206 0 0 16032 0 0 22246 0 0 14635 0 0 12189 0 0 14710 0 0 16251 0 0 24183 0 0 15258 0 0 25142 0 0 19775 0 0 16198 0 0 21391 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9583100 9583100 0 0 NaN 176 106 389 389 2739 2905 3115 3462 3115 3462 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15996 3115 3462 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15996 3115 3462 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15996 O43318 439 O43318 O43318 Mitogen-activated protein kinase kinase kinase 7 MAP3K7 sp|O43318|M3K7_HUMAN Mitogen-activated protein kinase kinase kinase 7 OS=Homo sapiens GN=MAP3K7 PE=1 SV=1 0.999998 57.0036 1.41738E-22 264.96 232.22 264.96 1 S VPEIVISGNGQPRRRSIQDLTVTGTEPGQVS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(1)IQDLTVTGTEPGQVSSR S(57)IQDLT(-57)VT(-100.46)GT(-121.5)EPGQVS(-192.67)S(-190.35)R 1 2 0.43784 29649 0 0 36858 0 0 28755 0 0 38930 0 0 81946 0 0 31121 0 0 91631 0 0 53493 0 0 38802 0 0 64899 0 0 28053 0 0 34830 0 0 29676 0 0 39720 0 0 80105 0 0 31946 0 0 91360 0 0 54746 0 0 40527 0 0 62349 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 75272000 75272000 0 0 NaN 177 106 439 439 3443;3855 3657;4108 3899;4384 4328;4875 4384 4875 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16019 4384 4875 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16019 4384 4875 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16019 O43353 529 O43353 O43353 Receptor-interacting serine/threonine-protein kinase 2 RIPK2 sp|O43353|RIPK2_HUMAN Receptor-interacting serine/threonine-protein kinase 2 OS=Homo sapiens GN=RIPK2 PE=1 SV=2 0.5 0 0.000207574 109.96 74.544 109.96 1 S QMGLQPYPEILVVSRSPSLNLLQNKSM____ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPXXXXXX S(0.5)PS(0.5)LNLLQNK S(0)PS(0)LNLLQNK 1 3 0.23286 7622.8 0 0 6799 0 0 6879.3 0 0 6542.6 0 0 4419.5 0 0 7946.2 0 0 4599.4 0 0 5353.8 0 0 6985.2 0 0 2277.2 0 0 7210.3 0 0 6421.3 0 0 6940 0 0 6756 0 0 4635 0 0 7874 0 0 4738.5 0 0 5539.4 0 0 6791.1 0 0 2268.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26764000 26764000 0 0 NaN 178 107 529 529 4178 4453 4746 5265 4746 5265 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18375 4746 5265 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18375 4746 5265 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18375 O43353 531 O43353 O43353 Receptor-interacting serine/threonine-protein kinase 2 RIPK2 sp|O43353|RIPK2_HUMAN Receptor-interacting serine/threonine-protein kinase 2 OS=Homo sapiens GN=RIPK2 PE=1 SV=2 0.5 0 0.000207574 109.96 74.544 109.96 1 S GLQPYPEILVVSRSPSLNLLQNKSM______ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.5)PS(0.5)LNLLQNK S(0)PS(0)LNLLQNK 3 3 0.23286 7622.8 0 0 6799 0 0 6879.3 0 0 6542.6 0 0 4419.5 0 0 7946.2 0 0 4599.4 0 0 5353.8 0 0 6985.2 0 0 2277.2 0 0 7210.3 0 0 6421.3 0 0 6940 0 0 6756 0 0 4635 0 0 7874 0 0 4738.5 0 0 5539.4 0 0 6791.1 0 0 2268.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26764000 26764000 0 0 NaN 179 107 531 531 4178 4453 4746 5265 4746 5265 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18375 4746 5265 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18375 4746 5265 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18375 O43379 1144 O43379 O43379 WD repeat-containing protein 62 WDR62 sp|O43379|WDR62_HUMAN WD repeat-containing protein 62 OS=Homo sapiens GN=WDR62 PE=1 SV=4 0.975533 16.6281 3.02807E-05 122.34 89.957 122.34 1 S MDRGGSQPRAGTGYASPDRTHVLAAGKAEET X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPXXXX AGT(0.003)GYAS(0.976)PDRT(0.021)HVLAAGK AGT(-24.84)GY(-41.76)AS(16.63)PDRT(-16.63)HVLAAGK 7 3 1.7013 13800 0 0 25570 0 0 16079 0 0 23722 0 0 17942 0 0 16829 0 0 18821 0 0 19826 0 0 25458 0 0 10492 0 0 13067 0 0 24145 0 0 16085 0 0 24359 0 0 18117 0 0 17233 0 0 19298 0 0 20087 0 0 24837 0 0 10339 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24081000 24081000 0 0 NaN 180 108 1144 1144 234 248 266 297 266 297 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11339 266 297 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11339 266 297 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11339 O43379 32 O43379 O43379 WD repeat-containing protein 62 WDR62 sp|O43379|WDR62_HUMAN WD repeat-containing protein 62 OS=Homo sapiens GN=WDR62 PE=1 SV=4 0.738745 4.5143 0.00918546 79.863 50.589 79.863 1 S KLPSVMAGVPARRGQSSPPPAPPICLRRRTR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPXXXX RGQS(0.739)S(0.261)PPPAPPICLR RGQS(4.51)S(-4.51)PPPAPPICLR 4 3 0.33934 11241 0 0 10893 0 0 11208 0 0 9511.4 0 0 8717.6 0 0 13278 0 0 9892.1 0 0 9296.7 0 0 11312 0 0 8784.2 0 0 10637 0 0 10282 0 0 11260 0 0 9910.9 0 0 9011.6 0 0 13108 0 0 10052 0 0 9744.3 0 0 11102 0 0 8486.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27573000 27573000 0 0 NaN 181 108 32 32 1581;3248 1666;3445 3681 4084 3681 4084 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13027 3681 4084 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13027 3681 4084 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13027 O43379 33 O43379 O43379 WD repeat-containing protein 62 WDR62 sp|O43379|WDR62_HUMAN WD repeat-containing protein 62 OS=Homo sapiens GN=WDR62 PE=1 SV=4 0.566565 1.16327 0.00300959 93.427 70.624 93.427 1 S LPSVMAGVPARRGQSSPPPAPPICLRRRTRL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX GQS(0.433)S(0.567)PPPAPPICLR GQS(-1.16)S(1.16)PPPAPPICLR 4 3 -0.65165 5596.2 0 0 5686 0 0 5309.2 0 0 6679 0 0 5996 0 0 4951.5 0 0 6278.5 0 0 5668 0 0 8068.3 0 0 3608.8 0 0 5294.3 0 0 5377 0 0 5371.5 0 0 6769.4 0 0 6049.9 0 0 5056.1 0 0 6426.4 0 0 5766.4 0 0 7885.1 0 0 3529.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14765000 14765000 0 0 NaN 182 108 33 33 1581;3248 1666;3445 1801 2002 1801 2002 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15229 1801 2002 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15229 1801 2002 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15229 O43379 1325 O43379 O43379 WD repeat-containing protein 62 WDR62 sp|O43379|WDR62_HUMAN WD repeat-containing protein 62 OS=Homo sapiens GN=WDR62 PE=1 SV=4 0.583335 2.56449 0.00320615 76.356 62.794 76.356 1 S TQPGVTVPAVSFPAPSPVEESALRLHGSAFR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPXXXXXXX LTLSSACDGLLQPPVDT(0.323)QPGVT(0.032)VPAVS(0.011)FPAPS(0.583)PVEES(0.05)ALR LT(-56)LS(-52.67)S(-48.9)ACDGLLQPPVDT(-2.56)QPGVT(-12.57)VPAVS(-17.35)FPAPS(2.56)PVEES(-10.63)ALR 32 4 -0.22205 4548.1 0 0 3963.4 0 0 3486.9 0 0 5097.4 0 0 3772 0 0 2444.1 0 0 3178.2 0 0 3862.5 0 0 4270.5 0 0 58208 0 0 4299.7 0 0 3750.5 0 0 3574.5 0 0 5122 0 0 3803.7 0 0 2695.7 0 0 3293.6 0 0 5573.3 0 0 4167.3 0 0 54899 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23468000 23468000 0 0 NaN 183 108 1325 1325 2624 2771 2972 3309 2972 3309 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23756 2972 3309 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23756 2972 3309 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23756 O43379 1228 O43379 O43379 WD repeat-containing protein 62 WDR62 sp|O43379|WDR62_HUMAN WD repeat-containing protein 62 OS=Homo sapiens GN=WDR62 PE=1 SV=4 0.871185 8.30296 3.53654E-81 444.75 398.43 444.75 1 S MEATASSRARISRSISLGDSEGPIVATLAQP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.129)IS(0.871)LGDSEGPIVATLAQPLR S(-8.3)IS(8.3)LGDS(-42.81)EGPIVAT(-143.88)LAQPLR 3 2 -0.17763 5420.1 0 0 11358 0 0 7308 0 0 11901 0 0 7988.8 0 0 7692.5 0 0 9091.1 0 0 12657 0 0 12446 0 0 179510 0 0 5135.9 0 0 10732 0 0 7260.6 0 0 12119 0 0 8085.7 0 0 8298.7 0 0 9292.9 0 0 17912 0 0 12138 0 0 169320 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 59362000 59362000 0 0 NaN 184 108 1228 1228 3865 4118 4394 4888 4394 4888 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23640 4394 4888 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23640 4394 4888 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23640 O43395 619 O43395 O43395 U4/U6 small nuclear ribonucleoprotein Prp3 PRPF3 sp|O43395|PRPF3_HUMAN U4/U6 small nuclear ribonucleoprotein Prp3 OS=Homo sapiens GN=PRPF3 PE=1 SV=2 1 184.325 1.84283E-10 184.32 153.21 184.32 1 S WDEQTSNTKGDDDEESDEEAVKKTNKCVLVW X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPXXXXXXXX GDDDEES(1)DEEAVKK GDDDEES(184.32)DEEAVKK 7 3 0.23262 32288 0 0 29295 0 0 29680 0 0 30053 0 0 23340 0 0 29861 0 0 23306 0 0 27057 0 0 31602 0 0 8236.1 0 0 30543 0 0 27678 0 0 29958 0 0 30808 0 0 24067 0 0 29920 0 0 23952 0 0 27497 0 0 30830 0 0 8381.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29277000 29277000 0 0 NaN 185 109 619 619 1383 1459 1568 1732 1568 1732 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10013 1568 1732 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10013 1568 1732 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10013 O43399 12 O43399 O43399 Tumor protein D54 TPD52L2 sp|O43399|TPD54_HUMAN Tumor protein D54 OS=Homo sapiens GN=TPD52L2 PE=1 SV=2 1 86.6931 2.35286E-07 117.65 91.18 117.65 1 S ____MDSAGQDINLNSPNKGLLSDSMTDVPV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX MDSAGQDINLNS(1)PNK MDS(-86.69)AGQDINLNS(86.69)PNK 12 3 -0.4935 6421.7 0 0 8414 0 0 6774.2 0 0 6444.7 0 0 5765.8 0 0 6549.5 0 0 5435 0 0 7149.7 0 0 7785.9 0 0 6402.1 0 0 6077.9 0 0 7937.2 0 0 6788 0 0 6739.1 0 0 5908.2 0 0 6579.8 0 0 5612.6 0 0 7341.3 0 0 7582.6 0 0 6193.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30750000 30750000 0 0 NaN 186 110 12 12 2676 2828 3033 3378 3033 3378 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15878 3033 3378 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15878 3033 3378 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15878 O43399 166 O43399 O43399 Tumor protein D54 TPD52L2 sp|O43399|TPD54_HUMAN Tumor protein D54 OS=Homo sapiens GN=TPD52L2 PE=1 SV=2 0.978717 16.649 0.00113009 98.281 69.954 98.281 1 S ISRKLGDMRNSATFKSFEDRVGTIKSKVVGD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX NSAT(0.021)FKS(0.979)FEDR NS(-39.45)AT(-16.65)FKS(16.65)FEDR 7 3 -0.04705 89358 0 0 96541 0 0 93843 0 0 101520 0 0 96220 0 0 97193 0 0 100400 0 0 106010 0 0 114920 0 0 9661.9 0 0 84572 0 0 91228 0 0 94273 0 0 103860 0 0 97576 0 0 97743 0 0 102390 0 0 106290 0 0 112770 0 0 11551 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 1982000000 1982000000 0 0 NaN 187 110 166 166 2911 3085 3305 3664;3665 3305 3664 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13516 3305 3664 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13516 3305 3664 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13516 O43399 96 O43399 O43399 Tumor protein D54 TPD52L2 sp|O43399|TPD54_HUMAN Tumor protein D54 OS=Homo sapiens GN=TPD52L2 PE=1 SV=2 0.999992 51.2258 5.8367E-05 126.01 97.033 126.01 1 S LGLSTLGELKQNLSRSWHDVQVSSAYVKTSE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX S(1)WHDVQVSSAYVK S(51.23)WHDVQVS(-51.23)S(-79.68)AY(-105.35)VK 1 3 -1.7684 10914 0 0 14950 0 0 12764 0 0 17148 0 0 11178 0 0 13380 0 0 17263 0 0 19936 0 0 17853 0 0 8457.2 0 0 10334 0 0 14135 0 0 12738 0 0 17413 0 0 11523 0 0 13678 0 0 17296 0 0 19998 0 0 17591 0 0 8424.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25788000 25788000 0 0 NaN 188 110 96 96 4588 4893 5213 5788 5213 5788 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16557 5213 5788 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16557 5213 5788 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16557 O43426 1392 O43426 O43426 Synaptojanin-1 SYNJ1 sp|O43426|SYNJ1_HUMAN Synaptojanin-1 OS=Homo sapiens GN=SYNJ1 PE=1 SV=2 0.961273 13.9484 3.62356E-08 174.02 92.719 174.02 1 S PPIPARSQSQENMRSSPNPFITGLTRTNPFS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPXXXXX S(0.039)S(0.961)PNPFITGLTR S(-13.95)S(13.95)PNPFIT(-96.32)GLT(-113.12)R 2 2 0.23638 10577 0 0 9775.8 0 0 10091 0 0 9831.5 0 0 11480 0 0 9535.2 0 0 13153 0 0 11504 0 0 10222 0 0 18973 0 0 10007 0 0 9235.1 0 0 10209 0 0 10086 0 0 11589 0 0 9631.3 0 0 13228 0 0 12035 0 0 10211 0 0 18131 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13179000 13179000 0 0 NaN 189 111 1392 1392 4385 4672 4976 5522 4976 5522 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19513 4976 5522 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19513 4976 5522 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19513 O43432 1156 O43432 O43432 Eukaryotic translation initiation factor 4 gamma 3 EIF4G3 sp|O43432|IF4G3_HUMAN Eukaryotic translation initiation factor 4 gamma 3 OS=Homo sapiens GN=EIF4G3 PE=1 SV=2 0.956276 13.3987 2.38724E-05 130.83 110.57 130.83 1 S LPSATARPNTFMRGGSSKDLLDNQSQEEQRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP GGS(0.956)S(0.044)KDLLDNQSQEEQRR GGS(13.4)S(-13.4)KDLLDNQS(-65)QEEQRR 3 3 0.0019521 39658 0 0 17133 0 0 42759 0 0 17832 0 0 26329 0 0 43775 0 0 28724 0 0 30944 0 0 21178 0 0 9620.5 0 0 37538 0 0 16189 0 0 42681 0 0 18684 0 0 27716 0 0 42577 0 0 28917 0 0 31826 0 0 21216 0 0 9775 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 46346000 46346000 0 0 NaN 190 112 1156 1156 1456;1457 1533;1534 1656 1836 1656 1836 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9933 1656 1836 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9933 1656 1836 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9933 O43432 1157 O43432 O43432 Eukaryotic translation initiation factor 4 gamma 3 EIF4G3 sp|O43432|IF4G3_HUMAN Eukaryotic translation initiation factor 4 gamma 3 OS=Homo sapiens GN=EIF4G3 PE=1 SV=2 0.737956 4.49657 1.48981E-11 208.73 181.23 208.73 1 S PSATARPNTFMRGGSSKDLLDNQSQEEQRRE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPXX GGS(0.262)S(0.738)KDLLDNQSQEEQR GGS(-4.5)S(4.5)KDLLDNQS(-57.71)QEEQR 4 3 0.24775 35639 0 0 18790 0 0 40068 0 0 21377 0 0 31353 0 0 38160 0 0 33981 0 0 31834 0 0 24076 0 0 7670.4 0 0 33740 0 0 17765 0 0 39989 0 0 22061 0 0 32359 0 0 37436 0 0 34192 0 0 32408 0 0 24176 0 0 7959.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37066000 37066000 0 0 NaN 191 112 1157 1157 1456;1457 1533;1534 1655 1835 1655 1835 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11195 1655 1835 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11195 1655 1835 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11195 O43432 495 O43432 O43432 Eukaryotic translation initiation factor 4 gamma 3 EIF4G3 sp|O43432|IF4G3_HUMAN Eukaryotic translation initiation factor 4 gamma 3 OS=Homo sapiens GN=EIF4G3 PE=1 SV=2 1 91.7459 3.30964E-07 163.96 113.83 163.96 1 S QTEEILDSQNLNSRRSPVPAQIAITVPKTWK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPXXX RS(1)PVPAQIAITVPK RS(91.75)PVPAQIAIT(-91.75)VPK 2 3 -0.20995 16515 0 0 11428 0 0 17957 0 0 13829 0 0 13263 0 0 16459 0 0 13980 0 0 14801 0 0 11688 0 0 6910.2 0 0 15633 0 0 10810 0 0 17943 0 0 14095 0 0 13745 0 0 16372 0 0 14134 0 0 15119 0 0 11630 0 0 6849.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 168940000 168940000 0 0 NaN 192 112 495 495 3487 3704 3950 4388 3950 4388 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17291 3950 4388 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17291 3950 4388 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17291 O43432 232 O43432 O43432 Eukaryotic translation initiation factor 4 gamma 3 EIF4G3 sp|O43432|IF4G3_HUMAN Eukaryotic translation initiation factor 4 gamma 3 OS=Homo sapiens GN=EIF4G3 PE=1 SV=2 0.728004 4.27571 0.00315685 100.02 46.049 100.02 1 S KQEEKPKPDPVLKSPSPVLRLVLSGEKKEQE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX S(0.272)PS(0.728)PVLR S(-4.28)PS(4.28)PVLR 3 2 0.10498 16443 0 0 11420 0 0 16840 0 0 12668 0 0 16945 0 0 17743 0 0 17857 0 0 15820 0 0 10995 0 0 1899.5 0 0 15561 0 0 10795 0 0 16937 0 0 13012 0 0 17196 0 0 17537 0 0 17945 0 0 16000 0 0 11140 0 0 2154.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 41051000 41051000 0 0 NaN 193 112 232 232 4192 4467 4761 5286 4761 5286 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10046 4761 5286 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10046 4761 5286 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10046 O43463 391 O43463 O43463 Histone-lysine N-methyltransferase SUV39H1 SUV39H1 sp|O43463|SUV91_HUMAN Histone-lysine N-methyltransferase SUV39H1 OS=Homo sapiens GN=SUV39H1 PE=1 SV=1 1 92.8038 0.000154643 105.6 85.874 105.6 1 S STRMDSNFGLAGLPGSPKKRVRIECKCGTES X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPXXXXXXXXXXXXX MDSNFGLAGLPGS(1)PK MDS(-92.8)NFGLAGLPGS(92.8)PK 13 3 0.089669 14565 0 0 14448 0 0 14535 0 0 15500 0 0 10650 0 0 13683 0 0 10652 0 0 12748 0 0 15678 0 0 14642 0 0 13782 0 0 13654 0 0 14590 0 0 15821 0 0 11042 0 0 13812 0 0 10981 0 0 13264 0 0 15256 0 0 14082 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 59827000 59827000 0 0 NaN 194 113 391 391 2678 2830;2831 3035;3036 3380;3381 3035 3380 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18942 3035 3380 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18942 3035 3380 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18942 O43491 715 O43491 O43491 Band 4.1-like protein 2 EPB41L2 sp|O43491|E41L2_HUMAN Band 4.1-like protein 2 OS=Homo sapiens GN=EPB41L2 PE=1 SV=1 0.68865 3.44749 0.00921489 84.999 56.487 84.999 1 S KDERVITEEMNGKEISPGSGPGEIRKVEPVT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX EIS(0.689)PGS(0.311)GPGEIR EIS(3.45)PGS(-3.45)GPGEIR 3 2 0.41934 17580 0 0 12477 0 0 18293 0 0 12525 0 0 15840 0 0 17961 0 0 13442 0 0 15913 0 0 14914 0 0 11102 0 0 16638 0 0 11787 0 0 18344 0 0 12945 0 0 16187 0 0 17756 0 0 13838 0 0 16375 0 0 14653 0 0 10822 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 53390000 53390000 0 0 NaN 195 114 715 715 999 1054 1140 1257 1140 1257 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12199 1140 1257 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12199 1140 1257 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12199 O43491 598 O43491 O43491 Band 4.1-like protein 2 EPB41L2 sp|O43491|E41L2_HUMAN Band 4.1-like protein 2 OS=Homo sapiens GN=EPB41L2 PE=1 SV=1 0.996092 24.0629 7.86531E-07 142.43 111.04 142.43 1 S SIAVVQDGDGRREVRSPTKAPHLQLIEGKKN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPXX S(0.996)PT(0.004)KAPHLQLIEGK S(24.06)PT(-24.06)KAPHLQLIEGK 1 3 0.28683 77840 0 0 23122 0 0 81370 0 0 24797 0 0 27295 0 0 74470 0 0 24959 0 0 43137 0 0 25544 0 0 14283 0 0 73670 0 0 21853 0 0 81065 0 0 26157 0 0 30859 0 0 72062 0 0 25534 0 0 44914 0 0 25179 0 0 14447 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 60979000 60979000 0 0 NaN 196 114 598 598 1218;4203 1281;4480 1380;4774 1531;5299 4774 5299 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15837 4774 5299 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15837 4774 5299 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15837 O43491 58 O43491 O43491 Band 4.1-like protein 2 EPB41L2 sp|O43491|E41L2_HUMAN Band 4.1-like protein 2 OS=Homo sapiens GN=EPB41L2 PE=1 SV=1 0.99014 20.0201 8.92734E-16 220.91 160.36 220.91 1 S EEKGSQPPPAAESQSSLRRQKREKETSESRG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPXXXXXXXXXXXX GSQPPPAAESQS(0.01)S(0.99)LRR GS(-214.98)QPPPAAES(-54.01)QS(-20.02)S(20.02)LRR 13 3 0.79697 8667.2 0 0 6266.2 0 0 7727.5 0 0 5482.1 0 0 7128.4 0 0 8030 0 0 7402.4 0 0 6151.9 0 0 6146 0 0 2081.1 0 0 8197.9 0 0 5915 0 0 7828.3 0 0 5717.6 0 0 7272 0 0 7915.6 0 0 7487.5 0 0 6306.3 0 0 6117.5 0 0 2101.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16073000 16073000 0 0 NaN 197 114 58 58 1629 1716 1855 2068 1855 2068 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6474 1855 2068 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6474 1855 2068 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6474 O43491 87 O43491 O43491 Band 4.1-like protein 2 EPB41L2 sp|O43491|E41L2_HUMAN Band 4.1-like protein 2 OS=Homo sapiens GN=EPB41L2 PE=1 SV=1 0.996569 24.6931 2.57411E-08 177.06 91.388 80.534 1 S RGISRFIPPWLKKQKSYTLVVAKDGGDKKEP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX KQKS(0.997)YT(0.003)LVVAK KQKS(24.69)Y(-43.11)T(-24.69)LVVAK 4 3 0.4386 88536 0 0 29463 0 0 93353 0 0 32778 0 0 77593 0 0 88091 0 0 89361 0 0 73796 0 0 34435 0 0 18385 0 0 83796 0 0 27852 0 0 93554 0 0 34342 0 0 79786 0 0 85685 0 0 88892 0 0 75131 0 0 36306 0 0 19020 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 867310000 867310000 0 0 NaN 198 114 87 87 2180;3061;4604 2303;3247;4910 2479;3474;5230 2759;3848;5808 2479 2759 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14528 5230 5808 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17460 5230 5808 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17460 O43491 550 O43491 O43491 Band 4.1-like protein 2 EPB41L2 sp|O43491|E41L2_HUMAN Band 4.1-like protein 2 OS=Homo sapiens GN=EPB41L2 PE=1 SV=1 1 75.6 0.00310883 93.517 71.319 93.517 1 S PAPHFERTSSKRVSRSLDGAPIGVMDQSLMK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(1)LDGAPIGVMDQSLMK S(75.6)LDGAPIGVMDQS(-75.6)LMK 1 3 -0.47838 5050.7 0 0 4124.7 0 0 4074.5 0 0 3434.8 0 0 6258.7 0 0 5464.7 0 0 5840.6 0 0 5087.4 0 0 4847.4 0 0 15917 0 0 4775.6 0 0 3892.6 0 0 4184.8 0 0 3601.4 0 0 6215.5 0 0 5412.2 0 0 5938.1 0 0 5597.3 0 0 4825 0 0 15105 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8205900 8205900 0 0 NaN 199 114 550 550 3922 4180 4462 4960 4462 4960 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21310 4462 4960 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21310 4462 4960 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21310 O43493 71 O43493 O43493 Trans-Golgi network integral membrane protein 2 TGOLN2 sp|O43493|TGON2_HUMAN Trans-Golgi network integral membrane protein 2 OS=Homo sapiens GN=TGOLN2 PE=1 SV=2 0.764637 6.29515 1.77721E-09 175.71 155.96 175.71 1 S SHPEPQTPKDSPSKSSAEAQTPEDTPNKSGA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPXXX DSPS(0.055)KS(0.179)S(0.765)AEAQTPEDTPNK DS(-33.3)PS(-11.4)KS(-6.3)S(6.3)AEAQT(-35.51)PEDT(-108.18)PNK 7 3 0.55768 25485 0 0 7542.5 0 0 28783 0 0 7629.4 0 0 7664.9 0 0 29855 0 0 6487.9 0 0 16219 0 0 7938.1 0 0 4759.8 0 0 24127 0 0 7125.7 0 0 28532 0 0 8185.5 0 0 9010 0 0 28771 0 0 6700.4 0 0 16940 0 0 7771 0 0 4857.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13280000 13280000 0 0 NaN 200 115 71 71 816 864 920 1015 920 1015 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9362 920 1015 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9362 920 1015 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9362 O43493 298 O43493 O43493 Trans-Golgi network integral membrane protein 2 TGOLN2 sp|O43493|TGON2_HUMAN Trans-Golgi network integral membrane protein 2 OS=Homo sapiens GN=TGOLN2 PE=1 SV=2 0.817746 6.52511 1.45492E-07 154.72 130.92 154.72 1 S LADKGKLSPHAFKTESGEETDLISPPQEEVK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP T(0.182)ES(0.818)GEETDLISPPQEEVK T(-6.53)ES(6.53)GEET(-35.35)DLIS(-108.62)PPQEEVK 3 3 -1.3861 10258 0 0 5996.3 0 0 12675 0 0 5959.4 0 0 5723.7 0 0 10485 0 0 6957.1 0 0 8531.6 0 0 5958 0 0 27606 0 0 9715.4 0 0 5664.2 0 0 12541 0 0 6193.9 0 0 6235.4 0 0 10335 0 0 6995.1 0 0 9465.3 0 0 5921.1 0 0 26192 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10111000 10111000 0 0 NaN 201 115 298 298 4692 5003 5329 5923 5329 5923 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16858 5329 5923 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16858 5329 5923 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16858 O43516 340 O43516 O43516 WAS/WASL-interacting protein family member 1 WIPF1 sp|O43516|WIPF1_HUMAN WAS/WASL-interacting protein family member 1 OS=Homo sapiens GN=WIPF1 PE=1 SV=3 0.543731 0.790583 1.42681E-07 170.79 130.88 170.79 1 S SSGNDETPRLPQRNLSLSSSTPPLPSPGRSG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX NLS(0.544)LS(0.453)S(0.003)STPPLPSPGR NLS(0.79)LS(-0.79)S(-23.3)S(-33.47)T(-33.47)PPLPS(-89.08)PGR 3 2 1.0368 11708 0 0 7437.7 0 0 13701 0 0 7859.2 0 0 12925 0 0 13805 0 0 12545 0 0 13027 0 0 9042.9 0 0 30981 0 0 11086 0 0 7028.6 0 0 13672 0 0 8139.4 0 0 13153 0 0 13621 0 0 12692 0 0 14030 0 0 9071.1 0 0 29474 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18708000 18708000 0 0 NaN 202 116 340 340 2864 3035 3250 3606 3250 3606 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17724 3250 3606 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17724 3250 3606 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17724 O43561 224 O43561 O43561 Linker for activation of T-cells family member 1 LAT sp|O43561|LAT_HUMAN Linker for activation of T-cells family member 1 OS=Homo sapiens GN=LAT PE=1 SV=1 1 117.118 8.04641E-08 172.3 146.48 172.3 1 S SAEASLDGSREYVNVSQELHPGAAKTEPAAL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPXXXXXX EYVNVS(1)QELHPGAAK EY(-117.12)VNVS(117.12)QELHPGAAK 6 3 0.12614 4551.5 0 0 4724.2 0 0 4997 0 0 5348.7 0 0 29169 0 0 5137 0 0 31728 0 0 13853 0 0 5174 0 0 8679.4 0 0 4308.6 0 0 4466.3 0 0 5306.8 0 0 5450.4 0 0 28184 0 0 5284.2 0 0 31446 0 0 13820 0 0 6231.4 0 0 8493.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 270940000 270940000 0 0 NaN 203 117 224 224 1234 1299 1399 1551 1399 1551 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15298 1399 1551 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15298 1399 1551 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15298 O43561 84 O43561 O43561 Linker for activation of T-cells family member 1 LAT sp|O43561|LAT_HUMAN Linker for activation of T-cells family member 1 OS=Homo sapiens GN=LAT PE=1 SV=1 0.999934 41.8126 0.0285763 51.135 30.898 51.135 1 S SYPPLSQPDLLPIPRSPQPLGGSHRTPSSRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPXXXXXX S(1)PQPLGGSHR S(41.81)PQPLGGS(-41.81)HR 1 3 -0.26491 16124 0 0 13504 0 0 16172 0 0 13892 0 0 18958 0 0 15047 0 0 19452 0 0 17290 0 0 14174 0 0 2706.2 0 0 15258 0 0 12759 0 0 16317 0 0 14258 0 0 19076 0 0 15064 0 0 19632 0 0 17338 0 0 14209 0 0 2948.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12842000 12842000 0 0 NaN 204 117 84 84 4156 4430 4721 5240 4721 5240 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6378 4721 5240 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6378 4721 5240 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6378 O43561 241 O43561 O43561 Linker for activation of T-cells family member 1 LAT sp|O43561|LAT_HUMAN Linker for activation of T-cells family member 1 OS=Homo sapiens GN=LAT PE=1 SV=1 0.845452 7.39346 1.66783E-07 145.95 138.99 145.95 1 S ELHPGAAKTEPAALSSQEAEEVEEEGAPDYE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPPP TEPAALS(0.154)S(0.845)QEAEEVEEEGAPDYENLQELN T(-32.56)EPAALS(-7.39)S(7.39)QEAEEVEEEGAPDY(-130.01)ENLQELN 8 3 -0.64128 3829.9 0 0 3104.2 0 0 2760.7 0 0 4191.9 0 0 6601 0 0 4276.3 0 0 7156.6 0 0 5096.8 0 0 4370.1 0 0 36992 0 0 3620.1 0 0 2938.6 0 0 2889.4 0 0 4239.1 0 0 6477.2 0 0 4362.5 0 0 7181.8 0 0 6195.4 0 0 4430.2 0 0 34951 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 29640000 29640000 0 0 NaN 205 117 241 241 4687 4998 5323;5324 5915;5916 5323 5915 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20910 5323 5915 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20910 5323 5915 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20910 O43566 288 O43566 O43566 Regulator of G-protein signaling 14 RGS14 sp|O43566|RGS14_HUMAN Regulator of G-protein signaling 14 OS=Homo sapiens GN=RGS14 PE=1 SV=4 0.999805 38.2328 1.17537E-10 190.55 162.91 190.55 1 S GFLAFVSSKSESHRKSLGSTEGESESRPGKY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPX S(1)LGSTEGESESRPGK S(38.23)LGS(-38.23)T(-43.46)EGES(-110.19)ES(-140.37)RPGK 1 3 -0.44582 31436 0 0 13175 0 0 32126 0 0 13559 0 0 36340 0 0 30779 0 0 38683 0 0 27799 0 0 13848 0 0 4648.9 0 0 29749 0 0 12448 0 0 32366 0 0 14175 0 0 36639 0 0 30054 0 0 38584 0 0 28140 0 0 14718 0 0 5020.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 67300000 67300000 0 0 NaN 206 118 288 288 3941 4200 4482 4982 4482 4982 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8925 4482 4982 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8925 4482 4982 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8925 O43583 73 O43583 O43583 Density-regulated protein DENR sp|O43583|DENR_HUMAN Density-regulated protein OS=Homo sapiens GN=DENR PE=1 SV=2 0.988848 19.4778 0.0151471 76.682 35.018 76.682 1 S EKNFPNEFAKLTVENSPKQEAGISEGQGTAG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPXXXXXXXXXXXXX LT(0.011)VENS(0.989)PK LT(-19.48)VENS(19.48)PK 6 2 0.61885 28519 0 0 48848 0 0 31743 0 0 47713 0 0 28968 0 0 28025 0 0 30412 0 0 37847 0 0 47155 0 0 9128.1 0 0 26998 0 0 46139 0 0 31746 0 0 48744 0 0 29597 0 0 29110 0 0 31346 0 0 37858 0 0 45818 0 0 9471.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29331000 29331000 0 0 NaN 207 119 73 73 2641 2788 2989 3326 2989 3326 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12517 2989 3326 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12517 2989 3326 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12517 O43598 123 O43598 O43598 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 DNPH1 sp|O43598|DNPH1_HUMAN 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 OS=Homo sapiens GN=DNPH1 PE=1 SV=1 1 50.8967 0.0293938 50.897 37.889 50.897 1 S AVAFNKRILCLFRPQSGRVLSAMIRGAADGS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX ILCLFRPQS(1)GR ILCLFRPQS(50.9)GR 9 3 0.10268 1966.8 0 0 4222.4 0 0 1623 0 0 4317.4 0 0 2535.6 0 0 1831.5 0 0 2733.8 0 0 3648.6 0 0 4515.2 0 0 4591.6 0 0 1859.8 0 0 3989.3 0 0 1665.6 0 0 4387.2 0 0 2523.7 0 0 1978.2 0 0 2822 0 0 3727.8 0 0 4379.6 0 0 4408 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8021700 8021700 0 0 NaN 208 120 123 123 1873 1977 2135 2393 2135 2393 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21722 2135 2393 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21722 2135 2393 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21722 O43598 169 O43598 O43598 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 DNPH1 sp|O43598|DNPH1_HUMAN 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 OS=Homo sapiens GN=DNPH1 PE=1 SV=1 0.935338 12.8423 6.41374E-05 104.3 87.637 104.3 1 S LDRYFEADPPGQVAASPDPTT__________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPXXXXXXXXXX YFEADPPGQVAAS(0.935)PDPT(0.049)T(0.016) Y(-101.06)FEADPPGQVAAS(12.84)PDPT(-12.84)T(-17.65) 13 3 0.020612 7842.7 0 0 10901 0 0 7308.3 0 0 10791 0 0 7371.2 0 0 6952.5 0 0 7620.2 0 0 8920.6 0 0 10607 0 0 14253 0 0 7419.2 0 0 10297 0 0 7391 0 0 11025 0 0 7482.9 0 0 7191.7 0 0 7826.5 0 0 9301.2 0 0 10339 0 0 13628 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26176000 26176000 0 0 NaN 209 120 169 169 5373 5724 6105 6786 6105 6786 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17669 6105 6786 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17669 6105 6786 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17669 O43709 240 O43709 O43709 Probable 18S rRNA (guanine-N(7))-methyltransferase WBSCR22 sp|O43709|WBS22_HUMAN Probable 18S rRNA (guanine-N(7))-methyltransferase OS=Homo sapiens GN=WBSCR22 PE=1 SV=2 1 44.9804 0.0566042 44.98 19.087 44.98 1 S PRESVFTNERFPLRMSRRGMVRKSRAWVLEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPXXXXXXXXXXXXXX FPLRMS(1)R FPLRMS(44.98)R 6 2 -0.30888 7431.5 0 0 14667 0 0 7669 0 0 13615 0 0 7998.3 0 0 7763.2 0 0 7256.7 0 0 9446.3 0 0 16115 0 0 4644.5 0 0 7033 0 0 13849 0 0 7711.3 0 0 13949 0 0 8095.1 0 0 8072.5 0 0 7664.9 0 0 9550 0 0 15525 0 0 4592 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13339000 13339000 0 0 NaN 210 123 240 240 1300 1371 1475 1635 1475 1635 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15958 1475 1635 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15958 1475 1635 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15958 O43719 579 O43719 O43719 HIV Tat-specific factor 1 HTATSF1 sp|O43719|HTSF1_HUMAN HIV Tat-specific factor 1 OS=Homo sapiens GN=HTATSF1 PE=1 SV=1 1 90.4338 0.00611869 90.434 68.864 90.434 1 S EFEENGLEKDLDEEGSEKELHENVLDKELEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX DLDEEGS(1)EK DLDEEGS(90.43)EK 7 2 -2.0038 70121 0 0 74066 0 0 76422 0 0 71204 0 0 67696 0 0 76063 0 0 64684 0 0 78439 0 0 78064 0 0 49201 0 0 66376 0 0 69951 0 0 76478 0 0 73363 0 0 69184 0 0 76148 0 0 66354 0 0 80071 0 0 76459 0 0 48144 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 21161000 21161000 0 0 NaN 211 124 579 579 727 771 822 908;909 822 908 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10180 822 908 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10180 822 908 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10180 O43719 498 O43719 O43719 HIV Tat-specific factor 1 HTATSF1 sp|O43719|HTSF1_HUMAN HIV Tat-specific factor 1 OS=Homo sapiens GN=HTATSF1 PE=1 SV=1 0.999996 56.5559 8.68056E-05 125.5 105.95 125.5 1 S KESEEGNPVRGSEEDSPKKESKKKTLKNDCE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX GSEEDS(1)PKKESK GS(-56.56)EEDS(56.56)PKKES(-57.46)K 6 3 -0.17234 46883 0 0 43256 0 0 47935 0 0 48458 0 0 45459 0 0 46337 0 0 43858 0 0 48373 0 0 51726 0 0 6972.1 0 0 44367 0 0 40892 0 0 48174 0 0 49403 0 0 46263 0 0 46579 0 0 44936 0 0 48653 0 0 50704 0 0 7684.6 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 84869000 84869000 0 0 NaN 212 124 498 498 1598;1599 1684;1685 1820;1821 2023;2024 1821 2024 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7338 1821 2024 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7338 1821 2024 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7338 O43719 387 O43719 O43719 HIV Tat-specific factor 1 HTATSF1 sp|O43719|HTSF1_HUMAN HIV Tat-specific factor 1 OS=Homo sapiens GN=HTATSF1 PE=1 SV=1 0.984304 19.2992 0.000363841 101.2 51.852 101.2 1 S FLNAPEANRGLRRSDSVSASERAGPSRARHF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX RS(0.012)DS(0.984)VS(0.004)ASER RS(-19.3)DS(19.3)VS(-23.78)AS(-50.26)ER 4 3 -0.18869 3392.6 0 0 2988.7 0 0 3631.6 0 0 3877.6 0 0 2618.4 0 0 4450.7 0 0 3585.1 0 0 3777.9 0 0 3862.1 0 0 2420.5 0 0 3211.1 0 0 2828.4 0 0 3632.5 0 0 3936.3 0 0 2730.9 0 0 4431.7 0 0 3610.4 0 0 3888.5 0 0 3799 0 0 2366.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 4427400 4427400 0 0 NaN 213 124 387 387 3468 3684 3930 4365 3930 4365 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5071 3930 4365 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5071 3930 4365 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5071 O43719 616 O43719 O43719 HIV Tat-specific factor 1 HTATSF1 sp|O43719|HTSF1_HUMAN HIV Tat-specific factor 1 OS=Homo sapiens GN=HTATSF1 PE=1 SV=1 1 195.798 2.64528E-09 195.8 134.15 195.8 1 S EFEDDGSEKVLDEEGSEREFDEDSDEKEEEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX VLDEEGS(1)ER VLDEEGS(195.8)ER 7 2 0.055605 38938 0 0 41023 0 0 35017 0 0 40121 0 0 32375 0 0 40931 0 0 31620 0 0 39326 0 0 43586 0 0 7208.8 0 0 36830 0 0 38748 0 0 35452 0 0 41263 0 0 33011 0 0 40985 0 0 32550 0 0 39727 0 0 42499 0 0 7698.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 104040000 104040000 0 0 NaN 214 124 616 616 5155 5493 5854 6506 5854 6506 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10375 5854 6506 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10375 5854 6506 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10375 O43741 183 O43741 O43741 5'-AMP-activated protein kinase subunit beta-2 PRKAB2 sp|O43741|AAKB2_HUMAN 5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens GN=PRKAB2 PE=1 SV=1 0.458513 0 0.00429149 89.831 84.653 89.831 S LDSMESSETSCRDLSSSPPGPYGQEMYAFRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPX DLS(0.083)S(0.459)S(0.459)PPGPYGQEMYAFR DLS(-7.42)S(0)S(0)PPGPY(-54.65)GQEMY(-79.83)AFR 4 3 1.4671 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 215 125 183 183 747 791 842 929 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19968 842 929 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19968 842 929 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19968 O43741 184 O43741 O43741 5'-AMP-activated protein kinase subunit beta-2 PRKAB2 sp|O43741|AAKB2_HUMAN 5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens GN=PRKAB2 PE=1 SV=1 0.458513 0 0.00429149 89.831 84.653 89.831 S DSMESSETSCRDLSSSPPGPYGQEMYAFRSE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DLS(0.083)S(0.459)S(0.459)PPGPYGQEMYAFR DLS(-7.42)S(0)S(0)PPGPY(-54.65)GQEMY(-79.83)AFR 5 3 1.4671 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 216 125 184 184 747 791 842 929 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19968 842 929 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19968 842 929 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19968 O43741 108 O43741 O43741 5'-AMP-activated protein kinase subunit beta-2 PRKAB2 sp|O43741|AAKB2_HUMAN 5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens GN=PRKAB2 PE=1 SV=1 1 161.738 5.62899E-08 164.79 141.8 164.79 1 S SGSFNNWSTKIPLIKSHNDFVAILDLPEGEH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(1)HNDFVAILDLPEGEHQYK S(161.74)HNDFVAILDLPEGEHQY(-161.74)K 1 4 0.12034 3575.2 0 0 5036.2 0 0 3248.7 0 0 4035.7 0 0 4135 0 0 3128.9 0 0 3968.2 0 0 3926.3 0 0 5111.3 0 0 15936 0 0 3381.8 0 0 4751.9 0 0 3300.6 0 0 4190.2 0 0 4142.6 0 0 3216.8 0 0 4078.6 0 0 4387.6 0 0 4994.9 0 0 15097 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13229000 13229000 0 0 NaN 217 125 108 108 3835 4088 4362 4851 4362 4851 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21531 4362 4851 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21531 4362 4851 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21531 O43752 129 O43752 O43752 Syntaxin-6 STX6 sp|O43752|STX6_HUMAN Syntaxin-6 OS=Homo sapiens GN=STX6 PE=1 SV=1 0.974016 15.7389 1.93446E-05 128.38 106.26 128.38 1 S LAERKNRQALLGDSGSQNWSTGTTDKYGRLD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPXXXXX QALLGDS(0.026)GS(0.974)QNWSTGTTDK QALLGDS(-15.74)GS(15.74)QNWS(-58.4)T(-64.84)GT(-74.78)T(-80.18)DK 9 3 0.24633 7819.1 0 0 8943.1 0 0 7305.2 0 0 8294.5 0 0 12104 0 0 7783.8 0 0 11499 0 0 11129 0 0 9108.3 0 0 24510 0 0 7397 0 0 8444.6 0 0 7443.1 0 0 8547.9 0 0 11989 0 0 7913 0 0 11669 0 0 11772 0 0 9088.6 0 0 23337 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10203000 10203000 0 0 NaN 218 126 129 129 2996 3175 3398 3768 3398 3768 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17070 3398 3768 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17070 3398 3768 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17070 O43752 2 O43752 O43752 Syntaxin-6 STX6 sp|O43752|STX6_HUMAN Syntaxin-6 OS=Homo sapiens GN=STX6 PE=1 SV=1 1 86.0107 2.08281E-06 86.011 78.412 86.011 1 S ______________MSMEDPFFVVKGEVQKA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPXXXXXX S(1)MEDPFFVVK S(86.01)MEDPFFVVK 1 2 -0.6334 21254 0 0 18912 0 0 20895 0 0 20036 0 0 31543 0 0 23571 0 0 35277 0 0 30522 0 0 22000 0 0 96572 0 0 20110 0 0 17872 0 0 21198 0 0 20560 0 0 31421 0 0 23738 0 0 35366 0 0 33257 0 0 22270 0 0 91640 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 48329000 48329000 0 0 NaN 219 126 2 2 4027 4292;4293 4580;4581 5088;5089 4581 5089 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24242 4581 5089 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24242 4581 5089 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24242 O43765 77 O43765 O43765 Small glutamine-rich tetratricopeptide repeat-containing protein alpha SGTA sp|O43765|SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Homo sapiens GN=SGTA PE=1 SV=1 1 132.037 4.8424E-05 132.04 101.68 132.04 1 S FEAAATGKEMPQDLRSPARTPPSEEDSAEAE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX EMPQDLRS(1)PAR EMPQDLRS(132.04)PAR 8 2 0.29628 21323 0 0 23528 0 0 19605 0 0 23715 0 0 18525 0 0 21819 0 0 18844 0 0 19717 0 0 24497 0 0 9558.5 0 0 20171 0 0 22227 0 0 19828 0 0 24308 0 0 18873 0 0 21946 0 0 19321 0 0 20147 0 0 23931 0 0 9456.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 53636000 53636000 0 0 NaN 220 127 77 77 1065;4076 1123;4346 1211 1332 1211 1332 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10207 1211 1332 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10207 1211 1332 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10207 O43765 305 O43765 O43765 Small glutamine-rich tetratricopeptide repeat-containing protein alpha SGTA sp|O43765|SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Homo sapiens GN=SGTA PE=1 SV=1 0.958773 13.7604 3.58011E-07 162.46 146.37 162.46 1 S ELIEQLRSQIRSRTPSASNDDQQE_______ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPXXXXXXX SRT(0.001)PS(0.959)AS(0.04)NDDQQE S(-43.95)RT(-30.5)PS(13.76)AS(-13.76)NDDQQE 5 2 0.24108 2550 0 0 1367.2 0 0 2479.6 0 0 1097.8 0 0 262.94 0 0 2304.2 0 0 471.77 0 0 1486.6 0 0 1253.8 0 0 571.02 0 0 2412.7 0 0 1290 0 0 2474.1 0 0 1163 0 0 401.4 0 0 2246.6 0 0 491.6 0 0 1540.1 0 0 1203.9 0 0 572.09 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 2781800 2781800 0 0 NaN 221 127 305 305 4317 4602 4903 5447 4903 5447 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5288 4903 5447 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5288 4903 5447 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5288 O43768 108 O43768 O43768 Alpha-endosulfine ENSA sp|O43768|ENSA_HUMAN Alpha-endosulfine OS=Homo sapiens GN=ENSA PE=1 SV=1 0.726336 4.2392 3.66447E-05 151.48 32.412 151.48 1 S TGDHIPTPQDLPQRKSSLVTSKLAGGQVE__ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX S(0.726)S(0.274)LVTSK S(4.24)S(-4.24)LVT(-66.96)S(-65.36)K 1 2 0.39652 86669 0 0 60148 0 0 84577 0 0 55465 0 0 130370 0 0 86826 0 0 137200 0 0 89129 0 0 58366 0 0 4695.6 0 0 82003 0 0 56793 0 0 85858 0 0 57739 0 0 129620 0 0 85668 0 0 137170 0 0 89455 0 0 60933 0 0 6484.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 296320000 296320000 0 0 NaN 222 128 108 108 2231;4370 2359;4655 4959 5504 4959 5504 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12520 4959 5504 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12520 4959 5504 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12520 O43768 109 O43768 O43768 Alpha-endosulfine ENSA sp|O43768|ENSA_HUMAN Alpha-endosulfine OS=Homo sapiens GN=ENSA PE=1 SV=1 0.672775 3.1328 0.00335049 95.428 55.274 95.428 1 S GDHIPTPQDLPQRKSSLVTSKLAGGQVE___ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX KS(0.327)S(0.673)LVTSK KS(-3.13)S(3.13)LVT(-35.49)S(-52.57)K 3 3 0.63258 22326 0 0 12854 0 0 23235 0 0 14177 0 0 26366 0 0 19770 0 0 27163 0 0 19620 0 0 12707 0 0 2061.4 0 0 21130 0 0 12150 0 0 23384 0 0 14566 0 0 26569 0 0 19569 0 0 27216 0 0 19748 0 0 13152 0 0 2395.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 686970000 686970000 0 0 NaN 223 128 109 109 2231;4370 2359;4655 2540 2837 2540 2837 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11159 2540 2837 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11159 2540 2837 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11159 O43768 2 O43768 O43768 Alpha-endosulfine ENSA sp|O43768|ENSA_HUMAN Alpha-endosulfine OS=Homo sapiens GN=ENSA PE=1 SV=1 1 81.777 1.51714E-18 160.77 133.63 160.77 1 S ______________MSQKQEEENPAEETGEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(1)QKQEEENPAEETGEEKQDTQEK S(81.78)QKQEEENPAEET(-81.78)GEEKQDT(-130.47)QEK 1 4 0.88895 78650 0 0 58987 0 0 70345 0 0 62668 0 0 195030 0 0 68483 0 0 204750 0 0 122690 0 0 63262 0 0 31980 0 0 74392 0 0 55744 0 0 72855 0 0 64214 0 0 190560 0 0 69125 0 0 204080 0 0 121930 0 0 68421 0 0 32953 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 287120000 287120000 0 0 NaN 224 128 2 2 4231;4232 4509;4510 4805;4806 5332;5333;5334 4806 5333 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10495 4806 5333 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10495 4806 5333 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10495 O43768;P56211 67;62 O43768;P56211 O43768 Alpha-endosulfine;cAMP-regulated phosphoprotein 19 ENSA;ARPP19 sp|O43768|ENSA_HUMAN Alpha-endosulfine OS=Homo sapiens GN=ENSA PE=1 SV=1;sp|P56211|ARP19_HUMAN cAMP-regulated phosphoprotein 19 OS=Homo sapiens GN=ARPP19 PE=1 SV=2 0.931284 11.3206 0.000217682 111.12 93.797 111.12 1 S DFLMKRLQKGQKYFDSGDYNMAKAKMKNKQL;DFLRKRLQKGQKYFDSGDYNMAKAKMKNKQL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX YFDS(0.931)GDY(0.069)NMAK Y(-52.14)FDS(11.32)GDY(-11.32)NMAK 4 2 -0.59443 31408 0 0 31844 0 0 37619 0 0 29461 0 0 17533 0 0 39310 0 0 18799 0 0 31354 0 0 34695 0 0 60722 0 0 29744 0 0 30068 0 0 37280 0 0 30553 0 0 19011 0 0 38977 0 0 19510 0 0 33588 0 0 33559 0 0 57902 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 13803000 13803000 0 0 NaN 225 128;729 67;62 67 5372 5723 6104 6784;6785 6104 6784 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17650 6104 6784 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17650 6104 6784 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17650 O43768 43 O43768 O43768 Alpha-endosulfine ENSA sp|O43768|ENSA_HUMAN Alpha-endosulfine OS=Homo sapiens GN=ENSA PE=1 SV=1 0.999963 44.9301 0.000129029 101.75 84.506 101.75 1 S LPERAEEAKLKAKYPSLGQKPGGSDFLMKRL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX YPS(1)LGQKPGGSDFLMK Y(-44.93)PS(44.93)LGQKPGGS(-52.85)DFLMK 3 3 0.47823 17976 0 0 19167 0 0 17610 0 0 18275 0 0 18633 0 0 19216 0 0 21699 0 0 20175 0 0 21478 0 0 17351 0 0 17009 0 0 18102 0 0 17772 0 0 18833 0 0 18892 0 0 19264 0 0 21935 0 0 20722 0 0 21201 0 0 16805 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19355000 19355000 0 0 NaN 226 128 43 43 5410 5762 6149 6836 6149 6836 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20246 6149 6836 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20246 6149 6836 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20246 O43815 373 O43815 O43815 Striatin STRN sp|O43815|STRN_HUMAN Striatin OS=Homo sapiens GN=STRN PE=1 SV=4 0.853965 7.78859 7.60268E-08 139.73 117.53 139.73 1 S LANLRDVDELPSLQPSVGSPSRPSSSRLPEH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPPPXXXX DVDELPSLQPS(0.854)VGS(0.142)PS(0.004)RPSSSR DVDELPS(-66.05)LQPS(7.79)VGS(-7.79)PS(-23.38)RPS(-51.32)S(-51.32)S(-49.76)R 11 3 0.73324 5295.7 0 0 8041 0 0 6323.8 0 0 7563 0 0 6339.1 0 0 6424.2 0 0 7010.6 0 0 8166.2 0 0 9002.1 0 0 13812 0 0 5014.9 0 0 7593.4 0 0 6310 0 0 7776.4 0 0 6443.4 0 0 6538 0 0 7158.5 0 0 8539.9 0 0 8797.9 0 0 13194 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16687000 16687000 0 0 NaN 227 130 373 373 836 884 940 1035 940 1035 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15941 940 1035 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15941 940 1035 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15941 O43847 94 O43847 O43847 Nardilysin NRD1 sp|O43847|NRDC_HUMAN Nardilysin OS=Homo sapiens GN=NRD1 PE=1 SV=2 0.99898 29.9074 1.73297E-10 186.06 132.28 186.06 1 S ARLGADESEEEGRRGSLSNAGDPEIVKSPSD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX RGS(0.999)LS(0.001)NAGDPEIVK RGS(29.91)LS(-29.91)NAGDPEIVK 3 3 -0.046912 27518 0 0 34720 0 0 25650 0 0 33038 0 0 38284 0 0 23942 0 0 40693 0 0 34730 0 0 38154 0 0 7000.7 0 0 26032 0 0 32789 0 0 26095 0 0 33879 0 0 38137 0 0 24553 0 0 41236 0 0 34630 0 0 37754 0 0 7395.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 293990000 293990000 0 0 NaN 228 131 94 94 3254 3451 3687 4090 3687 4090 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12463 3687 4090 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12463 3687 4090 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12463 O43852 44 O43852 O43852 Calumenin CALU sp|O43852|CALU_HUMAN Calumenin OS=Homo sapiens GN=CALU PE=1 SV=2 1 84.3648 0.0100859 84.365 63.74 84.365 2 S HHEPQLSDKVHNDAQSFDYDHDAFLGAEEAK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPPPP VHNDAQS(1)FDY(1)DHDAFLGAEEAK VHNDAQS(84.36)FDY(84.36)DHDAFLGAEEAK 7 3 -3.4327 0 1941.6 0 0 2926.1 0 0 2252.6 0 0 2619.8 0 0 3214.9 0 0 2397.5 0 0 2864.3 0 0 3774 0 0 2658.7 0 0 51629 0 0 1838.4 0 0 2762.5 0 0 2261.5 0 0 2705.1 0 0 3200.6 0 0 2527.5 0 0 2926.8 0 0 5287.9 0 0 2632.1 0 0 48702 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 24648000 0 24648000 0 NaN 229 132 44 44 5130 5467 5823 6474 5823 6474 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17593 5823 6474 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17593 5823 6474 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17593 O43865 2 O43865 O43865 Putative adenosylhomocysteinase 2 AHCYL1 sp|O43865|SAHH2_HUMAN Putative adenosylhomocysteinase 2 OS=Homo sapiens GN=AHCYL1 PE=1 SV=2 1 138.936 2.75433E-07 138.94 117.38 138.94 1 S ______________MSMPDAMPLPGVGEELK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(1)MPDAMPLPGVGEELK S(138.94)MPDAMPLPGVGEELK 1 2 -0.022444 16322 0 0 11954 0 0 16130 0 0 14906 0 0 53802 0 0 14338 0 0 57059 0 0 33034 0 0 12378 0 0 107230 0 0 15444 0 0 11309 0 0 16721 0 0 15116 0 0 52378 0 0 14834 0 0 56701 0 0 35642 0 0 14108 0 0 101740 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 82570000 82570000 0 0 NaN 230 133 2 2 4032 4300;4301 4588;4589 5096;5097 4589 5097 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23715 4589 5097 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23715 4589 5097 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23715 O60231 160 O60231 O60231 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 DHX16 sp|O60231|DHX16_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Homo sapiens GN=DHX16 PE=1 SV=2 0.999702 35.2581 3.1831E-07 162.43 136.61 162.43 1 S KKKTGGSKQQTEKPESEDEWERTERERLQDL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPXXXXXXXXX QQTEKPES(1)EDEWER QQT(-35.26)EKPES(35.26)EDEWER 8 3 -0.25057 66057 0 0 82138 0 0 67635 0 0 77617 0 0 49050 0 0 70314 0 0 51506 0 0 66803 0 0 78735 0 0 8630.2 0 0 62513 0 0 77567 0 0 67791 0 0 79853 0 0 50934 0 0 70778 0 0 53056 0 0 67404 0 0 76533 0 0 9672.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 85120000 85120000 0 0 NaN 231 135 160 160 3121 3311 3541 3925 3541 3925 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10524 3541 3925 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10524 3541 3925 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10524 O60238 166 O60238 O60238 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like BNIP3L sp|O60238|BNI3L_HUMAN BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like OS=Homo sapiens GN=BNIP3L PE=1 SV=1 0.95819 14.3495 0.0125192 83.948 12.568 83.948 1 S IPPKEFHFRHPKRSVSLSMRKSGAMKKGGIF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX S(0.035)VS(0.958)LS(0.007)MR S(-14.35)VS(14.35)LS(-21.61)MR 3 2 -0.072027 23008 0 0 32651 0 0 27113 0 0 27101 0 0 44980 0 0 22515 0 0 44273 0 0 36130 0 0 32807 0 0 6709 0 0 21787 0 0 30812 0 0 27282 0 0 28092 0 0 44571 0 0 22956 0 0 44786 0 0 35915 0 0 32857 0 0 7153.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26719000 26719000 0 0 NaN 232 137 166 166 4567 4871 5188 5760 5188 5760 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13424 5188 5760 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13424 5188 5760 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13424 O60264 66 O60264 O60264 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 SMARCA5 sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 OS=Homo sapiens GN=SMARCA5 PE=1 SV=1 1 137.172 3.95368E-18 214.9 201.72 214.9 1 S AGPADAEMEEIFDDASPGKQKEIQEPDPTYE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX GGPEGVAAQAVASAASAGPADAEMEEIFDDAS(1)PGK GGPEGVAAQAVAS(-169.05)AAS(-137.17)AGPADAEMEEIFDDAS(137.17)PGK 32 4 -0.16538 4420.7 0 0 4754.1 0 0 4236.9 0 0 6370.3 0 0 5141.3 0 0 5037.3 0 0 3815.1 0 0 7637.4 0 0 5598.6 0 0 104070 0 0 4182.4 0 0 4500.2 0 0 4285.4 0 0 6420.7 0 0 5147 0 0 5337.2 0 0 3996 0 0 10696 0 0 5448.5 0 0 98167 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 90551000 90551000 0 0 NaN 233 138 66 66 1440 1517 1627 1797 1627 1797 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23520 1627 1797 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23520 1627 1797 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23520 O60264 137 O60264 O60264 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 SMARCA5 sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 OS=Homo sapiens GN=SMARCA5 PE=1 SV=1 0.994869 22.8759 0.0388396 55.196 34.326 55.196 1 S PGRPRIKKDEKQNLLSVGDYRHRRTEQEEDE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX QNLLS(0.995)VGDY(0.005)R QNLLS(22.88)VGDY(-22.88)R 5 2 1.422 10765 0 0 8725.6 0 0 10386 0 0 9711 0 0 7669.7 0 0 12789 0 0 10621 0 0 11408 0 0 8822.8 0 0 11627 0 0 10185 0 0 8248.4 0 0 10453 0 0 9960.3 0 0 7983.7 0 0 12686 0 0 10620 0 0 11847 0 0 8781.7 0 0 11212 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 3905700 3905700 0 0 NaN 234 138 137 137 3090 3278 3507 3887 3507 3887 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17843 3507 3887 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17843 3507 3887 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17843 O60264 116 O60264 O60264 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 SMARCA5 sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 OS=Homo sapiens GN=SMARCA5 PE=1 SV=1 0.96909 15.0249 0.00147649 115.86 69.527 115.86 1 S LFAHFIQPAAQKTPTSPLKMKPGRPRIKKDE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX TPT(0.03)S(0.969)PLK T(-33.44)PT(-15.02)S(15.02)PLK 4 2 -0.20321 91190 0 0 116600 0 0 90425 0 0 109590 0 0 78524 0 0 80052 0 0 82141 0 0 90814 0 0 120250 0 0 8179.4 0 0 86286 0 0 110110 0 0 90958 0 0 112470 0 0 80476 0 0 81708 0 0 84482 0 0 90922 0 0 117030 0 0 9803.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 2184200000 2184200000 0 0 NaN 235 138 116 116 4863 5188 5527 6145 5527 6145 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11968 5527 6145 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11968 5527 6145 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11968 O60271 733 O60271 O60271 C-Jun-amino-terminal kinase-interacting protein 4 SPAG9 sp|O60271|JIP4_HUMAN C-Jun-amino-terminal kinase-interacting protein 4 OS=Homo sapiens GN=SPAG9 PE=1 SV=4 0.97767 16.4131 5.55342E-23 270.95 232.57 270.95 1 S GLDTEGSKQRSASQSSLDKLDQELKEQQKEL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPXXXXXX SASQS(0.022)S(0.978)LDKLDQELK S(-97.39)AS(-68)QS(-16.41)S(16.41)LDKLDQELK 6 3 0.56283 11184 0 0 33461 0 0 13107 0 0 32841 0 0 15911 0 0 12529 0 0 16390 0 0 21588 0 0 36468 0 0 10301 0 0 10590 0 0 31606 0 0 13123 0 0 33431 0 0 16007 0 0 13598 0 0 17211 0 0 21614 0 0 35131 0 0 10199 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 52428000 52428000 0 0 NaN 236 139 733 733 3619 3847 4100 4557 4100 4557 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16812 4100 4557 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16812 4100 4557 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16812 O60293 352 O60293 O60293 Zinc finger C3H1 domain-containing protein ZFC3H1 sp|O60293|ZC3H1_HUMAN Zinc finger C3H1 domain-containing protein OS=Homo sapiens GN=ZFC3H1 PE=1 SV=3 0.941871 12.3314 5.01036E-07 156.88 108.87 156.88 1 S SQGLQDKEQNLTRRISTSDILSEKKLGEDEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX RIS(0.942)T(0.055)S(0.003)DILSEK RIS(12.33)T(-12.33)S(-24.87)DILS(-103.47)EK 3 3 -1.1364 8505.9 0 0 12104 0 0 9374.2 0 0 11446 0 0 9875.4 0 0 9165.7 0 0 11980 0 0 13016 0 0 12071 0 0 3012.1 0 0 8052 0 0 11431 0 0 9399.4 0 0 11756 0 0 10022 0 0 9343 0 0 12096 0 0 12998 0 0 11907 0 0 3137.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23257000 23257000 0 0 NaN 237 140 352 352 3286 3487 3724 4137 3724 4137 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16283 3724 4137 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16283 3724 4137 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16283 O60293 206 O60293 O60293 Zinc finger C3H1 domain-containing protein ZFC3H1 sp|O60293|ZC3H1_HUMAN Zinc finger C3H1 domain-containing protein OS=Homo sapiens GN=ZFC3H1 PE=1 SV=3 0.814778 6.47585 0.0299894 50.284 22.075 50.284 1 S REPSPPRKSSKSFGRSPSRKQNYSSKNENCV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX S(0.002)FGRS(0.815)PS(0.183)R S(-26.56)FGRS(6.48)PS(-6.48)R 5 3 -0.072436 17770 0 0 21060 0 0 19259 0 0 22392 0 0 16273 0 0 16743 0 0 16473 0 0 20129 0 0 23393 0 0 3236.7 0 0 16820 0 0 19902 0 0 19271 0 0 22819 0 0 16700 0 0 17083 0 0 16948 0 0 20157 0 0 22789 0 0 3513.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6128000 6128000 0 0 NaN 238 140 206 206 3745 3985 4249 4724 4249 4724 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6636 4249 4724 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6636 4249 4724 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6636 O60307 774 O60307 O60307 Microtubule-associated serine/threonine-protein kinase 3 MAST3 sp|O60307|MAST3_HUMAN Microtubule-associated serine/threonine-protein kinase 3 OS=Homo sapiens GN=MAST3 PE=1 SV=2 0.968828 14.9248 1.19485E-13 190.57 168.04 190.57 1 S GSSCQSSSSQPERGPSPSLLNTISLDTMPKF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX GPS(0.969)PS(0.031)LLNTISLDTMPK GPS(14.92)PS(-14.92)LLNT(-74.69)IS(-137.01)LDT(-178.53)MPK 3 3 0.97794 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 239 141 774 774 1564 1648 1781 1979 1781 1979 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22994 1781 1979 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22994 1781 1979 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22994 O60315 353 O60315 O60315 Zinc finger E-box-binding homeobox 2 ZEB2 sp|O60315|ZEB2_HUMAN Zinc finger E-box-binding homeobox 2 OS=Homo sapiens GN=ZEB2 PE=1 SV=1 0.864124 8.70397 4.35034E-08 162.47 136.33 145.19 1;2 S ISVNGRMRNNIKTGSSPNSVSSSPTNSAITQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP T(0.017)GS(0.118)S(0.864)PNS(0.001)VSS(0.081)S(0.917)PT(0.002)NSAITQLR T(-17.17)GS(-8.7)S(8.7)PNS(-29.85)VS(-43.61)S(-10.66)S(10.66)PT(-26.78)NS(-39.57)AIT(-57.91)QLR 4 3 -1.5066 9810.1 7111.9 0 9876.9 7295.9 0 13472 6514.7 0 8777.8 7036.8 0 14938 6879.3 0 12914 7640.9 0 11147 7485.5 0 11223 6984.4 0 12105 6900.6 0 8157.2 12160 0 9296.6 6727.4 0 9324.1 6890.7 0 13366 6599.9 0 9146.3 7250.7 0 15019 6967.6 0 12753 7646.6 0 11555 7574.5 0 11569 7397.7 0 11903 6833.6 0 7940.8 11612 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 67842000 56215000 11627000 0 NaN 240 142 353 353 4734 5048;5049 5380;5381 5983;5984 5381 5984 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14849 5380 5983 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13995 5380 5983 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13995 O60315 360 O60315 O60315 Zinc finger E-box-binding homeobox 2 ZEB2 sp|O60315|ZEB2_HUMAN Zinc finger E-box-binding homeobox 2 OS=Homo sapiens GN=ZEB2 PE=1 SV=1 0.96425 15.2625 1.3897E-07 145.19 110.94 136.37 1;2 S RNNIKTGSSPNSVSSSPTNSAITQLRNKLEN X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPPXXXXX TGSSPNSVSS(0.029)S(0.964)PT(0.007)NSAITQLR T(-92.2)GS(-92.63)S(-87.27)PNS(-70.01)VS(-43.2)S(-15.26)S(15.26)PT(-21.63)NS(-34.16)AIT(-52.37)QLR 11 3 0.28604 8581 7111.9 0 8803.3 7295.9 0 9602.3 6514.7 0 9013.9 7036.8 0 8354.1 6879.3 0 8503.4 7640.9 0 6656 7485.5 0 8348.8 6984.4 0 9795.8 6900.6 0 12201 12160 0 8123.7 6727.4 0 8317.4 6890.7 0 9591.8 6599.9 0 9234.1 7250.7 0 8530.4 6967.6 0 8567.2 7646.6 0 6942.8 7574.5 0 8748.1 7397.7 0 9532.4 6833.6 0 11682 11612 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 38142000 26515000 11627000 0 NaN 241 142 360 360 4734 5048;5049 5379;5381 5982;5984 5379 5982 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13636 5381 5984 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14849 5381 5984 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14849 O60315 705 O60315 O60315 Zinc finger E-box-binding homeobox 2 ZEB2 sp|O60315|ZEB2_HUMAN Zinc finger E-box-binding homeobox 2 OS=Homo sapiens GN=ZEB2 PE=1 SV=1 0.764635 5.51664 0.0051557 87.24 61.092 87.24 1 S EWFEQRKVYQYSNSRSPSLERSSKPLAPNSN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPXXXXXXXXXX VYQYSNS(0.02)RS(0.765)PS(0.215)LER VY(-71.49)QY(-63.54)S(-35.74)NS(-15.72)RS(5.52)PS(-5.52)LER 9 3 -0.2077 16093 0 0 8431 0 0 18079 0 0 9389.5 0 0 12531 0 0 18113 0 0 13715 0 0 15146 0 0 10454 0 0 23068 0 0 15236 0 0 7969.9 0 0 18025 0 0 9722.5 0 0 13058 0 0 17773 0 0 13814 0 0 16002 0 0 10453 0 0 22071 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22834000 22834000 0 0 NaN 242 142 705 705 5326 5674 6050 6724 6050 6724 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11092 6050 6724 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11092 6050 6724 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11092 O60333 1454 O60333 O60333 Kinesin-like protein KIF1B KIF1B sp|O60333|KIF1B_HUMAN Kinesin-like protein KIF1B OS=Homo sapiens GN=KIF1B PE=1 SV=5 0.988686 19.534 2.34547E-07 169.82 145.53 169.82 1 S TGIYELSLCKMSDTGSPGMQRRRRKILDTSV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX MSDT(0.011)GS(0.989)PGMQR MS(-35.07)DT(-19.53)GS(19.53)PGMQR 6 2 -0.33566 10916 0 0 21652 0 0 12705 0 0 19268 0 0 21092 0 0 13174 0 0 21582 0 0 18255 0 0 20399 0 0 4580.8 0 0 10336 0 0 20441 0 0 12794 0 0 19831 0 0 20915 0 0 13549 0 0 21913 0 0 18252 0 0 20178 0 0 4735.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15361000 15361000 0 0 NaN 243 143 1454 1454 2741 2907 3117 3464 3117 3464 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8297 3117 3464 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8297 3117 3464 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8297 O60333 1057 O60333 O60333 Kinesin-like protein KIF1B KIF1B sp|O60333|KIF1B_HUMAN Kinesin-like protein KIF1B OS=Homo sapiens GN=KIF1B PE=1 SV=5 0.994309 22.4232 0.000534142 109.72 48.368 109.72 1 S NQSDFSSVAMTRSGLSLEELRIVEGQGQSSE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX S(0.006)GLS(0.994)LEELR S(-22.42)GLS(22.42)LEELR 4 2 -0.092828 8337.7 0 0 16749 0 0 8705.4 0 0 16791 0 0 21872 0 0 9606.8 0 0 23072 0 0 18526 0 0 15800 0 0 7781.9 0 0 7891 0 0 15822 0 0 8908.2 0 0 17122 0 0 21429 0 0 10076 0 0 23229 0 0 18472 0 0 15898 0 0 7756.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22220000 22220000 0 0 NaN 244 143 1057 1057 3789 4036 4305 4784 4305 4784 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17406 4305 4784 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17406 4305 4784 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17406 O60341 849 O60341 O60341 Lysine-specific histone demethylase 1A KDM1A sp|O60341|KDM1A_HUMAN Lysine-specific histone demethylase 1A OS=Homo sapiens GN=KDM1A PE=1 SV=2 0.998884 29.518 1.71011E-10 191.84 178.16 191.84 1 S YTLPRQATPGVPAQQSPSM____________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPXXXXXXXXXXXX QATPGVPAQQS(0.999)PS(0.001)M QAT(-159.18)PGVPAQQS(29.52)PS(-29.52)M 11 2 -0.049732 22847 0 0 18452 0 0 21067 0 0 22909 0 0 23821 0 0 23681 0 0 23993 0 0 23727 0 0 23174 0 0 23524 0 0 21613 0 0 17456 0 0 21349 0 0 23263 0 0 24012 0 0 23747 0 0 24392 0 0 24507 0 0 22901 0 0 22700 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 47596000 47596000 0 0 NaN 245 144 849 849 3002 3182;3183 3405;3406 3776;3777 3405 3776 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9163 3405 3776 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9163 3405 3776 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9163 O60343 666 O60343 O60343 TBC1 domain family member 4 TBC1D4 sp|O60343|TBCD4_HUMAN TBC1 domain family member 4 OS=Homo sapiens GN=TBC1D4 PE=1 SV=2 1 94.6877 0.00227458 94.688 38.565 94.688 1 S KRKLNLQDGRAQGVRSPLLRQSSSEQCSNLS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX AQGVRS(1)PLLR AQGVRS(94.69)PLLR 6 3 0.22367 13367 0 0 5772.5 0 0 13131 0 0 6864.7 0 0 24064 0 0 13683 0 0 23709 0 0 13651 0 0 5248 0 0 1718.2 0 0 12647 0 0 5459.3 0 0 13369 0 0 7091.3 0 0 23752 0 0 13413 0 0 23645 0 0 13746 0 0 5961.2 0 0 1933.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 41282000 41282000 0 0 NaN 246 145 666 666 393 420 455 504 455 504 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10356 455 504 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10356 455 504 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10356 O60343 106 O60343 O60343 TBC1 domain family member 4 TBC1D4 sp|O60343|TBCD4_HUMAN TBC1 domain family member 4 OS=Homo sapiens GN=TBC1D4 PE=1 SV=2 0.882559 8.77283 7.22826E-12 183.31 164.81 183.31 1 S LRCVPAPGAGASGGTSPSATQPNPAVFIFEH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPPPPPPPPPPP CVPAPGAGASGGT(0.117)S(0.883)PSATQPNPAVFIFEHK CVPAPGAGAS(-43.58)GGT(-8.77)S(8.77)PS(-34.44)AT(-49.36)QPNPAVFIFEHK 14 4 -0.84164 5922.2 0 0 7622.4 0 0 7839.2 0 0 8149.6 0 0 15507 0 0 7456.7 0 0 14325 0 0 11623 0 0 8632.9 0 0 32825 0 0 5611.1 0 0 7203.6 0 0 7875 0 0 8324.5 0 0 15262 0 0 7619.2 0 0 14482 0 0 12486 0 0 8759.5 0 0 31178 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 34147000 34147000 0 0 NaN 247 145 106 106 628 669 713 791;792 713 792 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22880 713 792 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22880 713 792 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22880 O60343 341 O60343 O60343 TBC1 domain family member 4 TBC1D4 sp|O60343|TBCD4_HUMAN TBC1 domain family member 4 OS=Homo sapiens GN=TBC1D4 PE=1 SV=2 0.999849 38.2097 6.39381E-16 228.08 199.54 228.08 1 S VHEGSQKSQPRRRHASAPSHVQPSDSEKNRT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX HAS(1)APSHVQPSDSEK HAS(38.21)APS(-38.21)HVQPS(-141.87)DS(-166.32)EK 3 3 -0.040271 36940 0 0 32865 0 0 41220 0 0 26823 0 0 72287 0 0 49614 0 0 140700 0 0 78966 0 0 30652 0 0 7094.9 0 0 34970 0 0 31012 0 0 41769 0 0 28276 0 0 72386 0 0 49095 0 0 136920 0 0 78285 0 0 34912 0 0 8508.3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 84567000 84567000 0 0 NaN 248 145 341 341 1696 1788 1930;1931 2150;2151;2152 1930 2150 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6604 1930 2150 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6604 1930 2150 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6604 O60343 588 O60343 O60343 TBC1 domain family member 4 TBC1D4 sp|O60343|TBCD4_HUMAN TBC1 domain family member 4 OS=Homo sapiens GN=TBC1D4 PE=1 SV=2 0.994221 22.3562 4.90806E-06 155.48 84.985 155.48 1 S NIFSRGANRMRGRLGSVDSFERSNSLASEKD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX LGS(0.994)VDS(0.006)FER LGS(22.36)VDS(-22.36)FER 3 2 -0.93771 21413 0 0 9443.3 0 0 20147 0 0 8048.5 0 0 47364 0 0 20678 0 0 52284 0 0 26483 0 0 8747.9 0 0 6577.8 0 0 20258 0 0 8912.8 0 0 20702 0 0 8552 0 0 46486 0 0 20248 0 0 51792 0 0 26537 0 0 10478 0 0 6806.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 36830000 36830000 0 0 NaN 249 145 588 588 2392 2529 2722 3040 2722 3040 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16000 2722 3040 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16000 2722 3040 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16000 O60343 570 O60343 O60343 TBC1 domain family member 4 TBC1D4 sp|O60343|TBCD4_HUMAN TBC1 domain family member 4 OS=Homo sapiens GN=TBC1D4 PE=1 SV=2 0.93912 12.2907 8.27713E-16 213.94 189.44 213.94 1 S KLDILKNKAKRSLTSSLENIFSRGANRMRGR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX SLT(0.005)S(0.055)S(0.939)LENIFSR S(-49.38)LT(-22.36)S(-12.29)S(12.29)LENIFS(-118.59)R 5 2 0.028551 15616 0 0 12018 0 0 14672 0 0 11462 0 0 55904 0 0 15107 0 0 58727 0 0 29641 0 0 10560 0 0 28088 0 0 14773 0 0 11350 0 0 15338 0 0 11862 0 0 54292 0 0 15215 0 0 58325 0 0 30015 0 0 12463 0 0 27134 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 59222000 59222000 0 0 NaN 250 145 570 570 4015 4281 4569 5077 4569 5077 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22620 4569 5077 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22620 4569 5077 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22620 O60499 132 O60499 O60499 Syntaxin-10 STX10 sp|O60499|STX10_HUMAN Syntaxin-10 OS=Homo sapiens GN=STX10 PE=1 SV=1 0.5 0 0.00320168 92.897 79.469 92.897 1 S RNNREILAGKPAAQKSPSDLLDASAVSATSR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.5)PS(0.5)DLLDASAVSATSR S(0)PS(0)DLLDAS(-71.53)AVS(-87.9)AT(-92.06)S(-92.08)R 1 3 -0.53888 3352.7 0 0 4868.3 0 0 3710.3 0 0 5914.4 0 0 4349.3 0 0 3949.4 0 0 3959.5 0 0 5629 0 0 5902.8 0 0 4576.3 0 0 3173.9 0 0 4604.9 0 0 3722.6 0 0 5977.3 0 0 4372.3 0 0 4076 0 0 4102.4 0 0 5719.1 0 0 5741.9 0 0 4439.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7379500 7379500 0 0 NaN 251 147 132 132 4169 4444 4736 5255 4736 5255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18408 4736 5255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18408 4736 5255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18408 O60499 134 O60499 O60499 Syntaxin-10 STX10 sp|O60499|STX10_HUMAN Syntaxin-10 OS=Homo sapiens GN=STX10 PE=1 SV=1 0.5 0 0.00320168 92.897 79.469 92.897 1 S NREILAGKPAAQKSPSDLLDASAVSATSRYI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.5)PS(0.5)DLLDASAVSATSR S(0)PS(0)DLLDAS(-71.53)AVS(-87.9)AT(-92.06)S(-92.08)R 3 3 -0.53888 3352.7 0 0 4868.3 0 0 3710.3 0 0 5914.4 0 0 4349.3 0 0 3949.4 0 0 3959.5 0 0 5629 0 0 5902.8 0 0 4576.3 0 0 3173.9 0 0 4604.9 0 0 3722.6 0 0 5977.3 0 0 4372.3 0 0 4076 0 0 4102.4 0 0 5719.1 0 0 5741.9 0 0 4439.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7379500 7379500 0 0 NaN 252 147 134 134 4169 4444 4736 5255 4736 5255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18408 4736 5255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18408 4736 5255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18408 O60506;O43390 249;252 O60506 O60506 Heterogeneous nuclear ribonucleoprotein Q;Heterogeneous nuclear ribonucleoprotein R SYNCRIP;HNRNPR sp|O60506|HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens GN=SYNCRIP PE=1 SV=2;sp|O43390|HNRPR_HUMAN Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens GN=HNRNPR PE=1 SV=1 1 88.6806 0.00854705 88.681 64.345 88.681 1 S IGVCISVANNRLFVGSIPKSKTKEQILEEFS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX LFVGS(1)IPK LFVGS(88.68)IPK 5 2 -1.3452 7792.4 0 0 7578.7 0 0 7037.2 0 0 7757.7 0 0 7706.5 0 0 7674.2 0 0 7787.3 0 0 9979.4 0 0 7864 0 0 17536 0 0 7370.8 0 0 7160.4 0 0 7137.8 0 0 7953.1 0 0 7782.3 0 0 7757.9 0 0 7925.1 0 0 10449 0 0 7756.2 0 0 16743 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6982500 6982500 0 0 NaN 253 148 249 249 2355 2488 2677 2990 2677 2990 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21589 2677 2990 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21589 2677 2990 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21589 O60508 45 O60508 O60508 Pre-mRNA-processing factor 17 CDC40 sp|O60508|PRP17_HUMAN Pre-mRNA-processing factor 17 OS=Homo sapiens GN=CDC40 PE=1 SV=1 0.355678 0 2.53883E-11 187.17 155.37 187.17 S PLPAADSLMHLTKSPSSKPSLAVAVDSAPEV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.269)PS(0.356)S(0.356)KPS(0.019)LAVAVDSAPEVAVK S(-1.21)PS(0)S(0)KPS(-12.64)LAVAVDS(-90.66)APEVAVK 3 4 0.1451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 254 149 45 45 4196 4472 4766 5291 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19145 4766 5291 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19145 4766 5291 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19145 O60508 46 O60508 O60508 Pre-mRNA-processing factor 17 CDC40 sp|O60508|PRP17_HUMAN Pre-mRNA-processing factor 17 OS=Homo sapiens GN=CDC40 PE=1 SV=1 0.355678 0 2.53883E-11 187.17 155.37 187.17 S LPAADSLMHLTKSPSSKPSLAVAVDSAPEVA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.269)PS(0.356)S(0.356)KPS(0.019)LAVAVDSAPEVAVK S(-1.21)PS(0)S(0)KPS(-12.64)LAVAVDS(-90.66)APEVAVK 4 4 0.1451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 255 149 46 46 4196 4472 4766 5291 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19145 4766 5291 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19145 4766 5291 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19145 O60524 417 O60524 O60524 Nuclear export mediator factor NEMF NEMF sp|O60524|NEMF_HUMAN Nuclear export mediator factor NEMF OS=Homo sapiens GN=NEMF PE=1 SV=4 1 112.076 2.01992E-25 272.34 251.06 272.34 1 S QTNHVTMLLRNPYLLSEEEDDDVDGDVNVEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP NPYLLS(1)EEEDDDVDGDVNVEKNETEPPK NPY(-112.08)LLS(112.08)EEEDDDVDGDVNVEKNET(-229.19)EPPK 6 4 0.23098 5053.3 0 0 5219.8 0 0 4438.5 0 0 6578.3 0 0 5030.8 0 0 6005.8 0 0 5756.3 0 0 10379 0 0 6563.6 0 0 133580 0 0 4779.4 0 0 4938.7 0 0 4513.3 0 0 6662.3 0 0 5081.3 0 0 6351.9 0 0 5846.6 0 0 14266 0 0 6442.1 0 0 126030 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 27251000 27251000 0 0 NaN 256 150 417 417 2889 3063 3280 3636;3637 3280 3637 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17866 3280 3637 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17866 3280 3637 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17866 O60566 1043 O60566 O60566 Mitotic checkpoint serine/threonine-protein kinase BUB1 beta BUB1B sp|O60566|BUB1B_HUMAN Mitotic checkpoint serine/threonine-protein kinase BUB1 beta OS=Homo sapiens GN=BUB1B PE=1 SV=3 0.912707 10.1935 1.48366E-09 187.97 173.56 187.97 1 S QSHLNKALWKVGKLTSPGALLFQ________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX LT(0.087)S(0.913)PGALLFQ LT(-10.19)S(10.19)PGALLFQ 3 2 0.28439 4004.2 0 0 5809.1 0 0 3788.1 0 0 6154.9 0 0 3610.6 0 0 3453.8 0 0 3926.3 0 0 5139 0 0 6388.1 0 0 23080 0 0 3788.1 0 0 5489.6 0 0 3825.2 0 0 6255.2 0 0 3681.3 0 0 3647 0 0 4048.9 0 0 5784.9 0 0 6198.7 0 0 21852 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22390000 22390000 0 0 NaN 257 151 1043 1043 2636 2783 2984 3321 2984 3321 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24211 2984 3321 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24211 2984 3321 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24211 O60664 31 O60664 O60664 Perilipin-3 PLIN3 sp|O60664|PLIN3_HUMAN Perilipin-3 OS=Homo sapiens GN=PLIN3 PE=1 SV=3 0.999999 60.0507 1.1542E-08 170.58 150.49 170.58 1 S VEEPVQQPSVVDRVASMPLISSTCDMVSAAY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP VAS(1)MPLISSTCDMVSAAYASTK VAS(60.05)MPLIS(-60.05)S(-84.54)T(-89.6)CDMVS(-134.6)AAY(-150.32)AS(-162.95)T(-164.81)K 3 3 -0.39514 36902 0 0 33114 0 0 41118 0 0 34021 0 0 17597 0 0 41708 0 0 26661 0 0 44230 0 0 37541 0 0 83487 0 0 34934 0 0 31287 0 0 40890 0 0 34999 0 0 19385 0 0 41652 0 0 27001 0 0 46784 0 0 36580 0 0 79636 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 156810000 156810000 0 0 NaN 258 152 31 31 5054 5388 5740 6379 5740 6379 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23848 5740 6379 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23848 5740 6379 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23848 O60664 130 O60664 O60664 Perilipin-3 PLIN3 sp|O60664|PLIN3_HUMAN Perilipin-3 OS=Homo sapiens GN=PLIN3 PE=1 SV=3 1 72.3169 1.46426E-05 136.63 95.862 136.63 1 S EKVLADTKELVSSKVSGAQEMVSSAKDTVAT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPXXXXX VS(1)GAQEMVSSAK VS(72.32)GAQEMVS(-72.32)S(-75.1)AK 2 2 -0.11078 23504 0 0 10554 0 0 24748 0 0 9999.7 0 0 7380.3 0 0 25348 0 0 10977 0 0 16449 0 0 10099 0 0 16483 0 0 22245 0 0 9966.6 0 0 24642 0 0 10548 0 0 8565.1 0 0 24642 0 0 10976 0 0 17341 0 0 10002 0 0 15902 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21608000 21608000 0 0 NaN 259 152 130 130 5246 5592 5961 6625 5961 6625 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15561 5961 6625 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15561 5961 6625 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15561 O60684 6 O60684 O60684 Importin subunit alpha-7 KPNA6 sp|O60684|IMA7_HUMAN Importin subunit alpha-7 OS=Homo sapiens GN=KPNA6 PE=1 SV=1 0.972296 15.4525 1.26165E-10 96.551 87.662 96.551 1 S __________METMASPGKDNYRMKSYKNNA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPXXXXXXXX MET(0.028)MAS(0.972)PGKDNYR MET(-15.45)MAS(15.45)PGKDNY(-95.19)R 6 2 -1.6345 9877.3 0 0 15417 0 0 10477 0 0 16096 0 0 10793 0 0 8698.9 0 0 12525 0 0 14723 0 0 17531 0 0 10540 0 0 9348.7 0 0 14567 0 0 10522 0 0 16367 0 0 10963 0 0 9144.8 0 0 12803 0 0 14852 0 0 17085 0 0 10266 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16535000 16535000 0 0 NaN 260 153 6 6 2690 2847 3054 3400 3054 3400 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13426 3054 3400 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13426 3054 3400 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13426 O60749 119 O60749 O60749 Sorting nexin-2 SNX2 sp|O60749|SNX2_HUMAN Sorting nexin-2 OS=Homo sapiens GN=SNX2 PE=1 SV=2 0.989655 19.8076 1.06393E-06 166.16 124.76 166.16 1 S TPTTLIAPRIESKSMSAPVIFDRSREEIEEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX S(0.01)MS(0.99)APVIFDR S(-19.81)MS(19.81)APVIFDR 3 2 0.041467 19572 0 0 16951 0 0 18429 0 0 18166 0 0 9659.4 0 0 18716 0 0 9259.6 0 0 15924 0 0 18971 0 0 12745 0 0 18516 0 0 16020 0 0 18515 0 0 18587 0 0 10324 0 0 18724 0 0 9710.7 0 0 16465 0 0 18307 0 0 12370 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 96588000 96588000 0 0 NaN 261 154 119 119 4034 4303 4591 5099 4591 5099 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18735 4591 5099 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18735 4591 5099 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18735 O60762 7 O60762 O60762 Dolichol-phosphate mannosyltransferase subunit 1 DPM1 sp|O60762|DPM1_HUMAN Dolichol-phosphate mannosyltransferase subunit 1 OS=Homo sapiens GN=DPM1 PE=1 SV=1 0.595285 1.67834 0.000218617 56.936 28.84 56.936 1 S _________MASLEVSRSPRRSRRELEVRSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX ASLEVS(0.595)RS(0.404)PRR AS(-33.92)LEVS(1.68)RS(-1.68)PRR 6 2 0.19588 9772.4 0 0 11814 0 0 11255 0 0 11609 0 0 11404 0 0 10885 0 0 11257 0 0 11337 0 0 12391 0 0 3567.7 0 0 9252.8 0 0 11159 0 0 11250 0 0 11921 0 0 11563 0 0 10955 0 0 11497 0 0 11462 0 0 12178 0 0 3621.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 38388000 38388000 0 0 NaN 262 155 7 7 470;471 500;501 538 602 538 602 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7348 538 602 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7348 538 602 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7348 O60762 9 O60762 O60762 Dolichol-phosphate mannosyltransferase subunit 1 DPM1 sp|O60762|DPM1_HUMAN Dolichol-phosphate mannosyltransferase subunit 1 OS=Homo sapiens GN=DPM1 PE=1 SV=1 0.975428 15.9876 6.18944E-10 130.99 87.909 130.99 1 S _______MASLEVSRSPRRSRRELEVRSPRQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX ASLEVS(0.025)RS(0.975)PR AS(-110.16)LEVS(-15.99)RS(15.99)PR 8 2 -0.037987 24154 0 0 12118 0 0 28346 0 0 11970 0 0 13114 0 0 22851 0 0 14115 0 0 11989 0 0 10515 0 0 2256.7 0 0 22872 0 0 11447 0 0 28117 0 0 12474 0 0 14218 0 0 22287 0 0 14221 0 0 12514 0 0 10528 0 0 2402.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 180070000 180070000 0 0 NaN 263 155 9 9 470;471 500;501 537 601 537 601 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9030 537 601 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9030 537 601 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9030 Q99880;Q99879;Q99877;Q93079;Q8N257;Q5QNW6;Q16778;P62807;P58876;P57053;P33778;P23527;P06899;O60814;Q96A08 113;113;113;113;113;113;113;113;113;113;113;113;113;113;114 Q99880 Q99880 Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 3-B;Histone H2B type 2-F;Histone H2B type 2-E;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 1-K;Histone H2B type 1-A HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST3H2BB;HIST2H2BF;HIST2H2BE;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST1H2BK;HIST1H2BA sp|Q99880|H2B1L_HUMAN Histone H2B type 1-L OS=Homo sapiens GN=HIST1H2BL PE=1 SV=3;sp|Q99879|H2B1M_HUMAN Histone H2B type 1-M OS=Homo sapiens GN=HIST1H2BM PE=1 SV=3;sp|Q99877|H2B1N_HUMAN Histone H2B type 1-N OS=Homo sapiens GN=HIST1H2BN PE=1 SV=3;sp|Q93079| 0.999708 35.3472 0.00107756 113.44 73.898 113.44 1 S AVRLLLPGELAKHAVSEGTKAVTKYTSSK__ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX HAVS(1)EGTK HAVS(35.35)EGT(-35.35)K 4 2 0.38687 26414 0 0 26431 0 0 27182 0 0 27742 0 0 31338 0 0 27336 0 0 32133 0 0 28908 0 0 28269 0 0 5060.3 0 0 24998 0 0 24976 0 0 27379 0 0 28398 0 0 31564 0 0 27448 0 0 32565 0 0 29088 0 0 28057 0 0 5433.9 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 27198000 27198000 0 0 1.0725 264 156 113 113 1698 1791 1934;1935 2155;2156 1934 2155 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6473 1934 2155 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6473 1934 2155 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6473 Q99880;Q99879;Q99877;Q93079;Q8N257;Q5QNW6;Q16778;P62807;P58876;P57053;P33778;P23527;P06899;O60814;Q96A08 56;56;56;56;56;56;56;56;56;56;56;56;56;56;57 Q99880 Q99880 Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 3-B;Histone H2B type 2-F;Histone H2B type 2-E;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 1-K;Histone H2B type 1-A HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST3H2BB;HIST2H2BF;HIST2H2BE;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST1H2BK;HIST1H2BA sp|Q99880|H2B1L_HUMAN Histone H2B type 1-L OS=Homo sapiens GN=HIST1H2BL PE=1 SV=3;sp|Q99879|H2B1M_HUMAN Histone H2B type 1-M OS=Homo sapiens GN=HIST1H2BM PE=1 SV=3;sp|Q99877|H2B1N_HUMAN Histone H2B type 1-N OS=Homo sapiens GN=HIST1H2BN PE=1 SV=3;sp|Q93079| 0.951965 12.9871 0.000103301 116.86 92.071 116.86 1 S YVYKVLKQVHPDTGISSKAMGIMNSFVNDIF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX QVHPDTGIS(0.952)S(0.048)K QVHPDT(-37.21)GIS(12.99)S(-12.99)K 9 3 -0.33195 41112 0 0 47639 0 0 40020 0 0 43492 0 0 55692 0 0 40910 0 0 50415 0 0 47588 0 0 55376 0 0 5162.6 0 0 38898 0 0 44979 0 0 40542 0 0 44868 0 0 55521 0 0 41215 0 0 51708 0 0 47631 0 0 54429 0 0 5962.5 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 67372000 67372000 0 0 NaN 265 156 56 56 3166 3358 3589;3590 3979;3980 3590 3980 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9713 3590 3980 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9713 3590 3980 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9713 O60825 493 O60825 O60825 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase PFKFB2 sp|O60825|F262_HUMAN 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 OS=Homo sapiens GN=PFKFB2 PE=1 SV=2 1 40.0661 0.000205555 102.48 76.356 40.066 1 S RPRNYSVGSRPLKPLSPLRAQDMQEGAD___ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPXXXXXXXXXXXX PLKPLS(1)PLR PLKPLS(40.07)PLR 6 3 0.26988 11104 0 0 39097 0 0 9409.2 0 0 38671 0 0 23971 0 0 10711 0 0 25454 0 0 27021 0 0 45320 0 0 14510 0 0 10501 0 0 36931 0 0 9753.1 0 0 39283 0 0 23506 0 0 12216 0 0 26383 0 0 26909 0 0 43875 0 0 14289 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 54102000 54102000 0 0 NaN 266 157 493 493 2971;2981 3150;3160 3372;3373;3383 3738;3739;3753 3383 3753 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16749 3372 3738 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15487 3372 3738 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15487 O60825 466 O60825 O60825 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase PFKFB2 sp|O60825|F262_HUMAN 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 OS=Homo sapiens GN=PFKFB2 PE=1 SV=2 0.999953 43.3095 6.12691E-07 153.68 106.75 153.68 1 S NNFPKNQTPVRMRRNSFTPLSSSNTIRRPRN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX RNS(1)FTPLSSSNTIR RNS(43.31)FT(-43.31)PLS(-92.73)S(-101.74)S(-106.06)NT(-124.72)IR 3 3 0.16544 8434.4 0 0 13858 0 0 7396.2 0 0 14911 0 0 12190 0 0 8485.6 0 0 14427 0 0 12801 0 0 13929 0 0 4479.9 0 0 7977.2 0 0 13097 0 0 7570.1 0 0 15142 0 0 12118 0 0 8854.8 0 0 14564 0 0 12808 0 0 13765 0 0 4514.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 52735000 52735000 0 0 NaN 267 157 466 466 3360 3563 3801 4219 3801 4219 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13042 3801 4219 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13042 3801 4219 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13042 O60825 13 O60825 O60825 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase PFKFB2 sp|O60825|F262_HUMAN 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 OS=Homo sapiens GN=PFKFB2 PE=1 SV=2 0.47344 0 0.0441533 44.238 28.717 44.238 S ___MSGASSSEQNNNSYETKTPNLRMSEKKC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPXXXXXXXXXXX SGAS(0.001)S(0.005)S(0.047)EQNNNS(0.473)Y(0.001)ET(0.473)K S(-40.27)GAS(-26.18)S(-20.21)S(-10.06)EQNNNS(0)Y(-27.88)ET(0)K 12 3 -1.14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 268 157 13 13 3774 4015 4280 4755 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6300 4280 4755 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6300 4280 4755 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6300 O60828 247 O60828 O60828 Polyglutamine-binding protein 1 PQBP1 sp|O60828|PQBP1_HUMAN Polyglutamine-binding protein 1 OS=Homo sapiens GN=PQBP1 PE=1 SV=1 0.999981 48.6881 0.00373553 91.779 69.126 91.779 1 S DTTAAGPLFQQRPYPSPGAVLRANAEASRTK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPXXXXXXXXX TGADTTAAGPLFQQRPYPS(1)PGAVLR T(-63.79)GADT(-59.94)T(-54.36)AAGPLFQQRPY(-48.69)PS(48.69)PGAVLR 19 3 1.1985 8103.7 0 0 12990 0 0 9457.4 0 0 12943 0 0 7314.9 0 0 9059 0 0 7409.8 0 0 10982 0 0 12947 0 0 19081 0 0 7673.3 0 0 12271 0 0 9419.2 0 0 13230 0 0 7556.2 0 0 9313.7 0 0 7689.6 0 0 11516 0 0 12540 0 0 18221 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27541000 27541000 0 0 NaN 269 158 247 247 4715 5026 5353 5948 5353 5948 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19652 5353 5948 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19652 5353 5948 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19652 O60832 494 O60832 O60832 H/ACA ribonucleoprotein complex subunit 4 DKC1 sp|O60832|DKC1_HUMAN H/ACA ribonucleoprotein complex subunit 4 OS=Homo sapiens GN=DKC1 PE=1 SV=3 0.886334 10.4153 7.87829E-05 107.15 86.772 107.15 1 S AKAGLESGAEPGDGDSDTTKKKKKKKKAKEV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPXXXXXXXXXXX AGLESGAEPGDGDS(0.886)DT(0.081)T(0.033)K AGLES(-65.29)GAEPGDGDS(10.42)DT(-10.42)T(-14.28)K 14 3 -0.31964 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 270 159 494 494 210 220 238 266 238 266 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11367 238 266 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11367 238 266 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11367 O60832 513 O60832 O60832 H/ACA ribonucleoprotein complex subunit 4 DKC1 sp|O60832|DKC1_HUMAN H/ACA ribonucleoprotein complex subunit 4 OS=Homo sapiens GN=DKC1 PE=1 SV=3 1 155.817 3.01764E-05 155.82 150.96 155.82 1 S KKKKKKKKAKEVELVSE______________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPXXXXXXXXXXXXXX EVELVS(1)E EVELVS(155.82)E 6 2 0.19781 157380 0 0 218680 0 0 155840 0 0 232980 0 0 149240 0 0 157700 0 0 168320 0 0 187360 0 0 249100 0 0 52304 0 0 148910 0 0 206660 0 0 156970 0 0 237140 0 0 152180 0 0 161910 0 0 172630 0 0 188370 0 0 242360 0 0 53587 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 662710000 662710000 0 0 NaN 271 159 513 513 266;1207 287;1270 308;1369 342;343;1517;1518;1519 1369 1518 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15341 1369 1518 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15341 1369 1518 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15341 O60832 451 O60832 O60832 H/ACA ribonucleoprotein complex subunit 4 DKC1 sp|O60832|DKC1_HUMAN H/ACA ribonucleoprotein complex subunit 4 OS=Homo sapiens GN=DKC1 PE=1 SV=3 0.744384 5.70188 9.15958E-08 155.11 130.28 155.11 1 S QVVAEAAKTAKRKRESESESDETPPAAPQLI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP KRES(0.744)ES(0.2)ES(0.054)DET(0.001)PPAAPQLIK KRES(5.7)ES(-5.7)ES(-11.38)DET(-28.21)PPAAPQLIK 4 4 0.29201 7198.9 0 0 8527.7 0 0 6536.1 0 0 8365.3 0 0 6127 0 0 7609.5 0 0 6875.1 0 0 7337.6 0 0 10420 0 0 11412 0 0 6809.5 0 0 8054.9 0 0 6616 0 0 8587 0 0 6255.7 0 0 7679.2 0 0 7059.4 0 0 7714.5 0 0 10131 0 0 10916 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14750000 14750000 0 0 NaN 272 159 451 451 2194 2318 2495 2781 2495 2781 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14016 2495 2781 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14016 2495 2781 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14016 O60841 1168 O60841 O60841 Eukaryotic translation initiation factor 5B EIF5B sp|O60841|IF2P_HUMAN Eukaryotic translation initiation factor 5B OS=Homo sapiens GN=EIF5B PE=1 SV=4 1 90.4121 0.003603 90.412 71.632 90.412 1 S KGQEVCVKIEPIPGESPKMFGRHFEATDILV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX IEPIPGES(1)PK IEPIPGES(90.41)PK 8 3 0.070244 4892.3 0 0 7196.9 0 0 5326.5 0 0 8107.1 0 0 4348.4 0 0 4465.2 0 0 4364.6 0 0 6053.1 0 0 7983.9 0 0 1616 0 0 4631 0 0 6803.8 0 0 5326.6 0 0 8210 0 0 4474.2 0 0 4661.2 0 0 4541.1 0 0 6058.8 0 0 7724.2 0 0 1661.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12816000 12816000 0 0 NaN 273 160 1168 1168 1820 1921 2075 2325 2075 2325 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15962 2075 2325 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15962 2075 2325 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15962 O60841 164 O60841 O60841 Eukaryotic translation initiation factor 5B EIF5B sp|O60841|IF2P_HUMAN Eukaryotic translation initiation factor 5B OS=Homo sapiens GN=EIF5B PE=1 SV=4 1 86.7226 1.06956E-40 327.79 259.27 327.79 1 S KAKGKAQKSNKKWDGSEEDEDNSKKIKERSR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPXXXXXX WDGS(1)EEDEDNSK WDGS(86.72)EEDEDNS(-86.72)K 4 2 -0.21221 131540 0 0 139410 0 0 133210 0 0 136410 0 0 89550 0 0 128460 0 0 99458 0 0 127790 0 0 144580 0 0 37945 0 0 124480 0 0 131680 0 0 133530 0 0 140120 0 0 93636 0 0 129180 0 0 102000 0 0 129350 0 0 140750 0 0 38687 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 221600000 221600000 0 0 NaN 274 160 164 164 2275;5332;5333 2404;5680;5681 2587;6056;6057;6058;6059 2890;6730;6731;6732;6733 6056 6730 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12168 6056 6730 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12168 6056 6730 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12168 O60841 214 O60841 O60841 Eukaryotic translation initiation factor 5B EIF5B sp|O60841|IF2P_HUMAN Eukaryotic translation initiation factor 5B OS=Homo sapiens GN=EIF5B PE=1 SV=4 1 88.3349 1.47469E-41 332.25 297.33 332.25 1 S GQKKNQKNKPGPNIESGNEDDDASFKIKTVA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPXXXXX NKPGPNIES(1)GNEDDDASFK NKPGPNIES(88.33)GNEDDDAS(-88.33)FK 9 3 -0.18798 99795 0 0 93901 0 0 103110 0 0 90075 0 0 67133 0 0 102540 0 0 69712 0 0 90868 0 0 103550 0 0 38357 0 0 94444 0 0 88683 0 0 103200 0 0 92920 0 0 70319 0 0 102150 0 0 71764 0 0 92755 0 0 100740 0 0 38221 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 320380000 320380000 0 0 NaN 275 160 214 214 2837 3007 3220;3221 3573;3574;3575;3576 3220 3573 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13710 3220 3573 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13710 3220 3573 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13710 O60841 113 O60841 O60841 Eukaryotic translation initiation factor 5B EIF5B sp|O60841|IF2P_HUMAN Eukaryotic translation initiation factor 5B OS=Homo sapiens GN=EIF5B PE=1 SV=4 1 80.1322 7.81151E-11 189.09 166.63 189.09 1 S KKGQKGKKQSFDDNDSEELEDKDSKSKKTAK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPXXXXXX QSFDDNDS(1)EELEDKDSK QS(-80.52)FDDNDS(80.13)EELEDKDS(-80.13)K 8 3 -1.0061 13123 0 0 20333 0 0 13624 0 0 21241 0 0 13077 0 0 13231 0 0 12102 0 0 18212 0 0 24307 0 0 12909 0 0 12420 0 0 19213 0 0 13681 0 0 21626 0 0 13301 0 0 13706 0 0 12699 0 0 18464 0 0 23466 0 0 12577 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21630000 21630000 0 0 NaN 276 160 113 113 3135 3326 3556 3941 3556 3941 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13401 3556 3941 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13401 3556 3941 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13401 O60885 1117 O60885 O60885 Bromodomain-containing protein 4 BRD4 sp|O60885|BRD4_HUMAN Bromodomain-containing protein 4 OS=Homo sapiens GN=BRD4 PE=1 SV=2 1 100.756 0.00272612 100.76 52.473 100.76 1 S VQPQPLVVVKEEKIHSPIIRSEPFSPSLRPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX IHS(1)PIIR IHS(100.76)PIIR 3 2 -0.064925 26929 0 0 24411 0 0 26541 0 0 21642 0 0 26536 0 0 24995 0 0 26607 0 0 24332 0 0 25778 0 0 3239.6 0 0 25480 0 0 23045 0 0 26748 0 0 22444 0 0 26929 0 0 24902 0 0 27058 0 0 24530 0 0 25470 0 0 3613.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 137730000 137730000 0 0 NaN 277 161 1117 1117 1854 1958 2115 2372 2115 2372 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11308 2115 2372 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11308 2115 2372 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11308 O60885 469 O60885 O60885 Bromodomain-containing protein 4 BRD4 sp|O60885|BRD4_HUMAN Bromodomain-containing protein 4 OS=Homo sapiens GN=BRD4 PE=1 SV=2 0.573455 1.28534 4.91457E-05 112.23 99.671 112.23 1 S FAKMPDEPEEPVVAVSSPAVPPPTKVVAPPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPPXXXXXX MPDEPEEPVVAVS(0.573)S(0.427)PAVPPPTK MPDEPEEPVVAVS(1.29)S(-1.29)PAVPPPT(-61.34)K 13 3 0.59579 3593.4 0 0 4419.3 0 0 4480.1 0 0 3264.6 0 0 4418 0 0 3871.9 0 0 3367.8 0 0 4970.1 0 0 4835.7 0 0 16665 0 0 3403.6 0 0 4168.2 0 0 4457.5 0 0 3432.2 0 0 4473.6 0 0 3899 0 0 3518.8 0 0 5444.9 0 0 4709.1 0 0 15808 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10606000 10606000 0 0 NaN 278 161 469 469 2723 2888 3097 3444 3097 3444 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18325 3097 3444 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18325 3097 3444 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18325 O60934 432 O60934 O60934 Nibrin NBN sp|O60934|NBN_HUMAN Nibrin OS=Homo sapiens GN=NBN PE=1 SV=1 0.999725 35.6074 9.52116E-16 213.5 176.76 133.98 1 S VSNTLAKMRIPNYQLSPTKLPSINKSKDRAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPXXXXXX IPNYQLS(1)PTK IPNY(-110.12)QLS(35.61)PT(-35.61)K 7 3 0.11074 27558 0 0 39355 0 0 32065 0 0 37956 0 0 30765 0 0 32350 0 0 31416 0 0 34228 0 0 42859 0 0 21998 0 0 26094 0 0 37169 0 0 32014 0 0 38967 0 0 31317 0 0 32741 0 0 32261 0 0 34924 0 0 41804 0 0 21506 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 124080000 124080000 0 0 NaN 279 162 432 432 1911;1912 2019;2020 2180;2181 2440;2441 2180 2440 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16765 2181 2441 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20149 2181 2441 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20149 O60934 397 O60934 O60934 Nibrin NBN sp|O60934|NBN_HUMAN Nibrin OS=Homo sapiens GN=NBN PE=1 SV=1 0.999885 39.3975 0.00662356 89.231 64.849 89.231 1 S KEIKVSKMEQKFRMLSQDAPTVKESCKTSSN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX MLS(1)QDAPTVK MLS(39.4)QDAPT(-39.4)VK 3 2 0.74076 10448 0 0 9931.8 0 0 10181 0 0 10160 0 0 17138 0 0 10782 0 0 17050 0 0 12289 0 0 11533 0 0 11138 0 0 9885.1 0 0 9383.5 0 0 10352 0 0 10428 0 0 16975 0 0 10820 0 0 17208 0 0 12604 0 0 11613 0 0 10772 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8499400 8499400 0 0 NaN 280 162 397 397 2713 2879 3088 3435 3088 3435 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15466 3088 3435 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15466 3088 3435 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15466 O60934 341 O60934 O60934 Nibrin NBN sp|O60934|NBN_HUMAN Nibrin OS=Homo sapiens GN=NBN PE=1 SV=1 0.646957 4.48432 4.55054E-05 121.59 101.88 121.59 1 S QGHPSTGLKTTTPGPSLSQGVSVDEKLMPSA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPXXXXX T(0.061)T(0.061)T(0.23)PGPS(0.647)LS(0.001)QGVSVDEK T(-10.28)T(-10.28)T(-4.48)PGPS(4.48)LS(-26.88)QGVS(-38.96)VDEK 7 3 0.51516 11219 0 0 11027 0 0 11984 0 0 12861 0 0 13496 0 0 10507 0 0 14111 0 0 13005 0 0 13314 0 0 11295 0 0 10619 0 0 10427 0 0 12043 0 0 13056 0 0 13614 0 0 10689 0 0 14313 0 0 13288 0 0 13171 0 0 10937 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10213000 10213000 0 0 NaN 281 162 341 341 4993 5322 5670 6299 5670 6299 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14711 5670 6299 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14711 5670 6299 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14711 O60934 343 O60934 O60934 Nibrin NBN sp|O60934|NBN_HUMAN Nibrin OS=Homo sapiens GN=NBN PE=1 SV=1 0.993915 22.2257 5.21466E-05 119.07 99.235 119.07 1 S HPSTGLKTTTPGPSLSQGVSVDEKLMPSAPV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPXXXXXXX TTTPGPS(0.006)LS(0.994)QGVSVDEK T(-45.67)T(-45.67)T(-41.11)PGPS(-22.23)LS(22.23)QGVS(-67.76)VDEK 9 3 0.3389 6248.8 0 0 8744.2 0 0 7140.1 0 0 8200.9 0 0 14849 0 0 8923 0 0 14106 0 0 10400 0 0 8905.7 0 0 7911.7 0 0 5916.3 0 0 8257.2 0 0 7231.4 0 0 8465.2 0 0 14598 0 0 8945.2 0 0 14252 0 0 10614 0 0 9007.8 0 0 7690.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13155000 13155000 0 0 NaN 282 162 343 343 4993 5322 5671 6300 5671 6300 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15325 5671 6300 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15325 5671 6300 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15325 O75037 1215 O75037 O75037 Kinesin-like protein KIF21B KIF21B sp|O75037|KI21B_HUMAN Kinesin-like protein KIF21B OS=Homo sapiens GN=KIF21B PE=1 SV=2 0.970448 15.1639 1.68289E-07 175.34 131.7 175.34 1 S TRGSTFPRQSRATETSPLTRRKSYDRGQPIR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX ATET(0.03)S(0.97)PLTR AT(-63.33)ET(-15.16)S(15.16)PLT(-70.39)R 5 2 1.5419 26643 0 0 17480 0 0 23571 0 0 17392 0 0 24298 0 0 25806 0 0 24060 0 0 23112 0 0 20678 0 0 3169.9 0 0 25199 0 0 16512 0 0 23920 0 0 17998 0 0 24609 0 0 25463 0 0 24410 0 0 23383 0 0 20547 0 0 3519.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 34822000 34822000 0 0 NaN 283 163 1215 1215 525 558 598 665 598 665 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8589 598 665 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8589 598 665 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8589 O75037 1149 O75037 O75037 Kinesin-like protein KIF21B KIF21B sp|O75037|KI21B_HUMAN Kinesin-like protein KIF21B OS=Homo sapiens GN=KIF21B PE=1 SV=2 1 76.4671 0.00543446 86.748 64.527 86.748 1 S KFKSEPKLSAQMKAVSAECLGPPLDISTKNI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX AVS(1)AECLGPPLDISTK AVS(76.47)AECLGPPLDIS(-76.47)T(-76.55)K 3 3 2.9529 7604.5 0 0 6816.8 0 0 7765.3 0 0 8580.7 0 0 9176.6 0 0 7207.5 0 0 8735.9 0 0 8685.7 0 0 8181.3 0 0 12707 0 0 7196.4 0 0 6449.7 0 0 7826.5 0 0 8680.7 0 0 9222.3 0 0 7328.2 0 0 8898.3 0 0 9038 0 0 8096 0 0 12166 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15692000 15692000 0 0 NaN 284 163 1149 1149 563 600 641 716 641 716 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20228 641 716 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20228 641 716 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20228 P0DMP2;P0DJJ0;O75044 426;427;427 P0DMP2 P0DMP2 SLIT-ROBO Rho GTPase-activating protein 2B;SLIT-ROBO Rho GTPase-activating protein 2C;SLIT-ROBO Rho GTPase-activating protein 2 SRGAP2B;SRGAP2C;SRGAP2 sp|P0DMP2|SRG2B_HUMAN SLIT-ROBO Rho GTPase-activating protein 2B OS=Homo sapiens GN=SRGAP2B PE=3 SV=1;sp|P0DJJ0|SRG2C_HUMAN SLIT-ROBO Rho GTPase-activating protein 2C OS=Homo sapiens GN=SRGAP2C PE=1 SV=1;sp|O75044|SRGP2_HUMAN SLIT-ROBO Rho GTPase-activatin 0.973014 17.0949 0.000160826 102.33 85.045 102.33 1 S CFQYSNSMESVKSTVSETFMSKPSIAKRRAN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPXXXX S(0.004)T(0.019)VS(0.973)ET(0.004)FMSKPSIAK S(-24.24)T(-17.09)VS(17.09)ET(-23.53)FMS(-50.03)KPS(-70.51)IAK 4 3 -0.64214 22042 0 0 8833.6 0 0 20871 0 0 9096.7 0 0 15626 0 0 22526 0 0 15822 0 0 14735 0 0 9291.1 0 0 14847 0 0 20853 0 0 8346.3 0 0 21019 0 0 9539.9 0 0 16164 0 0 21910 0 0 15917 0 0 15530 0 0 9444.5 0 0 14321 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13442000 13442000 0 0 NaN 285 164 426 426 4542 4844 5161 5731 5161 5731 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18169 5161 5731 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18169 5161 5731 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18169 O75081 459 O75081 O75081 Protein CBFA2T3 CBFA2T3 sp|O75081|MTG16_HUMAN Protein CBFA2T3 OS=Homo sapiens GN=CBFA2T3 PE=1 SV=2 0.993878 25.1145 4.42903E-33 324.96 295.89 324.96 1 S TKKGPAPAAARPRSSSAGPEGPQLDVPREFL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX S(0.003)S(0.003)S(0.994)AGPEGPQLDVPR S(-25.11)S(-25.11)S(25.11)AGPEGPQLDVPR 3 2 -0.0050281 10350 0 0 17678 0 0 10564 0 0 17618 0 0 30646 0 0 9992 0 0 31152 0 0 22616 0 0 18354 0 0 25981 0 0 9794.7 0 0 16699 0 0 10872 0 0 17971 0 0 29909 0 0 10563 0 0 31335 0 0 22980 0 0 18653 0 0 24988 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 54116000 54116000 0 0 NaN 286 166 459 459 4414 4702 5006 5554 5006 5554 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13372 5006 5554 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13372 5006 5554 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13372 O75081 328 O75081 O75081 Protein CBFA2T3 CBFA2T3 sp|O75081|MTG16_HUMAN Protein CBFA2T3 OS=Homo sapiens GN=CBFA2T3 PE=1 SV=2 0.806665 6.20382 1.65493E-12 212.85 198.76 212.85 1 S HLSKRPCTLNPAQRYSPSNGPPQPTPPPHYR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP YS(0.807)PS(0.193)NGPPQPTPPPHYR Y(-73.5)S(6.2)PS(-6.2)NGPPQPT(-167.14)PPPHY(-203.29)R 2 3 -0.76291 17784 0 0 18597 0 0 17449 0 0 20525 0 0 24351 0 0 17866 0 0 26223 0 0 22982 0 0 21257 0 0 19515 0 0 16827 0 0 17579 0 0 17678 0 0 20914 0 0 24326 0 0 18127 0 0 26466 0 0 23443 0 0 21185 0 0 18907 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 60946000 60946000 0 0 NaN 287 166 328 328 5435 5788 6179 6877;6878 6179 6877 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10679 6179 6877 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10679 6179 6877 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10679 O75122 459 O75122 O75122 CLIP-associating protein 2 CLASP2 sp|O75122|CLAP2_HUMAN CLIP-associating protein 2 OS=Homo sapiens GN=CLASP2 PE=1 SV=2 0.999998 57.5293 0.000231628 119.62 85.821 119.62 1 S RGRSRTKMVSQSQPGSRSGSPGRVLTTTALS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPXXXXXXXXXXXXXX MVSQSQPGS(1)R MVS(-80.28)QS(-57.53)QPGS(57.53)R 9 2 -0.74788 17680 0 0 16993 0 0 15616 0 0 17639 0 0 11710 0 0 16784 0 0 12416 0 0 16290 0 0 16967 0 0 3792 0 0 16722 0 0 16057 0 0 15796 0 0 18058 0 0 12128 0 0 16863 0 0 12729 0 0 16473 0 0 16548 0 0 3947.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19957000 19957000 0 0 NaN 288 168 459 459 2762 2931 3141 3490 3141 3490 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7321 3141 3490 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7321 3141 3490 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7321 O75122 955 O75122 O75122 CLIP-associating protein 2 CLASP2 sp|O75122|CLAP2_HUMAN CLIP-associating protein 2 OS=Homo sapiens GN=CLASP2 PE=1 SV=2 1 52.1723 0.0324145 52.172 35.948 52.172 1 S SLRGVTEAIQNFSFRSQEDMNEPLKRDSKKD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPXXXXX S(1)QEDMNEPLKR S(52.17)QEDMNEPLKR 1 3 -0.28369 13879 0 0 21033 0 0 15103 0 0 21036 0 0 19890 0 0 13290 0 0 17589 0 0 18587 0 0 20847 0 0 3615.7 0 0 13138 0 0 19869 0 0 15192 0 0 21474 0 0 19873 0 0 13740 0 0 18104 0 0 18548 0 0 20432 0 0 3834.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18476000 18476000 0 0 NaN 289 168 955 955 4223 4501 4797 5323 4797 5323 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10512 4797 5323 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10512 4797 5323 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10512 O75122 368 O75122 O75122 CLIP-associating protein 2 CLASP2 sp|O75122|CLAP2_HUMAN CLIP-associating protein 2 OS=Homo sapiens GN=CLASP2 PE=1 SV=2 0.679505 3.26372 4.20145E-07 158.08 120.36 158.08 1 S AGSSKASSLPGSLQRSRSDIDVNAAAGAKAH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPXX S(0.68)RS(0.32)DIDVNAAAGAK S(3.26)RS(-3.26)DIDVNAAAGAK 1 3 -0.72697 59297 0 0 85078 0 0 61448 0 0 92911 0 0 48815 0 0 62581 0 0 59937 0 0 60324 0 0 96246 0 0 6722.9 0 0 56118 0 0 80415 0 0 61618 0 0 94433 0 0 50475 0 0 64067 0 0 61471 0 0 60799 0 0 93426 0 0 7726.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 125960000 125960000 0 0 NaN 290 168 368 368 4276 4556 4856 5388 4856 5388 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10676 4856 5388 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10676 4856 5388 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10676 O75122 326 O75122 O75122 CLIP-associating protein 2 CLASP2 sp|O75122|CLAP2_HUMAN CLIP-associating protein 2 OS=Homo sapiens GN=CLASP2 PE=1 SV=2 0.497975 0 1.36935E-10 180.41 154.82 180.41 S SGSVASLPQSDRSSSSSQESLNRPFSSKWST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPXXX SSS(0.004)S(0.498)S(0.498)QESLNRPFSSK S(-52.4)S(-52.4)S(-20.94)S(0)S(0)QES(-41.95)LNRPFS(-107.84)S(-113.87)K 4 3 0.15612 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 291 168 326 326 4467 4758 5064 5619 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11686 5064 5619 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11686 5064 5619 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11686 O75122 327 O75122 O75122 CLIP-associating protein 2 CLASP2 sp|O75122|CLAP2_HUMAN CLIP-associating protein 2 OS=Homo sapiens GN=CLASP2 PE=1 SV=2 0.497975 0 1.36935E-10 180.41 154.82 180.41 S GSVASLPQSDRSSSSSQESLNRPFSSKWSTA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SSS(0.004)S(0.498)S(0.498)QESLNRPFSSK S(-52.4)S(-52.4)S(-20.94)S(0)S(0)QES(-41.95)LNRPFS(-107.84)S(-113.87)K 5 3 0.15612 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 292 168 327 327 4467 4758 5064 5619 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11686 5064 5619 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11686 5064 5619 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11686 O75122 596 O75122 O75122 CLIP-associating protein 2 CLASP2 sp|O75122|CLAP2_HUMAN CLIP-associating protein 2 OS=Homo sapiens GN=CLASP2 PE=1 SV=2 0.890762 9.11389 7.96402E-09 175.33 139.44 175.33 1 S RLSSSVSAMRVLNTGSDVEEAVADALKKPAR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPXXXX VLNT(0.109)GS(0.891)DVEEAVADALK VLNT(-9.11)GS(9.11)DVEEAVADALK 6 3 -0.04094 6553.2 0 0 9909.1 0 0 5056.4 0 0 9477.8 0 0 7712.2 0 0 6734.9 0 0 8385.8 0 0 10068 0 0 9225.8 0 0 135500 0 0 6195.4 0 0 9358.3 0 0 5211.3 0 0 9713.8 0 0 7679.9 0 0 7170.1 0 0 8526.6 0 0 14053 0 0 9067.4 0 0 127820 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 57873000 57873000 0 0 NaN 293 168 596 596 5166 5505 5867 6521 5867 6521 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23811 5867 6521 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23811 5867 6521 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23811 O75132 624 O75132 O75132 Zinc finger BED domain-containing protein 4 ZBED4 sp|O75132|ZBED4_HUMAN Zinc finger BED domain-containing protein 4 OS=Homo sapiens GN=ZBED4 PE=1 SV=2 0.891816 9.19145 7.41964E-05 122.01 95.477 122.01 1 S SNVLKTEVSETARPSSPDTRVPRGTELSGAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPXXXXXXXXXXX TEVSETARPS(0.107)S(0.892)PDT(0.001)R T(-67.91)EVS(-54.36)ET(-40)ARPS(-9.19)S(9.19)PDT(-31.3)R 11 3 -0.54736 12458 0 0 10901 0 0 15049 0 0 9107 0 0 12749 0 0 12890 0 0 14180 0 0 12206 0 0 11207 0 0 2710.2 0 0 11798 0 0 10288 0 0 14979 0 0 9521.1 0 0 13091 0 0 12748 0 0 14284 0 0 12352 0 0 11184 0 0 2834.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22311000 22311000 0 0 NaN 294 169 624 624 4699 5010 5337 5932 5337 5932 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6702 5337 5932 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6702 5337 5932 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6702 O75151 539 O75151 O75151 Lysine-specific demethylase PHF2 PHF2 sp|O75151|PHF2_HUMAN Lysine-specific demethylase PHF2 OS=Homo sapiens GN=PHF2 PE=1 SV=4 0.957494 15.3275 1.35795E-22 251.09 198.03 251.09 1 S KDGGKKKGKKSRESASPTIPNLDLLEAHTKE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPX ES(0.014)AS(0.957)PT(0.028)IPNLDLLEAHTK ES(-18.22)AS(15.33)PT(-15.33)IPNLDLLEAHT(-203.54)K 4 3 -0.13306 10658 0 0 6156 0 0 9255.2 0 0 6438.2 0 0 5380.5 0 0 10217 0 0 5846.2 0 0 8068.2 0 0 7251 0 0 16426 0 0 10080 0 0 5817 0 0 9353.5 0 0 6654.1 0 0 5696.8 0 0 10077 0 0 5967 0 0 8671.2 0 0 7095 0 0 15654 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21949000 21949000 0 0 NaN 295 170 539 539 1144 1204 1296 1426 1296 1426 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20788 1296 1426 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20788 1296 1426 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20788 O75152 132 O75152 O75152 Zinc finger CCCH domain-containing protein 11A ZC3H11A sp|O75152|ZC11A_HUMAN Zinc finger CCCH domain-containing protein 11A OS=Homo sapiens GN=ZC3H11A PE=1 SV=3 0.99161 20.736 0.0204296 64.534 43.632 64.534 1 S QLSVQQNKLSVQSNPSPQLRSVMKVESSENV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX LSVQS(0.008)NPS(0.992)PQLR LS(-47.07)VQS(-20.74)NPS(20.74)PQLR 8 2 1.2142 12165 0 0 17331 0 0 14268 0 0 15256 0 0 14109 0 0 13493 0 0 15700 0 0 16002 0 0 18977 0 0 14109 0 0 11519 0 0 16360 0 0 14247 0 0 15762 0 0 14353 0 0 13661 0 0 15995 0 0 16379 0 0 18585 0 0 13656 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18157000 18157000 0 0 NaN 296 171 132 132 2610 2757 2957 3294 2957 3294 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13176 2957 3294 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13176 2957 3294 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13176 O75152 758 O75152 O75152 Zinc finger CCCH domain-containing protein 11A ZC3H11A sp|O75152|ZC11A_HUMAN Zinc finger CCCH domain-containing protein 11A OS=Homo sapiens GN=ZC3H11A PE=1 SV=3 0.709909 3.89953 2.41731E-16 229.7 178.81 229.7 1 S SGPSSSQMSMKTRRLSSASTGKPPLSVEDDF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RLS(0.71)S(0.289)AS(0.001)TGKPPLSVEDDFEK RLS(3.9)S(-3.9)AS(-29.22)T(-50.16)GKPPLS(-103.02)VEDDFEK 3 4 0.84384 15959 0 0 16171 0 0 17078 0 0 15423 0 0 18586 0 0 17268 0 0 23011 0 0 18694 0 0 18374 0 0 7163.8 0 0 15105 0 0 15272 0 0 17159 0 0 15911 0 0 18830 0 0 17258 0 0 23084 0 0 18912 0 0 18326 0 0 7178.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 107510000 107510000 0 0 NaN 297 171 758 758 3344 3546 3783 4201 3783 4201 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17101 3783 4201 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17101 3783 4201 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17101 O75167 237 O75167 O75167 Phosphatase and actin regulator 2 PHACTR2 sp|O75167|PHAR2_HUMAN Phosphatase and actin regulator 2 OS=Homo sapiens GN=PHACTR2 PE=1 SV=2 0.883269 10.5925 1.06623E-07 171.04 154.31 171.04 1 S GSSHSKKTTGSKASASPSTSSTSSRPKASKE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPXXXX AS(0.077)AS(0.883)PS(0.038)T(0.001)SSTSSRPK AS(-10.59)AS(10.59)PS(-13.62)T(-28.46)S(-50.02)S(-62.07)T(-81.12)S(-93.24)S(-104.15)RPK 4 3 -0.049398 7056.8 0 0 6491.7 0 0 7573.2 0 0 7029.6 0 0 13395 0 0 6228.9 0 0 16753 0 0 11183 0 0 6477.2 0 0 1775.4 0 0 6679.5 0 0 6135.6 0 0 7673.7 0 0 7172.1 0 0 13287 0 0 6344.7 0 0 16611 0 0 11079 0 0 6826.9 0 0 1930.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19675000 19675000 0 0 NaN 298 172 237 237 436 465 500 560 500 560 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6065 500 560 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6065 500 560 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6065 O75167 522 O75167 O75167 Phosphatase and actin regulator 2 PHACTR2 sp|O75167|PHAR2_HUMAN Phosphatase and actin regulator 2 OS=Homo sapiens GN=PHACTR2 PE=1 SV=2 0.999956 45.8998 8.42995E-05 128.38 72.793 128.38 1 S QEIRQQIGTKLVRRLSQRPTTEELEQRNILK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX RLS(1)QRPTTEELEQR RLS(45.9)QRPT(-47.41)T(-45.9)EELEQR 3 3 -1.6779 38799 0 0 25324 0 0 35973 0 0 21731 0 0 41279 0 0 40233 0 0 50636 0 0 32142 0 0 24120 0 0 7540.7 0 0 36703 0 0 23902 0 0 36468 0 0 22830 0 0 41684 0 0 39414 0 0 50368 0 0 32781 0 0 24924 0 0 7844.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 92287000 92287000 0 0 NaN 299 172 522 522 3342 3544 3781 4199 3781 4199 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9255 3781 4199 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9255 3781 4199 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9255 O75170 771 O75170 O75170 Serine/threonine-protein phosphatase 6 regulatory subunit 2 PPP6R2 sp|O75170|PP6R2_HUMAN Serine/threonine-protein phosphatase 6 regulatory subunit 2 OS=Homo sapiens GN=PPP6R2 PE=1 SV=2 0.969451 15.0154 2.88641E-31 290.92 278.37 290.92 1 S DFQPFCCSESGPRCSSPVDTECSHAEGSRSQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX CS(0.031)S(0.969)PVDTECSHAEGSR CS(-15.02)S(15.02)PVDT(-60.97)ECS(-158.19)HAEGS(-245.58)R 3 3 -0.33891 4451.7 0 0 4577.3 0 0 4789.9 0 0 3929.9 0 0 4589.1 0 0 4387.1 0 0 5196.8 0 0 6218.6 0 0 4982.5 0 0 1747.7 0 0 4213.7 0 0 4320.4 0 0 4802.4 0 0 4082 0 0 4677.3 0 0 4403.3 0 0 5254.9 0 0 6219.4 0 0 4925.3 0 0 1789.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10186000 10186000 0 0 NaN 300 173 771 771 622 663 707 783 707 783 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6092 707 783 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6092 707 783 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6092 O75175 299 O75175 O75175 CCR4-NOT transcription complex subunit 3 CNOT3 sp|O75175|CNOT3_HUMAN CCR4-NOT transcription complex subunit 3 OS=Homo sapiens GN=CNOT3 PE=1 SV=1 0.999947 42.778 2.13831E-07 156.17 142.51 156.17 1 S DDKKRGRSTDSEVSQSPAKNGSKPVHSNQHP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPXXXXXXXXXXXX STDSEVSQS(1)PAK S(-99.57)T(-99.57)DS(-83.15)EVS(-42.78)QS(42.78)PAK 9 3 0.55672 23448 0 0 28193 0 0 27698 0 0 31364 0 0 15662 0 0 23075 0 0 17459 0 0 25433 0 0 34443 0 0 4133.6 0 0 22204 0 0 26651 0 0 27502 0 0 31877 0 0 16646 0 0 23537 0 0 18151 0 0 25545 0 0 33264 0 0 4480.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 87865000 87865000 0 0 NaN 301 174 299 299 4497 4789 5101 5665 5101 5665 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7829 5101 5665 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7829 5101 5665 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7829 O75179 2401 O75179 O75179 Ankyrin repeat domain-containing protein 17 ANKRD17 sp|O75179|ANR17_HUMAN Ankyrin repeat domain-containing protein 17 OS=Homo sapiens GN=ANKRD17 PE=1 SV=3 0.99511 23.3517 2.41373E-12 187.55 142.33 187.55 1 S NDSSAQSVSSGVRAPSPAPSSVPLGSEKPSN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP APS(0.995)PAPS(0.005)SVPLGSEKPSNVSQDR APS(23.35)PAPS(-23.35)S(-35.34)VPLGS(-78.4)EKPS(-102.64)NVS(-110.65)QDR 3 3 0.69471 16620 0 0 26691 0 0 15571 0 0 28780 0 0 8404.8 0 0 17090 0 0 11257 0 0 17663 0 0 30884 0 0 6203 0 0 15722 0 0 25226 0 0 15657 0 0 29235 0 0 9011.2 0 0 17671 0 0 11860 0 0 17882 0 0 29641 0 0 6249.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 59786000 59786000 0 0 NaN 302 175 2401 2401 369 395 429 477 429 477 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12911 429 477 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12911 429 477 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12911 O75179 19 O75179 O75179 Ankyrin repeat domain-containing protein 17 ANKRD17 sp|O75179|ANR17_HUMAN Ankyrin repeat domain-containing protein 17 OS=Homo sapiens GN=ANKRD17 PE=1 SV=3 0.999568 33.646 2.79391E-09 163.87 155.54 163.87 1 S ATVPVAAATAAEGEGSPPAVAAVAGPPAAAE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP ATVPVAAATAAEGEGS(1)PPAVAAVAGPPAAAEVGGGVGGSSR AT(-74.11)VPVAAAT(-33.65)AAEGEGS(33.65)PPAVAAVAGPPAAAEVGGGVGGS(-123.93)S(-123.17)R 16 4 -0.53797 5171.2 0 0 6081.2 0 0 5067.4 0 0 7094.6 0 0 4987.6 0 0 5878.1 0 0 5707.4 0 0 5870.3 0 0 5964 0 0 29663 0 0 4892.9 0 0 5750.5 0 0 5108.9 0 0 7203.1 0 0 5076.5 0 0 6002 0 0 5782.1 0 0 6782.4 0 0 5873.8 0 0 28067 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 28389000 28389000 0 0 NaN 303 175 19 19 545 579 620 692;693 620 692 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19137 620 692 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19137 620 692 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19137 O75179 1709 O75179 O75179 Ankyrin repeat domain-containing protein 17 ANKRD17 sp|O75179|ANR17_HUMAN Ankyrin repeat domain-containing protein 17 OS=Homo sapiens GN=ANKRD17 PE=1 SV=3 0.999098 30.4432 0.0017413 111.61 59.743 111.61 1 S GPSPLSSPNGKLTVASPKRGQKREEGWKEVV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX LT(0.001)VAS(0.999)PK LT(-30.44)VAS(30.44)PK 5 2 0.13721 117850 0 0 118190 0 0 121230 0 0 119290 0 0 35995 0 0 112120 0 0 46181 0 0 93021 0 0 124670 0 0 9048.9 0 0 111530 0 0 111660 0 0 120850 0 0 122300 0 0 41779 0 0 112480 0 0 48669 0 0 94320 0 0 119690 0 0 10674 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 129630000 129630000 0 0 NaN 304 175 1709 1709 2640 2787 2988 3325 2988 3325 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13371 2988 3325 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13371 2988 3325 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13371 O75179 1567 O75179 O75179 Ankyrin repeat domain-containing protein 17 ANKRD17 sp|O75179|ANR17_HUMAN Ankyrin repeat domain-containing protein 17 OS=Homo sapiens GN=ANKRD17 PE=1 SV=3 0.899835 9.87594 1.77052E-09 183.06 129.94 183.06 1 S AGSHGKRNNTITTTSSKRKNRKNKITPENVQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPXXXXXXXXXXXXXX NNTITTT(0.008)S(0.093)S(0.9)K NNT(-95.4)IT(-56.95)T(-48.05)T(-20.76)S(-9.88)S(9.88)K 9 2 0.55803 12218 0 0 13587 0 0 13491 0 0 13189 0 0 12693 0 0 12540 0 0 12157 0 0 14257 0 0 14987 0 0 5505.7 0 0 11566 0 0 12833 0 0 13501 0 0 13556 0 0 12924 0 0 12631 0 0 12478 0 0 14400 0 0 14667 0 0 5514.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8284700 8284700 0 0 NaN 305 175 1567 1567 2880 3053 3270 3626 3270 3626 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8764 3270 3626 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8764 3270 3626 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8764 O75179 2067 O75179 O75179 Ankyrin repeat domain-containing protein 17 ANKRD17 sp|O75179|ANR17_HUMAN Ankyrin repeat domain-containing protein 17 OS=Homo sapiens GN=ANKRD17 PE=1 SV=3 0.99992 40.9912 0.000191631 116.96 101.99 116.96 1 S PGGVSRNSPLDCGSASPNKVASSSEQEAGSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX NSPLDCGSAS(1)PNK NS(-96.01)PLDCGS(-40.99)AS(40.99)PNK 10 3 -1.1692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 306 175 2067 2067 2926 3102 3322 3682 3322 3682 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10977 3322 3682 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10977 3322 3682 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10977 O75362 407 O75362 O75362 Zinc finger protein 217 ZNF217 sp|O75362|ZN217_HUMAN Zinc finger protein 217 OS=Homo sapiens GN=ZNF217 PE=1 SV=1 0.999889 39.5467 1.63752E-22 254.01 226.58 254.01 1 S LHSRVHKKDRRAGAESPTMSVDGRQPGTCSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPXXXXXXX AGAES(1)PTMSVDGR AGAES(39.55)PT(-39.55)MS(-80.44)VDGR 5 2 -2.3785 39806 0 0 35285 0 0 39421 0 0 31888 0 0 29216 0 0 42530 0 0 28623 0 0 39603 0 0 37124 0 0 101880 0 0 37665 0 0 33313 0 0 39591 0 0 33120 0 0 30250 0 0 42310 0 0 29397 0 0 42908 0 0 36270 0 0 96846 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28027000 28027000 0 0 NaN 307 177 407 407 184 192 207 232 207 232 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9666 207 232 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9666 207 232 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9666 O75367 173 O75367 O75367 Core histone macro-H2A.1 H2AFY sp|O75367|H2AY_HUMAN Core histone macro-H2A.1 OS=Homo sapiens GN=H2AFY PE=1 SV=4 0.730056 7.69168 4.41582E-12 198.56 177.62 198.56 1 S SKKKQGEVSKAASADSTTEGTPADGFTVLST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP AAS(0.124)ADS(0.73)T(0.124)T(0.022)EGTPADGFTVLSTK AAS(-7.69)ADS(7.69)T(-7.69)T(-15.31)EGT(-80.02)PADGFT(-179.01)VLS(-191.36)T(-193.61)K 6 3 0.30293 5219 0 0 4380.5 0 0 5250.8 0 0 4832.6 0 0 6549.5 0 0 6074.4 0 0 8117 0 0 6089.4 0 0 5465.9 0 0 14991 0 0 4938.6 0 0 4140.7 0 0 5304.3 0 0 4954.3 0 0 6589.4 0 0 6061.7 0 0 8114.5 0 0 6559.2 0 0 5505.7 0 0 14256 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7417300 7417300 0 0 NaN 308 178 173 173 60 64 69 81 69 81 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19382 69 81 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19382 69 81 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19382 O75367 138 O75367 O75367 Core histone macro-H2A.1 H2AFY sp|O75367|H2AY_HUMAN Core histone macro-H2A.1 OS=Homo sapiens GN=H2AFY PE=1 SV=4 0.962385 14.0799 0.00121414 106.62 65.455 106.62 1 S KLEAIITPPPAKKAKSPSQKKPVSKKAGGKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX AKS(0.962)PS(0.038)QK AKS(14.08)PS(-14.08)QK 3 3 -1.9485 95770 0 0 54530 0 0 97328 0 0 50799 0 0 49537 0 0 101290 0 0 54355 0 0 69753 0 0 56722 0 0 3122.4 0 0 90628 0 0 51491 0 0 97338 0 0 53198 0 0 53162 0 0 98884 0 0 55162 0 0 71283 0 0 55867 0 0 4554.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 64787000 64787000 0 0 NaN 309 178 138 138 276 297 318 355 318 355 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6724 318 355 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6724 318 355 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6724 O75376 1472 O75376 O75376 Nuclear receptor corepressor 1 NCOR1 sp|O75376|NCOR1_HUMAN Nuclear receptor corepressor 1 OS=Homo sapiens GN=NCOR1 PE=1 SV=2 0.999674 35.121 0.000120287 124.48 104.82 124.48 1 S SVLRSTLHEAPKAQLSPGIYDDTSARRTPVS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX AQLS(1)PGIYDDTSAR AQLS(35.12)PGIY(-49.73)DDT(-35.12)S(-50.98)AR 4 2 0.29665 27333 0 0 22779 0 0 29882 0 0 24779 0 0 37701 0 0 29064 0 0 39855 0 0 34306 0 0 27366 0 0 28878 0 0 25873 0 0 21529 0 0 30042 0 0 25389 0 0 37816 0 0 29061 0 0 40123 0 0 35078 0 0 27532 0 0 27986 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 41793000 41793000 0 0 NaN 310 180 1472 1472 396 423 458 507;508 458 508 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14600 458 508 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14600 458 508 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14600 O75376 2136 O75376 O75376 Nuclear receptor corepressor 1 NCOR1 sp|O75376|NCOR1_HUMAN Nuclear receptor corepressor 1 OS=Homo sapiens GN=NCOR1 PE=1 SV=2 0.993736 22.0042 0.0373524 55.196 35.429 55.196 1 S PENLVDKSRGSRPGKSPERSHVSSEPYEPIS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX GS(0.006)RPGKS(0.994)PER GS(-22)RPGKS(22)PER 7 3 -0.93344 18105 0 0 14443 0 0 19915 0 0 16469 0 0 18464 0 0 18696 0 0 17945 0 0 17708 0 0 15394 0 0 1724.7 0 0 17138 0 0 13655 0 0 19931 0 0 16822 0 0 18813 0 0 18631 0 0 18222 0 0 17852 0 0 15298 0 0 2033.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 47090000 47090000 0 0 NaN 311 180 2136 2136 1632 1719 1858 2071 1858 2071 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5201 1858 2071 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5201 1858 2071 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5201 O75376 2184 O75376 O75376 Nuclear receptor corepressor 1 NCOR1 sp|O75376|NCOR1_HUMAN Nuclear receptor corepressor 1 OS=Homo sapiens GN=NCOR1 PE=1 SV=2 0.998478 28.181 9.56468E-12 209.29 185.61 209.29 1 S SQRGAEPAEQRNDARSPGSISYLPSFFTKLE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPXX NDARS(0.998)PGS(0.002)ISYLPSFFTK NDARS(28.18)PGS(-28.18)IS(-54.23)Y(-112.73)LPS(-112.17)FFT(-160.52)K 5 3 0.52239 112030 0 0 121800 0 0 123620 0 0 112690 0 0 59421 0 0 123590 0 0 67592 0 0 113800 0 0 123680 0 0 123130 0 0 106060 0 0 115010 0 0 123040 0 0 116440 0 0 64260 0 0 123510 0 0 69947 0 0 118240 0 0 119650 0 0 118580 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 276370000 276370000 0 0 NaN 312 180 2184 2184 2788;4112 2957;4384 3167;4674 3518;5189 3167 3518 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23058 3167 3518 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23058 3167 3518 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23058 O75376 999 O75376 O75376 Nuclear receptor corepressor 1 NCOR1 sp|O75376|NCOR1_HUMAN Nuclear receptor corepressor 1 OS=Homo sapiens GN=NCOR1 PE=1 SV=2 0.999999 58.823 0.0132763 73.805 56.867 73.805 1 S DLECRSSTSPCGTSKSPNREWEVLQPAPHQV X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(1)PNREWEVLQPAPHQVITNLPEGVR S(58.82)PNREWEVLQPAPHQVIT(-58.82)NLPEGVR 1 4 -0.081454 6757.9 0 0 7681.4 0 0 7470 0 0 9021.1 0 0 5303.2 0 0 7396.2 0 0 5891.5 0 0 6838.1 0 0 9218.8 0 0 13159 0 0 6397.3 0 0 7264 0 0 7455.5 0 0 9154.7 0 0 5521.1 0 0 7503.9 0 0 6059.9 0 0 7277.3 0 0 8955.1 0 0 12549 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9396600 9396600 0 0 NaN 313 180 999 999 4133 4406 4697 5213 4697 5213 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19047 4697 5213 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19047 4697 5213 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19047 O75376 992 O75376 O75376 Nuclear receptor corepressor 1 NCOR1 sp|O75376|NCOR1_HUMAN Nuclear receptor corepressor 1 OS=Homo sapiens GN=NCOR1 PE=1 SV=2 0.932324 11.4157 0.000178599 124.06 86.556 124.06 1 S RQRQEQIDLECRSSTSPCGTSKSPNREWEVL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX SST(0.067)S(0.932)PCGTSK S(-36.42)S(-38.09)T(-11.42)S(11.42)PCGT(-47.99)S(-51.78)K 4 2 1.3577 15755 0 0 11786 0 0 14458 0 0 12982 0 0 15315 0 0 15471 0 0 17193 0 0 15713 0 0 11771 0 0 7011.6 0 0 14904 0 0 11141 0 0 14647 0 0 13297 0 0 15513 0 0 15412 0 0 17262 0 0 15963 0 0 11845 0 0 6965.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8838400 8838400 0 0 NaN 314 180 992 992 4485 4777 5087 5646 5087 5646 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6699 5087 5646 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6699 5087 5646 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6699 O75376 2120 O75376 O75376 Nuclear receptor corepressor 1 NCOR1 sp|O75376|NCOR1_HUMAN Nuclear receptor corepressor 1 OS=Homo sapiens GN=NCOR1 PE=1 SV=2 1 182.492 4.65001E-09 182.49 99.063 182.49 1 S SQAQSVHHQRPGSRVSPENLVDKSRGSRPGK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPXXXXXXXX VS(1)PENLVDK VS(182.49)PENLVDK 2 2 -0.26102 55729 0 0 48451 0 0 55419 0 0 46206 0 0 51148 0 0 53502 0 0 49490 0 0 50389 0 0 50364 0 0 15385 0 0 52733 0 0 45757 0 0 55766 0 0 47697 0 0 52135 0 0 53292 0 0 50480 0 0 51128 0 0 49657 0 0 15653 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 83862000 83862000 0 0 NaN 315 180 2120 2120 5261 5607 5977 6641 5977 6641 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16961 5977 6641 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16961 5977 6641 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16961 O75376 1977 O75376 O75376 Nuclear receptor corepressor 1 NCOR1 sp|O75376|NCOR1_HUMAN Nuclear receptor corepressor 1 OS=Homo sapiens GN=NCOR1 PE=1 SV=2 0.999894 42.9299 3.23634E-05 122.5 97.705 122.5 1 S SSHRYETPSDAIEVISPASSPAPPQEKLQTY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPPPPPXXXX YETPSDAIEVIS(1)PASSPAPPQEK Y(-70.85)ET(-51.41)PS(-50.52)DAIEVIS(42.93)PAS(-44.08)S(-42.93)PAPPQEK 12 3 3.206 6685.8 0 0 4100.3 0 0 6460.4 0 0 4821.5 0 0 5008.4 0 0 6734.5 0 0 5897.8 0 0 6487.4 0 0 6160.1 0 0 33026 0 0 6325.7 0 0 3877.5 0 0 6502.1 0 0 4937.3 0 0 5181.1 0 0 6724 0 0 5968 0 0 7512 0 0 6067.1 0 0 31248 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9799200 9799200 0 0 NaN 316 180 1977 1977 5369 5719 6098 6777 6098 6777 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18156 6098 6777 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18156 6098 6777 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18156 O75385 623 O75385 O75385 Serine/threonine-protein kinase ULK1 ULK1 sp|O75385|ULK1_HUMAN Serine/threonine-protein kinase ULK1 OS=Homo sapiens GN=ULK1 PE=1 SV=2 0.991632 20.7374 3.48389E-05 130.21 105.42 130.21 1 S LPDFLQRNPLPPILGSPTKAVPSFDFPKTPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY) XXXXXXXPPPPPPPPPPPPXXXXXXXXXXXX NPLPPILGS(0.992)PT(0.008)K NPLPPILGS(20.74)PT(-20.74)K 9 3 -0.13764 5348.9 0 0 3592.4 0 0 5671.9 0 0 4662.9 0 0 3351.9 0 0 4685.8 0 0 3798 0 0 4507.1 0 0 4872.2 0 0 5203 0 0 5062.6 0 0 3399.7 0 0 5665.2 0 0 4722.7 0 0 3545.8 0 0 4703.3 0 0 3874 0 0 4684.6 0 0 4761.8 0 0 5003.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18846000 18846000 0 0 NaN 317 181 623 623 2884 3057 3274 3630 3274 3630 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20591 3274 3630 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20591 3274 3630 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20591 O75385 638 O75385 O75385 Serine/threonine-protein kinase ULK1 ULK1 sp|O75385|ULK1_HUMAN Serine/threonine-protein kinase ULK1 OS=Homo sapiens GN=ULK1 PE=1 SV=2 0.726808 4.54572 0.000111351 124.2 91.075 124.2 1 S SPTKAVPSFDFPKTPSSQNLLALLARQGVVM Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX T(0.255)PS(0.727)S(0.018)QNLLALLAR T(-4.55)PS(4.55)S(-16.06)QNLLALLAR 3 2 0.49725 33222 0 0 25629 0 0 29115 0 0 21238 0 0 24847 0 0 27905 0 0 25723 0 0 27197 0 0 20593 0 0 52212 0 0 31421 0 0 24186 0 0 29502 0 0 22182 0 0 25475 0 0 27763 0 0 26001 0 0 28882 0 0 20537 0 0 49793 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 86950000 86950000 0 0 NaN 318 181 638 638 4860 5185 5524 6142 5524 6142 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23725 5524 6142 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23725 5524 6142 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23725 O75396 137 O75396 O75396 Vesicle-trafficking protein SEC22b SEC22B sp|O75396|SC22B_HUMAN Vesicle-trafficking protein SEC22b OS=Homo sapiens GN=SEC22B PE=1 SV=4 0.999585 33.8228 1.98875E-10 177.07 164.87 177.07 1 S TKKLYIDSCARRNLGSINTELQDVQRIMVAN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX NLGS(1)INTELQDVQR NLGS(33.82)INT(-33.82)ELQDVQR 4 3 -0.17247 4893.8 0 0 2035.2 0 0 4693.1 0 0 4501.4 0 0 5105.6 0 0 5129 0 0 5396.8 0 0 5304.1 0 0 4743.4 0 0 4346.2 0 0 4630.1 0 0 1936.6 0 0 4742.8 0 0 4481.4 0 0 5160.3 0 0 5123.4 0 0 5461.6 0 0 5444.6 0 0 4708 0 0 4215.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 73624000 73624000 0 0 NaN 319 183 137 137 2848 3018 3232 3587 3232 3587 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18291 3232 3587 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18291 3232 3587 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18291 O75400 34 O75400 O75400 Pre-mRNA-processing factor 40 homolog A PRPF40A sp|O75400|PR40A_HUMAN Pre-mRNA-processing factor 40 homolog A OS=Homo sapiens GN=PRPF40A PE=1 SV=2 0.996916 25.2065 3.14798E-11 192.23 171.78 192.23 1 S SHPPSQGPGDGERRLSGSSLCSGSWVSADGF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RLS(0.997)GS(0.003)SLCSGSWVSADGFLR RLS(25.21)GS(-25.21)S(-41.09)LCS(-93.96)GS(-116.9)WVS(-157.07)ADGFLR 3 3 -0.47294 4997.4 0 0 6258.7 0 0 5555.5 0 0 6582.3 0 0 7129.7 0 0 6013.9 0 0 9186.8 0 0 6911.2 0 0 5517.5 0 0 17626 0 0 4730.9 0 0 5914.2 0 0 5585.1 0 0 6729.7 0 0 7168 0 0 6097.8 0 0 9152.1 0 0 7428.7 0 0 5599.8 0 0 16757 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 48929000 48929000 0 0 NaN 320 184 34 34 3326 3528 3765 4181 3765 4181 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21513 3765 4181 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21513 3765 4181 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21513 O75420 638 O75420 O75420 PERQ amino acid-rich with GYF domain-containing protein 1 GIGYF1 sp|O75420|PERQ1_HUMAN PERQ amino acid-rich with GYF domain-containing protein 1 OS=Homo sapiens GN=GIGYF1 PE=1 SV=2 0.702702 3.73625 0.000109772 133.12 107.1 133.12 1 S RGGDQNLLPTMSRSLSVPDSGRLWDVHTSAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX S(0.297)LS(0.703)VPDSGR S(-3.74)LS(3.74)VPDS(-43.52)GR 3 2 -2.5556 34216 0 0 36746 0 0 35364 0 0 37820 0 0 30205 0 0 34324 0 0 32736 0 0 33907 0 0 37882 0 0 5409.1 0 0 32382 0 0 34719 0 0 35485 0 0 38711 0 0 30997 0 0 34565 0 0 33342 0 0 34190 0 0 37160 0 0 5878 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 87231000 87231000 0 0 NaN 321 185 638 638 4007 4272 4560 5068 4560 5068 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11255 4560 5068 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11255 4560 5068 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11255 O75427 25 O75427 O75427 Leucine-rich repeat and calponin homology domain-containing protein 4 LRCH4 sp|O75427|LRCH4_HUMAN Leucine-rich repeat and calponin homology domain-containing protein 4 OS=Homo sapiens GN=LRCH4 PE=1 SV=2 0.995477 24.077 4.49898E-18 195.86 184.26 195.86 1 S AAGGEEAAATTSVPGSPGLPGRRSAERALEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPXXXXXXXX AAAVAAPLAAGGEEAAATTS(0.004)VPGS(0.995)PGLPGRR AAAVAAPLAAGGEEAAAT(-35.83)T(-34.3)S(-24.08)VPGS(24.08)PGLPGRR 24 3 0.34045 7571.5 0 0 6971.3 0 0 6617.9 0 0 6970.7 0 0 6974.1 0 0 5220 0 0 6994.1 0 0 9005.6 0 0 5636.3 0 0 62088 0 0 7161 0 0 6585.5 0 0 6723.1 0 0 7129.2 0 0 7055.3 0 0 5474.8 0 0 7081.3 0 0 10757 0 0 5618.9 0 0 58672 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 159420000 159420000 0 0 NaN 322 186 25 25 14;15 15;16 18;19 25;26 19 26 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18987 19 26 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18987 19 26 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18987 O75427 281 O75427 O75427 Leucine-rich repeat and calponin homology domain-containing protein 4 LRCH4 sp|O75427|LRCH4_HUMAN Leucine-rich repeat and calponin homology domain-containing protein 4 OS=Homo sapiens GN=LRCH4 PE=1 SV=2 0.860344 9.19888 2.08539E-07 148.36 128.72 148.36 1 S GSALGDLAPSRPPSFSPCPAEDLFPGHRYDG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPXXX GSALGDLAPS(0.036)RPPS(0.103)FS(0.86)PCPAEDLFPGHR GS(-75.09)ALGDLAPS(-13.76)RPPS(-9.2)FS(9.2)PCPAEDLFPGHR 16 4 -0.95369 6261.5 0 0 8757.1 0 0 7134.3 0 0 8389.8 0 0 8137.5 0 0 7481.8 0 0 9048.7 0 0 8175.9 0 0 8949 0 0 22791 0 0 5928.3 0 0 8270.5 0 0 7147.6 0 0 8622.2 0 0 8211.5 0 0 7591.6 0 0 9164.3 0 0 8860.8 0 0 8834.2 0 0 21650 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 13993000 13993000 0 0 NaN 323 186 281 281 1595 1681 1817 2018;2019 1817 2019 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21009 1817 2019 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21009 1817 2019 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21009 O75427 506 O75427 O75427 Leucine-rich repeat and calponin homology domain-containing protein 4 LRCH4 sp|O75427|LRCH4_HUMAN Leucine-rich repeat and calponin homology domain-containing protein 4 OS=Homo sapiens GN=LRCH4 PE=1 SV=2 0.997749 26.4671 0.00925249 75.608 56.785 75.608 1 S TAPAPRPLGSIQRPNSFLFRSSSQSGSGPSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY) XXXXXXPPPPPPPPPPPPPPXXXXXXXXXXX PLGS(0.002)IQRPNS(0.998)FLFR PLGS(-26.47)IQRPNS(26.47)FLFR 10 3 -0.48834 20397 0 0 18480 0 0 21089 0 0 17669 0 0 23895 0 0 21098 0 0 30088 0 0 24252 0 0 19171 0 0 27736 0 0 19304 0 0 17453 0 0 21242 0 0 18247 0 0 24161 0 0 21087 0 0 30031 0 0 25040 0 0 19379 0 0 26678 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 17422000 17422000 0 0 NaN 324 186 506 506 2980 3159 3382 3750;3751;3752 3382 3751 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20932 3382 3751 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20932 3382 3751 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20932 O75427 521 O75427 O75427 Leucine-rich repeat and calponin homology domain-containing protein 4 LRCH4 sp|O75427|LRCH4_HUMAN Leucine-rich repeat and calponin homology domain-containing protein 4 OS=Homo sapiens GN=LRCH4 PE=1 SV=2 0.965247 14.4405 5.11002E-11 184.95 170.79 184.95 1 S SFLFRSSSQSGSGPSSPDSVLRPRRYPQVPD Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPXXXXXXX SSSQSGSGPS(0.035)S(0.965)PDSVLRPR S(-91.22)S(-91.22)S(-79.72)QS(-53.62)GS(-45.66)GPS(-14.44)S(14.44)PDS(-55.88)VLRPR 11 3 -0.82099 11370 0 0 12561 0 0 12850 0 0 13540 0 0 18537 0 0 12844 0 0 19396 0 0 15661 0 0 14343 0 0 5850.4 0 0 10765 0 0 11871 0 0 12925 0 0 13832 0 0 18483 0 0 12952 0 0 19564 0 0 15776 0 0 14367 0 0 5871.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 35996000 35996000 0 0 NaN 325 186 521 521 4462 4753 5058 5613 5058 5613 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10620 5058 5613 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10620 5058 5613 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10620 O75448 862 O75448 O75448 Mediator of RNA polymerase II transcription subunit 24 MED24 sp|O75448|MED24_HUMAN Mediator of RNA polymerase II transcription subunit 24 OS=Homo sapiens GN=MED24 PE=1 SV=1 0.838299 7.14685 3.27251E-11 199.6 171.4 199.6 1 S FPLDDVQPSKLMRLLSSNEDDANILSSPTDR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP LLS(0.838)S(0.162)NEDDANILSSPTDR LLS(7.15)S(-7.15)NEDDANILS(-170.84)S(-176.61)PT(-184.66)DR 3 3 -0.91763 5574.9 0 0 4536.9 0 0 5549.7 0 0 3660.9 0 0 6394.1 0 0 6073.3 0 0 6649.5 0 0 5539.8 0 0 5195.9 0 0 12298 0 0 5275.1 0 0 4280.8 0 0 5600.5 0 0 3851.1 0 0 6441.1 0 0 5996.4 0 0 6716.6 0 0 5948 0 0 5188.5 0 0 11708 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15296000 15296000 0 0 NaN 326 187 862 862 2462 2600 2794 3121 2794 3121 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19190 2794 3121 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19190 2794 3121 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19190 O75475 106 O75475 O75475 PC4 and SFRS1-interacting protein PSIP1 sp|O75475|PSIP1_HUMAN PC4 and SFRS1-interacting protein OS=Homo sapiens GN=PSIP1 PE=1 SV=1 0.602802 1.81173 1.29716E-10 193.32 138.98 193.32 1 S KFSSQQAATKQSNASSDVEVEEKETSVSKED X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPXXXXXXXX QSNAS(0.397)S(0.603)DVEVEEK QS(-50.58)NAS(-1.81)S(1.81)DVEVEEK 6 2 -1.3373 19650 0 0 17172 0 0 19224 0 0 19849 0 0 27060 0 0 21518 0 0 28399 0 0 22358 0 0 21648 0 0 4078 0 0 18592 0 0 16237 0 0 19480 0 0 20244 0 0 27010 0 0 21513 0 0 28659 0 0 22517 0 0 21647 0 0 4357.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 35746000 35746000 0 0 NaN 327 188 106 106 3142 3333 3564 3952 3564 3952 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10067 3564 3952 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10067 3564 3952 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10067 O75475 177 O75475 O75475 PC4 and SFRS1-interacting protein PSIP1 sp|O75475|PSIP1_HUMAN PC4 and SFRS1-interacting protein OS=Homo sapiens GN=PSIP1 PE=1 SV=1 0.999499 33.1388 7.20763E-13 209.4 181.9 209.4 1 S AGVVTTATASVNLKVSPKRGRPAATEVKIPK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX QVETEEAGVVTTATASVNLKVS(0.999)PK QVET(-159.36)EEAGVVT(-87.44)T(-70.21)AT(-48.16)AS(-33.14)VNLKVS(33.14)PK 22 4 0.57421 4765.2 0 0 6168 0 0 4740.3 0 0 5499.9 0 0 4601.6 0 0 4825.2 0 0 5934.4 0 0 5280.3 0 0 5388.8 0 0 35490 0 0 4509 0 0 5822.9 0 0 4775.4 0 0 5677 0 0 4696.3 0 0 4939.2 0 0 5961.7 0 0 6348.3 0 0 5340.2 0 0 33541 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30570000 30570000 0 0 NaN 328 188 177 177 3165 3357 3588 3978 3588 3978 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19201 3588 3978 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19201 3588 3978 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19201 O75494 209 O75494 O75494 Serine/arginine-rich splicing factor 10 SRSF10 sp|O75494|SRS10_HUMAN Serine/arginine-rich splicing factor 10 OS=Homo sapiens GN=SRSF10 PE=1 SV=1 0.979837 17.6619 3.10551E-05 138.24 107.01 138.24 1 S KSRSRSASHTKTRGTSKTDSKTHYKSGSRYE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX GT(0.017)S(0.98)KT(0.003)DSK GT(-17.66)S(17.66)KT(-24.63)DS(-77.59)K 3 3 0.41746 27506 0 0 29974 0 0 27231 0 0 29759 0 0 23816 0 0 25928 0 0 24531 0 0 27248 0 0 31214 0 0 2383.8 0 0 26027 0 0 28314 0 0 27395 0 0 30507 0 0 24386 0 0 26181 0 0 25119 0 0 27352 0 0 30516 0 0 2875.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 96089000 96089000 0 0 NaN 329 189 209 209 1663 1754 1896 2114 1896 2114 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6913 1896 2114 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6913 1896 2114 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6913 O75494 133 O75494 O75494 Serine/arginine-rich splicing factor 10 SRSF10 sp|O75494|SRS10_HUMAN Serine/arginine-rich splicing factor 10 OS=Homo sapiens GN=SRSF10 PE=1 SV=1 1 83.0583 3.66447E-05 151.48 65.148 151.48 1;2 S RSRSRSYERRRSRSRSFDYNYRRSYSPRNSR X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX S(1)FDYNYR S(83.06)FDY(-83.06)NY(-106.76)R 1 2 -0.27306 78745 90103 0 77063 94715 0 81669 88306 0 75156 93160 0 63084 90350 0 91418 94303 0 87779 100850 0 87844 101830 0 83890 93586 0 6749.6 70167 0 74524 85254 0 72788 89465 0 81887 89068 0 77545 95767 0 65460 91709 0 90875 94701 0 88059 101950 0 88455 103970 0 82939 92649 0 8388.6 68427 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 356200000 253310000 102890000 0 NaN 330 189 133 133 3735;4280 3975;4560 4239;4860 4712;5392;5393;5394 4239 4712 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13515 4239 4712 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13515 4239 4712 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13515 O75494 158 O75494 O75494 Serine/arginine-rich splicing factor 10 SRSF10 sp|O75494|SRS10_HUMAN Serine/arginine-rich splicing factor 10 OS=Homo sapiens GN=SRSF10 PE=1 SV=1 0.993684 21.9682 0.000309803 110.31 80.958 110.31 1 S SPRNSRPTGRPRRSRSHSDNDRFKHRNRSFS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(0.994)HS(0.006)DNDRFK S(21.97)HS(-21.97)DNDRFK 1 3 -0.19092 11500 0 0 10913 0 0 10892 0 0 13424 0 0 13183 0 0 12977 0 0 11595 0 0 12652 0 0 12400 0 0 3146.1 0 0 10880 0 0 10323 0 0 11027 0 0 13623 0 0 13221 0 0 13030 0 0 11901 0 0 12798 0 0 12201 0 0 3255.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14414000 14414000 0 0 NaN 331 189 158 158 3838 4091 4366 4855 4366 4855 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6871 4366 4855 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6871 4366 4855 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6871 O75494 131 O75494 O75494 Serine/arginine-rich splicing factor 10 SRSF10 sp|O75494|SRS10_HUMAN Serine/arginine-rich splicing factor 10 OS=Homo sapiens GN=SRSF10 PE=1 SV=1 0.99998 47.3137 0.000459664 109.72 79.916 109.72 2 S YRRSRSRSYERRRSRSRSFDYNYRRSYSPRN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(1)RS(1)FDYNYR S(47.31)RS(41.19)FDY(-41.19)NY(-54)R 1 2 -0.19835 0 90103 0 0 94715 0 0 88306 0 0 93160 0 0 90350 0 0 94303 0 0 100850 0 0 101830 0 0 93586 0 0 70167 0 0 85254 0 0 89465 0 0 89068 0 0 95767 0 0 91709 0 0 94701 0 0 101950 0 0 103970 0 0 92649 0 0 68427 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 102890000 0 102890000 0 NaN 332 189 131 131 4280 4560 4860 5392;5393;5394 4860 5393 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11483 4860 5393 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11483 4860 5393 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11483 O75494 251 O75494 O75494 Serine/arginine-rich splicing factor 10 SRSF10 sp|O75494|SRS10_HUMAN Serine/arginine-rich splicing factor 10 OS=Homo sapiens GN=SRSF10 PE=1 SV=1 0.702089 3.72435 0.00307651 94.767 70.424 94.767 1 S KSQSRSQSRSRSKSRSRSWTSPKSSGH____ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX S(0.702)RS(0.298)WTSPK S(3.72)RS(-3.72)WT(-38.97)S(-65.38)PK 1 3 0.15628 20188 0 0 12507 0 0 20313 0 0 15247 0 0 15047 0 0 16761 0 0 12451 0 0 14550 0 0 14945 0 0 1228.5 0 0 19103 0 0 11830 0 0 20378 0 0 15512 0 0 15546 0 0 16707 0 0 12867 0 0 14718 0 0 14641 0 0 1493.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13038000 13038000 0 0 NaN 333 189 251 251 4310 4595 4896 5439 4896 5439 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10095 4896 5439 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10095 4896 5439 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10095 O75533 349 O75533 O75533 Splicing factor 3B subunit 1 SF3B1 sp|O75533|SF3B1_HUMAN Splicing factor 3B subunit 1 OS=Homo sapiens GN=SF3B1 PE=1 SV=3 0.476458 0 0.0260951 56.327 31.008 56.327 S RKSRWDETPASQMGGSTPVLTPGKTPIGTPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPPXXXXXXX WDETPAS(0.006)QMGGS(0.476)T(0.476)PVLT(0.04)PGK WDET(-33.43)PAS(-18.66)QMGGS(0)T(0)PVLT(-10.72)PGK 12 3 -0.45501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 334 190 349 349 5331 5679 6055 6729 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19092 6055 6729 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19092 6055 6729 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19092 O75534 514 O75534 O75534 Cold shock domain-containing protein E1 CSDE1 sp|O75534|CSDE1_HUMAN Cold shock domain-containing protein E1 OS=Homo sapiens GN=CSDE1 PE=1 SV=2 0.999917 40.7903 0.00293945 92.747 67.126 92.747 1 S PGQQVATCVRLLGRNSNSKRLLGYVATLKDN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX LLGRNS(1)NSK LLGRNS(40.79)NS(-40.79)K 6 3 0.33726 42680 0 0 60211 0 0 41507 0 0 58856 0 0 23776 0 0 46683 0 0 20855 0 0 42200 0 0 64299 0 0 1700.2 0 0 40382 0 0 56872 0 0 41640 0 0 60319 0 0 25175 0 0 47283 0 0 22558 0 0 42554 0 0 61601 0 0 2577.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 46290000 46290000 0 0 NaN 335 191 514 514 2433 2571 2765 3088 2765 3088 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11057 2765 3088 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11057 2765 3088 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11057 O75554 262 O75554 O75554 WW domain-binding protein 4 WBP4 sp|O75554|WBP4_HUMAN WW domain-binding protein 4 OS=Homo sapiens GN=WBP4 PE=1 SV=1 0.903687 9.72349 0.0034296 91.355 66.502 91.355 1 S PKIKFKEKNKNSDGGSDPETQKEKSIQKQNS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY) XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX NS(0.096)DGGS(0.904)DPETQK NS(-9.72)DGGS(9.72)DPET(-54.18)QK 6 3 -0.30482 9657 0 0 8214.5 0 0 10376 0 0 8652.1 0 0 9363.4 0 0 11593 0 0 7619.1 0 0 8935.5 0 0 10287 0 0 2577.1 0 0 9140.7 0 0 7762.5 0 0 10391 0 0 8904.3 0 0 9539.7 0 0 11461 0 0 7912.4 0 0 9143.6 0 0 10037 0 0 2633.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5788800 5788800 0 0 NaN 336 192 262 262 2912 3086 3306 3666 3306 3666 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6813 3306 3666 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6813 3306 3666 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6813 O75554 277 O75554 O75554 WW domain-binding protein 4 WBP4 sp|O75554|WBP4_HUMAN WW domain-binding protein 4 OS=Homo sapiens GN=WBP4 PE=1 SV=1 0.997357 25.7676 2.07987E-09 177.77 123.19 177.77 1 S SDPETQKEKSIQKQNSLGSNEEKSKTLKKSN Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX QNS(0.997)LGS(0.003)NEEK QNS(25.77)LGS(-25.77)NEEK 3 2 -2.5345 91140 0 0 15919 0 0 88408 0 0 16314 0 0 23908 0 0 89848 0 0 26907 0 0 45173 0 0 18115 0 0 3982.3 0 0 86232 0 0 15040 0 0 88395 0 0 17908 0 0 28105 0 0 86225 0 0 27004 0 0 47163 0 0 18247 0 0 4795.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 49938000 49938000 0 0 NaN 337 192 277 277 3093 3281 3510;3511 3891;3892 3510 3891 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8455 3510 3891 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8455 3510 3891 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8455 O75569 18 O75569 O75569 Interferon-inducible double-stranded RNA-dependent protein kinase activator A PRKRA sp|O75569|PRKRA_HUMAN Interferon-inducible double-stranded RNA-dependent protein kinase activator A OS=Homo sapiens GN=PRKRA PE=1 SV=1 0.996797 24.9308 7.3969E-21 270.06 232.34 270.06 1 S QSRHRAEAPPLEREDSGTFSLGKMITAKPGK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX EDS(0.997)GT(0.003)FSLGK EDS(24.93)GT(-24.93)FS(-95.83)LGK 3 2 -0.73978 51743 0 0 48239 0 0 49752 0 0 48091 0 0 67740 0 0 48529 0 0 74229 0 0 58997 0 0 50982 0 0 17767 0 0 48955 0 0 45569 0 0 50445 0 0 49395 0 0 67750 0 0 48788 0 0 74611 0 0 59308 0 0 51290 0 0 18095 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 114070000 114070000 0 0 NaN 338 193 18 18 911 964 1045 1154 1045 1154 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15944 1045 1154 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15944 1045 1154 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15944 O75592 2882 O75592 O75592 E3 ubiquitin-protein ligase MYCBP2 MYCBP2 sp|O75592|MYCB2_HUMAN E3 ubiquitin-protein ligase MYCBP2 OS=Homo sapiens GN=MYCBP2 PE=1 SV=3 0.999995 52.7142 5.27783E-12 183.59 164.38 183.59 1 S PKDSTDSPGSENRAPSPHVVQENLHSEVVEV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP APS(1)PHVVQENLHSEVVEVCTSSTLK APS(52.71)PHVVQENLHS(-52.71)EVVEVCT(-157.98)S(-165.18)S(-171.62)T(-177.08)LK 3 4 0.3528 3364.6 0 0 3602.9 0 0 4188.5 0 0 4744.5 0 0 4122.8 0 0 3593.4 0 0 4430.4 0 0 5087.2 0 0 4350.4 0 0 21127 0 0 3186.9 0 0 3410.1 0 0 4170 0 0 4783.3 0 0 4192 0 0 3711.8 0 0 4492.9 0 0 5681.5 0 0 4295.9 0 0 20012 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 31202000 31202000 0 0 NaN 339 194 2882 2882 370 396 430 478 430 478 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18672 430 478 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18672 430 478 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18672 O75592 3467 O75592 O75592 E3 ubiquitin-protein ligase MYCBP2 MYCBP2 sp|O75592|MYCB2_HUMAN E3 ubiquitin-protein ligase MYCBP2 OS=Homo sapiens GN=MYCBP2 PE=1 SV=3 0.994796 22.8184 0.00279432 97.183 72.832 91.238 1 S ILPARVKAIPRRRVNSGDTEVGSSLLRHPSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPXXXX RVNS(0.995)GDT(0.005)EVGSSLLR RVNS(22.82)GDT(-22.82)EVGS(-53.84)S(-57.99)LLR 4 3 -0.036355 20571 0 0 19005 0 0 24810 0 0 21194 0 0 27010 0 0 23423 0 0 29791 0 0 25649 0 0 17299 0 0 28577 0 0 19481 0 0 17966 0 0 24771 0 0 21664 0 0 27307 0 0 23460 0 0 29849 0 0 26503 0 0 17599 0 0 27502 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 46655000 46655000 0 0 NaN 340 194 3467 3467 3548;5193 3766;5536 4012;5900 4453;6556 4012 4453 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13409 5900 6556 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16249 5900 6556 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16249 O75592 2751 O75592 O75592 E3 ubiquitin-protein ligase MYCBP2 MYCBP2 sp|O75592|MYCB2_HUMAN E3 ubiquitin-protein ligase MYCBP2 OS=Homo sapiens GN=MYCBP2 PE=1 SV=3 0.907559 9.92798 8.83489E-11 190.55 116.16 190.55 1 S SDAAKLRSDSHSRSLSPNHNTLQTLKSDGRM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX S(0.092)LS(0.908)PNHNTLQTLK S(-9.93)LS(9.93)PNHNT(-37.33)LQT(-128.73)LK 3 3 0.516 8837.3 0 0 7921.7 0 0 9601 0 0 7968.3 0 0 9593.2 0 0 15787 0 0 30608 0 0 23388 0 0 8906.4 0 0 4541.2 0 0 8365.2 0 0 7483.6 0 0 9663.3 0 0 8304.4 0 0 10012 0 0 15579 0 0 29553 0 0 23302 0 0 9708.4 0 0 4817.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21322000 21322000 0 0 NaN 341 194 2751 2751 3996 4261 4549 5057 4549 5057 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14662 4549 5057 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14662 4549 5057 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14662 O75607 13 O75607 O75607 Nucleoplasmin-3 NPM3 sp|O75607|NPM3_HUMAN Nucleoplasmin-3 OS=Homo sapiens GN=NPM3 PE=1 SV=3 0.999624 34.2435 1.9768E-42 233.31 211.87 233.31 1 S ___MAAGTAAALAFLSQESRTRAGGVGGLRV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPXXXXXXXXXXX AAGTAAALAFLS(1)QESR AAGT(-130.68)AAALAFLS(34.24)QES(-34.24)R 12 2 -0.46886 8719.1 0 0 10415 0 0 11049 0 0 6909.2 0 0 13971 0 0 9195.5 0 0 13730 0 0 11786 0 0 8780.4 0 0 64939 0 0 8259.2 0 0 9818.9 0 0 11027 0 0 7344.9 0 0 13997 0 0 9269.8 0 0 13852 0 0 13678 0 0 8873.6 0 0 61421 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 139370000 139370000 0 0 NaN 342 195 13 13 36 38 42 52 42 52 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23762 42 52 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23762 42 52 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23762 O75665 774 O75665 O75665 Oral-facial-digital syndrome 1 protein OFD1 sp|O75665|OFD1_HUMAN Oral-facial-digital syndrome 1 protein OS=Homo sapiens GN=OFD1 PE=1 SV=1 0.764737 5.1662 0.00473245 92.943 57.279 92.943 1 S HIASPSPCPDRMPLPSPTESRHSLSIPPVSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX MPLPS(0.765)PT(0.233)ES(0.003)R MPLPS(5.17)PT(-5.17)ES(-24.84)R 5 2 -0.32025 22352 0 0 18895 0 0 21094 0 0 18078 0 0 12954 0 0 22048 0 0 14456 0 0 18227 0 0 19560 0 0 9429.4 0 0 21146 0 0 17845 0 0 21216 0 0 18675 0 0 13652 0 0 21892 0 0 14783 0 0 18715 0 0 19084 0 0 9300.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21699000 21699000 0 0 NaN 343 196 774 774 2725 2890 3099 3446 3099 3446 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14673 3099 3446 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14673 3099 3446 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14673 O75665 686 O75665 O75665 Oral-facial-digital syndrome 1 protein OFD1 sp|O75665|OFD1_HUMAN Oral-facial-digital syndrome 1 protein OS=Homo sapiens GN=OFD1 PE=1 SV=1 0.957237 15.0007 0.00845994 85.729 56.773 85.729 1 S PSLHLLEAFKNITSSSPERHIFGEDRVVSEQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX NIT(0.003)S(0.009)S(0.03)S(0.957)PER NIT(-25.04)S(-20.03)S(-15)S(15)PER 6 2 0.00068153 14525 0 0 11193 0 0 12469 0 0 12829 0 0 7934.7 0 0 13854 0 0 7604.5 0 0 11052 0 0 11184 0 0 3547.3 0 0 13737 0 0 10583 0 0 12617 0 0 13089 0 0 8318.6 0 0 13812 0 0 7854.6 0 0 11302 0 0 10884 0 0 3596 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8484100 8484100 0 0 NaN 344 196 686 686 2834 3004 3217 3570 3217 3570 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7130 3217 3570 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7130 3217 3570 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7130 O75665 735 O75665 O75665 Oral-facial-digital syndrome 1 protein OFD1 sp|O75665|OFD1_HUMAN Oral-facial-digital syndrome 1 protein OS=Homo sapiens GN=OFD1 PE=1 SV=1 0.984177 19.3776 0.00685433 82.85 50.353 82.85 1 S SAASRLRGGTSSRRLSSTPLPKAKRSLESEM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX RLS(0.984)S(0.011)T(0.004)PLPK RLS(19.38)S(-19.38)T(-23.43)PLPK 3 3 -0.44263 16711 0 0 8137.1 0 0 15565 0 0 8103 0 0 7248.2 0 0 15840 0 0 6819.8 0 0 10701 0 0 8745.2 0 0 1605.4 0 0 15809 0 0 7686.6 0 0 15637 0 0 8446.3 0 0 7842.3 0 0 15470 0 0 7015.2 0 0 10982 0 0 8547.2 0 0 1759.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26650000 26650000 0 0 NaN 345 196 735 735 3349 3551 3789 4207 3789 4207 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13260 3789 4207 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13260 3789 4207 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13260 O75674 323 O75674 O75674 TOM1-like protein 1 TOM1L1 sp|O75674|TM1L1_HUMAN TOM1-like protein 1 OS=Homo sapiens GN=TOM1L1 PE=1 SV=2 0.982113 17.3985 5.09364E-08 158.57 142.27 158.57 1 S SEPSAPSQDLLDLSPSPRMPRATLGELNTMN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX EATNTTSEPSAPSQDLLDLS(0.018)PS(0.982)PR EAT(-143.51)NT(-138.58)T(-134.62)S(-130.11)EPS(-87.86)APS(-50.08)QDLLDLS(-17.4)PS(17.4)PR 22 3 -2.073 4664.4 0 0 6697.4 0 0 4339 0 0 7587.1 0 0 5051 0 0 5200.1 0 0 4417 0 0 5478 0 0 7637.1 0 0 31786 0 0 4412.5 0 0 6331.9 0 0 4395.4 0 0 7697.6 0 0 5077.8 0 0 5382.2 0 0 4614.7 0 0 6441.9 0 0 7398.9 0 0 30057 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14232000 14232000 0 0 NaN 346 197 323 323 890 943 1022 1130 1022 1130 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18306 1022 1130 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18306 1022 1130 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18306 O75676 681 O75676 O75676 Ribosomal protein S6 kinase alpha-4 RPS6KA4 sp|O75676|KS6A4_HUMAN Ribosomal protein S6 kinase alpha-4 OS=Homo sapiens GN=RPS6KA4 PE=1 SV=1 0.489999 0 0.0350392 50.189 24.645 50.189 S EGLRGSSWLQDGSARSSPPLRTPDVLESSGP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.49)S(0.49)PPLRT(0.02)PDVLESSGPAVR S(0)S(0)PPLRT(-13.94)PDVLES(-36.32)S(-36.03)GPAVR 1 3 -1.3295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 347 198 681 681 4392 4680 4984 5531 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16021 4984 5531 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16021 4984 5531 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16021 O75676 682 O75676 O75676 Ribosomal protein S6 kinase alpha-4 RPS6KA4 sp|O75676|KS6A4_HUMAN Ribosomal protein S6 kinase alpha-4 OS=Homo sapiens GN=RPS6KA4 PE=1 SV=1 0.489999 0 0.0350392 50.189 24.645 50.189 S GLRGSSWLQDGSARSSPPLRTPDVLESSGPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.49)S(0.49)PPLRT(0.02)PDVLESSGPAVR S(0)S(0)PPLRT(-13.94)PDVLES(-36.32)S(-36.03)GPAVR 2 3 -1.3295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 348 198 682 682 4392 4680 4984 5531 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16021 4984 5531 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16021 4984 5531 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16021 O75683 138 O75683 O75683 Surfeit locus protein 6 SURF6 sp|O75683|SURF6_HUMAN Surfeit locus protein 6 OS=Homo sapiens GN=SURF6 PE=1 SV=3 1 107.788 0.000569202 107.79 44.164 107.79 1 S EKIQEARGQGSAKELSPAALEKRRRRKQERD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX ELS(1)PAALEK ELS(107.79)PAALEK 3 2 -0.25722 26924 0 0 45483 0 0 28444 0 0 40797 0 0 15839 0 0 25986 0 0 15087 0 0 31367 0 0 42798 0 0 11991 0 0 25483 0 0 42940 0 0 28398 0 0 41937 0 0 16833 0 0 26798 0 0 16153 0 0 31616 0 0 41053 0 0 12017 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 172530000 172530000 0 0 NaN 349 199 138 138 1050 1106 1194 1313 1194 1313 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16577 1194 1313 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16577 1194 1313 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16577 O75683 74 O75683 O75683 Surfeit locus protein 6 SURF6 sp|O75683|SURF6_HUMAN Surfeit locus protein 6 OS=Homo sapiens GN=SURF6 PE=1 SV=3 0.997571 26.4544 0.0117335 67.214 55.348 67.214 1 S EEKAAEHKAKSLGEKSPAASGARRPEAAKEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPXXXXXXXX SLGEKS(0.998)PAAS(0.002)GAR S(-37.64)LGEKS(26.45)PAAS(-26.45)GAR 6 3 -0.087567 11908 0 0 14749 0 0 12059 0 0 15698 0 0 7629.7 0 0 11877 0 0 9426.2 0 0 12112 0 0 15418 0 0 2905.2 0 0 11269 0 0 13938 0 0 12083 0 0 15998 0 0 8035.2 0 0 12084 0 0 9672.8 0 0 12228 0 0 14959 0 0 3015.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11010000 11010000 0 0 NaN 350 199 74 74 3933 4192 4474 4973 4474 4973 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8635 4474 4973 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8635 4474 4973 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8635 O75694 992 O75694 O75694 Nuclear pore complex protein Nup155 NUP155 sp|O75694|NU155_HUMAN Nuclear pore complex protein Nup155 OS=Homo sapiens GN=NUP155 PE=1 SV=1 0.996009 23.9721 0.000219242 108.32 79.366 108.32 1 S DTLQELVNQSKAAPQSPSVPKKPGPPVLSSD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX AAPQS(0.996)PS(0.004)VPK AAPQS(23.97)PS(-23.97)VPK 5 3 0.40605 15268 0 0 16656 0 0 14783 0 0 16880 0 0 11535 0 0 12658 0 0 12304 0 0 13654 0 0 15226 0 0 2182.5 0 0 14445 0 0 15736 0 0 14875 0 0 17250 0 0 11912 0 0 12893 0 0 12568 0 0 13723 0 0 14899 0 0 2371.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 87541000 87541000 0 0 NaN 351 201 992 992 52 56 61 73 61 73 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10358 61 73 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10358 61 73 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10358 O75808 335 O75808 O75808 Calpain-15 CAPN15 sp|O75808|CAN15_HUMAN Calpain-15 OS=Homo sapiens GN=CAPN15 PE=1 SV=1 0.91404 13.4883 6.76112E-05 102.43 82.326 102.43 1 S DIIDLAGDTVRYTPASPSSPDFTTWSCAKCT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPXX YT(0.027)PAS(0.914)PS(0.041)S(0.018)PDFTTWSCAK Y(-48.65)T(-15.28)PAS(13.49)PS(-13.49)S(-17.08)PDFT(-70.63)T(-70.05)WS(-86.49)CAK 5 3 -0.64068 6186.7 0 0 8328.8 0 0 6542.8 0 0 8464.3 0 0 6688.8 0 0 7690.7 0 0 7562.2 0 0 8327.9 0 0 9412 0 0 18731 0 0 5855.6 0 0 7868.7 0 0 6571.2 0 0 8670.2 0 0 6793.3 0 0 7786.6 0 0 7706.4 0 0 8893.2 0 0 9208.4 0 0 17830 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9249000 9249000 0 0 NaN 352 202 335 335 5450 5806 6200 6901 6200 6901 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19327 6200 6901 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19327 6200 6901 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19327 O75821 42 O75821 O75821 Eukaryotic translation initiation factor 3 subunit G EIF3G sp|O75821|EIF3G_HUMAN Eukaryotic translation initiation factor 3 subunit G OS=Homo sapiens GN=EIF3G PE=1 SV=2 0.86782 8.19126 1.01859E-08 173.01 159.56 173.01 1 S TSELLKGIPLATGDTSPEPELLPGAPLPPPK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPPPPPP GIPLAT(0.001)GDT(0.132)S(0.868)PEPELLPGAPLPPPK GIPLAT(-31.86)GDT(-8.19)S(8.19)PEPELLPGAPLPPPK 10 4 -0.094057 27243 0 0 28865 0 0 28137 0 0 26055 0 0 19812 0 0 25205 0 0 20150 0 0 30353 0 0 31016 0 0 75271 0 0 25782 0 0 27252 0 0 28179 0 0 26911 0 0 20612 0 0 25509 0 0 20792 0 0 32515 0 0 30142 0 0 71579 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 436860000 436860000 0 0 NaN 353 203 42 42 1476 1553 1675 1855 1675 1855 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23389 1675 1855 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23389 1675 1855 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23389 O75822 11 O75822 O75822 Eukaryotic translation initiation factor 3 subunit J EIF3J sp|O75822|EIF3J_HUMAN Eukaryotic translation initiation factor 3 subunit J OS=Homo sapiens GN=EIF3J PE=1 SV=2 0.977194 16.3196 4.47171E-33 239.87 226.44 146.03 1 S _____MAAAAAAAGDSDSWDADAFSVEDPVR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPPPPPP AAAAAAAGDS(0.977)DS(0.023)WDADAFSVEDPVRK AAAAAAAGDS(16.32)DS(-16.32)WDADAFS(-58.82)VEDPVRK 10 3 -1.9927 32908 0 0 37832 0 0 30454 0 0 40484 0 0 37749 0 0 30788 0 0 36505 0 0 48100 0 0 42233 0 0 783600 0 0 31130 0 0 35754 0 0 30893 0 0 41250 0 0 37865 0 0 32986 0 0 37375 0 0 71188 0 0 41428 0 0 738960 0 0 11 0 0 11 0 0 11 0 0 11 0 0 11 0 0 11 0 0 11 0 0 11 0 0 11 0 0 11 0 0 275410000 275410000 0 0 13.913 354 204 11 11 0 1 1;2;3;4 1;2;3;4;5;6;7;8;9;10;11 4 11 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22664 1 3 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21051 1 3 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21051 O75909 340 O75909 O75909 Cyclin-K CCNK sp|O75909|CCNK_HUMAN Cyclin-K OS=Homo sapiens GN=CCNK PE=1 SV=2 1 132.244 3.86E-05 132.24 107.71 132.24 1 S PQPSSPRQVKRAVVVSPKEENKAAEPPPPKI X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX AVVVS(1)PKEENK AVVVS(132.24)PKEENK 5 4 0.27981 54837 0 0 37996 0 0 50886 0 0 41092 0 0 36001 0 0 54198 0 0 33888 0 0 42562 0 0 43208 0 0 6018.5 0 0 51875 0 0 35912 0 0 51280 0 0 42213 0 0 37391 0 0 53606 0 0 34852 0 0 43325 0 0 42238 0 0 6652.2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 71791000 71791000 0 0 NaN 355 205 340 340 581;582 619;620 660;661 735;736 661 736 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11858 661 736 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11858 661 736 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11858 O75909 324 O75909 O75909 Cyclin-K CCNK sp|O75909|CCNK_HUMAN Cyclin-K OS=Homo sapiens GN=CCNK PE=1 SV=2 0.994937 22.9003 4.49068E-05 132.06 66.339 132.06 2 S QPAQQQQPAQQPKKPSPQPSSPRQVKRAVVV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX KPS(0.995)PQPS(0.013)S(0.992)PR KPS(22.9)PQPS(-21.15)S(21.15)PR 3 2 0.51871 0 15740 0 0 13647 0 0 16474 0 0 13541 0 0 12456 0 0 15035 0 0 12763 0 0 14251 0 0 13556 0 0 1927.5 0 0 14897 0 0 12892 0 0 16497 0 0 13934 0 0 12883 0 0 14998 0 0 12998 0 0 14383 0 0 13342 0 0 2144.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 40630000 0 40630000 0 NaN 356 205 324 324 2171 2293;2294 2469 2749 2469 2749 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7170 2469 2749 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7170 2469 2749 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7170 O75909 329 O75909 O75909 Cyclin-K CCNK sp|O75909|CCNK_HUMAN Cyclin-K OS=Homo sapiens GN=CCNK PE=1 SV=2 0.999013 30.0545 2.78175E-06 138.77 76.726 138.77 1;2 S QQPAQQPKKPSPQPSSPRQVKRAVVVSPKEE X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX KPSPQPS(0.001)S(0.999)PR KPS(-61.9)PQPS(-30.05)S(30.05)PR 8 3 0.34368 42860 15740 0 32517 13647 0 40592 16474 0 35215 13541 0 27586 12456 0 42597 15035 0 28554 12763 0 37651 14251 0 36275 13556 0 4683.8 1927.5 0 40548 14897 0 30733 12892 0 40847 16497 0 36111 13934 0 28783 12883 0 42314 14998 0 29231 12998 0 38099 14383 0 35465 13342 0 5281.7 2144.8 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 201450000 160820000 40630000 0 NaN 357 205 329 329 2171 2293;2294 2468;2469 2748;2749 2468 2748 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6701 2468 2748 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6701 2468 2748 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6701 O75925 503 O75925 O75925 E3 SUMO-protein ligase PIAS1 PIAS1 sp|O75925|PIAS1_HUMAN E3 SUMO-protein ligase PIAS1 OS=Homo sapiens GN=PIAS1 PE=1 SV=2 0.997994 27.0664 0.00278412 97.2 76.33 97.2 1 S SPLNNKGILSLPHQASPVSRTPSLPAVDTSY Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPXXXXXXXXXXX GILSLPHQAS(0.998)PVS(0.002)R GILS(-43.45)LPHQAS(27.07)PVS(-27.07)R 10 2 0.74942 8137.7 0 0 9018.7 0 0 10107 0 0 9691.1 0 0 8445.3 0 0 8615.2 0 0 8627.5 0 0 10354 0 0 9629.3 0 0 18778 0 0 7707.7 0 0 8523.5 0 0 10044 0 0 9892.2 0 0 8671.9 0 0 8740.6 0 0 8800.8 0 0 10884 0 0 9458.7 0 0 17921 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12316000 12316000 0 0 NaN 358 206 503 503 1473 1550 1672 1852 1672 1852 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15898 1672 1852 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15898 1672 1852 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15898 O75925 488 O75925 O75925 E3 SUMO-protein ligase PIAS1 PIAS1 sp|O75925|PIAS1_HUMAN E3 SUMO-protein ligase PIAS1 OS=Homo sapiens GN=PIAS1 PE=1 SV=2 0.97177 15.3716 0.000842857 99.511 82.433 99.511 1 S EEPSAKRTCPSLSPTSPLNNKGILSLPHQAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY) XXXXXXXPPPPPPPPPPPPPPXXXXXXXXXX TCPSLSPT(0.028)S(0.972)PLNNK T(-68.09)CPS(-61.42)LS(-46.99)PT(-15.37)S(15.37)PLNNK 9 3 -1.0321 14194 0 0 9833.2 0 0 12344 0 0 10831 0 0 11743 0 0 12226 0 0 10971 0 0 11638 0 0 11750 0 0 9352.6 0 0 13424 0 0 9294.8 0 0 12528 0 0 11083 0 0 11942 0 0 12203 0 0 11226 0 0 11978 0 0 11560 0 0 9075.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 31231000 31231000 0 0 NaN 359 206 488 488 4650 4961 5285 5873 5285 5873 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15009 5285 5873 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15009 5285 5873 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15009 O75928 499 O75928 O75928 E3 SUMO-protein ligase PIAS2 PIAS2 sp|O75928|PIAS2_HUMAN E3 SUMO-protein ligase PIAS2 OS=Homo sapiens GN=PIAS2 PE=1 SV=3 0.984018 18.0504 6.05933E-07 141.34 104.57 141.34 1 S PPAKRKCIFMSETQSSPTKGVLMYQPSSVRV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX CIFMSETQS(0.015)S(0.984)PT(0.001)K CIFMS(-69.36)ET(-51.72)QS(-18.05)S(18.05)PT(-32.45)K 10 3 -0.92261 10222 0 0 9119.6 0 0 10991 0 0 10040 0 0 12327 0 0 11609 0 0 10197 0 0 10614 0 0 9867.2 0 0 7559.2 0 0 9675.7 0 0 8620.3 0 0 11035 0 0 10278 0 0 12400 0 0 11568 0 0 10473 0 0 10913 0 0 9749.9 0 0 7363.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14989000 14989000 0 0 NaN 360 207 499 499 609 648 690 766 690 766 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17347 690 766 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17347 690 766 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17347 O75995 146 O75995 O75995 SAM and SH3 domain-containing protein 3 SASH3 sp|O75995|SASH3_HUMAN SAM and SH3 domain-containing protein 3 OS=Homo sapiens GN=SASH3 PE=1 SV=2 0.687607 5.47923 2.71719E-12 188.4 181.75 188.4 1 S SEQEEHELPVLSRQASTGSELCSPSPGSGSF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP QAS(0.688)T(0.195)GS(0.118)ELCSPSPGSGSFGEEPPAPQYTGPFCGR QAS(5.48)T(-5.48)GS(-7.67)ELCS(-44.17)PS(-75.49)PGS(-98.22)GS(-111.92)FGEEPPAPQY(-166.76)T(-168.75)GPFCGR 3 3 0.079102 2970.6 0 0 1213.7 0 0 3102.4 0 0 810.88 0 0 5185.6 0 0 2348.5 0 0 7259.4 0 0 4964.6 0 0 1406.1 0 0 20422 0 0 2811.5 0 0 1144.2 0 0 3145.8 0 0 881.87 0 0 5163.1 0 0 2356.6 0 0 7129.5 0 0 5493.8 0 0 1635.7 0 0 19345 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 14060000 14060000 0 0 NaN 361 208 146 146 3001 3181 3404 3774;3775 3404 3774 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18518 3404 3774 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18518 3404 3774 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18518 O75995 38 O75995 O75995 SAM and SH3 domain-containing protein 3 SASH3 sp|O75995|SASH3_HUMAN SAM and SH3 domain-containing protein 3 OS=Homo sapiens GN=SASH3 PE=1 SV=2 0.804828 6.45275 0.00108623 98.421 74.449 98.421 1 S QRSSSFKDFAKSKPSSPVVSEKEFNLDDNIP X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX S(0.013)KPS(0.182)S(0.805)PVVSEK S(-17.91)KPS(-6.45)S(6.45)PVVS(-48.27)EK 5 3 0.083085 10879 0 0 9905.7 0 0 10797 0 0 7992.2 0 0 38644 0 0 11475 0 0 38038 0 0 21089 0 0 7416.2 0 0 3242.6 0 0 10294 0 0 9346.6 0 0 11216 0 0 8378.8 0 0 37534 0 0 11473 0 0 37910 0 0 20879 0 0 8616.3 0 0 3541.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17299000 17299000 0 0 NaN 362 208 38 38 3895 4150 4429 4923 4429 4923 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10026 4429 4923 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10026 4429 4923 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10026 O75995 26 O75995 O75995 SAM and SH3 domain-containing protein 3 SASH3 sp|O75995|SASH3_HUMAN SAM and SH3 domain-containing protein 3 OS=Homo sapiens GN=SASH3 PE=1 SV=2 0.726979 1.63772 0.0232412 56.951 27.611 56.951 2 S EKEPTQKKKLSLQRSSSFKDFAKSKPSSPVV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXXXXXXXXXPPPPPPPPPXXXXXXXX S(0.602)S(0.727)S(0.671)FKDFAK S(-0.83)S(1.64)S(0.83)FKDFAK 2 3 -0.42401 0 7664.1 0 0 4473.4 0 0 10019 0 0 4112.2 0 0 13994 0 0 9715.2 0 0 13932 0 0 9694.4 0 0 4126.1 0 0 6465.9 0 0 7261.1 0 0 4223.8 0 0 10002 0 0 4334.4 0 0 13956 0 0 9499.9 0 0 13916 0 0 9919.9 0 0 4487.1 0 0 6312.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 9561900 0 9561900 0 NaN 363 208 26 26 4421 4710;4711 5015 5563 5015 5563 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16745 5015 5563 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16745 5015 5563 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16745 O75995 27 O75995 O75995 SAM and SH3 domain-containing protein 3 SASH3 sp|O75995|SASH3_HUMAN SAM and SH3 domain-containing protein 3 OS=Homo sapiens GN=SASH3 PE=1 SV=2 0.814422 7.0584 0.00417476 88.552 59.009 88.552 1;2 S KEPTQKKKLSLQRSSSFKDFAKSKPSSPVVS X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX S(0.025)S(0.16)S(0.814)FKDFAK S(-15.09)S(-7.06)S(7.06)FKDFAK 3 3 0.12589 24966 7664.1 0 7454.9 4473.4 0 26082 10019 0 7707.4 4112.2 0 86985 13994 0 24633 9715.2 0 93021 13932 0 40992 9694.4 0 4035.5 4126.1 0 8253.3 6465.9 0 23628 7261.1 0 7043.9 4223.8 0 26956 10002 0 8170.3 4334.4 0 84678 13956 0 24156 9499.9 0 91960 13916 0 40733 9919.9 0 7756 4487.1 0 8720.2 6312.8 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 192850000 183290000 9561900 0 NaN 364 208 27 27 4421 4710;4711 5014;5015 5562;5563 5014 5562 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15267 5014 5562 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15267 5014 5562 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15267 O76021 427 O76021 O76021 Ribosomal L1 domain-containing protein 1 RSL1D1 sp|O76021|RL1D1_HUMAN Ribosomal L1 domain-containing protein 1 OS=Homo sapiens GN=RSL1D1 PE=1 SV=3 0.986125 18.7187 0.010136 71.929 43.763 71.929 1 S ASETPKAAESETPGKSPEKKPKIKEEAVKEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX AAES(0.001)ET(0.013)PGKS(0.986)PEK AAES(-31.95)ET(-18.72)PGKS(18.72)PEK 10 3 0.087581 31962 0 0 36395 0 0 36392 0 0 32220 0 0 19894 0 0 34838 0 0 21300 0 0 30434 0 0 40907 0 0 4327.7 0 0 30261 0 0 34357 0 0 36191 0 0 33380 0 0 21201 0 0 34756 0 0 22151 0 0 30828 0 0 39531 0 0 4779.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 155500000 155500000 0 0 NaN 365 210 427 427 27 29 32 42 32 42 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8739 32 42 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8739 32 42 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8739 O76021 361 O76021 O76021 Ribosomal L1 domain-containing protein 1 RSL1D1 sp|O76021|RL1D1_HUMAN Ribosomal L1 domain-containing protein 1 OS=Homo sapiens GN=RSL1D1 PE=1 SV=3 0.999874 38.9982 1.00849E-15 225.17 200.37 225.17 1 S KKRGRGKAQVKATNESEDEIPQLVPIGKKTP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPXXX ATNES(1)EDEIPQLVPIGK AT(-39)NES(39)EDEIPQLVPIGK 5 2 -1.9187 54266 0 0 104410 0 0 51888 0 0 111460 0 0 81971 0 0 54866 0 0 81711 0 0 83273 0 0 119860 0 0 161920 0 0 51340 0 0 98675 0 0 52753 0 0 113100 0 0 81441 0 0 58182 0 0 84232 0 0 87307 0 0 116650 0 0 154390 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 408190000 408190000 0 0 NaN 366 210 361 361 529 562 602;603 670;671;672;673;674;675 603 675 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21473 603 675 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21473 603 675 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21473 O76021 392 O76021 O76021 Ribosomal L1 domain-containing protein 1 RSL1D1 sp|O76021|RL1D1_HUMAN Ribosomal L1 domain-containing protein 1 OS=Homo sapiens GN=RSL1D1 PE=1 SV=3 0.999978 46.419 0.00423751 91.64 74.075 91.64 2 S ANEKVEIQKHATGKKSPAKSPNPSTPRGKKR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPXXXX KS(1)PAKS(0.765)PNPS(0.196)T(0.039)PR KS(46.42)PAKS(5.9)PNPS(-5.9)T(-12.93)PR 2 3 -0.16174 0 11810 0 0 27534 0 0 15199 0 0 29357 0 0 12372 0 0 14114 0 0 12376 0 0 18537 0 0 29776 0 0 2375.6 0 0 11188 0 0 26021 0 0 15075 0 0 29787 0 0 12739 0 0 14887 0 0 13074 0 0 18494 0 0 28642 0 0 2665.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 25012000 0 25012000 0 NaN 367 210 392 392 2217 2343 2524 2819 2524 2819 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7509 2524 2819 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7509 2524 2819 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7509 O76021 396 O76021 O76021 Ribosomal L1 domain-containing protein 1 RSL1D1 sp|O76021|RL1D1_HUMAN Ribosomal L1 domain-containing protein 1 OS=Homo sapiens GN=RSL1D1 PE=1 SV=3 0.764635 5.9022 0.00423751 91.64 74.075 91.64 2 S VEIQKHATGKKSPAKSPNPSTPRGKKRKALP X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPXXXXXXXX KS(1)PAKS(0.765)PNPS(0.196)T(0.039)PR KS(46.42)PAKS(5.9)PNPS(-5.9)T(-12.93)PR 6 3 -0.16174 0 11810 0 0 27534 0 0 15199 0 0 29357 0 0 12372 0 0 14114 0 0 12376 0 0 18537 0 0 29776 0 0 2375.6 0 0 11188 0 0 26021 0 0 15075 0 0 29787 0 0 12739 0 0 14887 0 0 13074 0 0 18494 0 0 28642 0 0 2665.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 25012000 0 25012000 0 NaN 368 210 396 396 2217 2343 2524 2819 2524 2819 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7509 2524 2819 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7509 2524 2819 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7509 O76094 621 O76094 O76094 Signal recognition particle subunit SRP72 SRP72 sp|O76094|SRP72_HUMAN Signal recognition particle subunit SRP72 OS=Homo sapiens GN=SRP72 PE=1 SV=3 0.961472 15.1893 3.28392E-18 241.37 193.61 203.96 1;2 S TAGASSELDASKTVSSPPTSPRPGSAATVSA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP T(0.009)VS(0.029)S(0.961)PPT(0.24)S(0.76)PRPGSAATVSASTSNIIPPR T(-20.16)VS(-15.19)S(15.19)PPT(-5.02)S(5.02)PRPGS(-61.78)AAT(-80.54)VS(-82.04)AS(-94)T(-99.83)S(-105.57)NIIPPR 4 3 0.94644 6559.5 12241 0 15300 23561 0 7523.3 13067 0 13785 24881 0 16561 36917 0 8216.7 14432 0 18530 43160 0 16653 29647 0 16272 25899 0 25454 50402 0 6210.5 11586 0 14445 22264 0 7634.5 13414 0 14157 25298 0 16298 36127 0 8638.3 15218 0 18706 43161 0 17144 30667 0 16151 26287 0 24354 48146 0 2 3 0 2 3 0 2 3 0 2 3 0 2 3 0 2 3 0 2 3 0 2 3 0 2 3 0 2 3 0 94486000 47266000 47219000 0 NaN 369 211 621 621 5021 5354;5355 5706;5707 6342;6343;6344;6345;6346 5707 6345 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15373 5706 6343 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14592 5706 6343 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14592 O76094 625 O76094 O76094 Signal recognition particle subunit SRP72 SRP72 sp|O76094|SRP72_HUMAN Signal recognition particle subunit SRP72 OS=Homo sapiens GN=SRP72 PE=1 SV=3 0.760345 5.01649 3.57415E-12 203.96 169.55 203.96 2 S SSELDASKTVSSPPTSPRPGSAATVSASTSN X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPPP T(0.009)VS(0.029)S(0.961)PPT(0.24)S(0.76)PRPGSAATVSASTSNIIPPR T(-20.16)VS(-15.19)S(15.19)PPT(-5.02)S(5.02)PRPGS(-61.78)AAT(-80.54)VS(-82.04)AS(-94)T(-99.83)S(-105.57)NIIPPR 8 3 0.94644 0 12241 0 0 23561 0 0 13067 0 0 24881 0 0 36917 0 0 14432 0 0 43160 0 0 29647 0 0 25899 0 0 50402 0 0 11586 0 0 22264 0 0 13414 0 0 25298 0 0 36127 0 0 15218 0 0 43161 0 0 30667 0 0 26287 0 0 48146 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 47219000 0 47219000 0 NaN 370 211 625 625 5021 5354;5355 5707 6344;6345;6346 5707 6345 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15373 5707 6345 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15373 5707 6345 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15373 O94759 36 O94759 O94759 Transient receptor potential cation channel subfamily M member 2 TRPM2 sp|O94759|TRPM2_HUMAN Transient receptor potential cation channel subfamily M member 2 OS=Homo sapiens GN=TRPM2 PE=1 SV=2 0.576198 2.32347 0.0156028 78.655 41.147 78.655 1 S PRRVTDLGMVSNLRRSNSSLFKSWRLQCPFG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX S(0.576)NS(0.337)S(0.086)LFK S(2.32)NS(-2.32)S(-8.24)LFK 1 2 0.13168 46351 0 0 7770.5 0 0 47503 0 0 8456.7 0 0 8845.3 0 0 44274 0 0 8127.6 0 0 20465 0 0 8278.7 0 0 4392.7 0 0 43864 0 0 7344.5 0 0 47292 0 0 9216.7 0 0 11249 0 0 42489 0 0 8311.8 0 0 21583 0 0 8162.1 0 0 4609.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17773000 17773000 0 0 NaN 371 212 36 36 4065 4335 4625 5138 4625 5138 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15253 4625 5138 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15253 4625 5138 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15253 O94761 251 O94761 O94761 ATP-dependent DNA helicase Q4 RECQL4 sp|O94761|RECQ4_HUMAN ATP-dependent DNA helicase Q4 OS=Homo sapiens GN=RECQL4 PE=1 SV=1 0.999885 41.3048 0.000183668 114.69 70.075 114.69 1 S GPEASAFQEVSIRVGSPQPSSSGGEKRRWNE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX VGS(1)PQPSSSGGEK VGS(41.3)PQPS(-41.3)S(-45.35)S(-49.4)GGEK 3 2 1.5691 18860 0 0 14545 0 0 22992 0 0 14587 0 0 17379 0 0 20845 0 0 16522 0 0 20696 0 0 17691 0 0 2848.9 0 0 17862 0 0 13740 0 0 22844 0 0 15076 0 0 17956 0 0 20618 0 0 16891 0 0 20851 0 0 17407 0 0 3161.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22212000 22212000 0 0 NaN 372 213 251 251 5125 5462 5818 6469 5818 6469 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8298 5818 6469 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8298 5818 6469 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8298 O94762 815 O94762 O94762 ATP-dependent DNA helicase Q5 RECQL5 sp|O94762|RECQ5_HUMAN ATP-dependent DNA helicase Q5 OS=Homo sapiens GN=RECQL5 PE=1 SV=2 1 74.7228 5.46576E-09 173.36 138.95 173.36 1 S APEKYTGEEDGAGGHSPAPPQTEECLRERPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPPPPPXXXX YTGEEDGAGGHS(1)PAPPQTEECLR Y(-126.07)T(-96.92)GEEDGAGGHS(74.72)PAPPQT(-74.72)EECLR 12 3 0.31091 14663 0 0 15652 0 0 15074 0 0 14515 0 0 12638 0 0 17939 0 0 14337 0 0 16410 0 0 16863 0 0 9608.2 0 0 13877 0 0 14779 0 0 15128 0 0 15028 0 0 12995 0 0 17828 0 0 14581 0 0 16809 0 0 16532 0 0 9427.1 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 20112000 20112000 0 0 NaN 373 214 815 815 5448 5804 6198 6898;6899 6198 6898 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10593 6198 6898 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10593 6198 6898 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10593 O94763 442 O94763 O94763 Unconventional prefoldin RPB5 interactor 1 URI1 sp|O94763|RMP_HUMAN Unconventional prefoldin RPB5 interactor 1 OS=Homo sapiens GN=URI1 PE=1 SV=3 0.871038 8.29576 1.11798E-34 324.4 311.92 324.4 1 S SAAEFDDRRGVLRSISCEEATCSDTSESILE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.129)IS(0.871)CEEATCSDTSESILEEEPQENQKK S(-8.3)IS(8.3)CEEAT(-81.95)CS(-154.4)DT(-202.34)S(-219.87)ES(-232.8)ILEEEPQENQKK 3 4 0.46455 4473.9 0 0 4100.7 0 0 4032.9 0 0 4039.9 0 0 3281.5 0 0 4803.9 0 0 4073.3 0 0 6029.5 0 0 5001.8 0 0 72045 0 0 4231.8 0 0 3873.5 0 0 4078.5 0 0 4164.1 0 0 3386.5 0 0 4932.2 0 0 4133.7 0 0 8171.4 0 0 4895.9 0 0 67978 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 39038000 39038000 0 0 NaN 374 215 442 442 3863 4116 4392 4886 4392 4886 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15871 4392 4886 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15871 4392 4886 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15871 O94782 67 O94782 O94782 Ubiquitin carboxyl-terminal hydrolase 1 USP1 sp|O94782|UBP1_HUMAN Ubiquitin carboxyl-terminal hydrolase 1 OS=Homo sapiens GN=USP1 PE=1 SV=1 0.939736 11.9295 1.78144E-10 175.99 149.78 175.99 1 S YRASEIDQVVPAAQSSPINCEKRENLLPFVG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPPXXXXXXXXX ASEIDQVVPAAQS(0.06)S(0.94)PINCEK AS(-126.44)EIDQVVPAAQS(-11.93)S(11.93)PINCEK 14 3 -0.20645 7232.1 0 0 8585.6 0 0 6686 0 0 10589 0 0 7858.7 0 0 8313.7 0 0 6970.7 0 0 8862.2 0 0 9633 0 0 15574 0 0 6841.3 0 0 8121.9 0 0 6776.5 0 0 10714 0 0 7895.8 0 0 8471 0 0 7211.1 0 0 9337.4 0 0 9391.9 0 0 14870 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37255000 37255000 0 0 NaN 375 217 67 67 451 480 515 577 515 577 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16606 515 577 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16606 515 577 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16606 O94804 450 O94804 O94804 Serine/threonine-protein kinase 10 STK10 sp|O94804|STK10_HUMAN Serine/threonine-protein kinase 10 OS=Homo sapiens GN=STK10 PE=1 SV=1 0.65952 2.97493 1.92221E-05 128.36 87.274 128.36 1 S GDLSPAANRSQKASQSRPNSSALETLGGEKL X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPX AS(0.332)QS(0.66)RPNS(0.003)S(0.005)ALETLGGEK AS(-2.97)QS(2.97)RPNS(-23.12)S(-21.37)ALET(-66.17)LGGEK 4 3 1.752 22556 0 0 11011 0 0 23712 0 0 11260 0 0 14130 0 0 24869 0 0 14651 0 0 17510 0 0 12211 0 0 11069 0 0 21348 0 0 10404 0 0 23694 0 0 11765 0 0 14910 0 0 24248 0 0 14822 0 0 18182 0 0 12152 0 0 10828 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12191000 12191000 0 0 NaN 376 218 450 450 490 521 561 626 561 626 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13901 561 626 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13901 561 626 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13901 O94804 454 O94804 O94804 Serine/threonine-protein kinase 10 STK10 sp|O94804|STK10_HUMAN Serine/threonine-protein kinase 10 OS=Homo sapiens GN=STK10 PE=1 SV=1 0.934826 11.9346 2.28187E-07 142.23 100.36 142.23 1 S PAANRSQKASQSRPNSSALETLGGEKLANGS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPXXXXX AS(0.001)QS(0.004)RPNS(0.935)S(0.06)ALETLGGEK AS(-28.58)QS(-23.69)RPNS(11.93)S(-11.93)ALET(-62.78)LGGEK 8 3 0.23641 26069 0 0 12945 0 0 27703 0 0 13107 0 0 14168 0 0 29182 0 0 14669 0 0 21339 0 0 14409 0 0 8178.3 0 0 24674 0 0 12229 0 0 27636 0 0 13706 0 0 15184 0 0 28450 0 0 14901 0 0 21955 0 0 14228 0 0 8194.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15268000 15268000 0 0 NaN 377 218 454 454 490 521 560 625 560 625 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13712 560 625 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13712 560 625 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13712 O94804 13 O94804 O94804 Serine/threonine-protein kinase 10 STK10 sp|O94804|STK10_HUMAN Serine/threonine-protein kinase 10 OS=Homo sapiens GN=STK10 PE=1 SV=1 0.508975 0.15592 0.0133622 62.454 29.508 62.454 1 S ___MAFANFRRILRLSTFEKRKSREYEHVRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX ILRLS(0.509)T(0.491)FEK ILRLS(0.16)T(-0.16)FEK 5 3 0.096816 5565.3 0 0 529.68 0 0 6635 0 0 1183.4 0 0 3602.2 0 0 6935.1 0 0 3975.1 0 0 3608.8 0 0 1667.6 0 0 3288.2 0 0 5270.2 0 0 504.09 0 0 6583.2 0 0 1267.6 0 0 3837.6 0 0 6659.2 0 0 3965.2 0 0 3847.8 0 0 1743.2 0 0 3179.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6927800 6927800 0 0 NaN 378 218 13 13 1887 1991 2149 2408 2149 2408 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21750 2149 2408 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21750 2149 2408 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21750 O94804 438 O94804 O94804 Serine/threonine-protein kinase 10 STK10 sp|O94804|STK10_HUMAN Serine/threonine-protein kinase 10 OS=Homo sapiens GN=STK10 PE=1 SV=1 1 116.428 9.986E-05 116.43 99.762 116.43 1 S QVAQEKQVAEQGGDLSPAANRSQKASQSRPN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXPPPPPPPPPPPPPPPXXXXXXXXXX QVAEQGGDLS(1)PAANR QVAEQGGDLS(116.43)PAANR 10 3 1.1831 15186 0 0 12076 0 0 15345 0 0 13364 0 0 26778 0 0 17603 0 0 30280 0 0 20358 0 0 13451 0 0 4657.3 0 0 14370 0 0 11415 0 0 15589 0 0 13711 0 0 26533 0 0 17498 0 0 30193 0 0 20454 0 0 13986 0 0 4856.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 132470000 132470000 0 0 NaN 379 218 438 438 3162 3354 3585 3975 3585 3975 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8924 3585 3975 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8924 3585 3975 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8924 O94806 252 O94806 O94806 Serine/threonine-protein kinase D3 PRKD3 sp|O94806|KPCD3_HUMAN Serine/threonine-protein kinase D3 OS=Homo sapiens GN=PRKD3 PE=1 SV=1 0.905938 9.83683 0.0202102 70.747 33.02 70.747 1 S SEESHVHQEPSKRIPSWSGRPIWMEKMVMCR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX IPS(0.906)WS(0.094)GR IPS(9.84)WS(-9.84)GR 3 2 -0.50175 8126.4 0 0 7137.4 0 0 9937.7 0 0 7196.6 0 0 10143 0 0 10697 0 0 8592.4 0 0 8261.4 0 0 7087.3 0 0 2634.5 0 0 7696.5 0 0 6742.8 0 0 9902.2 0 0 7441.9 0 0 10258 0 0 10540 0 0 8779.6 0 0 8460.5 0 0 7056.9 0 0 2671.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9815200 9815200 0 0 NaN 380 219 252 252 1918 2026 2187 2447 2187 2447 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15861 2187 2447 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15861 2187 2447 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15861 O94806 213 O94806 O94806 Serine/threonine-protein kinase D3 PRKD3 sp|O94806|KPCD3_HUMAN Serine/threonine-protein kinase D3 OS=Homo sapiens GN=PRKD3 PE=1 SV=1 0.994223 22.3663 0.0187493 74.152 53.25 74.152 1 S FKIPNNCSGVRKRRLSNVSLPGPGLSVPRPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX RLS(0.994)NVS(0.006)LPGPGLSVPR RLS(22.37)NVS(-22.37)LPGPGLS(-49.37)VPR 3 2 0.20946 4181.7 0 0 3088.9 0 0 5045.4 0 0 4348 0 0 5991.5 0 0 4924.9 0 0 5650.2 0 0 4510.4 0 0 4768.9 0 0 24569 0 0 3960.1 0 0 2925.1 0 0 5041.7 0 0 4396.8 0 0 6018.7 0 0 4951.8 0 0 5743.7 0 0 5280.7 0 0 4742.8 0 0 23239 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6218300 6218300 0 0 NaN 381 219 213 213 3335 3537 3774 4190 3774 4190 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18356 3774 4190 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18356 3774 4190 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18356 O94819 107 O94819 O94819 Kelch repeat and BTB domain-containing protein 11 KBTBD11 sp|O94819|KBTBB_HUMAN Kelch repeat and BTB domain-containing protein 11 OS=Homo sapiens GN=KBTBD11 PE=1 SV=1 1 80.8588 0.00748541 80.859 65.657 80.859 1 S ASPEERACPEEPAAPSPEPRVWLEDPASPEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPXXXXXXXXXXX ACPEEPAAPS(1)PEPR ACPEEPAAPS(80.86)PEPR 10 3 0.016398 14949 0 0 12138 0 0 14340 0 0 12408 0 0 12635 0 0 15488 0 0 11712 0 0 12708 0 0 12451 0 0 3616.9 0 0 14143 0 0 11468 0 0 14452 0 0 12773 0 0 12910 0 0 15359 0 0 11987 0 0 12964 0 0 12254 0 0 3699.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20352000 20352000 0 0 NaN 382 220 107 107 93 99 108 121 108 121 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9304 108 121 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9304 108 121 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9304 O94826 91 O94826 O94826 Mitochondrial import receptor subunit TOM70 TOMM70A sp|O94826|TOM70_HUMAN Mitochondrial import receptor subunit TOM70 OS=Homo sapiens GN=TOMM70A PE=1 SV=1 0.999889 39.5492 1.7316E-18 246.35 207.2 195.23 1 S GLKRNSERKTPEGRASPAPGSGHPEGPGAHL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP AS(1)PAPGSGHPEGPGAHLDMNSLDR AS(39.55)PAPGS(-39.55)GHPEGPGAHLDMNS(-150.89)LDR 2 4 -0.21465 21879 0 0 24370 0 0 23772 0 0 23406 0 0 20694 0 0 29352 0 0 34977 0 0 33456 0 0 26625 0 0 15599 0 0 20711 0 0 23016 0 0 23817 0 0 24187 0 0 21376 0 0 29236 0 0 34689 0 0 33869 0 0 26626 0 0 15463 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 135150000 135150000 0 0 NaN 383 221 91 91 477 507;508 546;547 610;611 546 610 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9548 547 611 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12464 547 611 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12464 O94874 790 O94874 O94874 E3 UFM1-protein ligase 1 UFL1 sp|O94874|UFL1_HUMAN E3 UFM1-protein ligase 1 OS=Homo sapiens GN=UFL1 PE=1 SV=2 0.977807 16.5477 0.00174898 114.51 105.04 114.51 1 S LSSSIKDLVLKSRKSSVTEE___________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX KS(0.022)S(0.978)VT(0.001)EE KS(-16.55)S(16.55)VT(-32.56)EE 3 2 -0.28279 63318 0 0 35836 0 0 64300 0 0 32922 0 0 27298 0 0 59516 0 0 30672 0 0 42234 0 0 33670 0 0 5070.1 0 0 59919 0 0 33837 0 0 64243 0 0 34409 0 0 29938 0 0 58262 0 0 31142 0 0 43186 0 0 33095 0 0 5751.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 693550000 693550000 0 0 NaN 384 223 790 790 2239 2367 2548 2845 2548 2845 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7643 2548 2845 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7643 2548 2845 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7643 O94885 507 O94885 O94885 SAM and SH3 domain-containing protein 1 SASH1 sp|O94885|SASH1_HUMAN SAM and SH3 domain-containing protein 1 OS=Homo sapiens GN=SASH1 PE=1 SV=3 0.999167 30.7878 0.0201149 82.914 39.765 82.914 1 S PDPEHLDKPKLKAGGSVESLRSSLSGQSSMS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX AGGS(0.999)VES(0.001)LR AGGS(30.79)VES(-30.79)LR 4 2 -0.3367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 385 224 507 507 208 218 236 264 236 264 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9447 236 264 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9447 236 264 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9447 O94885 170 O94885 O94885 SAM and SH3 domain-containing protein 1 SASH1 sp|O94885|SASH1_HUMAN SAM and SH3 domain-containing protein 1 OS=Homo sapiens GN=SASH1 PE=1 SV=3 0.656504 2.81317 7.82183E-12 186.85 171.21 186.85 1 S WQNFRKNQKGIMRQTSKGEDVGYVASEITMS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP QT(0.343)S(0.657)KGEDVGYVASEITMSDEER QT(-2.81)S(2.81)KGEDVGY(-74)VAS(-60.42)EIT(-102.97)MS(-114.38)DEER 3 3 -1.9486 6675.8 0 0 2857.8 0 0 5413.6 0 0 2340.7 0 0 3005.3 0 0 6961.7 0 0 2776.8 0 0 4944.3 0 0 2614.2 0 0 51352 0 0 6312.3 0 0 2696.7 0 0 5493.8 0 0 2509.2 0 0 3188.6 0 0 6843.2 0 0 2833.1 0 0 6585 0 0 2586.3 0 0 48469 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14722000 14722000 0 0 NaN 386 224 170 170 3159 3351 3582 3972 3582 3972 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18475 3582 3972 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18475 3582 3972 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18475 O94885 813 O94885 O94885 SAM and SH3 domain-containing protein 1 SASH1 sp|O94885|SASH1_HUMAN SAM and SH3 domain-containing protein 1 OS=Homo sapiens GN=SASH1 PE=1 SV=3 0.999998 57.343 0.000592274 125.18 87.095 125.18 1 S SCDPPGVTGLNKNRRSLPVSICRSCETLEGP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX S(1)LPVSICR S(57.34)LPVS(-57.34)ICR 1 2 -0.36412 27827 0 0 6721.7 0 0 28621 0 0 6652.5 0 0 7193.6 0 0 30759 0 0 6793.4 0 0 13813 0 0 7881.2 0 0 3880.9 0 0 26334 0 0 6349.3 0 0 28511 0 0 7222.1 0 0 8560.7 0 0 29550 0 0 6964.1 0 0 14629 0 0 7730.3 0 0 3974 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19127000 19127000 0 0 NaN 387 224 813 813 3969 4229 4513 5016 4513 5016 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15632 4513 5016 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15632 4513 5016 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15632 O94885 407 O94885 O94885 SAM and SH3 domain-containing protein 1 SASH1 sp|O94885|SASH1_HUMAN SAM and SH3 domain-containing protein 1 OS=Homo sapiens GN=SASH1 PE=1 SV=3 0.5 0 7.24368E-11 197.13 177.39 197.13 1 S EMKKGLGSLSHGRTCSFGGFDLTNRSLHVGS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T(0.5)CS(0.5)FGGFDLTNR T(0)CS(0)FGGFDLT(-77.1)NR 3 2 -0.34578 23232 0 0 6182.8 0 0 27426 0 0 6616.4 0 0 5121.4 0 0 26433 0 0 5070.6 0 0 12188 0 0 7157.7 0 0 22210 0 0 21999 0 0 5843.2 0 0 27103 0 0 7085.5 0 0 6515.4 0 0 25474 0 0 5221 0 0 13447 0 0 6974 0 0 21196 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19866000 19866000 0 0 NaN 388 224 407 407 4651 4962 5286 5874 5286 5874 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18698 5286 5874 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18698 5286 5874 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18698 O94888 280 O94888 O94888 UBX domain-containing protein 7 UBXN7 sp|O94888|UBXN7_HUMAN UBX domain-containing protein 7 OS=Homo sapiens GN=UBXN7 PE=1 SV=2 0.840537 7.21895 9.33047E-17 246.32 209.64 246.32 1 S DGLSSSPPKKCARSESLIDASEDSQLEAAIR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.159)ES(0.841)LIDASEDSQLEAAIR S(-7.22)ES(7.22)LIDAS(-89.71)EDS(-186.35)QLEAAIR 3 3 -0.54861 8563.7 0 0 9763 0 0 7600.4 0 0 11182 0 0 12835 0 0 9907.5 0 0 12028 0 0 11900 0 0 11657 0 0 39761 0 0 8099.8 0 0 9230.9 0 0 7771.1 0 0 11374 0 0 12704 0 0 10088 0 0 12272 0 0 13057 0 0 11518 0 0 37715 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 35722000 35722000 0 0 NaN 389 225 280 280 3704 3939 4199 4665;4666 4199 4665 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19723 4199 4665 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19723 4199 4665 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19723 O94913 705 O94913 O94913 Pre-mRNA cleavage complex 2 protein Pcf11 PCF11 sp|O94913|PCF11_HUMAN Pre-mRNA cleavage complex 2 protein Pcf11 OS=Homo sapiens GN=PCF11 PE=1 SV=3 1 59.2813 0.0332437 59.281 36.407 59.281 1 S RQLFQYQEGVREEQRSPFNDRFPLKRPRYED X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPXXXXXX EEQRS(1)PFNDRFPLK EEQRS(59.28)PFNDRFPLK 5 3 0.97604 11082 0 0 15026 0 0 11609 0 0 14351 0 0 11530 0 0 10368 0 0 9360.4 0 0 12366 0 0 17218 0 0 26254 0 0 10488 0 0 14191 0 0 11654 0 0 14712 0 0 11682 0 0 10645 0 0 9847.5 0 0 13118 0 0 16656 0 0 25008 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11632000 11632000 0 0 NaN 390 227 705 705 933 987 1071 1183 1071 1183 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15643 1071 1183 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15643 1071 1183 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15643 O94913 777 O94913 O94913 Pre-mRNA cleavage complex 2 protein Pcf11 PCF11 sp|O94913|PCF11_HUMAN Pre-mRNA cleavage complex 2 protein Pcf11 OS=Homo sapiens GN=PCF11 PE=1 SV=3 1 79.6515 0.00718695 79.652 60.52 79.652 1 S RDGPTKMIFEGPNKLSPRIDGPPTPASLRFD X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX MIFEGPNKLS(1)PR MIFEGPNKLS(79.65)PR 10 3 0.33392 16753 0 0 24097 0 0 16256 0 0 24056 0 0 16191 0 0 15253 0 0 15935 0 0 18928 0 0 25041 0 0 13802 0 0 15850 0 0 22764 0 0 16396 0 0 24561 0 0 16439 0 0 15754 0 0 16482 0 0 19259 0 0 24321 0 0 13435 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 36989000 36989000 0 0 NaN 391 227 777 777 2707 2871;2872 3080;3081 3427;3428 3081 3428 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18118 3081 3428 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18118 3081 3428 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18118 O94913 511 O94913 O94913 Pre-mRNA cleavage complex 2 protein Pcf11 PCF11 sp|O94913|PCF11_HUMAN Pre-mRNA cleavage complex 2 protein Pcf11 OS=Homo sapiens GN=PCF11 PE=1 SV=3 0.990038 22.206 5.34151E-06 153.66 118.84 153.66 1 S KRRDRRSPKRRQRSMSPTSTPKAGKIRQSGA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX S(0.006)MS(0.99)PT(0.001)S(0.002)T(0.001)PK S(-22.21)MS(22.21)PT(-29)S(-27.33)T(-30.28)PK 3 2 -0.10914 34151 0 0 42232 0 0 35422 0 0 41562 0 0 47209 0 0 38721 0 0 45977 0 0 39274 0 0 45448 0 0 7164 0 0 32320 0 0 39892 0 0 35737 0 0 42670 0 0 47194 0 0 38959 0 0 46845 0 0 39589 0 0 44866 0 0 7654.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 48816000 48816000 0 0 NaN 392 227 511 511 4037 4306 4594 5102 4594 5102 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9926 4594 5102 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9926 4594 5102 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9926 O94913 487 O94913 O94913 Pre-mRNA cleavage complex 2 protein Pcf11 PCF11 sp|O94913|PCF11_HUMAN Pre-mRNA cleavage complex 2 protein Pcf11 OS=Homo sapiens GN=PCF11 PE=1 SV=3 0.777769 5.43646 0.00713158 81.594 51.536 81.594 2 S GRSSTRKRSRSRSPKSRSPIIHSPKRRDRRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPXXXXXX S(0.778)RS(0.223)PIIHS(0.999)PK S(5.44)RS(-5.44)PIIHS(30.34)PK 1 3 1.0507 0 18659 0 0 23504 0 0 19102 0 0 22947 0 0 22571 0 0 20083 0 0 24056 0 0 24898 0 0 25230 0 0 3167 0 0 17658 0 0 22200 0 0 19254 0 0 23549 0 0 22723 0 0 20324 0 0 24448 0 0 24884 0 0 24844 0 0 3558.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 129480000 0 129480000 0 NaN 393 227 487 487 4289 4573 4873 5409 4873 5409 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8990 4873 5409 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8990 4873 5409 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8990 O94913 494 O94913 O94913 Pre-mRNA cleavage complex 2 protein Pcf11 PCF11 sp|O94913|PCF11_HUMAN Pre-mRNA cleavage complex 2 protein Pcf11 OS=Homo sapiens GN=PCF11 PE=1 SV=3 0.999282 30.3425 0.00713158 81.594 51.536 81.594 2 S RSRSRSPKSRSPIIHSPKRRDRRSPKRRQRS X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX S(0.778)RS(0.223)PIIHS(0.999)PK S(5.44)RS(-5.44)PIIHS(30.34)PK 8 3 1.0507 0 18659 0 0 23504 0 0 19102 0 0 22947 0 0 22571 0 0 20083 0 0 24056 0 0 24898 0 0 25230 0 0 3167 0 0 17658 0 0 22200 0 0 19254 0 0 23549 0 0 22723 0 0 20324 0 0 24448 0 0 24884 0 0 24844 0 0 3558.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 129480000 0 129480000 0 NaN 394 227 494 494 4289 4573 4873 5409 4873 5409 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8990 4873 5409 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8990 4873 5409 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8990 O94915 2332 O94915 O94915 Protein furry homolog-like FRYL sp|O94915|FRYL_HUMAN Protein furry homolog-like OS=Homo sapiens GN=FRYL PE=1 SV=2 0.622063 7.43533 7.05355E-23 252.55 227.23 252.55 1 S GRNGKPKVIAVTRSTSSTSSGSNSNALVPVS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.112)T(0.112)S(0.622)S(0.112)T(0.021)S(0.021)SGSNSNALVPVSWK S(-7.44)T(-7.44)S(7.44)S(-7.44)T(-14.82)S(-14.82)S(-38.29)GS(-98.98)NS(-150.63)NALVPVS(-236.32)WK 3 3 -0.72255 6866.6 0 0 7481.6 0 0 7174.3 0 0 6877.5 0 0 12434 0 0 6818.4 0 0 13237 0 0 9424.5 0 0 7563.8 0 0 19993 0 0 6498.7 0 0 7064.2 0 0 7272.3 0 0 7097.5 0 0 12313 0 0 6907.4 0 0 13280 0 0 9954.9 0 0 7703.8 0 0 19044 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21692000 21692000 0 0 NaN 395 228 2332 2332 4531 4830 5145 5713 5145 5713 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19488 5145 5713 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19488 5145 5713 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19488 O94915 1978 O94915 O94915 Protein furry homolog-like FRYL sp|O94915|FRYL_HUMAN Protein furry homolog-like OS=Homo sapiens GN=FRYL PE=1 SV=2 0.979798 17.4571 0.000655803 112.7 47.425 109.11 1 S MDGRINHSSSLARTRSLSSLREKGMYDVQST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX T(0.003)RS(0.98)LS(0.018)SLR T(-25.8)RS(17.46)LS(-17.46)S(-45.05)LR 3 2 -0.94686 108940 0 0 84565 0 0 114940 0 0 88061 0 0 93058 0 0 113650 0 0 110840 0 0 104030 0 0 88744 0 0 13630 0 0 103100 0 0 79905 0 0 115160 0 0 90616 0 0 95958 0 0 112680 0 0 111360 0 0 105130 0 0 88500 0 0 15242 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 96924000 96924000 0 0 NaN 396 228 1978 1978 4901 5226 5567;5568 6188;6189;6190 5568 6189 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9300 5567 6188 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9281 5567 6188 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9281 O94964 1017 O94964 O94964 Protein SOGA1;N-terminal form;C-terminal 80 kDa form SOGA1 sp|O94964|SOGA1_HUMAN Protein SOGA1 OS=Homo sapiens GN=SOGA1 PE=1 SV=2 0.999335 32.6865 0.00730175 88.056 53.968 88.056 1 S RSYTAPDKTGIRVYYSPPVARRLGVPVVHDK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX VYY(0.001)S(0.999)PPVAR VY(-38.96)Y(-32.69)S(32.69)PPVAR 4 2 -0.40281 19666 0 0 30286 0 0 19225 0 0 24307 0 0 15233 0 0 18056 0 0 16777 0 0 21754 0 0 28908 0 0 7029.1 0 0 18608 0 0 28576 0 0 19338 0 0 25222 0 0 15727 0 0 18437 0 0 17336 0 0 21889 0 0 28009 0 0 7122.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23805000 23805000 0 0 NaN 397 229 1017 1017 5329 5677 6053 6727 6053 6727 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14332 6053 6727 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14332 6053 6727 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14332 O94979 799 O94979 O94979 Protein transport protein Sec31A SEC31A sp|O94979|SC31A_HUMAN Protein transport protein Sec31A OS=Homo sapiens GN=SEC31A PE=1 SV=3 0.656555 2.81414 0.0142693 63.578 37.143 63.578 1 S DRLCRAQGEPVAGHESPKIPYEKQQLPKGRP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPXXXXXXXX AQGEPVAGHES(0.657)PKIPY(0.343)EK AQGEPVAGHES(2.81)PKIPY(-2.81)EK 11 3 0.071032 27538 0 0 34559 0 0 30733 0 0 33815 0 0 29206 0 0 31275 0 0 33215 0 0 34883 0 0 40027 0 0 23212 0 0 26070 0 0 32643 0 0 30752 0 0 34725 0 0 29791 0 0 31550 0 0 33804 0 0 35549 0 0 39206 0 0 22664 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 59542000 59542000 0 0 NaN 398 230 799 799 392 419 454 503 454 503 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12856 454 503 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12856 454 503 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12856 O94979 1163 O94979 O94979 Protein transport protein Sec31A SEC31A sp|O94979|SC31A_HUMAN Protein transport protein Sec31A OS=Homo sapiens GN=SEC31A PE=1 SV=3 0.641294 3.34389 1.06738E-10 180.56 153.76 180.56 1 S KRLEFLYDKLREQTLSPTITSGLHNIARSIE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPXXX EQT(0.001)LS(0.641)PT(0.297)IT(0.059)S(0.002)GLHNIAR EQT(-29.84)LS(3.34)PT(-3.34)IT(-10.38)S(-24.33)GLHNIAR 5 3 -0.19914 6243 0 0 7714.6 0 0 5802.1 0 0 7706.1 0 0 5455.9 0 0 6085.8 0 0 6684.5 0 0 7645.8 0 0 10126 0 0 8736.4 0 0 5905.9 0 0 7287.7 0 0 5865.8 0 0 7886.9 0 0 5577.7 0 0 6208.4 0 0 6839.4 0 0 7872.1 0 0 9844.9 0 0 8403.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 33070000 33070000 0 0 NaN 399 230 1163 1163 1108 1167 1256 1380 1256 1380 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17181 1256 1380 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17181 1256 1380 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17181 O95071 1549 O95071 O95071 E3 ubiquitin-protein ligase UBR5 UBR5 sp|O95071|UBR5_HUMAN E3 ubiquitin-protein ligase UBR5 OS=Homo sapiens GN=UBR5 PE=1 SV=2 0.998583 28.4795 7.1606E-07 173.37 126.08 173.37 1 S SQSSYIIRNPQQRRISQSQPVRGRDEEQDDI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX RIS(0.999)QS(0.001)QPVR RIS(28.48)QS(-28.48)QPVR 3 2 0.24502 35462 0 0 40080 0 0 35026 0 0 36804 0 0 56124 0 0 33292 0 0 49346 0 0 43521 0 0 42570 0 0 6023.1 0 0 33554 0 0 37844 0 0 35540 0 0 37932 0 0 55607 0 0 33666 0 0 50370 0 0 43440 0 0 42291 0 0 6678.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 94235000 94235000 0 0 NaN 400 231 1549 1549 3283 3483 3720 4133 3720 4133 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6752 3720 4133 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6752 3720 4133 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6752 O95104 154 O95104 O95104 Splicing factor, arginine/serine-rich 15 SCAF4 sp|O95104|SFR15_HUMAN Splicing factor, arginine/serine-rich 15 OS=Homo sapiens GN=SCAF4 PE=1 SV=3 0.999809 37.1985 1.24733E-12 187.89 176.17 187.89 1 S SNAAPVAENVTNNEGSPPPPVKVSSEPPTQA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPXXXXXXXXX IEIIQPLLDMAAGTSNAAPVAENVTNNEGS(1)PPPPVK IEIIQPLLDMAAGT(-97.52)S(-90.62)NAAPVAENVT(-37.2)NNEGS(37.2)PPPPVK 30 4 -0.2556 24170 0 0 27305 0 0 21031 0 0 26293 0 0 37715 0 0 23761 0 0 39101 0 0 27703 0 0 30673 0 0 142040 0 0 22859 0 0 25788 0 0 21565 0 0 27017 0 0 37300 0 0 24247 0 0 39504 0 0 31915 0 0 30622 0 0 134390 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 316260000 316260000 0 0 NaN 401 232 154 154 1817 1917;1918 2071;2072 2321;2322 2072 2322 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24136 2072 2322 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24136 2072 2322 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24136 O95104 1004 O95104 O95104 Splicing factor, arginine/serine-rich 15 SCAF4 sp|O95104|SFR15_HUMAN Splicing factor, arginine/serine-rich 15 OS=Homo sapiens GN=SCAF4 PE=1 SV=3 1 143.747 5.58792E-07 143.75 92.717 143.75 1 S QQFNSGRDQERFGRRSFGNRVENDRERYGNR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(1)FGNRVENDRER S(143.75)FGNRVENDRER 1 3 -0.071879 22575 0 0 29942 0 0 24845 0 0 32966 0 0 38536 0 0 24660 0 0 41609 0 0 33038 0 0 32489 0 0 6558.3 0 0 21370 0 0 28302 0 0 25060 0 0 33530 0 0 38333 0 0 25206 0 0 41957 0 0 33012 0 0 32444 0 0 6940.1 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 59311000 59311000 0 0 NaN 402 232 1004 1004 3743;3744 3983;3984 4247;4248 4722;4723 4248 4723 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7252 4248 4723 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7252 4248 4723 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7252 O95155 105 O95155 O95155 Ubiquitin conjugation factor E4 B UBE4B sp|O95155|UBE4B_HUMAN Ubiquitin conjugation factor E4 B OS=Homo sapiens GN=UBE4B PE=1 SV=1 0.588463 1.55311 0.000109884 114.69 98.803 114.69 1 S SNSLETQSQSLSRSQSMDIDGVSCEKSMSQV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX S(0.412)QS(0.588)MDIDGVSCEK S(-1.55)QS(1.55)MDIDGVS(-67.22)CEK 3 3 -1.2109 12107 0 0 16056 0 0 13324 0 0 16207 0 0 10594 0 0 13750 0 0 11680 0 0 15360 0 0 18892 0 0 7877.1 0 0 11461 0 0 15169 0 0 13315 0 0 16592 0 0 10935 0 0 13927 0 0 12034 0 0 15582 0 0 18335 0 0 7772.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15258000 15258000 0 0 NaN 403 233 105 105 4243 4521 4818 5348 4818 5348 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14132 4818 5348 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14132 4818 5348 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14132 O95197 30 O95197 O95197 Reticulon-3 RTN3 sp|O95197|RTN3_HUMAN Reticulon-3 OS=Homo sapiens GN=RTN3 PE=1 SV=2 0.208533 3.75056 5.68348E-06 46.817 32.409 46.817 S SSSFGAEPSAPGGGGSPGACPALGTKSCSSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPXXXXX AEPS(0.088)AAT(0.088)QS(0.088)HS(0.088)IS(0.088)S(0.088)S(0.088)S(0.088)FGAEPS(0.088)APGGGGS(0.209)PGACPALGTK AEPS(-3.75)AAT(-3.75)QS(-3.75)HS(-3.75)IS(-3.75)S(-3.75)S(-3.75)S(-3.75)FGAEPS(-3.75)APGGGGS(3.75)PGACPALGT(-32.12)K 29 4 -0.75506 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 404 234 30 30 150 156 169 191 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16259 169 191 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16259 169 191 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16259 O95218 153 O95218 O95218 Zinc finger Ran-binding domain-containing protein 2 ZRANB2 sp|O95218|ZRAB2_HUMAN Zinc finger Ran-binding domain-containing protein 2 OS=Homo sapiens GN=ZRANB2 PE=1 SV=2 1 136.948 2.17087E-31 290.25 251.38 290.25 1 S AVGPASILKEVEDKESEGEEEDEDEDLSKYK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPPXX EVEDKES(1)EGEEEDEDEDLSK EVEDKES(136.95)EGEEEDEDEDLS(-136.95)K 7 3 0.038247 22132 0 0 25292 0 0 24973 0 0 24631 0 0 25508 0 0 24848 0 0 25336 0 0 24309 0 0 28398 0 0 8256 0 0 20953 0 0 23889 0 0 24989 0 0 25334 0 0 25855 0 0 24905 0 0 25882 0 0 24653 0 0 27890 0 0 8336.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30363000 30363000 0 0 NaN 405 235 153 153 1204 1267 1366 1514 1366 1514 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12451 1366 1514 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12451 1366 1514 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12451 O95218 188 O95218 O95218 Zinc finger Ran-binding domain-containing protein 2 ZRANB2 sp|O95218|ZRAB2_HUMAN Zinc finger Ran-binding domain-containing protein 2 OS=Homo sapiens GN=ZRANB2 PE=1 SV=2 0.999997 55.7618 1.86787E-32 324.17 290.98 324.17 1 S EDEDDADLSKYNLDASEEEDSNKKKSNRRSR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPXXXXXX YNLDAS(1)EEEDSNK Y(-175.97)NLDAS(55.76)EEEDS(-55.76)NK 6 2 0.19497 131050 0 0 128820 0 0 140290 0 0 122180 0 0 118950 0 0 144060 0 0 138960 0 0 142350 0 0 136880 0 0 105260 0 0 124040 0 0 121650 0 0 140510 0 0 126210 0 0 122250 0 0 143600 0 0 140430 0 0 146030 0 0 135150 0 0 102410 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 238490000 238490000 0 0 NaN 406 235 188 188 5403;5404;5405 5755;5756;5757 6142;6143;6144 6829;6830;6831 6142 6829 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12839 6142 6829 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12839 6142 6829 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12839 O95235 532 O95235 O95235 Kinesin-like protein KIF20A KIF20A sp|O95235|KI20A_HUMAN Kinesin-like protein KIF20A OS=Homo sapiens GN=KIF20A PE=1 SV=1 0.999854 38.3678 6.57514E-08 169.92 134.26 169.92 1 S FPSLHSFIKEHSLQVSPSLEKGAKADTGLDD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX EHSLQVS(1)PSLEK EHS(-76.5)LQVS(38.37)PS(-38.37)LEK 7 3 0.70005 13940 0 0 19372 0 0 13292 0 0 18617 0 0 12784 0 0 14977 0 0 13934 0 0 17126 0 0 21946 0 0 11748 0 0 13188 0 0 18295 0 0 13417 0 0 19103 0 0 13027 0 0 15223 0 0 14348 0 0 17449 0 0 21314 0 0 11458 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20422000 20422000 0 0 NaN 407 236 532 532 989 1044 1130 1247 1130 1247 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13366 1130 1247 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13366 1130 1247 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13366 O95243 387 O95243 O95243 Methyl-CpG-binding domain protein 4 MBD4 sp|O95243|MBD4_HUMAN Methyl-CpG-binding domain protein 4 OS=Homo sapiens GN=MBD4 PE=1 SV=1 0.827662 6.81567 0.0288543 55.864 35.201 55.864 1 S HTDILKRGSEMDNNCSPTRKDFTGEKIFQED X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPXXXXXXXXXXX GSEMDNNCS(0.828)PT(0.172)RK GS(-43.48)EMDNNCS(6.82)PT(-6.82)RK 9 3 0.24506 19421 0 0 12740 0 0 17382 0 0 14638 0 0 11636 0 0 19695 0 0 9489 0 0 14897 0 0 16564 0 0 2900.9 0 0 18370 0 0 12045 0 0 17545 0 0 14996 0 0 12124 0 0 19461 0 0 9955.8 0 0 15216 0 0 16043 0 0 3076.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19289000 19289000 0 0 NaN 408 238 387 387 1602 1688 1824 2027 1824 2027 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7166 1824 2027 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7166 1824 2027 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7166 O95243 318 O95243 O95243 Methyl-CpG-binding domain protein 4 MBD4 sp|O95243|MBD4_HUMAN Methyl-CpG-binding domain protein 4 OS=Homo sapiens GN=MBD4 PE=1 SV=1 0.731834 7.37121 1.27032E-10 180.56 153.23 180.56 1 S TSEENSLVKKKERSLSSGSNFCSEQKTSGII X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX S(0.134)LS(0.732)S(0.134)GSNFCSEQK S(-7.37)LS(7.37)S(-7.37)GS(-41.56)NFCS(-151.59)EQK 3 3 -1.6445 23412 0 0 16663 0 0 26931 0 0 15947 0 0 13509 0 0 25886 0 0 12689 0 0 18302 0 0 14498 0 0 7701.5 0 0 22167 0 0 15737 0 0 26750 0 0 16578 0 0 14492 0 0 25423 0 0 13006 0 0 18884 0 0 14229 0 0 7675.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14583000 14583000 0 0 NaN 409 238 318 318 4001 4266 4554 5062 4554 5062 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12865 4554 5062 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12865 4554 5062 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12865 O95251 57 O95251 O95251 Histone acetyltransferase KAT7 KAT7 sp|O95251|KAT7_HUMAN Histone acetyltransferase KAT7 OS=Homo sapiens GN=KAT7 PE=1 SV=1 0.992537 21.2449 8.4672E-05 126.32 75.055 126.32 1 S VTRSSARLSQSSQDSSPVRNLQSFGTEEPAY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPXXXXXXXXXXXX LSQSSQDS(0.007)S(0.993)PVR LS(-101.11)QS(-61.15)S(-49.76)QDS(-21.24)S(21.24)PVR 9 2 -0.15338 19201 0 0 19977 0 0 22084 0 0 19161 0 0 11999 0 0 22127 0 0 12821 0 0 19232 0 0 21469 0 0 4764.4 0 0 18180 0 0 18867 0 0 21949 0 0 19772 0 0 12792 0 0 22019 0 0 13248 0 0 19547 0 0 20816 0 0 4931.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 69460000 69460000 0 0 NaN 410 239 57 57 2584 2728 2926 3260 2926 3260 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8120 2926 3260 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8120 2926 3260 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8120 O95251 102 O95251 O95251 Histone acetyltransferase KAT7 KAT7 sp|O95251|KAT7_HUMAN Histone acetyltransferase KAT7 OS=Homo sapiens GN=KAT7 PE=1 SV=1 0.935869 13.9388 1.65978E-11 211.45 183.4 211.45 1 S VTPKKYPLRQTRSSGSETEQVVDFSDRETKN X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPXXXX S(0.011)S(0.038)GS(0.936)ET(0.015)EQVVDFSDR S(-19.22)S(-13.94)GS(13.94)ET(-17.91)EQVVDFS(-92.12)DR 4 2 -2.7269 10562 0 0 7302.4 0 0 9704.6 0 0 7580.2 0 0 7361.7 0 0 10588 0 0 8573.9 0 0 10118 0 0 8614.5 0 0 11232 0 0 9991.5 0 0 6899.9 0 0 9794.9 0 0 7814.5 0 0 7626.1 0 0 10493 0 0 8670.4 0 0 10505 0 0 8498.2 0 0 10811 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10907000 10907000 0 0 NaN 411 239 102 102 4354 4640 4943 5487 4943 5487 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14377 4943 5487 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14377 4943 5487 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14377 O95292 158 O95292 O95292 Vesicle-associated membrane protein-associated protein B/C VAPB sp|O95292|VAPB_HUMAN Vesicle-associated membrane protein-associated protein B/C OS=Homo sapiens GN=VAPB PE=1 SV=3 0.787033 7.17787 0.0475347 49.049 26.516 49.049 1 S TTASKTETPIVSKSLSSSLDDTEVKKVMEEC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX S(0.035)LS(0.787)S(0.151)S(0.028)LDDTEVKK S(-13.58)LS(7.18)S(-7.18)S(-14.55)LDDT(-39.47)EVKK 3 3 1.4276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 412 240 158 158 4003 4268 4556 5064 4556 5064 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15810 4556 5064 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15810 4556 5064 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15810 O95295 133 O95295 O95295 SNARE-associated protein Snapin SNAPIN sp|O95295|SNAPN_HUMAN SNARE-associated protein Snapin OS=Homo sapiens GN=SNAPIN PE=1 SV=1 0.999967 44.8233 0.000160086 102.89 88.209 102.89 1 S ARRRAMLDSGIYPPGSPGK____________ X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX AMLDSGIYPPGS(1)PGK AMLDS(-64.67)GIY(-44.82)PPGS(44.82)PGK 12 3 1.3822 17496 0 0 19095 0 0 19874 0 0 16916 0 0 17653 0 0 19874 0 0 19414 0 0 20171 0 0 18892 0 0 11838 0 0 16564 0 0 18026 0 0 19851 0 0 17549 0 0 18070 0 0 19815 0 0 19663 0 0 20578 0 0 18662 0 0 11613 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 36654000 36654000 0 0 NaN 413 241 133 133 335 358;359 386;387 427;428 387 428 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18524 387 428 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18524 387 428 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18524 O95365 526 O95365 O95365 Zinc finger and BTB domain-containing protein 7A ZBTB7A sp|O95365|ZBT7A_HUMAN Zinc finger and BTB domain-containing protein 7A OS=Homo sapiens GN=ZBTB7A PE=1 SV=1 0.706787 3.82107 2.73725E-12 202.18 173.76 202.18 1 S SPGATATPGAPAQPSSPDARRNGQEKHFKDE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX GGAPDPSPGATATPGAPAQPS(0.293)S(0.707)PDAR GGAPDPS(-129.05)PGAT(-90.35)AT(-59.46)PGAPAQPS(-3.82)S(3.82)PDAR 22 3 0.067948 9282.6 0 0 6493.8 0 0 8802.4 0 0 6354.3 0 0 6445.2 0 0 9274.7 0 0 6472.8 0 0 7707.4 0 0 6946.7 0 0 4307.6 0 0 8781.9 0 0 6133.7 0 0 8862.4 0 0 6579.8 0 0 6680.6 0 0 9154.6 0 0 6600.4 0 0 7921.6 0 0 6834.2 0 0 4234.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 102010000 102010000 0 0 NaN 414 242 526 526 1427 1504 1613 1783 1613 1783 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9738 1613 1783 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9738 1613 1783 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9738 O95391 215 O95391 O95391 Pre-mRNA-splicing factor SLU7 SLU7 sp|O95391|SLU7_HUMAN Pre-mRNA-splicing factor SLU7 OS=Homo sapiens GN=SLU7 PE=1 SV=2 1 121.711 0.00018951 121.71 82.445 121.71 1 S LQEELASGKLVEQANSPKHQWGEEEPNSQME X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX LVEQANS(1)PK LVEQANS(121.71)PK 7 3 -0.3562 19201 0 0 13722 0 0 19021 0 0 13255 0 0 9188.9 0 0 17910 0 0 8490.3 0 0 13372 0 0 12918 0 0 1857.7 0 0 18169 0 0 12960 0 0 19041 0 0 13713 0 0 9899.7 0 0 17691 0 0 8797.2 0 0 13645 0 0 12558 0 0 2058.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 52011000 52011000 0 0 NaN 415 244 215 215 2645 2792 2993 3331 2993 3331 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11850 2993 3331 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11850 2993 3331 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11850 O95394 64 O95394 O95394 Phosphoacetylglucosamine mutase PGM3 sp|O95394|AGM1_HUMAN Phosphoacetylglucosamine mutase OS=Homo sapiens GN=PGM3 PE=1 SV=1 0.998825 29.2941 2.79739E-23 273.96 246.87 188.07 1 S RSKQTKSTIGVMVTASHNPEEDNGVKLVDPL X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPXXXXX STIGVMVT(0.001)AS(0.999)HNPEEDNGVK S(-107.36)T(-107.36)IGVMVT(-29.29)AS(29.29)HNPEEDNGVK 10 3 -0.69149 57495 0 0 44553 0 0 57707 0 0 46130 0 0 45980 0 0 56903 0 0 47891 0 0 57310 0 0 48104 0 0 153850 0 0 54406 0 0 42097 0 0 57956 0 0 47442 0 0 47380 0 0 56851 0 0 48663 0 0 62106 0 0 47456 0 0 146190 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 165480000 165480000 0 0 NaN 416 245 64 64 4510 4803;4804 5116;5117 5681;5682;5683 5116 5681 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13304 5117 5682 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15296 5117 5682 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15296 O95396 47 O95396 O95396 Adenylyltransferase and sulfurtransferase MOCS3;Molybdopterin-synthase adenylyltransferase;Molybdopterin-synthase sulfurtransferase MOCS3 sp|O95396|MOCS3_HUMAN Adenylyltransferase and sulfurtransferase MOCS3 OS=Homo sapiens GN=MOCS3 PE=1 SV=1 1 67.1532 0.0106918 67.153 42.299 67.153 1 S LLAEQEPQPERLVPVSPLPPKAALSRDEILR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX LVPVS(1)PLPPK LVPVS(67.15)PLPPK 5 3 0.059445 3211 0 0 3256.9 0 0 3427.6 0 0 3048.1 0 0 2639.9 0 0 3141.8 0 0 3228.3 0 0 3570.9 0 0 3519.5 0 0 2670.9 0 0 3039.3 0 0 3075.5 0 0 3430.4 0 0 3143.9 0 0 2734.1 0 0 3155.4 0 0 3265.9 0 0 3645.7 0 0 3460.4 0 0 2597.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6128200 6128200 0 0 NaN 417 246 47 47 2652 2799 3000 3338 3000 3338 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19888 3000 3338 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19888 3000 3338 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19888 O95400 195 O95400 O95400 CD2 antigen cytoplasmic tail-binding protein 2 CD2BP2 sp|O95400|CD2B2_HUMAN CD2 antigen cytoplasmic tail-binding protein 2 OS=Homo sapiens GN=CD2BP2 PE=1 SV=1 0.987978 19.1476 5.56721E-05 128.63 102.08 128.63 1 S ARGGGKGRKGPGQPSSPQRLDRLSGLADQMV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPXXXXXXXXX KGPGQPS(0.012)S(0.988)PQR KGPGQPS(-19.15)S(19.15)PQR 8 3 -0.17384 47290 0 0 58947 0 0 48276 0 0 64507 0 0 48506 0 0 46689 0 0 54582 0 0 56576 0 0 64929 0 0 6380 0 0 44752 0 0 55716 0 0 48569 0 0 65608 0 0 49306 0 0 47730 0 0 55551 0 0 56559 0 0 63627 0 0 7317 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 341320000 341320000 0 0 NaN 418 247 195 195 2070;2071 2190;2191 2358;2359 2628;2629 2358 2628 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5995 2358 2628 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5995 2358 2628 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5995 O95402 535 O95402 O95402 Mediator of RNA polymerase II transcription subunit 26 MED26 sp|O95402|MED26_HUMAN Mediator of RNA polymerase II transcription subunit 26 OS=Homo sapiens GN=MED26 PE=1 SV=2 0.992154 21.3085 0.0090173 77.19 52.652 77.19 1 S STRQGARQLHVLVPQSPPTDLPGLTREVTQD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPXXXXX QLHVLVPQS(0.992)PPT(0.007)DLPGLT(0.001)R QLHVLVPQS(21.31)PPT(-21.31)DLPGLT(-32.93)R 9 3 0.72 7249.2 0 0 6625.8 0 0 6825.9 0 0 5545.8 0 0 6005.6 0 0 6883 0 0 5408.9 0 0 7215.8 0 0 6306.3 0 0 16401 0 0 6858 0 0 6253 0 0 6886.5 0 0 5781.7 0 0 6135.4 0 0 6874.5 0 0 5559 0 0 7719.2 0 0 6184.3 0 0 15610 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9866000 9866000 0 0 NaN 419 248 535 535 3066 3252 3480 3856 3480 3856 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20469 3480 3856 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20469 3480 3856 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20469 O95453 619 O95453 O95453 Poly(A)-specific ribonuclease PARN PARN sp|O95453|PARN_HUMAN Poly(A)-specific ribonuclease PARN OS=Homo sapiens GN=PARN PE=1 SV=1 0.999782 36.6756 3.01765E-14 224.03 135 224.03 1 S GRKKAKKLKRMKKELSPAGSISKNSPATLFE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX ELS(1)PAGSISK ELS(36.68)PAGS(-36.68)IS(-55.44)K 3 2 -0.31196 45209 0 0 48472 0 0 43999 0 0 42463 0 0 39967 0 0 39526 0 0 41484 0 0 38528 0 0 48131 0 0 10893 0 0 42775 0 0 45756 0 0 44328 0 0 43919 0 0 40825 0 0 39758 0 0 42336 0 0 39014 0 0 47209 0 0 11149 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 159120000 159120000 0 0 NaN 420 249 619 619 1051 1107 1195 1314 1195 1314 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13861 1195 1314 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13861 1195 1314 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13861 O95453 557 O95453 O95453 Poly(A)-specific ribonuclease PARN PARN sp|O95453|PARN_HUMAN Poly(A)-specific ribonuclease PARN OS=Homo sapiens GN=PARN PE=1 SV=1 0.755256 4.89404 6.05487E-11 196.41 162.49 196.41 1 S QCIPYTLQNHYYRNNSFTAPSTVGKRNLSPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX NNS(0.755)FT(0.245)APSTVGK NNS(4.89)FT(-4.89)APS(-48.33)T(-57.44)VGK 3 2 0.96595 40986 0 0 22117 0 0 40129 0 0 22272 0 0 49691 0 0 39116 0 0 49999 0 0 37518 0 0 19805 0 0 9109.1 0 0 38780 0 0 20894 0 0 40574 0 0 23130 0 0 49838 0 0 38453 0 0 50053 0 0 37970 0 0 20823 0 0 9445.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 48347000 48347000 0 0 NaN 421 249 557 557 2876 3049 3266 3622 3266 3622 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13177 3266 3622 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13177 3266 3622 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13177 O95466 184 O95466 O95466 Formin-like protein 1 FMNL1 sp|O95466|FMNL_HUMAN Formin-like protein 1 OS=Homo sapiens GN=FMNL1 PE=1 SV=3 0.999981 47.204 4.79756E-07 148.26 98.961 148.26 1 S DNGASNSEKNKPLEQSVEDLSKGPPSSVPKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPXXXXXXXXX NKPLEQS(1)VEDLSK NKPLEQS(47.2)VEDLS(-47.2)K 7 3 -0.48974 25587 0 0 12044 0 0 27003 0 0 11812 0 0 21720 0 0 22957 0 0 27204 0 0 21417 0 0 11769 0 0 12061 0 0 24217 0 0 11377 0 0 27055 0 0 12322 0 0 22416 0 0 22517 0 0 27006 0 0 21906 0 0 12267 0 0 11852 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 42578000 42578000 0 0 NaN 422 250 184 184 2838 3008 3222 3577 3222 3577 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14722 3222 3577 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14722 3222 3577 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14722 O95544 64 O95544 O95544 NAD kinase NADK sp|O95544|NADK_HUMAN NAD kinase OS=Homo sapiens GN=NADK PE=1 SV=1 0.999765 36.283 1.6177E-10 183.84 164 183.84 1 S ASPALGSTKEFRRTRSLHGPCPVTTFGPKAC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPXX S(1)LHGPCPVTTFGPK S(36.28)LHGPCPVT(-36.28)T(-71.61)FGPK 1 3 -1.4374 38533 0 0 26870 0 0 41708 0 0 26527 0 0 29859 0 0 45871 0 0 30531 0 0 33533 0 0 29411 0 0 7453.1 0 0 36474 0 0 25382 0 0 41671 0 0 27569 0 0 31009 0 0 44975 0 0 31015 0 0 34339 0 0 29067 0 0 7794 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 79159000 79159000 0 0 NaN 423 251 64 64 3943;4899 4202;5224 4484 4984 4484 4984 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16193 4484 4984 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16193 4484 4984 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16193 O95562 9 O95562 O95562 Vesicle transport protein SFT2B SFT2D2 sp|O95562|SFT2B_HUMAN Vesicle transport protein SFT2B OS=Homo sapiens GN=SFT2D2 PE=1 SV=1 0.991132 20.483 0.00293624 96.469 60.023 96.469 1 S _______MDKLKKVLSGQDTEDRSGLSEVVE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX VLS(0.991)GQDT(0.009)EDR VLS(20.48)GQDT(-20.48)EDR 3 2 0.014325 36214 0 0 25211 0 0 35199 0 0 25891 0 0 16646 0 0 36630 0 0 18890 0 0 29045 0 0 27415 0 0 7762.7 0 0 34264 0 0 23819 0 0 35279 0 0 26715 0 0 18028 0 0 36156 0 0 19354 0 0 29662 0 0 26689 0 0 7981.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21611000 21611000 0 0 NaN 424 252 9 9 5174 5513 5875 6529 5875 6529 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9542 5875 6529 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9542 5875 6529 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9542 O95628 324 O95628 O95628 CCR4-NOT transcription complex subunit 4 CNOT4 sp|O95628|CNOT4_HUMAN CCR4-NOT transcription complex subunit 4 OS=Homo sapiens GN=CNOT4 PE=1 SV=3 0.99996 43.9876 3.7285E-05 118.72 98.881 118.72 1 S SNPVIPISSSNHSARSPFEGAVTESQSLFSD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(1)PFEGAVTESQSLFSDNFR S(43.99)PFEGAVT(-43.99)ES(-89.12)QS(-105.9)LFS(-112.32)DNFR 1 3 0.4316 7081.7 0 0 7621.8 0 0 6695.8 0 0 7170.4 0 0 6300.9 0 0 7437.4 0 0 7383.7 0 0 6778.7 0 0 8742.4 0 0 33771 0 0 6699.7 0 0 7197.5 0 0 6761.7 0 0 7394.2 0 0 6434.1 0 0 7498.3 0 0 7501.2 0 0 7842.7 0 0 8568.5 0 0 31956 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15993000 15993000 0 0 NaN 425 253 324 324 4095 4366 4656 5169 4656 5169 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23505 4656 5169 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23505 4656 5169 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23505 O95639 202 O95639 O95639 Cleavage and polyadenylation specificity factor subunit 4 CPSF4 sp|O95639|CPSF4_HUMAN Cleavage and polyadenylation specificity factor subunit 4 OS=Homo sapiens GN=CPSF4 PE=1 SV=1 0.99924 31.8355 5.36248E-81 444.27 407.18 444.27 1 S PPAKQSNNPPLQRSSSLIQLTSQNSSPNQQR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.001)SS(0.999)LIQLTSQNSSPNQQR S(-31.84)S(-39.78)S(31.84)LIQLT(-114.14)S(-140.06)QNS(-186.14)S(-213.05)PNQQR 3 2 0.93872 3968.2 0 0 5254 0 0 4344.7 0 0 4718.3 0 0 5878.3 0 0 3787.3 0 0 5732.7 0 0 5959.3 0 0 5838 0 0 9166.7 0 0 3756.4 0 0 4960.2 0 0 4371.7 0 0 4862.3 0 0 5872.8 0 0 3882.2 0 0 5845.3 0 0 6169.6 0 0 5755.8 0 0 8769.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11730000 11730000 0 0 NaN 426 254 202 202 4431 4722 5026 5575 5026 5575 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14609 5026 5575 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14609 5026 5575 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14609 O95644 233 O95644 O95644 Nuclear factor of activated T-cells, cytoplasmic 1 NFATC1 sp|O95644|NFAC1_HUMAN Nuclear factor of activated T-cells, cytoplasmic 1 OS=Homo sapiens GN=NFATC1 PE=1 SV=3 0.999998 57.0351 5.09316E-07 147.73 91.689 147.73 1 S EEGFPRGLGACTLLGSPRHSPSTSPRASVTE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX GLGACTLLGS(1)PR GLGACT(-57.04)LLGS(57.04)PR 10 2 -0.0089434 11380 0 0 13075 0 0 12116 0 0 13360 0 0 7727.9 0 0 12220 0 0 7171.9 0 0 12069 0 0 14939 0 0 15845 0 0 10772 0 0 12353 0 0 12103 0 0 13682 0 0 8100.8 0 0 12327 0 0 7539.8 0 0 12590 0 0 14411 0 0 15200 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18322000 18322000 0 0 NaN 427 255 233 233 1496 1574 1699 1880 1699 1880 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17484 1699 1880 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17484 1699 1880 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17484 O95644 261 O95644 O95644 Nuclear factor of activated T-cells, cytoplasmic 1 NFATC1 sp|O95644|NFAC1_HUMAN Nuclear factor of activated T-cells, cytoplasmic 1 OS=Homo sapiens GN=NFATC1 PE=1 SV=3 0.997582 29.1647 0.0103298 67.964 38.156 67.964 1 S VTEESWLGARSSRPASPCNKRKYSLNGRQPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX S(0.001)S(0.001)RPAS(0.998)PCNK S(-29.16)S(-29.16)RPAS(29.16)PCNK 6 3 0.78426 9070.5 0 0 6973.1 0 0 10200 0 0 6812.1 0 0 5462.4 0 0 9475.5 0 0 6850.5 0 0 8497.7 0 0 7686 0 0 2908.3 0 0 8587.2 0 0 6586.3 0 0 10150 0 0 7047.1 0 0 5843.4 0 0 9372.1 0 0 6929.4 0 0 8649.3 0 0 7548.3 0 0 2935.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11297000 11297000 0 0 NaN 428 255 261 261 4409 4697 5001 5548 5001 5548 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5864 5001 5548 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5864 5001 5548 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5864 O95685 74 O95685 O95685 Protein phosphatase 1 regulatory subunit 3D PPP1R3D sp|O95685|PPR3D_HUMAN Protein phosphatase 1 regulatory subunit 3D OS=Homo sapiens GN=PPP1R3D PE=1 SV=1 0.997423 23.4473 0.0104903 63.944 44.302 63.944 2 S GCDPRLRPIILRRARSLPSSPERRQKAAGAP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX S(0.997)LPS(0.573)S(0.43)PERR S(23.45)LPS(1.25)S(-1.25)PERR 1 2 0.22179 0 29952 0 0 24030 0 0 31661 0 0 21814 0 0 24815 0 0 34129 0 0 10737 0 0 28848 0 0 26436 0 0 8209 0 0 28349 0 0 22688 0 0 31672 0 0 22731 0 0 25403 0 0 33609 0 0 10949 0 0 29389 0 0 25418 0 0 8397.4 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 1 0 0 2 0 0 2 0 0 2 0 40207000 0 40207000 0 NaN 429 256 74 74 425;3966 454;4225 489;4508 545;5010 4508 5010 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7978 4508 5010 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7978 4508 5010 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7978 O95685 77 O95685 O95685 Protein phosphatase 1 regulatory subunit 3D PPP1R3D sp|O95685|PPR3D_HUMAN Protein phosphatase 1 regulatory subunit 3D OS=Homo sapiens GN=PPP1R3D PE=1 SV=1 0.819256 6.51589 0.0104903 63.944 44.302 41.386 2 S PRLRPIILRRARSLPSSPERRQKAAGAPGAA X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX ARS(0.991)LPS(0.819)S(0.19)PERR ARS(19.57)LPS(6.52)S(-6.52)PERR 6 3 3.0619 0 29952 0 0 24030 0 0 31661 0 0 21814 0 0 24815 0 0 34129 0 0 10737 0 0 28848 0 0 26436 0 0 8209 0 0 28349 0 0 22688 0 0 31672 0 0 22731 0 0 25403 0 0 33609 0 0 10949 0 0 29389 0 0 25418 0 0 8397.4 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 1 0 0 2 0 0 2 0 0 2 0 40207000 0 40207000 0 NaN 430 256 77 77 425;3966 454;4225 489;4508 545;5010 489 545 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6432 4508 5010 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7978 4508 5010 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7978 O95696 131 O95696 O95696 Bromodomain-containing protein 1 BRD1 sp|O95696|BRD1_HUMAN Bromodomain-containing protein 1 OS=Homo sapiens GN=BRD1 PE=1 SV=1 0.650553 2.69999 0.0134573 76.332 55.124 76.332 1 S ALPEPKVRIVEYSPPSAPRRPPVYYKFIEKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX IVEYS(0.349)PPS(0.651)APR IVEY(-39.18)S(-2.7)PPS(2.7)APR 8 2 -0.80352 29695 0 0 32631 0 0 29250 0 0 34706 0 0 31604 0 0 33303 0 0 29433 0 0 31006 0 0 34912 0 0 21369 0 0 28098 0 0 30837 0 0 29504 0 0 35486 0 0 31907 0 0 33455 0 0 30215 0 0 31834 0 0 34215 0 0 20839 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 13000000 13000000 0 0 NaN 431 257 131 131 1976 2089 2253 2515;2516 2253 2515 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15056 2253 2515 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15056 2253 2515 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15056 O95747 427 O95747 O95747 Serine/threonine-protein kinase OSR1 OXSR1 sp|O95747|OXSR1_HUMAN Serine/threonine-protein kinase OSR1 OS=Homo sapiens GN=OXSR1 PE=1 SV=1 0.999811 37.2352 3.67608E-07 159.01 146.38 159.01 1 S AEPAKTAQALSSGSGSQETKIPISLVLRLRN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPXXXXXXXXXXX TAQALSSGSGS(1)QETK T(-119.64)AQALS(-90.6)S(-71.35)GS(-37.24)GS(37.24)QET(-63.59)K 11 3 -0.7817 14361 0 0 16213 0 0 14442 0 0 12933 0 0 21224 0 0 14563 0 0 21078 0 0 17708 0 0 15149 0 0 9637.4 0 0 13589 0 0 15297 0 0 14621 0 0 13506 0 0 21131 0 0 14582 0 0 21301 0 0 17931 0 0 15199 0 0 9484.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24418000 24418000 0 0 NaN 432 258 427 427 4621 4929 5250 5831 5250 5831 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9645 5250 5831 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9645 5250 5831 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9645 O95772 193 O95772 O95772 MLN64 N-terminal domain homolog STARD3NL sp|O95772|MENTO_HUMAN MLN64 N-terminal domain homolog OS=Homo sapiens GN=STARD3NL PE=1 SV=1 1 69.0301 0.0169133 69.03 37.187 69.03 1 S QEAEEENRLLIVQDASERAALIPGGLSDGQF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX LLIVQDAS(1)ER LLIVQDAS(69.03)ER 8 2 0.9081 7847 0 0 12579 0 0 8330.6 0 0 10670 0 0 9973.4 0 0 10009 0 0 8745.7 0 0 10431 0 0 11070 0 0 13726 0 0 7427 0 0 11872 0 0 8378.4 0 0 11062 0 0 10009 0 0 10093 0 0 9025 0 0 10860 0 0 10825 0 0 13166 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15463000 15463000 0 0 NaN 433 259 193 193 2437 2575 2769 3092 2769 3092 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18389 2769 3092 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18389 2769 3092 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18389 O95777 48 O95777 O95777 U6 snRNA-associated Sm-like protein LSm8 LSM8 sp|O95777|LSM8_HUMAN U6 snRNA-associated Sm-like protein LSm8 OS=Homo sapiens GN=LSM8 PE=1 SV=3 0.501745 0.901049 3.59983E-05 119.41 97.191 119.41 1 S TINLILDESHERVFSSSQGVEQVVLGLYIVR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP VFS(0.091)S(0.502)S(0.408)QGVEQVVLGLYIVR VFS(-7.44)S(0.9)S(-0.9)QGVEQVVLGLY(-117.92)IVR 4 3 -1.6548 4313.2 0 0 5842.2 0 0 4367.2 0 0 4750.9 0 0 3909.3 0 0 4007.6 0 0 4655.5 0 0 4563.6 0 0 4988.5 0 0 28380 0 0 4081.6 0 0 5512.7 0 0 4390.2 0 0 4932.7 0 0 4005.1 0 0 4110.6 0 0 4712.2 0 0 5411.2 0 0 4908.1 0 0 26829 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24179000 24179000 0 0 NaN 434 260 48 48 5108 5445 5799 6448 5799 6448 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24219 5799 6448 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24219 5799 6448 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24219 O95785 1017 O95785 O95785 Protein Wiz WIZ sp|O95785|WIZ_HUMAN Protein Wiz OS=Homo sapiens GN=WIZ PE=1 SV=2 0.98363 21.1643 0.0330828 50.884 15.239 50.884 1 S PEDKSPQLSLSPRPASPKAQWPQSEDEGPLN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPXXXXXXXXXXXXX S(0.006)PQLS(0.003)LS(0.008)PRPAS(0.984)PK S(-22.01)PQLS(-25.68)LS(-21.16)PRPAS(21.16)PK 12 3 -1.0756 12789 0 0 11998 0 0 13003 0 0 12479 0 0 14144 0 0 13120 0 0 16212 0 0 15445 0 0 12262 0 0 6997.4 0 0 12102 0 0 11337 0 0 13099 0 0 12794 0 0 14312 0 0 13165 0 0 16295 0 0 15613 0 0 12267 0 0 6946.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20484000 20484000 0 0 NaN 435 261 1017 1017 4155 4429 4720 5239 4720 5239 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13658 4720 5239 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13658 4720 5239 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13658 O95785 996 O95785 O95785 Protein Wiz WIZ sp|O95785|WIZ_HUMAN Protein Wiz OS=Homo sapiens GN=WIZ PE=1 SV=2 0.995818 23.7684 4.09673E-05 128.71 102.59 128.71 1 S PSSPLLKKTPLALAGSPTPKNPEDKSPQLSL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX TPLALAGS(0.996)PT(0.004)PK T(-98.16)PLALAGS(23.77)PT(-23.77)PK 8 3 0.92044 4839.4 0 0 7341.3 0 0 7824.5 0 0 6624.8 0 0 6669.9 0 0 5329.3 0 0 6929.7 0 0 7219.7 0 0 6647.3 0 0 3022.3 0 0 4590.5 0 0 6931 0 0 7693.5 0 0 6825.1 0 0 6840.2 0 0 5429.1 0 0 7033.6 0 0 7259.7 0 0 6570.9 0 0 3012.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15958000 15958000 0 0 NaN 436 261 996 996 4828 5153 5492 6110 5492 6110 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16926 5492 6110 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16926 5492 6110 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16926 O95801 51 O95801 O95801 Tetratricopeptide repeat protein 4 TTC4 sp|O95801|TTC4_HUMAN Tetratricopeptide repeat protein 4 OS=Homo sapiens GN=TTC4 PE=1 SV=3 1 109.83 0.00122705 109.83 49.785 109.83 1 S EKEFEKVPLFMSRAPSEIDPRENPDLACLQS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX APS(1)EIDPR APS(109.83)EIDPR 3 2 -0.21717 34934 0 0 33372 0 0 35864 0 0 36599 0 0 34436 0 0 37401 0 0 37500 0 0 34741 0 0 34693 0 0 8224.6 0 0 33060 0 0 31543 0 0 36047 0 0 37395 0 0 35071 0 0 37436 0 0 37947 0 0 35199 0 0 34351 0 0 8548.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 53189000 53189000 0 0 NaN 437 262 51 51 367 393 427 475 427 475 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10432 427 475 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10432 427 475 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10432 O95810 366 O95810 O95810 Serum deprivation-response protein SDPR sp|O95810|SDPR_HUMAN Serum deprivation-response protein OS=Homo sapiens GN=SDPR PE=1 SV=3 0.339622 1.90856 1.06051E-34 299.97 283.3 299.97 S IAEEAAEKATSRGSNSGMDSNIDLTIVEDEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPPP AT(0.219)S(0.219)RGS(0.219)NS(0.34)GMDS(0.004)NIDLTIVEDEEEESVALEQAQK AT(-1.91)S(-1.91)RGS(-1.91)NS(1.91)GMDS(-19.47)NIDLT(-105.32)IVEDEEEES(-246.7)VALEQAQK 8 4 -0.98322 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 438 263 366 366 539 573 614 686 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21807 614 686 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21807 614 686 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21807 O95810 24 O95810 O95810 Serum deprivation-response protein SDPR sp|O95810|SDPR_HUMAN Serum deprivation-response protein OS=Homo sapiens GN=SDPR PE=1 SV=3 0.540173 2.16995 9.13078E-18 228.03 198.11 228.03 1 S EKFQHPGSDMRQEKPSSPSPMPSSTPSPSLN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP QEKPS(0.54)S(0.328)PS(0.132)PMPSSTPSPSLNLGNTEEAIR QEKPS(2.17)S(-2.17)PS(-6.12)PMPS(-50.57)S(-71.32)T(-76)PS(-108.68)PS(-145.94)LNLGNT(-217.39)EEAIR 5 4 -0.0021986 3111.9 0 0 10685 0 0 4631.6 0 0 10315 0 0 6030.3 0 0 4490.7 0 0 8993.2 0 0 7826.4 0 0 13037 0 0 12870 0 0 2950.4 0 0 10091 0 0 4599.1 0 0 10520 0 0 6082.7 0 0 4827.3 0 0 9122.7 0 0 8109 0 0 12692 0 0 12300 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25993000 25993000 0 0 NaN 439 263 24 24 3012 3193 3416 3788 3416 3788 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16899 3416 3788 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16899 3416 3788 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16899 O95810 288 O95810 O95810 Serum deprivation-response protein SDPR sp|O95810|SDPR_HUMAN Serum deprivation-response protein OS=Homo sapiens GN=SDPR PE=1 SV=3 0.913394 10.3327 0.0419623 47.618 25.012 47.618 2 S KSLTSNHQKISSGKSSPFKVSPLTFGRKKVR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPXXXX S(0.087)S(0.913)PFKVS(0.913)PLT(0.087)FGR S(-10.33)S(10.33)PFKVS(10.33)PLT(-10.33)FGR 2 3 -0.062355 0 3063 0 0 8238.7 0 0 3284.3 0 0 8370.7 0 0 5780.5 0 0 2893.3 0 0 5770.9 0 0 6927.6 0 0 8071.3 0 0 10623 0 0 2899.2 0 0 7783.5 0 0 3324.9 0 0 8498.7 0 0 5720.7 0 0 3215.2 0 0 5937.7 0 0 7112.6 0 0 7866.4 0 0 10163 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 16421000 0 16421000 0 NaN 440 263 288 288 4379 4665;4666 4970 5515 4970 5515 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20455 4970 5515 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20455 4970 5515 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20455 O95810 293 O95810 O95810 Serum deprivation-response protein SDPR sp|O95810|SDPR_HUMAN Serum deprivation-response protein OS=Homo sapiens GN=SDPR PE=1 SV=3 0.913402 10.3327 0.00979626 72.932 43.244 47.618 1;2 S NHQKISSGKSSPFKVSPLTFGRKKVREGESH X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPXXXXXXXXX S(0.087)S(0.913)PFKVS(0.913)PLT(0.087)FGR S(-10.33)S(10.33)PFKVS(10.33)PLT(-10.33)FGR 7 3 -0.062355 2414.4 3063 0 13053 8238.7 0 3283.2 3284.3 0 12969 8370.7 0 26964 5780.5 0 2959.3 2893.3 0 28764 5770.9 0 15649 6927.6 0 16782 8071.3 0 7439.9 10623 0 2287.9 2899.2 0 12330 7783.5 0 3549.3 3324.9 0 13160 8498.7 0 25979 5720.7 0 3586.1 3215.2 0 28865 5937.7 0 15430 7112.6 0 17067 7866.4 0 7367.7 10163 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 62644000 46223000 16421000 0 NaN 441 263 293 293 4379 4665;4666 4969;4970 5514;5515 4970 5515 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20455 4969 5514 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19920 4969 5514 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19920 O95816 73 O95816 O95816 BAG family molecular chaperone regulator 2 BAG2 sp|O95816|BAG2_HUMAN BAG family molecular chaperone regulator 2 OS=Homo sapiens GN=BAG2 PE=1 SV=1 1 143.588 9.33E-11 190.91 167 190.91 1 S EMIHSIQNSQDMRQISDGEREELNLTANRLM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX QIS(1)DGEREELNLTANR QIS(143.59)DGEREELNLT(-143.59)ANR 3 3 -0.48806 10250 0 0 9868.3 0 0 9347.8 0 0 10423 0 0 9022.3 0 0 10838 0 0 8664.2 0 0 9743.8 0 0 8490.4 0 0 33673 0 0 9695.5 0 0 9325.4 0 0 9459.9 0 0 10675 0 0 9169.8 0 0 10895 0 0 8831.9 0 0 10831 0 0 8384.9 0 0 31932 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29384000 29384000 0 0 NaN 442 264 73 73 3049 3235 3461 3835 3461 3835 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13614 3461 3835 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13614 3461 3835 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13614 O95817 377 O95817 O95817 BAG family molecular chaperone regulator 3 BAG3 sp|O95817|BAG3_HUMAN BAG family molecular chaperone regulator 3 OS=Homo sapiens GN=BAG3 PE=1 SV=3 0.5166 5.02776 0.0440286 42.468 19.566 42.468 1 S VEVKVPPAPVPCPPPSPGPSAVPSSPKSVAT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPPPPPXXXX VPPAPVPCPPPS(0.517)PGPS(0.159)AVPS(0.162)S(0.162)PK VPPAPVPCPPPS(5.03)PGPS(-5.12)AVPS(-5.03)S(-5.03)PK 12 4 -0.69702 4439.7 0 0 5384.2 0 0 4560 0 0 6257.7 0 0 4542.5 0 0 4622.8 0 0 3921.1 0 0 5099.2 0 0 5575.5 0 0 7354.7 0 0 4201.5 0 0 5091.2 0 0 4583.3 0 0 6345.7 0 0 4603.6 0 0 4726.4 0 0 4066.5 0 0 5318 0 0 5431.2 0 0 7043.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18115000 18115000 0 0 NaN 443 265 377 377 5207 5551 5915 6572 5915 6572 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16785 5915 6572 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16785 5915 6572 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16785 O95819 900 O95819 O95819 Mitogen-activated protein kinase kinase kinase kinase 4 MAP4K4 sp|O95819|M4K4_HUMAN Mitogen-activated protein kinase kinase kinase kinase 4 OS=Homo sapiens GN=MAP4K4 PE=1 SV=2 1 70.6604 9.39076E-12 182.07 161.17 182.07 1 S GMRPEAIRQDPTRKGSVVNVNPTNTRPQSDT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP KGS(1)VVNVNPTNTRPQSDTPEIR KGS(70.66)VVNVNPT(-75.64)NT(-70.66)RPQS(-85.75)DT(-103.42)PEIR 3 4 0.43317 11903 0 0 9665.6 0 0 11729 0 0 10757 0 0 11125 0 0 10188 0 0 11121 0 0 9491.2 0 0 9660.5 0 0 4162.5 0 0 11263 0 0 9137 0 0 11813 0 0 10969 0 0 11324 0 0 10237 0 0 11280 0 0 9672.8 0 0 9594 0 0 4139.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24958000 24958000 0 0 NaN 444 266 900 900 2084 2204 2373 2643 2373 2643 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12164 2373 2643 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12164 2373 2643 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12164 O95819 639 O95819 O95819 Mitogen-activated protein kinase kinase kinase kinase 4 MAP4K4 sp|O95819|M4K4_HUMAN Mitogen-activated protein kinase kinase kinase kinase 4 OS=Homo sapiens GN=MAP4K4 PE=1 SV=2 1 98.2513 7.83097E-11 184.93 168.99 184.93 1 S PVRTTSRSPVLSRRDSPLQGSGQQNSQAGQR X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RDS(1)PLQGSGQQNSQAGQR RDS(98.25)PLQGS(-98.25)GQQNS(-158.46)QAGQR 3 3 0.40302 2752.2 0 0 2708.6 0 0 2315.6 0 0 2305.2 0 0 3354.5 0 0 2706.7 0 0 2901 0 0 2263.9 0 0 3484 0 0 2223.4 0 0 2602.7 0 0 2556.4 0 0 2368.6 0 0 2398 0 0 3337 0 0 2693.8 0 0 2990.7 0 0 2355 0 0 3412.9 0 0 2146 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12101000 12101000 0 0 NaN 445 266 639 639 3213 3407 3641 4037 3641 4037 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5753 3641 4037 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5753 3641 4037 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5753 O95819 631 O95819 O95819 Mitogen-activated protein kinase kinase kinase kinase 4 MAP4K4 sp|O95819|M4K4_HUMAN Mitogen-activated protein kinase kinase kinase kinase 4 OS=Homo sapiens GN=MAP4K4 PE=1 SV=2 0.87087 8.67588 0.00556036 90.156 53.734 90.156 1 S QRPAEPQVPVRTTSRSPVLSRRDSPLQGSGQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX T(0.001)T(0.002)S(0.008)RS(0.871)PVLS(0.118)R T(-28.07)T(-26.6)S(-20.52)RS(8.68)PVLS(-8.68)R 5 2 -0.19189 10576 0 0 15857 0 0 12039 0 0 14752 0 0 15757 0 0 11527 0 0 17602 0 0 14913 0 0 13478 0 0 3751.8 0 0 10013 0 0 14973 0 0 12088 0 0 15163 0 0 15793 0 0 11748 0 0 17715 0 0 14941 0 0 13474 0 0 3878 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 41330000 41330000 0 0 NaN 446 266 631 631 4991 5320 5668 6297 5668 6297 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6674 5668 6297 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6674 5668 6297 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6674 O95831 268 O95831 O95831 Apoptosis-inducing factor 1, mitochondrial AIFM1 sp|O95831|AIFM1_HUMAN Apoptosis-inducing factor 1, mitochondrial OS=Homo sapiens GN=AIFM1 PE=1 SV=1 0.632279 2.35391 0.0144182 80.688 16.872 80.688 1 S YEKCLIATGGTPRSLSAIDRAGAEVKSRTTL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX S(0.368)LS(0.632)AIDR S(-2.35)LS(2.35)AIDR 3 2 0.40166 14458 0 0 24299 0 0 15874 0 0 23551 0 0 16442 0 0 14535 0 0 15898 0 0 18258 0 0 26998 0 0 3479.8 0 0 13686 0 0 22950 0 0 15909 0 0 24083 0 0 16655 0 0 15025 0 0 16513 0 0 18275 0 0 26168 0 0 3699.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 40445000 40445000 0 0 NaN 447 267 268 268 3975 4235 4519 5022 4519 5022 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13117 4519 5022 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13117 4519 5022 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13117 O95835 613 O95835 O95835 Serine/threonine-protein kinase LATS1 LATS1 sp|O95835|LATS1_HUMAN Serine/threonine-protein kinase LATS1 OS=Homo sapiens GN=LATS1 PE=1 SV=1 0.82582 9.17313 0.00904427 77.1 56.147 77.1 1 S ENVDSGDKEKKQITTSPITVRKNKKDEERRE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX KQIT(0.072)T(0.1)S(0.826)PIT(0.002)VR KQIT(-10.59)T(-9.17)S(9.17)PIT(-25.74)VR 6 3 0.35029 12494 0 0 19594 0 0 14208 0 0 18139 0 0 11389 0 0 14347 0 0 11525 0 0 16188 0 0 19538 0 0 4692 0 0 11829 0 0 18501 0 0 14174 0 0 18652 0 0 11734 0 0 14582 0 0 11944 0 0 16308 0 0 18938 0 0 4792.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 34126000 34126000 0 0 NaN 448 268 613 613 2179;3053 2302;3239 2478 2758 2478 2758 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13095 2478 2758 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13095 2478 2758 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13095 O95835 464 O95835 O95835 Serine/threonine-protein kinase LATS1 LATS1 sp|O95835|LATS1_HUMAN Serine/threonine-protein kinase LATS1 OS=Homo sapiens GN=LATS1 PE=1 SV=1 0.993267 21.6885 2.17371E-10 200.9 154.83 200.9 1 S HEIPTWQPNIPVRSNSFNNPLGNRASHSANS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX S(0.007)NS(0.993)FNNPLGNR S(-21.69)NS(21.69)FNNPLGNR 3 2 -0.5843 28071 0 0 37926 0 0 27950 0 0 45281 0 0 25758 0 0 26853 0 0 21637 0 0 30546 0 0 46552 0 0 11917 0 0 26562 0 0 35869 0 0 28116 0 0 45748 0 0 26234 0 0 27808 0 0 22905 0 0 30856 0 0 44876 0 0 11928 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 46892000 46892000 0 0 NaN 449 268 464 464 4054 4322 4611 5121 4611 5121 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13254 4611 5121 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13254 4611 5121 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13254 O95866 226 O95866 O95866 Protein G6b G6B sp|O95866|G6B_HUMAN Protein G6b OS=Homo sapiens GN=G6B PE=1 SV=1 0.748173 4.72925 2.62111E-08 173.98 134.99 173.98 1 S YADLDHLALSRPRRLSTADPADASTIYAVVV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RLS(0.748)T(0.252)ADPADASTIYAVVV RLS(4.73)T(-4.73)ADPADAS(-47.21)T(-71.33)IY(-125.42)AVVV 3 2 -0.48081 1779.1 0 0 1614.2 0 0 1691.8 0 0 1896.7 0 0 4635.9 0 0 1793.2 0 0 4682.6 0 0 4042.1 0 0 2107.9 0 0 23236 0 0 1683.2 0 0 1526.4 0 0 1744.7 0 0 1928.6 0 0 4528.9 0 0 1873.9 0 0 4693.7 0 0 4667.5 0 0 2189 0 0 21973 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20004000 20004000 0 0 NaN 450 269 226 226 3350 3552 3790 4208 3790 4208 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22650 3790 4208 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22650 3790 4208 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22650 Q96SF7;O95935 531;543 Q96SF7 Q96SF7 T-box transcription factor TBX15;T-box transcription factor TBX18 TBX15;TBX18 sp|Q96SF7|TBX15_HUMAN T-box transcription factor TBX15 OS=Homo sapiens GN=TBX15 PE=2 SV=2;sp|O95935|TBX18_HUMAN T-box transcription factor TBX18 OS=Homo sapiens GN=TBX18 PE=2 SV=3 1 90.7612 0.00854956 90.761 30.742 90.761 1 S NLYGYNFPTSPRLAASPEKLSASQSTLLCSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX LAAS(1)PEK LAAS(90.76)PEK 4 2 -0.4117 43239 0 0 9945.6 0 0 44554 0 0 10081 0 0 11822 0 0 48110 0 0 12345 0 0 20121 0 0 11223 0 0 4150.1 0 0 40920 0 0 9396 0 0 44388 0 0 10954 0 0 13936 0 0 46183 0 0 12510 0 0 21393 0 0 11122 0 0 4373.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27005000 27005000 0 0 NaN 451 270 531 531 2282 2411 2594 2899 2594 2899 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10474 2594 2899 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10474 2594 2899 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10474 O95983 85 O95983 O95983 Methyl-CpG-binding domain protein 3 MBD3 sp|O95983|MBD3_HUMAN Methyl-CpG-binding domain protein 3 OS=Homo sapiens GN=MBD3 PE=1 SV=1 0.755966 4.91075 0.000682159 123.01 83.986 91.993 1 S LMSKMNKSRQRVRYDSSNQVKGKPDLNTALP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX VRYDS(0.756)S(0.244)NQVK VRY(-47.69)DS(4.91)S(-4.91)NQVK 5 3 -0.14624 51757 0 0 91267 0 0 51581 0 0 89303 0 0 70138 0 0 48919 0 0 74715 0 0 77247 0 0 96340 0 0 47354 0 0 48975 0 0 86205 0 0 52185 0 0 91165 0 0 70166 0 0 51281 0 0 76426 0 0 77813 0 0 94141 0 0 46378 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 154010000 154010000 0 0 NaN 452 271 85 85 5237;5363 5582;5713 5950;6092 6614;6771 5950 6614 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9347 6092 6771 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9326 6092 6771 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9326 O95983 86 O95983 O95983 Methyl-CpG-binding domain protein 3 MBD3 sp|O95983|MBD3_HUMAN Methyl-CpG-binding domain protein 3 OS=Homo sapiens GN=MBD3 PE=1 SV=1 0.499991 0 0.000682159 123.01 83.986 123.01 1 S MSKMNKSRQRVRYDSSNQVKGKPDLNTALPV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX YDS(0.5)S(0.5)NQVK Y(-44.67)DS(0)S(0)NQVK 4 2 0.59097 36409 0 0 64697 0 0 34637 0 0 62524 0 0 50202 0 0 32980 0 0 54250 0 0 53725 0 0 66137 0 0 43755 0 0 34446 0 0 61105 0 0 35178 0 0 63855 0 0 50095 0 0 34719 0 0 55353 0 0 54404 0 0 64753 0 0 42444 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 66017000 66017000 0 0 NaN 453 271 86 86 5237;5363 5582;5713 6092 6771 6092 6771 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9326 6092 6771 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9326 6092 6771 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9326 Q9NZH5;O95997 165;165 Q9NZH5 Q9NZH5 Securin-2;Securin PTTG2;PTTG1 sp|Q9NZH5|PTTG2_HUMAN Securin-2 OS=Homo sapiens GN=PTTG2 PE=2 SV=2;sp|O95997|PTTG1_HUMAN Securin OS=Homo sapiens GN=PTTG1 PE=1 SV=1 1 79.8103 0.00695689 79.81 56.206 79.81 1 S DEEGELEKLFQLGPPSPVKMPSPPWECNLLQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX LFQLGPPS(1)PVK LFQLGPPS(79.81)PVK 8 3 -0.28681 3123.4 0 0 5192.2 0 0 2903.5 0 0 5500.4 0 0 2965.8 0 0 3171.3 0 0 3120.9 0 0 4700.9 0 0 6796.2 0 0 5132 0 0 2954.7 0 0 4906.7 0 0 2937.3 0 0 5591.4 0 0 3011.7 0 0 3311.6 0 0 3270 0 0 4810.7 0 0 6549.9 0 0 4941.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 67872000 67872000 0 0 NaN 454 272 165 165 2352 2485 2674 2986 2674 2986 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22633 2674 2986 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22633 2674 2986 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22633 O96007 2 O96007 O96007 Molybdopterin synthase catalytic subunit MOCS2 sp|O96007|MOC2B_HUMAN Molybdopterin synthase catalytic subunit OS=Homo sapiens GN=MOCS2 PE=1 SV=1 0.49991 0 9.12284E-11 149.31 122.19 149.31 1 S ______________MSSLEISSSCFSLETKL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPX S(0.5)S(0.5)LEISSSCFSLETK S(0)S(0)LEIS(-34.47)S(-54.04)S(-63.47)CFS(-89.6)LET(-112.13)K 1 2 -0.82525 3195.6 0 0 4764.8 0 0 2894 0 0 4810.1 0 0 12234 0 0 3668.9 0 0 13773 0 0 8406.1 0 0 5080 0 0 28111 0 0 3022.7 0 0 4501.4 0 0 3048.7 0 0 4917.7 0 0 11877 0 0 3840.8 0 0 13708 0 0 9095.4 0 0 5381.2 0 0 26665 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15261000 15261000 0 0 NaN 455 273 2 2 4363 4647 4951 5496 4951 5496 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21509 4951 5496 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21509 4951 5496 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21509 O96007 3 O96007 O96007 Molybdopterin synthase catalytic subunit MOCS2 sp|O96007|MOC2B_HUMAN Molybdopterin synthase catalytic subunit OS=Homo sapiens GN=MOCS2 PE=1 SV=1 0.49991 0 9.12284E-11 149.31 122.19 149.31 1 S _____________MSSLEISSSCFSLETKLP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.5)S(0.5)LEISSSCFSLETK S(0)S(0)LEIS(-34.47)S(-54.04)S(-63.47)CFS(-89.6)LET(-112.13)K 2 2 -0.82525 3195.6 0 0 4764.8 0 0 2894 0 0 4810.1 0 0 12234 0 0 3668.9 0 0 13773 0 0 8406.1 0 0 5080 0 0 28111 0 0 3022.7 0 0 4501.4 0 0 3048.7 0 0 4917.7 0 0 11877 0 0 3840.8 0 0 13708 0 0 9095.4 0 0 5381.2 0 0 26665 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15261000 15261000 0 0 NaN 456 273 3 3 4363 4647 4951 5496 4951 5496 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21509 4951 5496 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21509 4951 5496 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21509 O96013 181 O96013 O96013 Serine/threonine-protein kinase PAK 4 PAK4 sp|O96013|PAK4_HUMAN Serine/threonine-protein kinase PAK 4 OS=Homo sapiens GN=PAK4 PE=1 SV=1 0.999896 39.8173 3.15048E-12 180.23 157.06 180.23 1 S GSGGPQESSRDKRPLSGPDVGTPQPAGLASG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP DKRPLS(1)GPDVGTPQPAGLASGAK DKRPLS(39.82)GPDVGT(-39.82)PQPAGLAS(-160.64)GAK 6 4 0.2858 8755.8 0 0 21437 0 0 8396.1 0 0 21401 0 0 13733 0 0 9410.1 0 0 11869 0 0 14436 0 0 25752 0 0 9396.2 0 0 8283.8 0 0 20250 0 0 8536.9 0 0 21784 0 0 13608 0 0 10048 0 0 12552 0 0 14569 0 0 24821 0 0 9181.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 94976000 94976000 0 0 NaN 457 274 181 181 720 764 815 901 815 901 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14318 815 901 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14318 815 901 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14318 O96013 104 O96013 O96013 Serine/threonine-protein kinase PAK 4 PAK4 sp|O96013|PAK4_HUMAN Serine/threonine-protein kinase PAK 4 OS=Homo sapiens GN=PAK4 PE=1 SV=1 1 69.8152 0.0113489 69.815 34.493 69.815 1 S FENMSVTRSNSLRRDSPPPPARARQENGMPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX RDS(1)PPPPAR RDS(69.82)PPPPAR 3 3 2.4047 3701.8 0 0 4952.7 0 0 4090.2 0 0 5368.9 0 0 5262.5 0 0 3776.1 0 0 4877.1 0 0 4710.5 0 0 5048.6 0 0 4632.8 0 0 3504.3 0 0 4681.1 0 0 4109.9 0 0 5461.6 0 0 5265.9 0 0 3876.5 0 0 4987.7 0 0 4828.3 0 0 4974.2 0 0 4471.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 3251300 3251300 0 0 NaN 458 274 104 104 3214 3408 3642 4038 3642 4038 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5281 3642 4038 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5281 3642 4038 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5281 O96013 474 O96013 O96013 Serine/threonine-protein kinase PAK 4 PAK4 sp|O96013|PAK4_HUMAN Serine/threonine-protein kinase PAK 4 OS=Homo sapiens GN=PAK4 PE=1 SV=1 0.99997 45.2303 1.89453E-23 284.74 242.66 284.74 1 S FGFCAQVSKEVPRRKSLVGTPYWMAPELISR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(1)LVGTPYWMAPELISR S(45.23)LVGT(-45.23)PY(-128.73)WMAPELIS(-180.86)R 1 2 1.3883 19638 0 0 49978 0 0 19714 0 0 42667 0 0 24498 0 0 17301 0 0 30843 0 0 33964 0 0 41830 0 0 87001 0 0 18583 0 0 47171 0 0 19917 0 0 43848 0 0 24678 0 0 18847 0 0 31392 0 0 36044 0 0 40808 0 0 82708 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 72221000 72221000 0 0 NaN 459 274 474 474 4018 4284 4572 5080 4572 5080 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23825 4572 5080 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23825 4572 5080 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23825 O96019 233 O96019 O96019 Actin-like protein 6A ACTL6A sp|O96019|ACL6A_HUMAN Actin-like protein 6A OS=Homo sapiens GN=ACTL6A PE=1 SV=1 1 76.6816 3.5818E-05 129.88 98.049 76.682 1 S VPPYMIASKEAVREGSPANWKRKEKLPQVTR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX EGS(1)PANWK EGS(76.68)PANWK 3 2 0.23132 89223 0 0 166280 0 0 95518 0 0 164890 0 0 94891 0 0 84864 0 0 95953 0 0 115230 0 0 170950 0 0 17766 0 0 84452 0 0 157070 0 0 95814 0 0 168100 0 0 96418 0 0 89050 0 0 99675 0 0 114940 0 0 165490 0 0 19396 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 413700000 413700000 0 0 NaN 460 275 233 233 892;977 945;1031 1024;1117 1132;1232 1117 1232 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13114 1024 1132 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12296 1024 1132 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12296 O96028 121 O96028 O96028 Histone-lysine N-methyltransferase NSD2 WHSC1 sp|O96028|NSD2_HUMAN Histone-lysine N-methyltransferase NSD2 OS=Homo sapiens GN=WHSC1 PE=1 SV=1 1 73.4995 0.0186066 73.499 22.223 73.499 1 S KGIGTPPNTTPIKNGSPEIKLKITKTYMNGK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX NGS(1)PEIK NGS(73.5)PEIK 3 2 -0.14195 18897 0 0 21965 0 0 19314 0 0 22214 0 0 16292 0 0 17431 0 0 15410 0 0 19872 0 0 23946 0 0 4823.8 0 0 17883 0 0 20751 0 0 19385 0 0 22716 0 0 16707 0 0 17725 0 0 15962 0 0 19984 0 0 23265 0 0 5002.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12705000 12705000 0 0 NaN 461 276 121 121 2817 2987 3200 3552 3200 3552 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9492 3200 3552 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9492 3200 3552 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9492 O96028 555 O96028 O96028 Histone-lysine N-methyltransferase NSD2 WHSC1 sp|O96028|NSD2_HUMAN Histone-lysine N-methyltransferase NSD2 OS=Homo sapiens GN=WHSC1 PE=1 SV=1 0.997648 26.2755 0.0277148 52.79 18.069 52.79 1 S EAEDTPRKRLRTDKHSLRKRDTITDKTARTS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX T(0.002)DKHS(0.998)LR T(-26.28)DKHS(26.28)LR 5 3 1.5235 14832 0 0 18614 0 0 16847 0 0 19717 0 0 21270 0 0 17589 0 0 22517 0 0 20506 0 0 19796 0 0 4061.7 0 0 14043 0 0 17590 0 0 16904 0 0 20143 0 0 21339 0 0 17769 0 0 22786 0 0 20578 0 0 19649 0 0 4299.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22207000 22207000 0 0 NaN 462 276 555 555 4661 4972 5296 5884 5296 5884 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6063 5296 5884 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6063 5296 5884 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6063 P00488 82 P00488 P00488 Coagulation factor XIII A chain F13A1 sp|P00488|F13A_HUMAN Coagulation factor XIII A chain OS=Homo sapiens GN=F13A1 PE=1 SV=4 0.999895 39.7746 0.0529159 46.158 10.72 46.158 2 S TDKYENNKLIVRRGQSFYVQIDFSRPYDPRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX RGQS(1)FY(1)VQIDFSR RGQS(39.77)FY(39.63)VQIDFS(-39.63)R 4 2 0.087772 0 4783.8 0 0 7263.7 0 0 6062.9 0 0 6778.2 0 0 6912.7 0 0 6706.5 0 0 6604.7 0 0 7928.2 0 0 6974.6 0 0 49740 0 0 4531.5 0 0 6859 0 0 6041.2 0 0 6988.1 0 0 6960.8 0 0 6834.5 0 0 6747.9 0 0 9404 0 0 6866.2 0 0 47019 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 77953000 0 77953000 0 NaN 463 280 82 82 3247 3444 3680 4083 3680 4083 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23487 3680 4083 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23487 3680 4083 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23487 P00519 917 P00519 P00519 Tyrosine-protein kinase ABL1 ABL1 sp|P00519|ABL1_HUMAN Tyrosine-protein kinase ABL1 OS=Homo sapiens GN=ABL1 PE=1 SV=4 0.816598 8.7123 6.6559E-12 190.8 161.06 190.8 1 S PPAASAGKAGGKPSQSPSQEAAGEAVLGAKT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPPX AGGKPS(0.074)QS(0.817)PS(0.11)QEAAGEAVLGAK AGGKPS(-10.45)QS(8.71)PS(-8.71)QEAAGEAVLGAK 8 3 0.62168 4619.5 0 0 21614 0 0 5978.2 0 0 22584 0 0 6466.8 0 0 5676.2 0 0 5631.5 0 0 10936 0 0 24676 0 0 11686 0 0 4376.3 0 0 20424 0 0 5946 0 0 22858 0 0 6539.9 0 0 6532.2 0 0 6294 0 0 11118 0 0 23540 0 0 11257 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13351000 13351000 0 0 NaN 464 281 917 917 201 210 226 254 226 254 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14321 226 254 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14321 226 254 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14321 P00519 569 P00519 P00519 Tyrosine-protein kinase ABL1 ABL1 sp|P00519|ABL1_HUMAN Tyrosine-protein kinase ABL1 OS=Homo sapiens GN=ABL1 PE=1 SV=4 1 107.314 1.43254E-08 172.74 154.28 172.74 1 S KGQGESDPLDHEPAVSPLLPRKERGPPEGGL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX GQGESDPLDHEPAVS(1)PLLPR GQGES(-107.31)DPLDHEPAVS(107.31)PLLPR 15 3 1.0398 4587.8 0 0 7803 0 0 4743.7 0 0 8852.1 0 0 4148.2 0 0 5583 0 0 4369 0 0 6758.8 0 0 8113.7 0 0 10679 0 0 4341.8 0 0 7377.2 0 0 4760.8 0 0 8972.5 0 0 4251.5 0 0 5776.9 0 0 4539.2 0 0 7055.8 0 0 7847 0 0 10212 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 32080000 32080000 0 0 NaN 465 281 569 569 1576 1660 1794 1992 1794 1992 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17945 1794 1992 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17945 1794 1992 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17945 P00558 203 P00558 P00558 Phosphoglycerate kinase 1 PGK1 sp|P00558|PGK1_HUMAN Phosphoglycerate kinase 1 OS=Homo sapiens GN=PGK1 PE=1 SV=3 1 218.687 7.48252E-16 218.69 190.61 218.69 1 S FLMKKELNYFAKALESPERPFLAILGGAKVA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPXX ALES(1)PERPFLAILGGAK ALES(218.69)PERPFLAILGGAK 4 3 -0.16863 69889 0 0 89375 0 0 68112 0 0 89885 0 0 112020 0 0 72281 0 0 113030 0 0 92937 0 0 97101 0 0 34330 0 0 66126 0 0 84432 0 0 69226 0 0 91977 0 0 111080 0 0 73560 0 0 114570 0 0 93457 0 0 96485 0 0 34477 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 162730000 162730000 0 0 NaN 466 282 203 203 290 311 332 371 332 371 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23595 332 371 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23595 332 371 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23595 P01106;P04198 62;62 P01106 P01106 Myc proto-oncogene protein;N-myc proto-oncogene protein MYC;MYCN sp|P01106|MYC_HUMAN Myc proto-oncogene protein OS=Homo sapiens GN=MYC PE=1 SV=1;sp|P04198|MYCN_HUMAN N-myc proto-oncogene protein OS=Homo sapiens GN=MYCN PE=1 SV=2 0.988883 20.212 0.000147307 105.96 87.362 91.475 1 S EDIWKKFELLPTPPLSPSRRSGLCSPSYVAV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPXXXXXXXXXXX FELLPT(0.002)PPLS(0.989)PS(0.009)RR FELLPT(-27.65)PPLS(20.21)PS(-20.21)RR 10 3 -0.0042514 13735 0 0 12685 0 0 14065 0 0 12486 0 0 8688.4 0 0 14249 0 0 10288 0 0 12654 0 0 11685 0 0 24030 0 0 12998 0 0 11981 0 0 14081 0 0 12861 0 0 9158.4 0 0 14230 0 0 10433 0 0 13479 0 0 11471 0 0 22920 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 27699000 27699000 0 0 NaN 467 283 62 62 1254;2055;2056 1319;2174;2175 1420;2342;2343 1573;2609;2610 1420 1573 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21355 2343 2610 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19328 2343 2610 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19328 P01106 159 P01106 P01106 Myc proto-oncogene protein MYC sp|P01106|MYC_HUMAN Myc proto-oncogene protein OS=Homo sapiens GN=MYC PE=1 SV=1 0.570011 1.22425 0.0112596 70.332 42.363 70.332 1 S LVSEKLASYQAARKDSGSPNPARGHSVCSTS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX KDS(0.57)GS(0.43)PNPAR KDS(1.22)GS(-1.22)PNPAR 3 3 0.28515 8426.5 0 0 8266.4 0 0 9764.8 0 0 8138.5 0 0 5889.4 0 0 8166.2 0 0 5960.8 0 0 6575.7 0 0 8200.8 0 0 2380.8 0 0 7978.6 0 0 7808.3 0 0 9708.3 0 0 8364.6 0 0 6208.5 0 0 8168.7 0 0 6125.5 0 0 6729.3 0 0 7996.8 0 0 2394 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23892000 23892000 0 0 NaN 468 283 159 159 2032 2150 2317 2584 2317 2584 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5908 2317 2584 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5908 2317 2584 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5908 P01106 71 P01106 P01106 Myc proto-oncogene protein MYC sp|P01106|MYC_HUMAN Myc proto-oncogene protein OS=Homo sapiens GN=MYC PE=1 SV=1 0.939814 12.379 7.69989E-05 109.65 88.987 109.65 1 S LPTPPLSPSRRSGLCSPSYVAVTPFSLRGDN X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPXXX S(0.006)GLCS(0.94)PS(0.054)YVAVTPFSLR S(-22.3)GLCS(12.38)PS(-12.38)Y(-34.86)VAVT(-90.72)PFS(-100.23)LR 5 3 -0.19515 2480.7 0 0 2587 0 0 2977.1 0 0 2794.1 0 0 2458.6 0 0 3048.4 0 0 3261.1 0 0 3028.6 0 0 2850.3 0 0 10430 0 0 2349.3 0 0 2445.1 0 0 2964.4 0 0 2860.4 0 0 2536.6 0 0 3063.6 0 0 3269.8 0 0 3353 0 0 2829.8 0 0 9891.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 4934400 4934400 0 0 NaN 469 283 71 71 3787 4034 4303 4782 4303 4782 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22741 4303 4782 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22741 4303 4782 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22741 P02100 51 P02100 P02100 Hemoglobin subunit epsilon HBE1 sp|P02100|HBE_HUMAN Hemoglobin subunit epsilon OS=Homo sapiens GN=HBE1 PE=1 SV=2 0.838126 8.30755 5.11623E-05 111.25 93.329 111.25 1 S YPWTQRFFDSFGNLSSPSAILGNPKVKAHGK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPXXXXXX FFDSFGNLS(0.124)S(0.838)PS(0.038)AILGNPK FFDS(-60.92)FGNLS(-8.31)S(8.31)PS(-13.42)AILGNPK 10 3 -0.35307 5738.5 0 0 44446 0 0 5562.6 0 0 43925 0 0 4813.2 0 0 7009 0 0 4668.1 0 0 20201 0 0 49097 0 0 34716 0 0 5429.5 0 0 41984 0 0 5601.9 0 0 44539 0 0 4968.6 0 0 8903.9 0 0 5975.4 0 0 20798 0 0 46560 0 0 33157 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 54839000 54839000 0 0 NaN 470 284 51 51 1258 1323 1424 1579 1424 1579 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23999 1424 1579 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23999 1424 1579 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23999 P02545 404 P02545 P02545 Prelamin-A/C;Lamin-A/C LMNA sp|P02545|LMNA_HUMAN Prelamin-A/C OS=Homo sapiens GN=LMNA PE=1 SV=1 0.803839 7.69277 0.000119028 114.75 101.32 114.75 2 S LSPSPTSQRSRGRASSHSSQTQGGGSVTKKR X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX AS(0.137)S(0.804)HS(0.128)S(0.929)QT(0.002)QGGGSVTK AS(-7.69)S(7.69)HS(-11.02)S(11.02)QT(-27.54)QGGGS(-90.34)VT(-98.16)K 3 3 0.12655 0 7497.2 0 0 11990 0 0 6810.3 0 0 12044 0 0 7780.3 0 0 9697 0 0 8332.1 0 0 13667 0 0 12369 0 0 2334 0 0 7091.7 0 0 11327 0 0 6910 0 0 12325 0 0 7849.8 0 0 9878.7 0 0 8565.4 0 0 13625 0 0 12033 0 0 2514 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 10871000 0 10871000 0 NaN 471 285 404 404 498 529 569 634 569 634 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6925 569 634 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6925 569 634 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6925 P02545 407 P02545 P02545 Prelamin-A/C;Lamin-A/C LMNA sp|P02545|LMNA_HUMAN Prelamin-A/C OS=Homo sapiens GN=LMNA PE=1 SV=1 0.928814 11.0154 0.000119028 114.75 101.32 114.75 2 S SPTSQRSRGRASSHSSQTQGGGSVTKKRKLE Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPXXXXX AS(0.137)S(0.804)HS(0.128)S(0.929)QT(0.002)QGGGSVTK AS(-7.69)S(7.69)HS(-11.02)S(11.02)QT(-27.54)QGGGS(-90.34)VT(-98.16)K 6 3 0.12655 0 7497.2 0 0 11990 0 0 6810.3 0 0 12044 0 0 7780.3 0 0 9697 0 0 8332.1 0 0 13667 0 0 12369 0 0 2334 0 0 7091.7 0 0 11327 0 0 6910 0 0 12325 0 0 7849.8 0 0 9878.7 0 0 8565.4 0 0 13625 0 0 12033 0 0 2514 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 10871000 0 10871000 0 NaN 472 285 407 407 498 529 569 634 569 634 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6925 569 634 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6925 569 634 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6925 P02545 390 P02545 P02545 Prelamin-A/C;Lamin-A/C LMNA sp|P02545|LMNA_HUMAN Prelamin-A/C OS=Homo sapiens GN=LMNA PE=1 SV=1 0.994919 22.9206 7.47772E-07 142.55 121.61 142.55 1;2 S AYRKLLEGEEERLRLSPSPTSQRSRGRASSH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX LRLS(0.995)PS(0.005)PTSQR LRLS(22.92)PS(-22.92)PT(-56.14)S(-67.97)QR 4 3 0.20779 8155.1 40831 0 18004 83244 0 8078.6 43245 0 18495 85446 0 5289.7 43849 0 8371.1 43611 0 6659.9 42758 0 10025 54686 0 19102 90664 0 1406.5 27553 0 7716.5 38646 0 17010 78650 0 8107.5 43412 0 18797 86926 0 5563.8 44492 0 8866 45772 0 7054.1 44888 0 10034 55255 0 18321 87426 0 1556.4 27210 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 363790000 280370000 83423000 0 NaN 473 285 390 390 2537;2578 2680;2681;2722 2876;2877;2878 3208;3209;3210 2876 3208 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11624 2876 3208 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11624 2876 3208 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11624 P02545 392 P02545 P02545 Prelamin-A/C;Lamin-A/C LMNA sp|P02545|LMNA_HUMAN Prelamin-A/C OS=Homo sapiens GN=LMNA PE=1 SV=1 0.99995 43.1734 4.38233E-09 184.27 125.57 184.27 1;2 S RKLLEGEEERLRLSPSPTSQRSRGRASSHSS X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY) XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX LSPS(1)PTSQR LS(-60.76)PS(43.17)PT(-43.17)S(-60.76)QR 4 2 -0.062661 19511 40831 0 65862 83244 0 19776 43245 0 67996 85446 0 14408 43849 0 15471 43611 0 13478 42758 0 35230 54686 0 70220 90664 0 2837.9 27553 0 18463 38646 0 62230 78650 0 19830 43412 0 68842 86926 0 14979 44492 0 18105 45772 0 15318 44888 0 34659 55255 0 66879 87426 0 3487.6 27210 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 344030000 260610000 83423000 0 NaN 474 285 392 392 2537;2578 2680;2681;2722 2877;2878;2920 3209;3210;3254 2920 3254 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8493 2920 3254 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8493 2920 3254 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8493 P02545 22 P02545 P02545 Prelamin-A/C;Lamin-A/C LMNA sp|P02545|LMNA_HUMAN Prelamin-A/C OS=Homo sapiens GN=LMNA PE=1 SV=1 0.999681 35.0964 1.49085E-15 218.83 181.27 218.83 1 S RRATRSGAQASSTPLSPTRITRLQEKEDLQE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPXXXXXXXXXXXX SGAQASSTPLS(1)PTR S(-93.47)GAQAS(-84.86)S(-73.79)T(-50.15)PLS(35.1)PT(-35.1)R 11 2 -0.5936 10232 0 0 55997 0 0 10301 0 0 51437 0 0 8782.8 0 0 8884.1 0 0 10366 0 0 23227 0 0 54880 0 0 5751.6 0 0 9682.7 0 0 52873 0 0 10353 0 0 52408 0 0 9066.9 0 0 10995 0 0 11694 0 0 22916 0 0 52262 0 0 5953.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 119530000 119530000 0 0 NaN 475 285 22 22 3773 4014 4279 4754 4279 4754 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8453 4279 4754 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8453 4279 4754 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8453 P02686 19 P02686 P02686 Myelin basic protein MBP sp|P02686|MBP_HUMAN Myelin basic protein OS=Homo sapiens GN=MBP PE=1 SV=3 0.986252 18.7093 6.16794E-05 126.4 94.059 126.4 1 S HAGKRELNAEKASTNSETNRGESEKKRNLGE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPXXXXXX ASTNS(0.986)ET(0.013)NRGESEK AS(-40.89)T(-34.01)NS(18.71)ET(-18.71)NRGES(-72.9)EK 5 3 0.34417 34044 0 0 6275.8 0 0 39111 0 0 7470.1 0 0 8832.4 0 0 34956 0 0 9144.6 0 0 17900 0 0 6095.4 0 0 3671.6 0 0 32233 0 0 5935.3 0 0 38721 0 0 8038.8 0 0 10752 0 0 33605 0 0 9209.9 0 0 18726 0 0 6143.7 0 0 3871.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30332000 30332000 0 0 NaN 476 286 19 19 513 545 585 652 585 652 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5965 585 652 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5965 585 652 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5965 P02686 112 P02686 P02686 Myelin basic protein MBP sp|P02686|MBP_HUMAN Myelin basic protein OS=Homo sapiens GN=MBP PE=1 SV=3 0.702812 3.7381 4.10199E-45 326.13 302.46 326.13 1 S RDAPGREDNTFKDRPSESDELQTIQEDSAAT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP DRPS(0.703)ES(0.297)DELQTIQEDSAATSESLDVMASQK DRPS(3.74)ES(-3.74)DELQT(-55.67)IQEDS(-152.32)AAT(-203.04)S(-216.42)ES(-243.08)LDVMAS(-318.67)QK 4 4 0.49906 1935.5 0 0 1437.5 0 0 2480.8 0 0 1546.4 0 0 2160.7 0 0 1718.5 0 0 1842.6 0 0 3233.8 0 0 1677.6 0 0 29144 0 0 1833.5 0 0 1358.6 0 0 2462.2 0 0 1583.9 0 0 2206.9 0 0 1788.7 0 0 1886.4 0 0 4063.2 0 0 1662.3 0 0 27518 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18667000 18667000 0 0 NaN 477 286 112 112 790 838 894 985 894 985 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22035 894 985 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22035 894 985 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22035 P04035 872 P04035 P04035 3-hydroxy-3-methylglutaryl-coenzyme A reductase HMGCR sp|P04035|HMDH_HUMAN 3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Homo sapiens GN=HMGCR PE=1 SV=1 1 90.9171 8.56449E-07 139.44 112.17 139.44 1 S LAAGHLVKSHMIHNRSKINLQDLQGACTKKT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPXX S(1)KINLQDLQGACTK S(90.92)KINLQDLQGACT(-90.92)K 1 3 -0.10475 16525 0 0 14786 0 0 17987 0 0 15318 0 0 9976.4 0 0 18301 0 0 9111.6 0 0 14303 0 0 16374 0 0 14806 0 0 15643 0 0 13971 0 0 17928 0 0 15743 0 0 10592 0 0 18189 0 0 9515.2 0 0 14948 0 0 15848 0 0 14272 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14575000 14575000 0 0 NaN 478 287 872 872 3887 4141 4420 4914 4420 4914 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16864 4420 4914 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16864 4420 4914 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16864 P04049 642 P04049 P04049 RAF proto-oncogene serine/threonine-protein kinase RAF1 sp|P04049|RAF1_HUMAN RAF proto-oncogene serine/threonine-protein kinase OS=Homo sapiens GN=RAF1 PE=1 SV=1 0.985631 18.9148 1.42842E-07 163.41 146.13 163.41 1 S RAAHTEDINACTLTTSPRLPVF_________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX AAHTEDINACT(0.001)LT(0.001)T(0.013)S(0.986)PR AAHT(-103.43)EDINACT(-32.1)LT(-29.49)T(-18.91)S(18.91)PR 15 3 -0.17238 14739 0 0 14176 0 0 14948 0 0 14010 0 0 13973 0 0 13586 0 0 13359 0 0 15149 0 0 12397 0 0 9848.1 0 0 13948 0 0 13391 0 0 15026 0 0 14389 0 0 14228 0 0 13675 0 0 13602 0 0 15432 0 0 12273 0 0 9623.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 63996000 63996000 0 0 NaN 479 288 642 642 37 39 43 53 43 53 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10941 43 53 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10941 43 53 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10941 P04049 259 P04049 P04049 RAF proto-oncogene serine/threonine-protein kinase RAF1 sp|P04049|RAF1_HUMAN RAF proto-oncogene serine/threonine-protein kinase OS=Homo sapiens GN=RAF1 PE=1 SV=1 0.708857 6.93443 2.37752E-08 171.75 139.94 171.75 1 S SPSSEGSLSQRQRSTSTPNVHMVSTTLPVDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.109)T(0.144)S(0.709)T(0.039)PNVHMVSTTLPVDSR S(-8.15)T(-6.93)S(6.93)T(-12.6)PNVHMVS(-95.52)T(-104.56)T(-107.73)LPVDS(-142.66)R 3 3 0.59801 31737 0 0 30520 0 0 34152 0 0 31607 0 0 28473 0 0 37405 0 0 31274 0 0 38676 0 0 34055 0 0 66339 0 0 30041 0 0 28837 0 0 34186 0 0 32480 0 0 29272 0 0 37375 0 0 31776 0 0 40745 0 0 33484 0 0 63361 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 121720000 121720000 0 0 NaN 480 288 259 259 4533 4833;4834 5150;5151 5719;5720 5151 5720 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15239 5151 5720 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15239 5151 5720 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15239 P04075 309 P04075 P04075 Fructose-bisphosphate aldolase A ALDOA sp|P04075|ALDOA_HUMAN Fructose-bisphosphate aldolase A OS=Homo sapiens GN=ALDOA PE=1 SV=2 1 84.687 0.0107437 84.687 13.466 84.687 1 S KPWALTFSYGRALQASALKAWGGKKENLKAA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX ALQAS(1)ALK ALQAS(84.69)ALK 5 2 -0.63585 14085 0 0 17466 0 0 13965 0 0 17128 0 0 21069 0 0 12537 0 0 20501 0 0 15103 0 0 15931 0 0 10267 0 0 13328 0 0 16497 0 0 14155 0 0 17533 0 0 20949 0 0 12823 0 0 20771 0 0 15359 0 0 15913 0 0 10017 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15396000 15396000 0 0 NaN 481 289 309 309 305 326 347 387 347 387 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14988 347 387 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14988 347 387 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14988 P04083 37 P04083 P04083 Annexin A1 ANXA1 sp|P04083|ANXA1_HUMAN Annexin A1 OS=Homo sapiens GN=ANXA1 PE=1 SV=2 0.976007 18.1066 3.02438E-06 137.4 121.81 137.4 1 S VQTVKSSKGGPGSAVSPYPTFNPSSDVAALH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPPP GGPGS(0.015)AVS(0.976)PY(0.003)PT(0.006)FNPSSDVAALHK GGPGS(-18.11)AVS(18.11)PY(-24.83)PT(-22.34)FNPS(-80.52)S(-83.62)DVAALHK 8 3 -1.5424 2921.2 0 0 4795.1 0 0 3506 0 0 5540.7 0 0 3240.1 0 0 2636.3 0 0 2894.7 0 0 5409.5 0 0 6363 0 0 19801 0 0 2766.4 0 0 4534 0 0 3492.8 0 0 5596.8 0 0 3302.1 0 0 2844.2 0 0 3058.1 0 0 5915.3 0 0 6131.3 0 0 18771 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11527000 11527000 0 0 NaN 482 290 37 37 1443 1520 1630 1800 1630 1800 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18797 1630 1800 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18797 1630 1800 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18797 P04183 13 P04183 P04183 Thymidine kinase, cytosolic TK1 sp|P04183|KITH_HUMAN Thymidine kinase, cytosolic OS=Homo sapiens GN=TK1 PE=1 SV=2 0.98497 18.167 2.72133E-07 109.89 88.434 109.89 1 S ___MSCINLPTVLPGSPSKTRGQIQVILGPM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX SCINLPTVLPGS(0.985)PS(0.015)K S(-88.43)CINLPT(-50.61)VLPGS(18.17)PS(-18.17)K 12 3 -0.49558 6789.5 0 0 10111 0 0 7227.4 0 0 8866.9 0 0 6901.9 0 0 7275.4 0 0 7046.3 0 0 8543.1 0 0 9654.3 0 0 12352 0 0 6426.3 0 0 9544.4 0 0 7248.7 0 0 9154.6 0 0 7027.8 0 0 7402.7 0 0 7237 0 0 8892.4 0 0 9415.3 0 0 11829 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 592780000 592780000 0 0 NaN 483 292 13 13 3641 3871 4125 4583;4584 4125 4583 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22103 4125 4583 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22103 4125 4583 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22103 P04406 210 P04406 P04406 Glyceraldehyde-3-phosphate dehydrogenase GAPDH sp|P04406|G3P_HUMAN Glyceraldehyde-3-phosphate dehydrogenase OS=Homo sapiens GN=GAPDH PE=1 SV=3 0.760167 5.01 0.0387111 47.726 31.836 47.726 1 S LWRDGRGALQNIIPASTGAAKAVGKVIPELN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPXXXXXXXXXX GALQNIIPAS(0.76)T(0.24)GAAK GALQNIIPAS(5.01)T(-5.01)GAAK 10 3 -1.4001 4924.8 0 0 5662.1 0 0 5315.4 0 0 5733.6 0 0 6890.6 0 0 6285.3 0 0 6613.5 0 0 6422.4 0 0 6699.8 0 0 6272.9 0 0 4661.5 0 0 5349.2 0 0 5348.6 0 0 5891.6 0 0 6895.7 0 0 6289 0 0 6747.6 0 0 6625.8 0 0 6607 0 0 6055.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12926000 12926000 0 0 NaN 484 293 210 210 1365 1439 1547 1710 1547 1710 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18583 1547 1710 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18583 1547 1710 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18583 P04792 15 P04792 P04792 Heat shock protein beta-1 HSPB1 sp|P04792|HSPB1_HUMAN Heat shock protein beta-1 OS=Homo sapiens GN=HSPB1 PE=1 SV=2 1 94.6921 0.0052404 94.692 72.699 94.692 1 S _MTERRVPFSLLRGPSWDPFRDWYPHSRLFD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX GPS(1)WDPFR GPS(94.69)WDPFR 3 2 0.096298 12847 0 0 13361 0 0 12070 0 0 12373 0 0 4577.6 0 0 11927 0 0 4544.3 0 0 10254 0 0 13874 0 0 7955.5 0 0 12154 0 0 12616 0 0 12107 0 0 12757 0 0 5096.1 0 0 11969 0 0 4882.8 0 0 10590 0 0 13294 0 0 7728.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 90401000 90401000 0 0 NaN 485 294 15 15 1569 1653 1787 1985 1787 1985 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20545 1787 1985 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20545 1787 1985 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20545 P04792 82 P04792 P04792 Heat shock protein beta-1 HSPB1 sp|P04792|HSPB1_HUMAN Heat shock protein beta-1 OS=Homo sapiens GN=HSPB1 PE=1 SV=2 0.577701 4.05333 1.18664E-07 174.94 111.52 174.94 1 S AVAAPAYSRALSRQLSSGVSEIRHTADRWRV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX QLS(0.578)S(0.227)GVS(0.195)EIR QLS(4.05)S(-4.05)GVS(-4.71)EIR 3 2 -0.33558 99269 0 0 69359 0 0 100350 0 0 66504 0 0 8091.9 0 0 87501 0 0 12462 0 0 58199 0 0 73158 0 0 3177.5 0 0 93938 0 0 65505 0 0 99866 0 0 68796 0 0 13778 0 0 86408 0 0 14138 0 0 59609 0 0 69611 0 0 4338.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5863600000 5863600000 0 0 NaN 486 294 82 82 3079 3265 3493 3869 3493 3869 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12657 3493 3869 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12657 3493 3869 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12657 Q99878;Q96KK5;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908 123;123;123;123;123;123;123;123 Q99878 Q99878 Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E HIST1H2AJ;HIST1H2AH;HIST1H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB sp|Q99878|H2A1J_HUMAN Histone H2A type 1-J OS=Homo sapiens GN=HIST1H2AJ PE=1 SV=3;sp|Q96KK5|H2A1H_HUMAN Histone H2A type 1-H OS=Homo sapiens GN=HIST1H2AH PE=1 SV=3;sp|Q93077|H2A1C_HUMAN Histone H2A type 1-C OS=Homo sapiens GN=HIST1H2AC PE=1 SV=3;sp|Q7L7L0| 0.5 0 0.0260108 47.261 20.663 47.261 1 S VLPNIQAVLLPKKTESHHKTK__________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KT(0.5)ES(0.5)HHK KT(0)ES(0)HHK 4 4 0.88906 12487 0 0 9448.8 0 0 11864 0 0 10499 0 0 8079.5 0 0 11700 0 0 7442.2 0 0 10656 0 0 10469 0 0 4834.1 0 0 11814 0 0 8931.9 0 0 11935 0 0 10735 0 0 8416.4 0 0 11670 0 0 7689 0 0 10874 0 0 10201 0 0 4798.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6518000 6518000 0 0 NaN 487 296 123 123 2245 2373 2554 2851 2554 2851 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5225 2554 2851 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5225 2554 2851 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5225 P04920 144 P04920 P04920 Anion exchange protein 2 SLC4A2 sp|P04920|B3A2_HUMAN Anion exchange protein 2 OS=Homo sapiens GN=SLC4A2 PE=1 SV=4 0.963909 15.8202 9.4346E-09 173.95 151.32 173.95 1 S DEASEAEGARALTQPSPVSTPSSVQFFLQED X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP ALT(0.025)QPS(0.964)PVS(0.01)TPSSVQFFLQEDDSADR ALT(-15.82)QPS(15.82)PVS(-19.69)T(-32.86)PS(-63.01)S(-71.28)VQFFLQEDDS(-155.85)ADR 6 3 0.01281 8689.7 0 0 10160 0 0 7712.8 0 0 9805.2 0 0 9613.7 0 0 7498.2 0 0 8550.6 0 0 11793 0 0 9369.4 0 0 82106 0 0 8219.1 0 0 9595.7 0 0 7843.8 0 0 10052 0 0 9629.5 0 0 7827.3 0 0 8777.3 0 0 14137 0 0 9210.1 0 0 77586 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 13747000 13747000 0 0 NaN 488 297 144 144 323 344 369 409;410 369 409 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22846 369 409 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22846 369 409 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22846 P04921 121 P04921 P04921 Glycophorin-C GYPC sp|P04921|GLPC_HUMAN Glycophorin-C OS=Homo sapiens GN=GYPC PE=1 SV=1 0.5 0 8.92091E-13 209.42 175.86 209.42 1 S DAALQGDPALQDAGDSSRKEYFI________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPXXXXXXXX GTEFAESADAALQGDPALQDAGDS(0.5)S(0.5)RKEYFI GT(-195.75)EFAES(-174.4)ADAALQGDPALQDAGDS(0)S(0)RKEY(-99.98)FI 24 4 0.020288 4621 0 0 5995.9 0 0 4070.7 0 0 5882.2 0 0 5628.2 0 0 4007.9 0 0 6953.8 0 0 6402.8 0 0 5192.2 0 0 112200 0 0 4370.6 0 0 5663.5 0 0 4152.2 0 0 6016.5 0 0 5636.6 0 0 4342.3 0 0 6966.5 0 0 9710.6 0 0 5197.8 0 0 105800 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 73445000 73445000 0 0 NaN 489 298 121 121 1654 1745 1886 2104 1886 2104 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22996 1886 2104 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22996 1886 2104 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22996 P04921 122 P04921 P04921 Glycophorin-C GYPC sp|P04921|GLPC_HUMAN Glycophorin-C OS=Homo sapiens GN=GYPC PE=1 SV=1 0.5 0 8.92091E-13 209.42 175.86 209.42 1 S AALQGDPALQDAGDSSRKEYFI_________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GTEFAESADAALQGDPALQDAGDS(0.5)S(0.5)RKEYFI GT(-195.75)EFAES(-174.4)ADAALQGDPALQDAGDS(0)S(0)RKEY(-99.98)FI 25 4 0.020288 4621 0 0 5995.9 0 0 4070.7 0 0 5882.2 0 0 5628.2 0 0 4007.9 0 0 6953.8 0 0 6402.8 0 0 5192.2 0 0 112200 0 0 4370.6 0 0 5663.5 0 0 4152.2 0 0 6016.5 0 0 5636.6 0 0 4342.3 0 0 6966.5 0 0 9710.6 0 0 5197.8 0 0 105800 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 73445000 73445000 0 0 NaN 490 298 122 122 1654 1745 1886 2104 1886 2104 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22996 1886 2104 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22996 1886 2104 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22996 P05114 7 P05114 P05114 Non-histone chromosomal protein HMG-14 HMGN1 sp|P05114|HMGN1_HUMAN Non-histone chromosomal protein HMG-14 OS=Homo sapiens GN=HMGN1 PE=1 SV=3 0.952505 13.0222 0.00263716 97.271 72.733 97.271 1 S _________MPKRKVSSAEGAAKEEPKRRSA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX KVS(0.953)S(0.047)AEGAAKEEPK KVS(13.02)S(-13.02)AEGAAKEEPK 3 3 -0.40121 16895 0 0 11035 0 0 14699 0 0 9491.3 0 0 30438 0 0 17149 0 0 29608 0 0 18641 0 0 10007 0 0 7268.7 0 0 15978 0 0 10415 0 0 15119 0 0 9962.6 0 0 29929 0 0 16880 0 0 29642 0 0 18860 0 0 10705 0 0 7275.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11829000 11829000 0 0 NaN 491 299 7 7 2267;2268 2396;2397 2580 2883 2580 2883 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10299 2580 2883 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10299 2580 2883 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10299 P05114 8 P05114 P05114 Non-histone chromosomal protein HMG-14 HMGN1 sp|P05114|HMGN1_HUMAN Non-histone chromosomal protein HMG-14 OS=Homo sapiens GN=HMGN1 PE=1 SV=3 0.643706 2.56879 0.000226437 111.64 71.859 111.64 1 S ________MPKRKVSSAEGAAKEEPKRRSAR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX KVS(0.356)S(0.644)AEGAAK KVS(-2.57)S(2.57)AEGAAK 4 3 0.18565 21322 0 0 16434 0 0 21440 0 0 17937 0 0 29910 0 0 25373 0 0 29420 0 0 23761 0 0 15260 0 0 2404.2 0 0 20177 0 0 15533 0 0 21685 0 0 18445 0 0 29832 0 0 25085 0 0 29583 0 0 23969 0 0 15658 0 0 2813.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20276000 20276000 0 0 NaN 492 299 8 8 2267;2268 2396;2397 2579 2882 2579 2882 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8799 2579 2882 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8799 2579 2882 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8799 P05114 25 P05114 P05114 Non-histone chromosomal protein HMG-14 HMGN1 sp|P05114|HMGN1_HUMAN Non-histone chromosomal protein HMG-14 OS=Homo sapiens GN=HMGN1 PE=1 SV=3 1 48.4418 0.0322567 48.442 28.608 48.442 1 S EGAAKEEPKRRSARLSAKPPAKVEAKPKKAA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPXXXXXXXXX LS(1)AKPPAK LS(48.44)AKPPAK 2 3 0.97929 16506 0 0 13024 0 0 15000 0 0 11815 0 0 14627 0 0 15919 0 0 12381 0 0 13924 0 0 13824 0 0 2279.2 0 0 15614 0 0 12296 0 0 15182 0 0 12271 0 0 14835 0 0 15752 0 0 12750 0 0 14112 0 0 13579 0 0 2468.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12670000 12670000 0 0 NaN 493 299 25 25 2546 2690 2887 3219 2887 3219 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11833 2887 3219 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11833 2887 3219 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11833 P05114 86 P05114 P05114 Non-histone chromosomal protein HMG-14 HMGN1 sp|P05114|HMGN1_HUMAN Non-histone chromosomal protein HMG-14 OS=Homo sapiens GN=HMGN1 PE=1 SV=3 0.999962 44.1875 8.72069E-16 225.86 215.11 225.86 1 S KEDLPAENGETKTEESPASDEAGEKEAKSD_ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX TEES(1)PASDEAGEK T(-67.34)EES(44.19)PAS(-44.19)DEAGEK 4 2 -0.1483 6088.5 0 0 9201 0 0 7211.7 0 0 7183.4 0 0 9885 0 0 6838.2 0 0 10622 0 0 8203.5 0 0 8207 0 0 2585.2 0 0 5765.4 0 0 8680.3 0 0 7231.3 0 0 7493.2 0 0 9881.6 0 0 6891.6 0 0 10711 0 0 8253.7 0 0 8200.3 0 0 2624.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5864100 5864100 0 0 NaN 494 299 86 86 4680 4991 5316 5908 5316 5908 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8217 5316 5908 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8217 5316 5908 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8217 P05386;P05387 101;102 P05386;P05387 P05387 60S acidic ribosomal protein P1;60S acidic ribosomal protein P2 RPLP1;RPLP2 sp|P05386|RLA1_HUMAN 60S acidic ribosomal protein P1 OS=Homo sapiens GN=RPLP1 PE=1 SV=1;sp|P05387|RLA2_HUMAN 60S acidic ribosomal protein P2 OS=Homo sapiens GN=RPLP2 PE=1 SV=1 0.976847 16.2522 2.54574E-06 137.72 123.98 137.72 1 S AAPAEEKKVEAKKEESEESDDDMGFGLFD__;APAAAEEKKDEKKEESEESDDDMGFGLFD__ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPXX KEES(0.977)EES(0.023)DDDMGFGLFD KEES(16.25)EES(-16.25)DDDMGFGLFD 4 3 2.2456 4176.6 0 0 4493.9 0 0 5445.9 0 0 5076.4 0 0 4525.5 0 0 5366.7 0 0 5949.2 0 0 5776.1 0 0 4865.2 0 0 35408 0 0 3956.9 0 0 4248.5 0 0 5402.1 0 0 5181.4 0 0 4665.9 0 0 5438.2 0 0 5957.8 0 0 6844.9 0 0 4846.4 0 0 33474 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6464600 6464600 0 0 NaN 495 301;302 101;102 102 2039 2157;2158 2324 2591 2324 2591 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20922 2324 2591 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20922 2324 2591 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20922 P05386;P05387 104;105 P05386;P05387 P05387 60S acidic ribosomal protein P1;60S acidic ribosomal protein P2 RPLP1;RPLP2 sp|P05386|RLA1_HUMAN 60S acidic ribosomal protein P1 OS=Homo sapiens GN=RPLP1 PE=1 SV=1;sp|P05387|RLA2_HUMAN 60S acidic ribosomal protein P2 OS=Homo sapiens GN=RPLP2 PE=1 SV=1 0.962157 14.0526 1.03104E-15 227.41 202.19 227.41 1 S AAEEKKDEKKEESEESDDDMGFGLFD_____;AEEKKVEAKKEESEESDDDMGFGLFD_____ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPXXXXX KEES(0.038)EES(0.962)DDDMGFGLFD KEES(-14.05)EES(14.05)DDDMGFGLFD 7 2 -0.84012 6187.1 0 0 7922 0 0 7151.6 0 0 5981.1 0 0 9247.2 0 0 6182.6 0 0 7979.3 0 0 11530 0 0 7582.7 0 0 189800 0 0 5858.2 0 0 7472.6 0 0 7169 0 0 6262.9 0 0 9242.1 0 0 6612.6 0 0 8172.3 0 0 17077 0 0 7498.6 0 0 178990 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 42507000 42507000 0 0 NaN 496 301;302 104;105 105 2039 2157;2158 2325 2592 2325 2592 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23379 2325 2592 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23379 2325 2592 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23379 P05387 79 P05387 P05387 60S acidic ribosomal protein P2 RPLP2 sp|P05387|RLA2_HUMAN 60S acidic ribosomal protein P2 OS=Homo sapiens GN=RPLP2 PE=1 SV=1 0.98447 18.6147 0.00617647 75.343 66.375 75.343 1 S SVPAGGAVAVSAAPGSAAPAAGSAPAAAEEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP LASVPAGGAVAVS(0.002)AAPGS(0.984)AAPAAGS(0.014)APAAAEEK LAS(-56.59)VPAGGAVAVS(-26.96)AAPGS(18.61)AAPAAGS(-18.61)APAAAEEK 18 4 -0.16044 8319.1 0 0 10683 0 0 9808 0 0 14449 0 0 7633 0 0 10563 0 0 8556 0 0 10923 0 0 12378 0 0 23435 0 0 7877.6 0 0 10113 0 0 9765.6 0 0 14544 0 0 7891 0 0 10810 0 0 8769.6 0 0 11649 0 0 12051 0 0 22320 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 43364000 43364000 0 0 NaN 497 302 79 79 2300 2429 2618 2926 2618 2926 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17413 2618 2926 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17413 2618 2926 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17413 P05387 17 P05387 P05387 60S acidic ribosomal protein P2 RPLP2 sp|P05387|RLA2_HUMAN 60S acidic ribosomal protein P2 OS=Homo sapiens GN=RPLP2 PE=1 SV=1 0.930387 13.1759 6.61604E-08 162.82 145.6 162.82 1 S RYVASYLLAALGGNSSPSAKDIKKILDSVGI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX YVASYLLAALGGNS(0.045)S(0.93)PS(0.025)AK Y(-141.22)VAS(-141.02)Y(-135.86)LLAALGGNS(-13.18)S(13.18)PS(-15.74)AK 15 4 0.38647 4612 0 0 11055 0 0 5033.9 0 0 8315 0 0 4502.5 0 0 6381.2 0 0 7458.8 0 0 8408.7 0 0 11386 0 0 4494.6 0 0 4365.7 0 0 10428 0 0 5043.7 0 0 8673.7 0 0 4646.1 0 0 6516.4 0 0 7558 0 0 8491.4 0 0 11068 0 0 4426.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 84606000 84606000 0 0 NaN 498 302 17 17 5452 5808 6202 6904 6202 6904 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24101 6202 6904 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24101 6202 6904 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24101 Q8NHW5;P05388 304;304 Q8NHW5 Q8NHW5 60S acidic ribosomal protein P0-like;60S acidic ribosomal protein P0 RPLP0P6;RPLP0 sp|Q8NHW5|RLA0L_HUMAN 60S acidic ribosomal protein P0-like OS=Homo sapiens GN=RPLP0P6 PE=5 SV=1;sp|P05388|RLA0_HUMAN 60S acidic ribosomal protein P0 OS=Homo sapiens GN=RPLP0 PE=1 SV=1 0.754269 4.87066 1.18199E-07 160.67 145.08 160.67 1 S PAAAAAPAKVEAKEESEESDEDMGFGLFD__ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPPXX VEAKEES(0.754)EES(0.246)DEDMGFGLFD VEAKEES(4.87)EES(-4.87)DEDMGFGLFD 7 3 0.413 3408.5 0 0 3322.7 0 0 3098.2 0 0 3645.7 0 0 3662.9 0 0 3496.7 0 0 2908 0 0 3750.7 0 0 3349.3 0 0 37975 0 0 3224.1 0 0 3140.7 0 0 3143 0 0 3721.2 0 0 3673.5 0 0 3586.3 0 0 3008.4 0 0 4896.7 0 0 3286 0 0 35845 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8417800 8417800 0 0 NaN 499 303 304 304 5084 5419 5771 6413 5771 6413 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21858 5771 6413 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21858 5771 6413 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21858 P05412;P17535 73;100 P05412 P05412 Transcription factor AP-1;Transcription factor jun-D JUN;JUND sp|P05412|JUN_HUMAN Transcription factor AP-1 OS=Homo sapiens GN=JUN PE=1 SV=2;sp|P17535|JUND_HUMAN Transcription factor jun-D OS=Homo sapiens GN=JUND PE=1 SV=3 1 82.4167 0.0119925 82.417 54.212 82.417 1 S SDLLTSPDVGLLKLASPELERLIIQSSNGHI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX LAS(1)PELER LAS(82.42)PELER 3 2 -0.58709 20984 0 0 42562 0 0 22424 0 0 41590 0 0 19663 0 0 23105 0 0 19301 0 0 27672 0 0 48047 0 0 5840.1 0 0 19862 0 0 40202 0 0 22463 0 0 42466 0 0 20140 0 0 24053 0 0 20452 0 0 27756 0 0 46189 0 0 6139.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 61572000 61572000 0 0 NaN 500 304 73 73 2294 2423 2607 2913 2607 2913 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12843 2607 2913 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12843 2607 2913 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12843 P05455 366 P05455 P05455 Lupus La protein SSB sp|P05455|LA_HUMAN Lupus La protein OS=Homo sapiens GN=SSB PE=1 SV=2 1 115.4 2.1725E-16 219.34 189.1 219.34 1 S GKGKVQFQGKKTKFASDDEHDEHDENGATGP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP FAS(1)DDEHDEHDENGATGPVKR FAS(115.4)DDEHDEHDENGAT(-115.4)GPVKR 3 4 -0.18296 46507 0 0 65701 0 0 49729 0 0 61396 0 0 55583 0 0 50732 0 0 50212 0 0 54978 0 0 70918 0 0 113670 0 0 44020 0 0 62041 0 0 49950 0 0 63131 0 0 56004 0 0 51595 0 0 51937 0 0 58407 0 0 69096 0 0 108310 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 169120000 169120000 0 0 NaN 501 305 366 366 1239;1240 1304;1305 1404;1405;1406 1556;1557;1558 1405 1557 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8788 1405 1557 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8788 1405 1557 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8788 P05455 92 P05455 P05455 Lupus La protein SSB sp|P05455|LA_HUMAN Lupus La protein OS=Homo sapiens GN=SSB PE=1 SV=2 0.984286 17.9683 8.72155E-08 172.3 134 172.3 1 S AELMEISEDKTKIRRSPSKPLPEVTDEYKND X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.984)PS(0.016)KPLPEVTDEYK S(17.97)PS(-17.97)KPLPEVT(-77.1)DEY(-116.58)K 1 3 1.6568 15995 0 0 51145 0 0 16341 0 0 53727 0 0 20442 0 0 18941 0 0 20675 0 0 33477 0 0 57867 0 0 24622 0 0 15136 0 0 48330 0 0 16485 0 0 54448 0 0 20541 0 0 20766 0 0 22053 0 0 33758 0 0 55520 0 0 23959 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 40878000 40878000 0 0 NaN 502 305 92 92 4175;4176 4450;4451 4743;4744 5262;5263 4743 5262 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15912 4743 5262 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15912 4743 5262 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15912 P05783 51 P05783 P05783 Keratin, type I cytoskeletal 18 KRT18 sp|P05783|K1C18_HUMAN Keratin, type I cytoskeletal 18 OS=Homo sapiens GN=KRT18 PE=1 SV=2 0.315985 0 1.36169E-34 294.98 270.52 294.98 S YAGAGGSGSRISVSRSTSFRGGMGSGGLATG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.316)T(0.316)S(0.316)FRGGMGS(0.052)GGLATGIAGGLAGMGGIQNEK S(0)T(0)S(0)FRGGMGS(-7.83)GGLAT(-48.38)GIAGGLAGMGGIQNEK 1 4 -1.1226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 503 307 51 51 4518 4815;4816;4817 5132 5700 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21711 5132 5700 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21711 5132 5700 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21711 P05783 53 P05783 P05783 Keratin, type I cytoskeletal 18 KRT18 sp|P05783|K1C18_HUMAN Keratin, type I cytoskeletal 18 OS=Homo sapiens GN=KRT18 PE=1 SV=2 0.315985 0 1.36169E-34 294.98 270.52 294.98 S GAGGSGSRISVSRSTSFRGGMGSGGLATGIA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.316)T(0.316)S(0.316)FRGGMGS(0.052)GGLATGIAGGLAGMGGIQNEK S(0)T(0)S(0)FRGGMGS(-7.83)GGLAT(-48.38)GIAGGLAGMGGIQNEK 3 4 -1.1226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 504 307 53 53 4518 4815;4816;4817 5132 5700 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21711 5132 5700 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21711 5132 5700 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21711 P05783 60 P05783 P05783 Keratin, type I cytoskeletal 18 KRT18 sp|P05783|K1C18_HUMAN Keratin, type I cytoskeletal 18 OS=Homo sapiens GN=KRT18 PE=1 SV=2 0.484159 4.23632 5.97063E-12 193.77 152.56 193.77 S RISVSRSTSFRGGMGSGGLATGIAGGLAGMG X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X XXXXXXPPPPPPPPPPPPPPPPPPPPPPPPP S(0.183)T(0.183)S(0.151)FRGGMGS(0.484)GGLATGIAGGLAGMGGIQNEK S(-4.24)T(-4.24)S(-5.07)FRGGMGS(4.24)GGLAT(-42.53)GIAGGLAGMGGIQNEK 10 4 0.62175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 505 307 60 60 4518 4815;4816;4817 5128 5694 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17698 5128 5694 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17698 5128 5694 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17698 P06132 61 P06132 P06132 Uroporphyrinogen decarboxylase UROD sp|P06132|DCUP_HUMAN Uroporphyrinogen decarboxylase OS=Homo sapiens GN=UROD PE=1 SV=2 0.805883 9.19275 0.0132468 66.677 47.299 66.677 1 S FRETRAAQDFFSTCRSPEACCELTLQPLRRF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPPPPPXX AAQDFFS(0.097)T(0.097)CRS(0.806)PEACCELTLQPLR AAQDFFS(-9.19)T(-9.19)CRS(9.19)PEACCELT(-47.04)LQPLR 11 3 -1.4026 2171.8 0 0 4060.8 0 0 2051.6 0 0 4706.1 0 0 3651.5 0 0 2842.6 0 0 3889.3 0 0 4218.2 0 0 3384 0 0 45446 0 0 2054.6 0 0 3839.7 0 0 2092.8 0 0 4762.7 0 0 3614 0 0 3035.3 0 0 3933.7 0 0 5547.2 0 0 3360.4 0 0 42891 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10543000 10543000 0 0 NaN 506 308 61 61 56 60 65 77 65 77 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21074 65 77 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21074 65 77 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21074 P06400 807 P06400 P06400 Retinoblastoma-associated protein RB1 sp|P06400|RB_HUMAN Retinoblastoma-associated protein OS=Homo sapiens GN=RB1 PE=1 SV=2 0.999915 40.7133 5.3478E-07 142.85 120.02 101.2 1 S FPSSPLRIPGGNIYISPLKSPYKISEGLPTP X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXPPPPPPPPPPPPPPPPXXXXXXXX IPGGNIYIS(1)PLK IPGGNIY(-40.71)IS(40.71)PLK 9 3 0.39909 49579 0 0 16214 0 0 55609 0 0 16584 0 0 15182 0 0 53903 0 0 14174 0 0 32602 0 0 17343 0 0 20907 0 0 46937 0 0 15318 0 0 55151 0 0 17605 0 0 17783 0 0 52136 0 0 14563 0 0 34158 0 0 16978 0 0 20441 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 200340000 200340000 0 0 NaN 507 310 807 807 1906;1907 2013;2014 2174;2175 2434;2435 2174 2434 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21276 2175 2435 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20684 2175 2435 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20684 P06400 788 P06400 P06400 Retinoblastoma-associated protein RB1 sp|P06400|RB_HUMAN Retinoblastoma-associated protein OS=Homo sapiens GN=RB1 PE=1 SV=2 0.999928 41.505 0.000142145 112.16 62.677 112.16 1;2 S STRPPTLSPIPHIPRSPYKFPSSPLRIPGGN X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPXXXXX S(1)PYKFPS(0.011)S(0.989)PLR S(41.5)PY(-41.5)KFPS(-19.72)S(19.72)PLR 1 3 -0.14137 32885 13577 0 16658 14595 0 35447 14779 0 14859 11882 0 7768.7 3092.2 0 38380 14387 0 8070.6 3743.7 0 19811 12654 0 15672 14573 0 4481.5 5752.6 0 31127 12852 0 15726 13772 0 35208 14671 0 15745 12406 0 9529.4 3847.5 0 37196 14298 0 8408.8 4076.1 0 20726 12933 0 15141 13920 0 4678.4 5709.6 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 110880000 67982000 42896000 0 NaN 508 310 788 788 4213 4490;4491 4785;4786 5311;5312 4786 5312 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16681 4786 5312 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16681 4786 5312 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16681 P06400 795 P06400 P06400 Retinoblastoma-associated protein RB1 sp|P06400|RB_HUMAN Retinoblastoma-associated protein OS=Homo sapiens GN=RB1 PE=1 SV=2 0.989446 19.72 0.000142145 112.16 62.677 112.16 1;2 S SPIPHIPRSPYKFPSSPLRIPGGNIYISPLK Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX S(1)PYKFPS(0.011)S(0.989)PLR S(41.5)PY(-41.5)KFPS(-19.72)S(19.72)PLR 8 3 -0.14137 21786 13577 0 11442 14595 0 22741 14779 0 11080 11882 0 5740.2 3092.2 0 21996 14387 0 4993.7 3743.7 0 13086 12654 0 12110 14573 0 2801.9 5752.6 0 20618 12852 0 10807 13772 0 22634 14671 0 11574 12406 0 6825.2 3847.5 0 21454 14298 0 5313.9 4076.1 0 13556 12933 0 11647 13920 0 2941.2 5709.6 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 81989000 39093000 42896000 0 NaN 509 310 795 795 4213 4490;4491 4784;4786 5310;5312 4786 5312 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16681 4786 5312 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16681 4786 5312 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16681 P06400 249 P06400 P06400 Retinoblastoma-associated protein RB1 sp|P06400|RB_HUMAN Retinoblastoma-associated protein OS=Homo sapiens GN=RB1 PE=1 SV=2 1 125.988 4.77483E-10 185.99 161.21 185.99 1 S LLKEPYKTAVIPINGSPRTPRRGQNRSARIA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX TAVIPINGS(1)PR T(-125.99)AVIPINGS(125.99)PR 9 2 0.32548 88464 0 0 48848 0 0 85985 0 0 48546 0 0 50578 0 0 81037 0 0 54680 0 0 61416 0 0 49287 0 0 7163.6 0 0 83701 0 0 46143 0 0 86298 0 0 50386 0 0 53470 0 0 79544 0 0 55315 0 0 62581 0 0 48860 0 0 8166.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 322460000 322460000 0 0 NaN 510 310 249 249 4645 4956 5280 5866 5280 5866 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14681 5280 5866 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14681 5280 5866 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14681 P06400 780 P06400 P06400 Retinoblastoma-associated protein RB1 sp|P06400|RB_HUMAN Retinoblastoma-associated protein OS=Homo sapiens GN=RB1 PE=1 SV=2 0.982132 17.4495 5.49024E-08 155.15 131.92 155.15 1 S KTNILQYASTRPPTLSPIPHIPRSPYKFPSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY) XPPPPPPPPPPPPPPPPPPPPPPXXXXXXXX TNILQYASTRPPT(0.018)LS(0.982)PIPHIPR T(-109)NILQY(-103.68)AS(-42.35)T(-38.43)RPPT(-17.45)LS(17.45)PIPHIPR 15 4 -0.41184 5250.8 0 0 6991.3 0 0 5806.1 0 0 5242.2 0 0 4686.3 0 0 5253 0 0 4263.3 0 0 6258.5 0 0 6660.2 0 0 7546.5 0 0 4970.7 0 0 6594.4 0 0 5800 0 0 5489.4 0 0 4818 0 0 5291.7 0 0 4425.6 0 0 6466.1 0 0 6470 0 0 7250.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 80986000 80986000 0 0 NaN 511 310 780 780 4803 5123 5462 6078 5462 6078 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20773 5462 6078 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20773 5462 6078 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20773 P06400 624 P06400 P06400 Retinoblastoma-associated protein RB1 sp|P06400|RB_HUMAN Retinoblastoma-associated protein OS=Homo sapiens GN=RB1 PE=1 SV=2 0.808538 6.25619 6.66046E-12 195.38 168.57 195.38 1 S PVRSPKKKGSTTRVNSTANAETQATSAFQTQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP VNS(0.809)T(0.191)ANAETQATSAFQTQKPLK VNS(6.26)T(-6.26)ANAET(-87.8)QAT(-132.24)S(-137.64)AFQT(-162.6)QKPLK 3 4 -0.43329 25399 0 0 14070 0 0 26334 0 0 16341 0 0 14503 0 0 29228 0 0 13450 0 0 21735 0 0 16556 0 0 23780 0 0 24038 0 0 13304 0 0 26316 0 0 16846 0 0 15404 0 0 28673 0 0 13827 0 0 22809 0 0 16204 0 0 22895 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 38909000 38909000 0 0 NaN 512 310 624 624 5196 5539 5903 6559;6560 5903 6559 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16536 5903 6559 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16536 5903 6559 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16536 P06454 2 P06454 P06454 Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 PTMA sp|P06454|PTMA_HUMAN Prothymosin alpha OS=Homo sapiens GN=PTMA PE=1 SV=2 0.99817 30.5731 9.45241E-23 149.96 128.33 149.96 1 S ______________MSDAAVDTSSEITTKDL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPXX S(0.998)DAAVDT(0.001)S(0.001)SEITTK S(30.57)DAAVDT(-30.57)S(-30.57)S(-40.96)EIT(-69.05)T(-77.28)K 1 2 0.11863 102240 0 0 68313 0 0 95388 0 0 64994 0 0 133490 0 0 104480 0 0 131430 0 0 96115 0 0 67051 0 0 161270 0 0 96720 0 0 64514 0 0 96907 0 0 67571 0 0 133130 0 0 103160 0 0 132120 0 0 101590 0 0 68890 0 0 154080 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 810470000 810470000 0 0 2.1695 513 311 2 2 3653 3884 4139 4599;4600;4601;4602 4139 4600 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13855 4139 4600 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13855 4139 4600 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13855 P06454 9 P06454 P06454 Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 PTMA sp|P06454|PTMA_HUMAN Prothymosin alpha OS=Homo sapiens GN=PTMA PE=1 SV=2 0.703307 5.26693 5.96427E-16 138.31 124.73 138.31 1 S _______MSDAAVDTSSEITTKDLKEKKEVV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPXXXXXXXXX SDAAVDT(0.209)S(0.703)S(0.086)EIT(0.002)TK S(-48.58)DAAVDT(-5.27)S(5.27)S(-9.14)EIT(-26.65)T(-35.01)K 8 2 0.55752 27696 0 0 23876 0 0 28373 0 0 24528 0 0 34272 0 0 28775 0 0 37377 0 0 30142 0 0 24201 0 0 22670 0 0 26210 0 0 22558 0 0 28609 0 0 25213 0 0 34463 0 0 28713 0 0 37537 0 0 30864 0 0 24438 0 0 22044 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 265320000 265320000 0 0 0.71023 514 311 9 9 3653 3884 4138 4597;4598 4138 4597 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12969 4138 4597 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12969 4138 4597 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12969 P06576 465 P06576 P06576 ATP synthase subunit beta, mitochondrial ATP5B sp|P06576|ATPB_HUMAN ATP synthase subunit beta, mitochondrial OS=Homo sapiens GN=ATP5B PE=1 SV=3 1 138.465 1.65037E-31 310.8 289.14 310.8 1 S DKLTVSRARKIQRFLSQPFQVAEVFTGHMGK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP FLS(1)QPFQVAEVFTGHMGK FLS(138.46)QPFQVAEVFT(-138.46)GHMGK 3 3 -0.38805 103980 0 0 38533 0 0 106830 0 0 42301 0 0 136520 0 0 97414 0 0 137260 0 0 94376 0 0 47056 0 0 171980 0 0 98406 0 0 36423 0 0 107770 0 0 44089 0 0 136720 0 0 95469 0 0 137210 0 0 99966 0 0 50256 0 0 164120 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 336120000 336120000 0 0 NaN 515 313 465 465 1292 1362;1363 1465;1466 1625;1626 1466 1626 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23955 1466 1626 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23955 1466 1626 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23955 P06733 419 P06733 P06733 Alpha-enolase ENO1 sp|P06733|ENOA_HUMAN Alpha-enolase OS=Homo sapiens GN=ENO1 PE=1 SV=2 1 88.2818 0.00420545 88.282 40.367 88.282 1 S LAKYNQLLRIEEELGSKAKFAGRNFRNPLAK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX IEEELGS(1)KAK IEEELGS(88.28)KAK 7 3 0.17348 9022.2 0 0 10997 0 0 10047 0 0 10820 0 0 12612 0 0 9196.7 0 0 12282 0 0 11129 0 0 11061 0 0 2890.8 0 0 8541.1 0 0 10387 0 0 10088 0 0 11094 0 0 12641 0 0 9320.4 0 0 12484 0 0 11175 0 0 10966 0 0 2979.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16096000 16096000 0 0 NaN 516 314 419 419 1812 1912 2066 2316 2066 2316 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14767 2066 2316 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14767 2066 2316 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14767 P06748 70 P06748 P06748 Nucleophosmin NPM1 sp|P06748|NPM_HUMAN Nucleophosmin OS=Homo sapiens GN=NPM1 PE=1 SV=2 1 141.948 4.72114E-25 254.33 227.84 254.33 1 S DELHIVEAEAMNYEGSPIKVTLATLKMSVQP X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK T(-234.23)VS(-231.56)LGAGAKDELHIVEAEAMNY(-141.95)EGS(141.95)PIK 25 5 0.61816 35791 0 0 51499 0 0 40580 0 0 51606 0 0 45899 0 0 41948 0 0 55405 0 0 52259 0 0 59132 0 0 104290 0 0 33886 0 0 48650 0 0 40670 0 0 52825 0 0 46402 0 0 42804 0 0 56043 0 0 55163 0 0 58187 0 0 99408 0 0 7 0 0 7 0 0 7 0 0 7 0 0 7 0 0 7 0 0 7 0 0 7 0 0 7 0 0 7 0 0 202020000 202020000 0 0 NaN 517 315 70 70 660;5015 703;704;5346;5347 750;751;5696;5697;5698;5699 830;831;6326;6327;6328;6329;6330 5698 6329 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22975 5698 6329 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22975 5698 6329 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22975 P06748 260 P06748 P06748 Nucleophosmin NPM1 sp|P06748|NPM_HUMAN Nucleophosmin OS=Homo sapiens GN=NPM1 PE=1 SV=2 1 78.5055 0.00715227 78.505 54.674 78.505 1 S EDIKAKMQASIEKGGSLPKVEAKFINYVKNC X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX GGS(1)LPKVEAK GGS(78.51)LPKVEAK 3 3 -0.77244 17168 0 0 33761 0 0 14894 0 0 36451 0 0 21628 0 0 16052 0 0 18258 0 0 23982 0 0 34604 0 0 3816.3 0 0 16237 0 0 31908 0 0 15205 0 0 36935 0 0 21518 0 0 17107 0 0 19195 0 0 23864 0 0 33451 0 0 4148.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 119210000 119210000 0 0 NaN 518 315 260 260 1449 1526 1648 1827 1648 1827 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12803 1648 1827 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12803 1648 1827 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12803 P06748 227 P06748 P06748 Nucleophosmin NPM1 sp|P06748|NPM_HUMAN Nucleophosmin OS=Homo sapiens GN=NPM1 PE=1 SV=2 1 112.235 0.000307493 112.24 83.69 112.24 1 S KDSKPSSTPRSKGQESFKKQEKTPKTPKGPS X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX GQES(1)FKKQEK GQES(112.24)FKKQEK 4 3 -0.24518 156170 0 0 207890 0 0 166220 0 0 187200 0 0 215730 0 0 151260 0 0 240210 0 0 200310 0 0 205460 0 0 16059 0 0 147820 0 0 196270 0 0 167450 0 0 192890 0 0 216310 0 0 153860 0 0 242380 0 0 199510 0 0 204200 0 0 19757 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 714200000 714200000 0 0 NaN 519 315 227 227 1573;1574;3886 1657;1658;4140 1791;1792;4419 1989;1990;4913 1792 1990 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9494 1792 1990 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9494 1792 1990 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9494 P06748 139 P06748 P06748 Nucleophosmin NPM1 sp|P06748|NPM_HUMAN Nucleophosmin OS=Homo sapiens GN=NPM1 PE=1 SV=2 0.999922 41.0522 0.00708776 85.622 63.629 85.622 1 S ESEDEEEEDVKLLSISGKRSAPGGGSKVPQK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX LLSIS(1)GKR LLS(-41.05)IS(41.05)GKR 5 3 -0.15747 8656.6 0 0 16059 0 0 9442.6 0 0 16344 0 0 24962 0 0 7891.1 0 0 26912 0 0 18505 0 0 17807 0 0 1355 0 0 8194.4 0 0 15172 0 0 9656.6 0 0 16628 0 0 24434 0 0 8422.5 0 0 27051 0 0 18192 0 0 17956 0 0 1704.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 40280000 40280000 0 0 NaN 520 315 139 139 2457 2595 2789 3116 2789 3116 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15670 2789 3116 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15670 2789 3116 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15670 P06748 10 P06748 P06748 Nucleophosmin NPM1 sp|P06748|NPM_HUMAN Nucleophosmin OS=Homo sapiens GN=NPM1 PE=1 SV=2 0.980085 16.9317 3.95795E-05 93.147 83 86.48 1 S ______MEDSMDMDMSPLRPQNYLFGCELKA X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;Oxidation (M);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPPPPPX MEDS(0.02)MDMDMS(0.98)PLRPQNYLFGCELK MEDS(-16.93)MDMDMS(16.93)PLRPQNY(-42.96)LFGCELK 10 3 -0.17209 18037 0 0 19471 0 0 21901 0 0 24627 0 0 19065 0 0 19926 0 0 23939 0 0 28455 0 0 25299 0 0 236470 0 0 17082 0 0 18423 0 0 21806 0 0 24896 0 0 19585 0 0 20735 0 0 24171 0 0 35337 0 0 24905 0 0 223320 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 83118000 83118000 0 0 NaN 521 315 10 10 2681 2835;2836 3042;3043 3388;3389 3043 3389 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23956 3042 3388 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23483 3043 3389 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23956 P06748 254 P06748 P06748 Nucleophosmin NPM1 sp|P06748|NPM_HUMAN Nucleophosmin OS=Homo sapiens GN=NPM1 PE=1 SV=2 1 114.894 0.00153669 114.89 56.934 114.89 1 S KGPSSVEDIKAKMQASIEKGGSLPKVEAKFI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX MQAS(1)IEK MQAS(114.89)IEK 4 2 -0.59613 207310 0 0 333120 0 0 213200 0 0 320870 0 0 127320 0 0 218360 0 0 128830 0 0 226580 0 0 347590 0 0 5627.6 0 0 196190 0 0 314620 0 0 213290 0 0 328560 0 0 134500 0 0 223560 0 0 137050 0 0 227130 0 0 333690 0 0 10543 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 349550000 349550000 0 0 NaN 522 315 254 254 2728 2893 3102 3449 3102 3449 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12390 3102 3449 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12390 3102 3449 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12390 P07437;P68371;Q13509;P04350 172;172;172;172 P07437 P07437 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-3 chain;Tubulin beta-4A chain TUBB;TUBB4B;TUBB3;TUBB4A sp|P07437|TBB5_HUMAN Tubulin beta chain OS=Homo sapiens GN=TUBB PE=1 SV=2;sp|P68371|TBB4B_HUMAN Tubulin beta-4B chain OS=Homo sapiens GN=TUBB4B PE=1 SV=1;sp|Q13509|TBB3_HUMAN Tubulin beta-3 chain OS=Homo sapiens GN=TUBB3 PE=1 SV=2;sp|P04350|TBB4A_HUMAN Tub 0.995547 23.5455 0.00844032 76.073 25.949 76.073 1 S EEYPDRIMNTFSVVPSPKVSDTVVEPYNATL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX IMNTFS(0.004)VVPS(0.996)PK IMNT(-42.81)FS(-23.55)VVPS(23.55)PK 10 3 -0.0089417 6105.9 0 0 10213 0 0 6807.5 0 0 9990.8 0 0 12348 0 0 7732.9 0 0 11689 0 0 10156 0 0 11443 0 0 76227 0 0 5780.4 0 0 9646.3 0 0 6881 0 0 10235 0 0 12194 0 0 8025.8 0 0 11924 0 0 12390 0 0 11302 0 0 72012 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 10700000 10700000 0 0 NaN 523 320 172 172 1893 1998 2157 2416;2417 2157 2416 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21915 2157 2416 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21915 2157 2416 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21915 P07737 92 P07737 P07737 Profilin-1 PFN1 sp|P07737|PROF1_HUMAN Profilin-1 OS=Homo sapiens GN=PFN1 PE=1 SV=2 0.796926 6.18858 4.53814E-07 147.87 120.2 147.87 1 S SLLQDGEFSMDLRTKSTGGAPTFNVTVTKTD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX T(0.192)KS(0.797)T(0.011)GGAPTFNVTVTK T(-6.19)KS(6.19)T(-18.45)GGAPT(-52.25)FNVT(-90.83)VT(-113.02)K 3 3 -1.4114 15157 0 0 22834 0 0 14425 0 0 24345 0 0 17640 0 0 16401 0 0 18351 0 0 19027 0 0 25774 0 0 18653 0 0 14340 0 0 21579 0 0 14608 0 0 24777 0 0 17728 0 0 16862 0 0 18849 0 0 19546 0 0 25116 0 0 18005 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14686000 14686000 0 0 NaN 524 321 92 92 4762 5079 5412 6017 5412 6017 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16100 5412 6017 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16100 5412 6017 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16100 P07814 747 P07814 P07814 Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase EPRS sp|P07814|SYEP_HUMAN Bifunctional glutamate/proline--tRNA ligase OS=Homo sapiens GN=EPRS PE=1 SV=5 0.815053 6.50898 3.30361E-18 242.56 215.96 242.56 1 S FKERPTPSLNNNCTTSEDSLVLYNRVAVQGD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPPPPPXXXXXX ERPTPSLNNNCT(0.003)T(0.182)S(0.815)EDSLVLYNR ERPT(-106.4)PS(-89.68)LNNNCT(-24.55)T(-6.51)S(6.51)EDS(-66.97)LVLY(-151.39)NR 14 3 -0.70804 5898.5 0 0 2727 0 0 5888.3 0 0 3406.9 0 0 4134 0 0 6442.8 0 0 4124.5 0 0 4343.9 0 0 3464.5 0 0 10278 0 0 5581.5 0 0 2580 0 0 5908.3 0 0 3505.4 0 0 4298 0 0 6315.5 0 0 4180.7 0 0 4748.3 0 0 3446.4 0 0 9778.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13125000 13125000 0 0 NaN 525 322 747 747 1124 1183 1273 1400 1273 1400 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15195 1273 1400 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15195 1273 1400 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15195 P07814 883 P07814 P07814 Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase EPRS sp|P07814|SYEP_HUMAN Bifunctional glutamate/proline--tRNA ligase OS=Homo sapiens GN=EPRS PE=1 SV=5 0.463086 2.48175 0.0295483 59.429 38.615 59.429 S TGKEYIPGQPPLSQSSDSSPTRNSEPAGLET X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPXXXXXXXXX EYIPGQPPLS(0.268)QS(0.269)S(0.463)DS(0.533)S(0.383)PT(0.083)R EY(-45.32)IPGQPPLS(-2.48)QS(-2.48)S(2.48)DS(1.51)S(-1.51)PT(-8.48)R 13 3 0.28471 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 526 322 883 883 1232;4720 1296;1297;5031 1397 1549 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16243 1397 1549 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16243 1397 1549 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16243 P07814 885 P07814 P07814 Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase EPRS sp|P07814|SYEP_HUMAN Bifunctional glutamate/proline--tRNA ligase OS=Homo sapiens GN=EPRS PE=1 SV=5 0.602721 1.83238 1.4234E-22 257.72 198.45 257.72 1;2 S KEYIPGQPPLSQSSDSSPTRNSEPAGLETPE X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX EYIPGQPPLSQSS(0.002)DS(0.603)S(0.395)PTR EY(-190.73)IPGQPPLS(-62.78)QS(-37.76)S(-25.2)DS(1.83)S(-1.83)PT(-37.69)R 15 2 -0.17365 36930 6413.5 0 33345 6359.9 0 39869 5460.8 0 32697 5824 0 26124 7285.1 0 48470 6265 0 37739 6870.5 0 35044 6097 0 32724 7067.8 0 25406 23120 0 34956 6065.2 0 31496 6004.9 0 39831 5575 0 33865 6019.7 0 27482 7279.5 0 47759 6301.5 0 37720 7018.9 0 36437 6818.9 0 32502 6965.5 0 24734 21911 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 344820000 338730000 6095000 0 NaN 527 322 885 885 1232;4720 1296;1297;5031 1396;1397 1547;1548;1549 1396 1548 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15288 1396 1548 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15288 1396 1548 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15288 P07814 886 P07814 P07814 Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase EPRS sp|P07814|SYEP_HUMAN Bifunctional glutamate/proline--tRNA ligase OS=Homo sapiens GN=EPRS PE=1 SV=5 0.698663 3.90969 5.48333E-08 149.85 133.34 149.85 1 S EYIPGQPPLSQSSDSSPTRNSEPAGLETPEA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX TGKEYIPGQPPLSQS(0.005)S(0.008)DS(0.284)S(0.699)PT(0.004)R T(-117.95)GKEY(-115.94)IPGQPPLS(-39.68)QS(-21.13)S(-19.4)DS(-3.91)S(3.91)PT(-22.55)R 19 3 -0.0045501 7796.8 0 0 5999.1 0 0 7347.5 0 0 6288.7 0 0 7298.2 0 0 9026.6 0 0 7769.4 0 0 8208.2 0 0 6963.5 0 0 9961.9 0 0 7376 0 0 5668.8 0 0 7424.6 0 0 6483.4 0 0 7415.1 0 0 8934.1 0 0 7863.9 0 0 8565.3 0 0 6905.1 0 0 9570.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17492000 17492000 0 0 NaN 528 322 886 886 1232;4720 1296;1297;5031 5360 5960 5360 5960 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14189 5360 5960 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14189 5360 5960 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14189 P07900 231 P07900 P07900 Heat shock protein HSP 90-alpha HSP90AA1 sp|P07900|HS90A_HUMAN Heat shock protein HSP 90-alpha OS=Homo sapiens GN=HSP90AA1 PE=1 SV=5 1 144.657 3.34137E-07 144.66 95.834 144.66 1 S YPITLFVEKERDKEVSDDEAEEKEDKEEEKE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX DKEVS(1)DDEAEEK DKEVS(144.66)DDEAEEK 5 3 -0.18645 33364 0 0 39812 0 0 40361 0 0 43087 0 0 26677 0 0 33159 0 0 23730 0 0 37283 0 0 47763 0 0 9334.8 0 0 31597 0 0 37628 0 0 40066 0 0 43881 0 0 27861 0 0 33749 0 0 24955 0 0 37519 0 0 46108 0 0 9652.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 45290000 45290000 0 0 NaN 529 323 231 231 717 761 812 898 812 898 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9320 812 898 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9320 812 898 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9320 P07910 233 P07910 P07910 Heterogeneous nuclear ribonucleoproteins C1/C2 HNRNPC sp|P07910|HNRPC_HUMAN Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Homo sapiens GN=HNRNPC PE=1 SV=4 1 75.6783 7.63976E-11 204.13 174.79 204.13 1 S EKEQSKQAVEMKNDKSEEEQSSSSVKKDETN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX NDKS(1)EEEQSSSSVK NDKS(75.68)EEEQS(-75.68)S(-97.78)S(-115.89)S(-120.32)VK 4 2 0.19335 32102 0 0 31808 0 0 32281 0 0 32549 0 0 40895 0 0 32415 0 0 40272 0 0 37662 0 0 33874 0 0 5802.4 0 0 30377 0 0 30052 0 0 32599 0 0 33373 0 0 40977 0 0 32574 0 0 40849 0 0 37749 0 0 33695 0 0 6335.3 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 1677700000 1677700000 0 0 NaN 530 324 233 233 2790 2959 3170;3171 3521;3522 3170 3521 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8066 3170 3521 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8066 3170 3521 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8066 P07910 240 P07910 P07910 Heterogeneous nuclear ribonucleoproteins C1/C2 HNRNPC sp|P07910|HNRPC_HUMAN Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Homo sapiens GN=HNRNPC PE=1 SV=4 0.642515 2.67398 3.18551E-07 162.42 119.12 162.42 1 S AVEMKNDKSEEEQSSSSVKKDETNVKMESEG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPXXXXXXXXXXXX NDKSEEEQS(0.001)S(0.01)S(0.643)S(0.347)VK NDKS(-80.69)EEEQS(-30.88)S(-18.15)S(2.67)S(-2.67)VK 11 3 1.4465 22710 0 0 30221 0 0 21238 0 0 26530 0 0 17978 0 0 23821 0 0 18820 0 0 24917 0 0 29950 0 0 4383.1 0 0 21484 0 0 28528 0 0 21432 0 0 27422 0 0 18459 0 0 24020 0 0 19421 0 0 25083 0 0 29080 0 0 4703.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15132000 15132000 0 0 NaN 531 324 240 240 2790 2959 3169 3520 3169 3520 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7396 3169 3520 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7396 3169 3520 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7396 P07948 11 P07948 P07948 Tyrosine-protein kinase Lyn LYN sp|P07948|LYN_HUMAN Tyrosine-protein kinase Lyn OS=Homo sapiens GN=LYN PE=1 SV=3 0.795691 5.90456 0.00460222 88.264 49.687 88.264 1 S _____MGCIKSKGKDSLSDDGVDLKTQPVRN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX GKDS(0.796)LS(0.204)DDGVDLK GKDS(5.9)LS(-5.9)DDGVDLK 4 3 2.7866 29787 0 0 22271 0 0 32319 0 0 21518 0 0 28326 0 0 32175 0 0 27418 0 0 27621 0 0 26006 0 0 13803 0 0 28195 0 0 21035 0 0 32348 0 0 22311 0 0 28967 0 0 31744 0 0 27914 0 0 28298 0 0 25720 0 0 13636 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 17609000 17609000 0 0 NaN 532 325 11 11 1484 1562 1687 1867;1868 1687 1867 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15233 1687 1867 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15233 1687 1867 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15233 P07949 696 P07949 P07949 Proto-oncogene tyrosine-protein kinase receptor Ret;Soluble RET kinase fragment;Extracellular cell-membrane anchored RET cadherin 120 kDa fragment RET sp|P07949|RET_HUMAN Proto-oncogene tyrosine-protein kinase receptor Ret OS=Homo sapiens GN=RET PE=1 SV=3 0.985264 18.2517 4.64587E-07 140.59 103.43 140.59 1 S QAFPVSYSSSGARRPSLDSMENQVSVDAFKI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX RPS(0.985)LDS(0.015)MENQVSVDAFK RPS(18.25)LDS(-18.25)MENQVS(-74.26)VDAFK 3 3 4.4267 19239 0 0 11506 0 0 20355 0 0 9472.9 0 0 8853.1 0 0 18620 0 0 9962 0 0 11203 0 0 11650 0 0 16904 0 0 18209 0 0 10858 0 0 20294 0 0 9997.6 0 0 9680.5 0 0 18194 0 0 10133 0 0 12035 0 0 11423 0 0 16176 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21147000 21147000 0 0 NaN 533 326 696 696 3406 3618 3859 4284 3859 4284 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19158 3859 4284 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19158 3859 4284 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19158 P08047 59 P08047 P08047 Transcription factor Sp1 SP1 sp|P08047|SP1_HUMAN Transcription factor Sp1 OS=Homo sapiens GN=SP1 PE=1 SV=3 0.993067 21.5682 9.81436E-08 148.19 132.67 147.51 1 S GSSSSTGGGGQESQPSPLALLAATCSRIESP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPXXXX SSSTGSSSSTGGGGQES(0.007)QPS(0.993)PLALLAATCSR S(-102.01)S(-102.01)S(-97.95)T(-93.76)GS(-84.5)S(-79.94)S(-74.69)S(-69.28)T(-63.72)GGGGQES(-21.57)QPS(21.57)PLALLAAT(-49.67)CS(-59.97)R 20 3 -0.19083 6438.6 0 0 5900.7 0 0 5634.1 0 0 7141.9 0 0 6589.6 0 0 6413.9 0 0 6252.7 0 0 7616.2 0 0 6863 0 0 40847 0 0 6089.6 0 0 5581.3 0 0 5730.5 0 0 7245.7 0 0 6626.5 0 0 6553.5 0 0 6397.6 0 0 8823.8 0 0 6745.9 0 0 38639 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 47874000 47874000 0 0 NaN 534 327 59 59 4473 4764 5070;5071 5626;5627 5070 5626 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20072 5071 5627 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20091 5071 5627 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20091 P08107;P34931 254;256 P08107 P08107 Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like HSPA1A;HSPA1L sp|P08107|HSP71_HUMAN Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN=HSPA1A PE=1 SV=5;sp|P34931|HS71L_HUMAN Heat shock 70 kDa protein 1-like OS=Homo sapiens GN=HSPA1L PE=1 SV=2 1 46.0014 0.0419642 46.001 9.308 46.001 1 S NHFVEEFKRKHKKDISQNKRAVRRLRTACER X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX DIS(1)QNKR DIS(46)QNKR 3 3 0.47744 13952 0 0 46202 0 0 12853 0 0 46449 0 0 13036 0 0 14191 0 0 13736 0 0 25006 0 0 44836 0 0 2100.8 0 0 13198 0 0 43647 0 0 13009 0 0 47159 0 0 13258 0 0 15804 0 0 14801 0 0 24727 0 0 42921 0 0 2556.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20665000 20665000 0 0 NaN 535 328 254 254 710 754 804 889 804 889 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6919 804 889 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6919 804 889 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6919 P08107 631 P08107 P08107 Heat shock 70 kDa protein 1A HSPA1A sp|P08107|HSP71_HUMAN Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN=HSPA1A PE=1 SV=5 0.992465 21.1965 3.83275E-11 207.44 190.27 207.44 1 S GPGPGGFGAQGPKGGSGSGPTIEEVD_____ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX GGS(0.992)GS(0.008)GPTIEEVD GGS(21.2)GS(-21.2)GPT(-92.57)IEEVD 3 2 -2.6736 11997 0 0 12753 0 0 11243 0 0 13191 0 0 9756.7 0 0 11057 0 0 8492.2 0 0 11481 0 0 12909 0 0 18442 0 0 11350 0 0 12050 0 0 11344 0 0 13483 0 0 9975.2 0 0 11218 0 0 8826 0 0 12055 0 0 12550 0 0 17631 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22062000 22062000 0 0 NaN 536 328 631 631 1446 1523 1634 1804 1634 1804 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13165 1634 1804 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13165 1634 1804 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13165 P08107 633 P08107 P08107 Heat shock 70 kDa protein 1A HSPA1A sp|P08107|HSP71_HUMAN Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN=HSPA1A PE=1 SV=5 0.96719 14.8465 1.0493E-06 140.09 125.42 140.09 1 S GPGGFGAQGPKGGSGSGPTIEEVD_______ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPXXXXXXX GGS(0.032)GS(0.967)GPT(0.001)IEEVD GGS(-14.85)GS(14.85)GPT(-29.35)IEEVD 5 2 -0.15305 13192 0 0 14297 0 0 14667 0 0 14880 0 0 12741 0 0 14848 0 0 12363 0 0 14775 0 0 18142 0 0 24799 0 0 12489 0 0 13509 0 0 14659 0 0 15242 0 0 13044 0 0 14930 0 0 12761 0 0 15570 0 0 17655 0 0 23693 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18511000 18511000 0 0 NaN 537 328 633 633 1446 1523 1633 1803 1633 1803 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12888 1633 1803 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12888 1633 1803 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12888 P08237 775 P08237 P08237 ATP-dependent 6-phosphofructokinase, muscle type PFKM sp|P08237|PFKAM_HUMAN ATP-dependent 6-phosphofructokinase, muscle type OS=Homo sapiens GN=PFKM PE=1 SV=2 1 70.4884 0.0178432 70.488 58.72 70.488 1 S DTSDHAHLEHITRKRSGEAAV__________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX KRS(1)GEAAV KRS(70.49)GEAAV 3 3 -0.25919 18567 0 0 14859 0 0 18151 0 0 13823 0 0 22653 0 0 17453 0 0 22440 0 0 19304 0 0 16809 0 0 1993.1 0 0 17567 0 0 14031 0 0 18356 0 0 14315 0 0 22714 0 0 17359 0 0 22698 0 0 19351 0 0 16825 0 0 2323.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29040000 29040000 0 0 NaN 538 330 775 775 2198 2324 2505 2796 2505 2796 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7001 2505 2796 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7001 2505 2796 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7001 P08238;Q58FF8 255;177 P08238 P08238 Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 HSP90AB1;HSP90AB2P sp|P08238|HS90B_HUMAN Heat shock protein HSP 90-beta OS=Homo sapiens GN=HSP90AB1 PE=1 SV=4;sp|Q58FF8|H90B2_HUMAN Putative heat shock protein HSP 90-beta 2 OS=Homo sapiens GN=HSP90AB2P PE=1 SV=2 1 108.776 6.21653E-42 352.73 326.02 210.38 1 S EDKDDEEKPKIEDVGSDEEDDSGKDKKKKTK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPXXXX IEDVGS(1)DEEDDSGKDKK IEDVGS(108.78)DEEDDS(-108.78)GKDKK 6 4 -0.27354 504270 0 0 600130 0 0 523490 0 0 597980 0 0 382630 0 0 528760 0 0 397190 0 0 525760 0 0 657600 0 0 274470 0 0 477240 0 0 566910 0 0 524320 0 0 613010 0 0 397070 0 0 533570 0 0 410740 0 0 535760 0 0 637810 0 0 270610 0 0 21 0 0 21 0 0 21 0 0 21 0 0 21 0 0 21 0 0 21 0 0 21 0 0 21 0 0 21 0 0 3889300000 3889300000 0 0 NaN 539 331 255 255 1807;1808;1809 1907;1908;1909 2054;2055;2056;2057;2058;2059;2060;2061;2062;2063 2290;2291;2292;2293;2294;2295;2296;2297;2298;2299;2300;2301;2302;2303;2304;2305;2306;2307;2308;2309;2310;2311;2312;2313 2061 2306 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13137 2054 2290 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12702 2054 2290 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12702 P08238 452 P08238 P08238 Heat shock protein HSP 90-beta HSP90AB1 sp|P08238|HS90B_HUMAN Heat shock protein HSP 90-beta OS=Homo sapiens GN=HSP90AB1 PE=1 SV=4 1 62.4075 0.0306947 62.408 13.057 62.408 1 S LKLGIHEDSTNRRRLSELLRYHTSQSGDEMT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX RLS(1)ELLR RLS(62.41)ELLR 3 2 0.13852 9167.5 0 0 9487.9 0 0 8815.1 0 0 10160 0 0 11388 0 0 7820.2 0 0 11071 0 0 9221.8 0 0 10095 0 0 4638.7 0 0 8673.4 0 0 8966.7 0 0 8927.5 0 0 10353 0 0 11399 0 0 7969.4 0 0 11258 0 0 9335.6 0 0 10002 0 0 4581.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20800000 20800000 0 0 NaN 540 331 452 452 3320 3522 3759 4175 3759 4175 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17928 3759 4175 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17928 3759 4175 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17928 P08559 232 P08559 P08559 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial PDHA1 sp|P08559|ODPA_HUMAN Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Homo sapiens GN=PDHA1 PE=1 SV=3 0.991147 20.4903 0.000519284 110.54 66.583 110.54 1 S PCIFICENNRYGMGTSVERAAASTDYYKRGD X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX YGMGT(0.009)S(0.991)VER Y(-76.29)GMGT(-20.49)S(20.49)VER 6 2 -0.43136 133840 0 0 65596 0 0 132450 0 0 67286 0 0 125660 0 0 145030 0 0 176830 0 0 132740 0 0 68675 0 0 267570 0 0 126650 0 0 61976 0 0 133460 0 0 70233 0 0 128540 0 0 142250 0 0 174580 0 0 141690 0 0 72348 0 0 255020 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 1064300000 1064300000 0 0 NaN 541 332 232 232 5381 5732;5733 6115;6116 6800;6801 6116 6801 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10890 6116 6801 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10890 6116 6801 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10890 P08559;P29803 295;293 P08559 P08559 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial PDHA1;PDHA2 sp|P08559|ODPA_HUMAN Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Homo sapiens GN=PDHA1 PE=1 SV=3;sp|P29803|ODPAT_HUMAN Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial OS=Homo sapi 0.676405 3.20199 5.35099E-05 131.25 115.9 131.25 2 S ILMELQTYRYHGHSMSDPGVSYRTREEIQEV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPXXXXXXXX YHGHS(0.324)MS(0.676)DPGVS(1)YR Y(-78.38)HGHS(-3.2)MS(3.2)DPGVS(41.76)Y(-41.76)R 7 3 -0.43127 0 11338 0 0 8012.5 0 0 11699 0 0 8577 0 0 9997.4 0 0 9578.4 0 0 11695 0 0 10181 0 0 8695.7 0 0 9886.7 0 0 10730 0 0 7572.3 0 0 11742 0 0 8788.2 0 0 10267 0 0 9582.4 0 0 11740 0 0 10487 0 0 8707.2 0 0 9545.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 14075000 0 14075000 0 NaN 542 332 295 295 5387 5739 6126 6813 6126 6813 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9428 6126 6813 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9428 6126 6813 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9428 P08559;P29803 300;298 P08559 P08559 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial PDHA1;PDHA2 sp|P08559|ODPA_HUMAN Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Homo sapiens GN=PDHA1 PE=1 SV=3;sp|P29803|ODPAT_HUMAN Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial OS=Homo sapi 0.999937 41.7641 5.35099E-05 131.25 115.9 131.25 2 S QTYRYHGHSMSDPGVSYRTREEIQEVRSKSD X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPXXXXXXXXXXXXX YHGHS(0.324)MS(0.676)DPGVS(1)YR Y(-78.38)HGHS(-3.2)MS(3.2)DPGVS(41.76)Y(-41.76)R 12 3 -0.43127 0 11338 0 0 8012.5 0 0 11699 0 0 8577 0 0 9997.4 0 0 9578.4 0 0 11695 0 0 10181 0 0 8695.7 0 0 9886.7 0 0 10730 0 0 7572.3 0 0 11742 0 0 8788.2 0 0 10267 0 0 9582.4 0 0 11740 0 0 10487 0 0 8707.2 0 0 9545.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 14075000 0 14075000 0 NaN 543 332 300 300 5387 5739 6126 6813 6126 6813 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9428 6126 6813 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9428 6126 6813 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9428 P08567 117 P08567 P08567 Pleckstrin PLEK sp|P08567|PLEK_HUMAN Pleckstrin OS=Homo sapiens GN=PLEK PE=1 SV=3 0.999998 57.3944 1.62079E-11 206.47 181.87 206.47 1 S CIEGGQKFARKSTRRSIRLPETIDLGALYLS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(1)IRLPETIDLGALYLSMK S(57.39)IRLPET(-57.39)IDLGALY(-153.26)LS(-148.48)MK 1 3 -0.57998 55140 0 0 7530.8 0 0 63822 0 0 7428.6 0 0 135440 0 0 55730 0 0 177420 0 0 87179 0 0 5495.5 0 0 91078 0 0 52210 0 0 7113.5 0 0 64722 0 0 8409.8 0 0 133650 0 0 54271 0 0 173880 0 0 88972 0 0 12714 0 0 87778 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 88329000 88329000 0 0 NaN 544 333 117 117 3860 4113 4389 4880 4389 4880 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23941 4389 4880 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23941 4389 4880 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23941 P08575 973 P08575 P08575 Receptor-type tyrosine-protein phosphatase C PTPRC sp|P08575|PTPRC_HUMAN Receptor-type tyrosine-protein phosphatase C OS=Homo sapiens GN=PTPRC PE=1 SV=2 0.99999 52.2235 0.000144449 106.75 97.494 106.75 1 S QHIGNQEENKSKNRNSNVIPYDYNRVPLKHE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX NRNS(1)NVIPYDYNR NRNS(52.22)NVIPY(-54.48)DY(-52.22)NR 4 3 -0.02628 14341 0 0 13963 0 0 13966 0 0 13128 0 0 21309 0 0 13899 0 0 26594 0 0 19872 0 0 16989 0 0 5984.9 0 0 13569 0 0 13185 0 0 14184 0 0 13542 0 0 21256 0 0 13983 0 0 26554 0 0 19882 0 0 17170 0 0 6095.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 98585000 98585000 0 0 NaN 545 334 973 973 2903 3077 3295 3654 3295 3654 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11675 3295 3654 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11675 3295 3654 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11675 P08621 410 P08621 P08621 U1 small nuclear ribonucleoprotein 70 kDa SNRNP70 sp|P08621|RU17_HUMAN U1 small nuclear ribonucleoprotein 70 kDa OS=Homo sapiens GN=SNRNP70 PE=1 SV=2 1 393.047 6.56216E-54 393.05 333.25 393.05 1 S GGGGQDNGLEGLGNDSRDMYMESEGGDGYLA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPXXXXXXXXXXXXXX GGGGGQDNGLEGLGNDS(1)R GGGGGQDNGLEGLGNDS(393.05)R 17 2 -1.637 8798 0 0 28162 0 0 7989.9 0 0 28396 0 0 16445 0 0 7669 0 0 18015 0 0 19953 0 0 32757 0 0 8035.1 0 0 8322.1 0 0 26605 0 0 8198.3 0 0 28809 0 0 16225 0 0 8781.3 0 0 18666 0 0 19780 0 0 31696 0 0 8027.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 143310000 143310000 0 0 NaN 546 335 410 410 1433 1510 1619 1789 1619 1789 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10862 1619 1789 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10862 1619 1789 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10862 P08621 268 P08621 P08621 U1 small nuclear ribonucleoprotein 70 kDa SNRNP70 sp|P08621|RU17_HUMAN U1 small nuclear ribonucleoprotein 70 kDa OS=Homo sapiens GN=SNRNP70 PE=1 SV=2 1 87.777 0.00989427 87.777 48.155 87.777 1 S ERRRSRSRDRRRRSRSRDKEERRRSRERSKD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX S(1)RDKEER S(87.78)RDKEER 1 3 -0.28103 27574 0 0 31097 0 0 26741 0 0 28703 0 0 30941 0 0 28177 0 0 36268 0 0 28154 0 0 29394 0 0 26184 0 0 26089 0 0 29363 0 0 27036 0 0 29609 0 0 31220 0 0 28316 0 0 36473 0 0 29030 0 0 29295 0 0 25307 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 139890000 139890000 0 0 NaN 547 335 268 268 4260 4539 4838 5369 4838 5369 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4828 4838 5369 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4828 4838 5369 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4828 P08621 226 P08621 P08621 U1 small nuclear ribonucleoprotein 70 kDa SNRNP70 sp|P08621|RU17_HUMAN U1 small nuclear ribonucleoprotein 70 kDa OS=Homo sapiens GN=SNRNP70 PE=1 SV=2 0.999996 53.5211 0.0035146 91.475 72.151 91.475 1 S SGRDDTSRYDERPGPSPLPHRDRDRDRERER X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPXXXXXXXXXX YDERPGPS(1)PLPHR Y(-53.52)DERPGPS(53.52)PLPHR 8 3 0.071968 18480 0 0 17392 0 0 19567 0 0 17677 0 0 12382 0 0 17315 0 0 14551 0 0 18669 0 0 15433 0 0 3299.8 0 0 17490 0 0 16431 0 0 19557 0 0 18127 0 0 13021 0 0 17395 0 0 14731 0 0 18773 0 0 15190 0 0 3539.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 283590000 283590000 0 0 NaN 548 335 226 226 5362 5712 6091 6770 6091 6770 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8896 6091 6770 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8896 6091 6770 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8896 P08670 459 P08670 P08670 Vimentin VIM sp|P08670|VIME_HUMAN Vimentin OS=Homo sapiens GN=VIM PE=1 SV=4 0.6508 2.70373 1.03618E-05 135.91 125.07 135.91 1 S IKTVETRDGQVINETSQHHDDLE________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPXXXXXXXX DGQVINET(0.349)S(0.651)QHHDDLE DGQVINET(-2.7)S(2.7)QHHDDLE 9 3 -0.1923 23380 0 0 26666 0 0 23794 0 0 21284 0 0 31507 0 0 24556 0 0 27333 0 0 25008 0 0 28301 0 0 6633.3 0 0 22125 0 0 25160 0 0 24022 0 0 22235 0 0 31460 0 0 24486 0 0 28050 0 0 25267 0 0 27884 0 0 6824.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 95340000 95340000 0 0 NaN 549 336 459 459 688 732 780 862 780 862 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9849 780 862 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9849 780 862 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9849 P08670 420 P08670 P08670 Vimentin VIM sp|P08670|VIME_HUMAN Vimentin OS=Homo sapiens GN=VIM PE=1 SV=4 0.999072 30.3197 2.26545E-10 188.63 158.06 188.63 1 S EGEESRISLPLPNFSSLNLRETNLDSLPLVD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPXXXXXXXXXXX ISLPLPNFS(0.001)S(0.999)LNLR IS(-124.09)LPLPNFS(-30.32)S(30.32)LNLR 10 2 -0.84782 15712 0 0 14961 0 0 16963 0 0 14531 0 0 20881 0 0 18612 0 0 22451 0 0 20939 0 0 17730 0 0 75799 0 0 14873 0 0 14131 0 0 17060 0 0 15012 0 0 20976 0 0 18645 0 0 22648 0 0 23197 0 0 17694 0 0 71859 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 41779000 41779000 0 0 NaN 550 336 420 420 1942 2052 2214 2475 2214 2475 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24035 2214 2475 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24035 2214 2475 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24035 P08670 73 P08670 P08670 Vimentin VIM sp|P08670|VIME_HUMAN Vimentin OS=Homo sapiens GN=VIM PE=1 SV=4 0.994084 22.2538 0.00509792 85.417 68.206 85.417 1 S GGVYATRSSAVRLRSSVPGVRLLQDSVDFSL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX LRS(0.006)S(0.994)VPGVR LRS(-22.25)S(22.25)VPGVR 4 3 -0.26278 27626 0 0 20947 0 0 25078 0 0 19537 0 0 30549 0 0 23288 0 0 32924 0 0 22685 0 0 19503 0 0 1150.8 0 0 26131 0 0 19780 0 0 25470 0 0 20206 0 0 30700 0 0 23170 0 0 33032 0 0 22813 0 0 19813 0 0 1608.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 43827000 43827000 0 0 NaN 551 336 73 73 2542 2686 2883 3215 2883 3215 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10429 2883 3215 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10429 2883 3215 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10429 P08670 25 P08670 P08670 Vimentin VIM sp|P08670|VIME_HUMAN Vimentin OS=Homo sapiens GN=VIM PE=1 SV=4 0.577227 1.54525 0.0102485 73.138 57.294 73.138 1 S SYRRMFGGPGTASRPSSSRSYVTTSTRTYSL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX MFGGPGT(0.001)AS(0.013)RPS(0.577)S(0.404)S(0.004)R MFGGPGT(-30.5)AS(-16.32)RPS(1.55)S(-1.55)S(-21.2)R 12 3 -0.17946 15378 0 0 18676 0 0 16602 0 0 18790 0 0 14596 0 0 15844 0 0 15090 0 0 18747 0 0 21911 0 0 3592.5 0 0 14556 0 0 17643 0 0 16624 0 0 19239 0 0 14944 0 0 16056 0 0 15523 0 0 18800 0 0 21330 0 0 3816.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 62415000 62415000 0 0 NaN 552 336 25 25 2695 2854 3061 3407 3061 3407 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11152 3061 3407 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11152 3061 3407 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11152 P08670 56 P08670 P08670 Vimentin VIM sp|P08670|VIME_HUMAN Vimentin OS=Homo sapiens GN=VIM PE=1 SV=4 0.851611 7.59434 0.0024916 94.882 72.304 94.882 1 S GSALRPSTSRSLYASSPGGVYATRSSAVRLR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPXXXXXXX SLYAS(0.148)S(0.852)PGGVYATR S(-40.51)LY(-38.28)AS(-7.59)S(7.59)PGGVY(-71.81)AT(-67.61)R 6 3 -0.272 8550.5 0 0 11365 0 0 8617.5 0 0 9614.9 0 0 8077.4 0 0 8569.8 0 0 9087.9 0 0 9423.8 0 0 8775.9 0 0 2912.2 0 0 8091.3 0 0 10726 0 0 8668.7 0 0 9962.3 0 0 8242.9 0 0 8652.8 0 0 9193.6 0 0 9507.4 0 0 8672.5 0 0 2960.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 55718000 55718000 0 0 NaN 553 336 56 56 4022 4287 4575 5083 4575 5083 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14272 4575 5083 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14272 4575 5083 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14272 P09234 17 P09234 P09234 U1 small nuclear ribonucleoprotein C SNRPC sp|P09234|RU1C_HUMAN U1 small nuclear ribonucleoprotein C OS=Homo sapiens GN=SNRPC PE=1 SV=1 0.911469 10.3836 3.20216E-16 235.68 234.25 235.68 1 S PKFYCDYCDTYLTHDSPSVRKTHCSGRKHKE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPXXXXXXXXXXX FYCDYCDTYLT(0.005)HDS(0.911)PS(0.083)VR FY(-163.25)CDY(-138.44)CDT(-53.53)Y(-98.07)LT(-22.53)HDS(10.38)PS(-10.38)VR 14 3 -1.2964 4010.9 0 0 8787 0 0 4387.8 0 0 8437.8 0 0 5486.2 0 0 5382.5 0 0 5787.5 0 0 6741.8 0 0 8691.5 0 0 24236 0 0 3796.8 0 0 8298.8 0 0 4410.6 0 0 8635.9 0 0 5509.6 0 0 5594.2 0 0 5956.2 0 0 7440.1 0 0 8452.8 0 0 22977 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17053000 17053000 0 0 NaN 554 340 17 17 1346 1419 1526 1689 1526 1689 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17861 1526 1689 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17861 1526 1689 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17861 P09651;Q32P51 95;95 P09651 P09651 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 HNRNPA1;HNRNPA1L2 sp|P09651|ROA1_HUMAN Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens GN=HNRNPA1 PE=1 SV=5;sp|Q32P51|RA1L2_HUMAN Heterogeneous nuclear ribonucleoprotein A1-like 2 OS=Homo sapiens GN=HNRNPA1L2 PE=2 SV=2 0.999524 33.2221 0.0293607 52.612 31.659 52.612 1 S DGRVVEPKRAVSREDSQRPGAHLTVKKIFVG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX EDS(1)QRPGAHLTVK EDS(33.22)QRPGAHLT(-33.22)VK 3 3 1.2515 21717 0 0 19669 0 0 24114 0 0 19547 0 0 19586 0 0 27524 0 0 25482 0 0 28109 0 0 20491 0 0 6435.7 0 0 20559 0 0 18580 0 0 24099 0 0 20206 0 0 20222 0 0 27252 0 0 25519 0 0 28367 0 0 20430 0 0 6710.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16753000 16753000 0 0 NaN 555 341 95 95 913 966 1047 1156 1047 1156 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9476 1047 1156 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9476 1047 1156 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9476 P09651 363 P09651 P09651 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed HNRNPA1 sp|P09651|ROA1_HUMAN Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens GN=HNRNPA1 PE=1 SV=5 0.903899 10.7564 6.70978E-31 289.95 269.82 289.95 1 S FAKPRNQGGYGGSSSSSSYGSGRRF______ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPXXXXXXXX NQGGYGGSSS(0.02)S(0.904)S(0.076)SYGSGR NQGGY(-191.04)GGS(-54.5)S(-43.73)S(-16.62)S(10.76)S(-10.76)S(-33.06)Y(-171.34)GS(-109.92)GR 11 2 -0.91572 4551.3 0 0 5308.2 0 0 4821.5 0 0 4080.6 0 0 3470.2 0 0 5946.5 0 0 4717.3 0 0 4812.8 0 0 5066.9 0 0 1246.9 0 0 4307.7 0 0 5007.5 0 0 4825.2 0 0 4294.7 0 0 3619.3 0 0 5865.3 0 0 4751.5 0 0 4909.1 0 0 4984.7 0 0 1285.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9286700 9286700 0 0 NaN 556 341 363 363 2891 3065 3283 3640 3283 3640 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6671 3283 3640 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6671 3283 3640 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6671 P09651 368 P09651 P09651 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed HNRNPA1 sp|P09651|ROA1_HUMAN Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens GN=HNRNPA1 PE=1 SV=5 0.999995 53.2399 2.40504E-42 360.4 340.15 360.4 1 S NQGGYGGSSSSSSYGSGRRF___________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX NQGGYGGSSSSSSYGS(1)GR NQGGY(-293.21)GGS(-166.26)S(-158.7)S(-137.72)S(-119.9)S(-86.88)S(-53.24)Y(-228.19)GS(53.24)GR 16 2 0.23388 9465.9 0 0 17226 0 0 10544 0 0 14362 0 0 10289 0 0 10891 0 0 18888 0 0 16735 0 0 18294 0 0 860.6 0 0 8961.2 0 0 16256 0 0 10568 0 0 14865 0 0 10578 0 0 11146 0 0 18798 0 0 16586 0 0 18076 0 0 1197.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 48303000 48303000 0 0 NaN 557 341 368 368 2891 3065 3282 3639 3282 3639 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6452 3282 3639 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6452 3282 3639 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6452 P09651 6 P09651 P09651 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed HNRNPA1 sp|P09651|ROA1_HUMAN Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens GN=HNRNPA1 PE=1 SV=5 0.999992 50.7521 1.4639E-10 204.07 178.03 204.07 1;2 S __________MSKSESPKEPEQLRKLFIGGL X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPXXXXXX SES(1)PKEPEQLR S(-50.75)ES(50.75)PKEPEQLR 3 2 -0.31743 52827 14932 0 83471 25562 0 56284 18414 0 80701 25988 0 62859 23805 0 50876 16025 0 66906 26034 0 69796 22792 0 89787 28645 0 14348 5609.1 0 50001 14143 0 78836 24150 0 56564 18412 0 82551 26497 0 63480 23873 0 52591 16603 0 68537 26465 0 69709 22768 0 87622 28154 0 15125 5809.1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 1135300000 1061900000 73437000 0 NaN 558 341 6 6 3710;3711;3898 3945;3946;4153;4154 4205;4206;4433 4672;4673;4927 4205 4672 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9223 4205 4672 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9223 4205 4672 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9223 P09651 2 P09651 P09651 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed HNRNPA1 sp|P09651|ROA1_HUMAN Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens GN=HNRNPA1 PE=1 SV=5 0.946115 12.5614 8.70873E-05 76.341 54.187 50.155 1;2 S ______________MSKSESPKEPEQLRKLF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX S(0.946)KS(0.052)ES(0.001)PKEPEQLR S(12.56)KS(-12.56)ES(-28.21)PKEPEQLR 1 3 -0.69033 68095 14932 0 73775 25562 0 71513 18414 0 70059 25988 0 62490 23805 0 72626 16025 0 66036 26034 0 70072 22792 0 71279 28645 0 7346.6 5609.1 0 64449 14143 0 69671 24150 0 71709 18412 0 72203 26497 0 64003 23873 0 72664 16603 0 67192 26465 0 70607 22768 0 70109 28154 0 8539.4 5809.1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 145210000 71769000 73437000 0 NaN 559 341 2 2 3898 4153;4154 4432;4433 4926;4927 4432 4926 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9989 4433 4927 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10566 4433 4927 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10566 P09651;Q32P51 337;285 P09651 P09651 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 HNRNPA1;HNRNPA1L2 sp|P09651|ROA1_HUMAN Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens GN=HNRNPA1 PE=1 SV=5;sp|Q32P51|RA1L2_HUMAN Heterogeneous nuclear ribonucleoprotein A1-like 2 OS=Homo sapiens GN=HNRNPA1L2 PE=2 SV=2 0.967009 14.6703 6.57726E-11 197.53 164.13 197.53 1 S SSNFGPMKGGNFGGRSSGPYGGGGQYFAKPR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.967)S(0.033)GPYGGGGQYFAKPR S(14.67)S(-14.67)GPY(-82.43)GGGGQY(-158.54)FAKPR 1 3 -0.11637 46413 0 0 55464 0 0 43427 0 0 54798 0 0 43623 0 0 46945 0 0 55727 0 0 55154 0 0 57739 0 0 14723 0 0 43907 0 0 52391 0 0 43925 0 0 56179 0 0 44431 0 0 47537 0 0 56199 0 0 55449 0 0 56885 0 0 15140 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 125800000 125800000 0 0 NaN 560 341 337 337 4352;4353 4638;4639 4941;4942 5485;5486 4942 5486 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13924 4942 5486 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13924 4942 5486 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13924 P09651;Q32P51 338;286 P09651 P09651 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 HNRNPA1;HNRNPA1L2 sp|P09651|ROA1_HUMAN Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens GN=HNRNPA1 PE=1 SV=5;sp|Q32P51|RA1L2_HUMAN Heterogeneous nuclear ribonucleoprotein A1-like 2 OS=Homo sapiens GN=HNRNPA1L2 PE=2 SV=2 0.499998 0 8.54555E-07 139.93 112.08 139.93 1 S SNFGPMKGGNFGGRSSGPYGGGGQYFAKPRN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.5)S(0.5)GPYGGGGQYFAK S(0)S(0)GPY(-51.84)GGGGQY(-110.01)FAK 2 3 -0.84885 9868.5 0 0 12336 0 0 11274 0 0 11507 0 0 10225 0 0 10666 0 0 11910 0 0 12964 0 0 14671 0 0 4770.3 0 0 9343.4 0 0 11649 0 0 11262 0 0 11852 0 0 10465 0 0 10766 0 0 12118 0 0 13058 0 0 14358 0 0 4791.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21555000 21555000 0 0 NaN 561 341 338 338 4352;4353 4638;4639 4941 5485 4941 5485 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15624 4941 5485 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15624 4941 5485 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15624 P09874 372 P09874 P09874 Poly [ADP-ribose] polymerase 1 PARP1 sp|P09874|PARP1_HUMAN Poly [ADP-ribose] polymerase 1 OS=Homo sapiens GN=PARP1 PE=1 SV=4 0.249347 0 3.18396E-06 133.47 116.67 133.47 S FPPETSASVAATPPPSTASAPAAVNSSASAD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IFPPETS(0.002)ASVAAT(0.249)PPPS(0.249)T(0.249)AS(0.249)APAAVNSSASADKPLSNMK IFPPET(-29.11)S(-21.18)AS(-27.96)VAAT(0)PPPS(0)T(0)AS(0)APAAVNS(-46.53)S(-52.88)AS(-67.86)ADKPLS(-93.52)NMK 17 6 -0.20395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 562 343 372 372 1833 1934;1935 2091 2345 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20071 2091 2345 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20071 2091 2345 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20071 P09874 375 P09874 P09874 Poly [ADP-ribose] polymerase 1 PARP1 sp|P09874|PARP1_HUMAN Poly [ADP-ribose] polymerase 1 OS=Homo sapiens GN=PARP1 PE=1 SV=4 0.249347 0 3.18396E-06 133.47 116.67 133.47 S ETSASVAATPPPSTASAPAAVNSSASADKPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IFPPETS(0.002)ASVAAT(0.249)PPPS(0.249)T(0.249)AS(0.249)APAAVNSSASADKPLSNMK IFPPET(-29.11)S(-21.18)AS(-27.96)VAAT(0)PPPS(0)T(0)AS(0)APAAVNS(-46.53)S(-52.88)AS(-67.86)ADKPLS(-93.52)NMK 20 6 -0.20395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 563 343 375 375 1833 1934;1935 2091 2345 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20071 2091 2345 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20071 2091 2345 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20071 P09884 186 P09884 P09884 DNA polymerase alpha catalytic subunit POLA1 sp|P09884|DPOLA_HUMAN DNA polymerase alpha catalytic subunit OS=Homo sapiens GN=POLA1 PE=1 SV=2 0.969779 15.0641 5.67937E-08 158.33 135.9 158.33 1 S PQITPPPVMILKKKRSIGASPNPFSVHTATA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.97)IGAS(0.03)PNPFSVHTATAVPSGK S(15.06)IGAS(-15.06)PNPFS(-54.19)VHT(-90.13)AT(-118.96)AVPS(-150.89)GK 1 3 -0.39161 9545.2 0 0 9376.4 0 0 10451 0 0 9633.1 0 0 10548 0 0 13357 0 0 11004 0 0 15295 0 0 12157 0 0 20700 0 0 9035.6 0 0 8859 0 0 10473 0 0 9935.1 0 0 10706 0 0 13286 0 0 11211 0 0 15890 0 0 11947 0 0 19846 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9915300 9915300 0 0 NaN 564 344 186 186 3843 4096 4371 4861 4371 4861 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17294 4371 4861 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17294 4371 4861 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17294 P0C1Z6 252 P0C1Z6 P0C1Z6 TCF3 fusion partner TFPT sp|P0C1Z6|TFPT_HUMAN TCF3 fusion partner OS=Homo sapiens GN=TFPT PE=1 SV=1 1 67.2833 1.46736E-22 257.54 233.31 257.54 1 S GPDKLLPYPTLASPASD______________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPXXXXXXXXXXXXXX LLPYPTLASPAS(1)D LLPY(-243.95)PT(-169.3)LAS(-67.28)PAS(67.28)D 12 2 0.52383 8906.3 0 0 7194 0 0 9758.4 0 0 7685.2 0 0 10739 0 0 11498 0 0 11730 0 0 9531.8 0 0 7172.1 0 0 29709 0 0 8430.8 0 0 6798.8 0 0 9791.1 0 0 7922.2 0 0 10850 0 0 11386 0 0 11768 0 0 10532 0 0 7270.1 0 0 28195 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 35834000 35834000 0 0 NaN 565 348 252 252 2452 2590 2784 3111 2784 3111 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23997 2784 3111 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23997 2784 3111 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23997 P0CAP2 270 P0CAP2 P0CAP2 DNA-directed RNA polymerase II subunit GRINL1A POLR2M sp|P0CAP2|GRL1A_HUMAN DNA-directed RNA polymerase II subunit GRINL1A OS=Homo sapiens GN=POLR2M PE=1 SV=1 0.75765 7.76209 0.011689 79.286 47.077 79.286 1 S PFRQNDSSSHCQKSGSPISSEERRRRDKQHL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX S(0.058)GS(0.758)PIS(0.058)S(0.127)EER S(-11.18)GS(7.76)PIS(-11.18)S(-7.76)EER 3 2 2.4836 14467 0 0 18062 0 0 14810 0 0 18895 0 0 15601 0 0 16285 0 0 14597 0 0 16242 0 0 20761 0 0 4207.6 0 0 13691 0 0 17067 0 0 14901 0 0 19308 0 0 15777 0 0 16447 0 0 15075 0 0 16420 0 0 20223 0 0 4337.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11081000 11081000 0 0 NaN 566 349 270 270 3812 4061 4333 4815 4333 4815 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6986 4333 4815 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6986 4333 4815 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6986 P0CAP2;Q9BZD3 179;179 P0CAP2 P0CAP2 DNA-directed RNA polymerase II subunit GRINL1A;Putative GRINL1B complex locus protein 2 POLR2M;GCOM2 sp|P0CAP2|GRL1A_HUMAN DNA-directed RNA polymerase II subunit GRINL1A OS=Homo sapiens GN=POLR2M PE=1 SV=1;sp|Q9BZD3|GCOM2_HUMAN Putative GRINL1B complex locus protein 2 OS=Homo sapiens GN=GCOM2 PE=5 SV=2 0.869955 8.25405 3.99193E-11 191.41 159.58 191.41 1 S PSSEASEHHPRHRVSSQAEDTSSSFDNLFID X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP VS(0.13)S(0.87)QAEDTSSSFDNLFIDR VS(-8.25)S(8.25)QAEDT(-97.77)S(-112.57)S(-120.31)S(-126.73)FDNLFIDR 3 3 0.76345 3171.3 0 0 4112.6 0 0 4728.1 0 0 3169.1 0 0 3380.7 0 0 3599.9 0 0 3764.6 0 0 4393.2 0 0 2762.9 0 0 15413 0 0 3006.7 0 0 3879.7 0 0 4655.6 0 0 3318.5 0 0 3514.8 0 0 3628.1 0 0 3786.2 0 0 4840.4 0 0 2768.7 0 0 14615 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14330000 14330000 0 0 NaN 567 349 179 179 5280 5627 5998 6664 5998 6664 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22251 5998 6664 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22251 5998 6664 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22251 P10242 532 P10242 P10242 Transcriptional activator Myb MYB sp|P10242|MYB_HUMAN Transcriptional activator Myb OS=Homo sapiens GN=MYB PE=1 SV=2 0.967969 14.803 0.000140723 108.56 67.466 108.56 1 S ENGPPLLKKIKQEVESPTDKSGNFFCSHHWE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX IKQEVES(0.968)PT(0.032)DK IKQEVES(14.8)PT(-14.8)DK 7 3 0.33292 77382 0 0 43732 0 0 76724 0 0 43645 0 0 37030 0 0 81697 0 0 37443 0 0 56625 0 0 47487 0 0 16901 0 0 73221 0 0 41312 0 0 76809 0 0 45431 0 0 39938 0 0 79908 0 0 38369 0 0 58280 0 0 46430 0 0 17225 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 24532000 24532000 0 0 NaN 568 351 532 532 1870 1974 2132 2389;2390 2132 2389 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12544 2132 2389 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12544 2132 2389 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12544 P10242 599 P10242 P10242 Transcriptional activator Myb MYB sp|P10242|MYB_HUMAN Transcriptional activator Myb OS=Homo sapiens GN=MYB PE=1 SV=2 0.81949 6.57159 1.1009E-05 132.84 112.75 132.84 1 S NVLKAFTVPKNRSLASPLQPCSSTWEPASCG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP S(0.18)LAS(0.819)PLQPCSSTWEPASCGK S(-6.57)LAS(6.57)PLQPCS(-42.3)S(-65.02)T(-76.16)WEPAS(-110.18)CGK 4 3 1.3118 9542.3 0 0 6062.4 0 0 10262 0 0 7015.6 0 0 4702.5 0 0 11723 0 0 5651.8 0 0 8175.8 0 0 6669.4 0 0 16501 0 0 9032.1 0 0 5732.4 0 0 10226 0 0 7220.9 0 0 5114.7 0 0 11527 0 0 5735.4 0 0 8835.6 0 0 6537.6 0 0 15727 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16577000 16577000 0 0 NaN 569 351 599 599 3918 4176 4457 4955 4457 4955 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18753 4457 4955 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18753 4457 4955 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18753 P10398 269 P10398 P10398 Serine/threonine-protein kinase A-Raf ARAF sp|P10398|ARAF_HUMAN Serine/threonine-protein kinase A-Raf OS=Homo sapiens GN=ARAF PE=1 SV=2 0.998202 25.1965 0.0123109 67.415 32.544 67.415 2 S PRGSPSPASVSSGRKSPHSKSPAEQRERKSL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPXXXXX S(0.998)PHS(0.597)KS(0.405)PAEQR S(25.2)PHS(1.69)KS(-1.69)PAEQR 1 3 0.68891 0 4936.8 0 0 13627 0 0 4766.5 0 0 15160 0 0 7656.4 0 0 5443.1 0 0 8048.9 0 0 9533.3 0 0 14963 0 0 3093.6 0 0 4670.8 0 0 12881 0 0 4845.5 0 0 15317 0 0 7611.2 0 0 5946.7 0 0 8363.6 0 0 9497.3 0 0 14470 0 0 3133.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 9441600 0 9441600 0 NaN 570 352 269 269 4119 4392 4683 5199 4683 5199 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5517 4683 5199 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5517 4683 5199 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5517 P10398 272 P10398 P10398 Serine/threonine-protein kinase A-Raf ARAF sp|P10398|ARAF_HUMAN Serine/threonine-protein kinase A-Raf OS=Homo sapiens GN=ARAF PE=1 SV=2 0.596842 1.69073 0.0123109 67.415 32.544 67.415 2 S SPSPASVSSGRKSPHSKSPAEQRERKSLADD X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX S(0.998)PHS(0.597)KS(0.405)PAEQR S(25.2)PHS(1.69)KS(-1.69)PAEQR 4 3 0.68891 0 4936.8 0 0 13627 0 0 4766.5 0 0 15160 0 0 7656.4 0 0 5443.1 0 0 8048.9 0 0 9533.3 0 0 14963 0 0 3093.6 0 0 4670.8 0 0 12881 0 0 4845.5 0 0 15317 0 0 7611.2 0 0 5946.7 0 0 8363.6 0 0 9497.3 0 0 14470 0 0 3133.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 9441600 0 9441600 0 NaN 571 352 272 272 4119 4392 4683 5199 4683 5199 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5517 4683 5199 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5517 4683 5199 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5517 P10398 212 P10398 P10398 Serine/threonine-protein kinase A-Raf ARAF sp|P10398|ARAF_HUMAN Serine/threonine-protein kinase A-Raf OS=Homo sapiens GN=ARAF PE=1 SV=2 0.330795 0 4.29548E-19 246.05 233.56 246.05 S FPFPAPANAPLQRIRSTSTPNVHMVSTTAPM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.331)T(0.331)S(0.256)T(0.082)PNVHMVSTTAPMDSNLIQLTGQSFSTDAAGSR S(0)T(0)S(-1.11)T(-6.04)PNVHMVS(-54.66)T(-51.86)T(-50.43)APMDS(-126.66)NLIQLT(-220.49)GQS(-231.83)FS(-237.84)T(-240.28)DAAGS(-245.66)R 1 4 -0.73547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 572 352 212 212 4532 4831;4832 5148 5716 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21728 5148 5716 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21728 5148 5716 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21728 P10398 214 P10398 P10398 Serine/threonine-protein kinase A-Raf ARAF sp|P10398|ARAF_HUMAN Serine/threonine-protein kinase A-Raf OS=Homo sapiens GN=ARAF PE=1 SV=2 0.689874 7.00153 6.20046E-26 273.73 259.88 273.73 1 S FPAPANAPLQRIRSTSTPNVHMVSTTAPMDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.138)T(0.138)S(0.69)T(0.035)PNVHMVSTTAPMDSNLIQLTGQSFSTDAAGSR S(-7)T(-7)S(7)T(-12.96)PNVHMVS(-60.43)T(-74.63)T(-81.64)APMDS(-145.48)NLIQLT(-230.03)GQS(-244.12)FS(-252.42)T(-252.01)DAAGS(-266.11)R 3 3 -1.6259 1748.9 0 0 3144.5 0 0 1410.6 0 0 3108.8 0 0 2612 0 0 2945.7 0 0 4713.8 0 0 4245.1 0 0 3291.8 0 0 54306 0 0 1653.7 0 0 2970.3 0 0 1458.5 0 0 3191.6 0 0 2608.1 0 0 3078.5 0 0 4658.4 0 0 5844.2 0 0 3308.3 0 0 51234 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 13699000 13699000 0 0 NaN 573 352 214 214 4532 4831;4832 5149 5717;5718 5149 5718 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21769 5149 5718 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21769 5149 5718 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21769 P10412;P16401;P16403 113;116;113 P10412;P16401;P16403 P16401 Histone H1.4;Histone H1.5;Histone H1.2 HIST1H1E;HIST1H1B;HIST1H1C sp|P10412|H14_HUMAN Histone H1.4 OS=Homo sapiens GN=HIST1H1E PE=1 SV=2;sp|P16401|H15_HUMAN Histone H1.5 OS=Homo sapiens GN=HIST1H1B PE=1 SV=3;sp|P16403|H12_HUMAN Histone H1.2 OS=Homo sapiens GN=HIST1H1C PE=1 SV=2 1 99.2153 0.00103481 99.215 65.991 99.215 1 S GTGASGSFKLNKKAASGEAKPKAKKAGAAKA;GTGASGSFKLNKKAASGEAKPKVKKAGGTKP X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX AAS(1)GEAKPK AAS(99.22)GEAKPK 3 3 0.92998 22118 0 0 20256 0 0 20933 0 0 19293 0 0 8527.9 0 0 20353 0 0 8616.7 0 0 16335 0 0 17134 0 0 2008.3 0 0 20924 0 0 19130 0 0 20994 0 0 19886 0 0 9395.8 0 0 20307 0 0 9000.1 0 0 16601 0 0 16545 0 0 2269.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29048000 29048000 0 0 2.5141 574 353;407;409 113;116;113 116 67 72 79 91 79 91 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7561 79 91 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7561 79 91 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7561 P10412;P16401;P16402;P16403;P22492;Q02539 104;107;105;104;108;107 P10412;P16401;P16402;P16403;Q02539 P16401 Histone H1.4;Histone H1.5;Histone H1.3;Histone H1.2;Histone H1t;Histone H1.1 HIST1H1E;HIST1H1B;HIST1H1D;HIST1H1C;HIST1H1T;HIST1H1A sp|P10412|H14_HUMAN Histone H1.4 OS=Homo sapiens GN=HIST1H1E PE=1 SV=2;sp|P16401|H15_HUMAN Histone H1.5 OS=Homo sapiens GN=HIST1H1B PE=1 SV=3;sp|P16402|H13_HUMAN Histone H1.3 OS=Homo sapiens GN=HIST1H1D PE=1 SV=2;sp|P16403|H12_HUMAN Histone H1.2 OS=Homo sa 0.999407 32.2668 1.54359E-06 169.58 129.19 134.73 1 S SKGTLVQTKGTGASGSFKLNKKAASGEAKPK;SKGTLVQTKGTGASGSFKLNKKAASGEGKPK;SKGTLVQTKGTGASGSFKLNKKASSVETKPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX GTGAS(0.001)GS(0.999)FK GT(-71.95)GAS(-32.27)GS(32.27)FK 7 2 0.1622 665810 0 0 707540 0 0 693830 0 0 668420 0 0 385290 0 0 678600 0 0 389620 0 0 580000 0 0 722380 0 0 13171 0 0 630130 0 0 668170 0 0 693260 0 0 688860 0 0 409580 0 0 678520 0 0 405500 0 0 585850 0 0 698650 0 0 21286 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 1 0 0 786510000 786510000 0 0 NaN 575 353;407;408;409;851 104;107;105;104;107 107 1655 1746 1887;1888 2105;2106 1887 2105 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9887 1888 2106 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10839 1888 2106 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10839 P10412 187 P10412 P10412 Histone H1.4 HIST1H1E sp|P10412|H14_HUMAN Histone H1.4 OS=Homo sapiens GN=HIST1H1E PE=1 SV=2 1 90.6291 0.00718902 90.629 22.637 90.629 1 S SPKKAKAAKPKKAPKSPAKAKAVKPKAAKPK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX KAPKS(1)PAK KAPKS(90.63)PAK 5 3 0.2496 196880 0 0 139390 0 0 194390 0 0 132100 0 0 56527 0 0 164330 0 0 61485 0 0 125820 0 0 137280 0 0 7740.3 0 0 186290 0 0 131630 0 0 194200 0 0 136590 0 0 65646 0 0 162810 0 0 64424 0 0 127930 0 0 132240 0 0 10200 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 4111200000 4111200000 0 0 NaN 576 353 187 187 2007 2122 2286 2552;2553 2286 2552 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7631 2286 2552 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7631 2286 2552 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7631 P10412;P16402 36;37 P10412;P16402 P10412 Histone H1.4;Histone H1.3 HIST1H1E;HIST1H1D sp|P10412|H14_HUMAN Histone H1.4 OS=Homo sapiens GN=HIST1H1E PE=1 SV=2;sp|P16402|H13_HUMAN Histone H1.3 OS=Homo sapiens GN=HIST1H1D PE=1 SV=2 0.999999 59.0178 4.46575E-05 130.36 82.827 116.43 1 S KKAKKAGATAGKRKASGPPVSELITKAVAAS;KKKARKSAGAAKRKASGPPVSELITKAVAAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX RKAS(1)GPPVSELITK RKAS(59.02)GPPVS(-59.02)ELIT(-97.32)K 4 3 -0.27233 23608 0 0 53554 0 0 23074 0 0 55260 0 0 27861 0 0 26102 0 0 28932 0 0 38427 0 0 62702 0 0 19775 0 0 22337 0 0 50600 0 0 23326 0 0 56167 0 0 28037 0 0 27656 0 0 30323 0 0 38663 0 0 60436 0 0 19510 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 249080000 249080000 0 0 NaN 577 353;408 36;37 36 2010;3288 2125;3489 2290;3726 2557;4139 3726 4139 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15508 2290 2557 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17474 2290 2557 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17474 P10644 83 P10644 P10644 cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed PRKAR1A sp|P10644|KAP0_HUMAN cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Homo sapiens GN=PRKAR1A PE=1 SV=1 1 118.201 8.20542E-05 118.2 88.873 118.2 1 S LQKAGTRTDSREDEISPPPPNPVVKGRRRRG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPXXXXXX EDEIS(1)PPPPNPVVK EDEIS(118.2)PPPPNPVVK 5 3 -0.69224 41471 0 0 23192 0 0 39621 0 0 22105 0 0 51257 0 0 40139 0 0 53284 0 0 40098 0 0 23418 0 0 16531 0 0 39235 0 0 21902 0 0 40149 0 0 23053 0 0 51329 0 0 39459 0 0 53323 0 0 40721 0 0 24373 0 0 16494 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 150580000 150580000 0 0 NaN 578 355 83 83 898;4668 951;4979 1030;5303 1138;5891;5892 1030 1138 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15434 1030 1138 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15434 5303 5891 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13640 P10721 962 P10721 P10721 Mast/stem cell growth factor receptor Kit KIT sp|P10721|KIT_HUMAN Mast/stem cell growth factor receptor Kit OS=Homo sapiens GN=KIT PE=1 SV=1 0.939894 14.6055 5.8388E-05 107.32 95.339 107.32 1 S QKPVVDHSVRINSVGSTASSSQPLLVHDDV_ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPX INS(0.033)VGS(0.94)T(0.026)AS(0.001)SSQPLLVHDDV INS(-14.61)VGS(14.61)T(-15.58)AS(-28.08)S(-40.16)S(-47.75)QPLLVHDDV 6 3 -0.63162 4402.9 0 0 5037.4 0 0 4824.4 0 0 4843.6 0 0 4509.6 0 0 4459 0 0 5262.7 0 0 5378.6 0 0 4654.4 0 0 15454 0 0 4167.9 0 0 4757.6 0 0 4831.2 0 0 4978.9 0 0 4605 0 0 4527.3 0 0 5304.2 0 0 5825.1 0 0 4618.3 0 0 14676 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6038200 6038200 0 0 NaN 579 356 962 962 1901 2008 2168 2428 2168 2428 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18351 2168 2428 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18351 2168 2428 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18351 P10809 70 P10809 P10809 60 kDa heat shock protein, mitochondrial HSPD1 sp|P10809|CH60_HUMAN 60 kDa heat shock protein, mitochondrial OS=Homo sapiens GN=HSPD1 PE=1 SV=2 0.999999 60.1432 2.6093E-07 151.8 128.79 151.8 1 S MGPKGRTVIIEQSWGSPKVTKDGVTVAKSID X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX TVIIEQSWGS(1)PK T(-102.98)VIIEQS(-60.14)WGS(60.14)PK 10 3 -0.023638 6320.8 0 0 8489.6 0 0 6847.6 0 0 9066.9 0 0 8276.1 0 0 6880.7 0 0 7937.5 0 0 8596.5 0 0 9388.1 0 0 8238.6 0 0 5983.1 0 0 8023.1 0 0 6881.7 0 0 9239.2 0 0 8310.9 0 0 7031.5 0 0 8135.7 0 0 8804.7 0 0 9201.7 0 0 7956.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 89876000 89876000 0 0 NaN 580 357 70 70 5008 5338 5688 6318 5688 6318 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18982 5688 6318 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18982 5688 6318 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18982 P11142 2 P11142 P11142 Heat shock cognate 71 kDa protein HSPA8 sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein OS=Homo sapiens GN=HSPA8 PE=1 SV=1 0.999968 45.9443 1.43594E-17 144.92 129.22 91.729 1 S ______________MSKGPAVGIDLGTTYSC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(1)KGPAVGIDLGTTYSCVGVFQHGK S(45.94)KGPAVGIDLGT(-45.94)T(-52.8)Y(-59.03)S(-63.99)CVGVFQHGK 1 3 0.8152 11013 0 0 18313 0 0 10509 0 0 18464 0 0 14604 0 0 12149 0 0 18148 0 0 17049 0 0 19971 0 0 47783 0 0 10420 0 0 17301 0 0 10668 0 0 18847 0 0 14630 0 0 12611 0 0 18353 0 0 18352 0 0 19628 0 0 45388 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 86230000 86230000 0 0 NaN 581 359 2 2 3885 4139 4417;4418 4911;4912 4417 4911 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20948 4418 4912 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20952 4418 4912 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20952 P11171 188 P11171 P11171 Protein 4.1 EPB41 sp|P11171|41_HUMAN Protein 4.1 OS=Homo sapiens GN=EPB41 PE=1 SV=4 0.994174 22.321 4.6831E-05 144.65 89.538 144.65 1 S GEGLEECSKIEVKEESPQSKAETELKASQKP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX EES(0.994)PQS(0.006)K EES(22.32)PQS(-22.32)K 3 2 0.67632 42778 0 0 66004 0 0 38444 0 0 67517 0 0 102190 0 0 35874 0 0 104010 0 0 69360 0 0 74120 0 0 17670 0 0 40463 0 0 62360 0 0 39744 0 0 68724 0 0 99932 0 0 37824 0 0 104970 0 0 68808 0 0 74402 0 0 18243 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 92542000 92542000 0 0 NaN 582 360 188 188 935;1828 989;1929 1073;2083 1185;2334 1073 1185 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6546 1073 1185 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6546 1073 1185 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6546 P11171 709 P11171 P11171 Protein 4.1 EPB41 sp|P11171|41_HUMAN Protein 4.1 OS=Homo sapiens GN=EPB41 PE=1 SV=4 0.734774 4.42545 0.00032465 113.34 84.435 113.34 1 S ESVPEPRPSEWDKRLSTHSPFRTLNINGQIP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX RLS(0.735)T(0.265)HSPFR RLS(4.43)T(-4.43)HS(-51.92)PFR 3 3 0.21979 9542.8 0 0 25659 0 0 10284 0 0 25992 0 0 16226 0 0 10276 0 0 15502 0 0 16917 0 0 27200 0 0 349.16 0 0 9032.8 0 0 24241 0 0 10384 0 0 26415 0 0 16116 0 0 11086 0 0 16135 0 0 16722 0 0 26342 0 0 720.29 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 68350000 68350000 0 0 NaN 583 360 709 709 3351 3553 3791 4209 3791 4209 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9875 3791 4209 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9875 3791 4209 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9875 P11171 542 P11171 P11171 Protein 4.1 EPB41 sp|P11171|41_HUMAN Protein 4.1 OS=Homo sapiens GN=EPB41 PE=1 SV=4 1 108.422 4.01844E-31 299.66 253.02 299.66 1 S PAPHFERTASKRASRSLDGAAAVDSADRSPR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX S(1)LDGAAAVDSADR S(108.42)LDGAAAVDS(-108.42)ADR 1 2 -0.79349 15109 0 0 24224 0 0 14712 0 0 26333 0 0 38125 0 0 15678 0 0 41831 0 0 28923 0 0 29757 0 0 17463 0 0 14295 0 0 22895 0 0 15131 0 0 26738 0 0 37348 0 0 16390 0 0 42072 0 0 29025 0 0 29874 0 0 17113 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26555000 26555000 0 0 NaN 584 360 542 542 3920;3921 4178;4179 4459 4957 4459 4957 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11720 4459 4957 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11720 4459 4957 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11720 P11171 555 P11171 P11171 Protein 4.1 EPB41 sp|P11171|41_HUMAN Protein 4.1 OS=Homo sapiens GN=EPB41 PE=1 SV=4 0.993522 21.8856 4.39644E-46 344.66 317.41 344.66 1 S SRSLDGAAAVDSADRSPRPTSAPAITQGQVA X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPPPPPPPPPPP SLDGAAAVDS(0.006)ADRS(0.994)PRPTSAPAITQGQVAEGGVLDASAK S(-51.32)LDGAAAVDS(-21.89)ADRS(21.89)PRPT(-47.56)S(-47.56)APAIT(-96.17)QGQVAEGGVLDAS(-305.42)AK 14 6 0.22813 9422.9 0 0 15421 0 0 9925.4 0 0 16156 0 0 13333 0 0 10285 0 0 14512 0 0 17620 0 0 16127 0 0 166270 0 0 8918.4 0 0 14571 0 0 10009 0 0 16449 0 0 13348 0 0 10977 0 0 14760 0 0 22400 0 0 15844 0 0 156970 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 1094900000 1094900000 0 0 NaN 585 360 555 555 3921;4164 4179;4439 4460;4461 4958;4959 4460 4958 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16689 4460 4958 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16689 4460 4958 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16689 P11171 560 P11171 P11171 Protein 4.1 EPB41 sp|P11171|41_HUMAN Protein 4.1 OS=Homo sapiens GN=EPB41 PE=1 SV=4 0.45632 0 4.48093E-12 193.49 174.45 193.49 S GAAAVDSADRSPRPTSAPAITQGQVAEGGVL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.082)PRPT(0.456)S(0.456)APAIT(0.006)QGQVAEGGVLDASAK S(-7.47)PRPT(0)S(0)APAIT(-19.03)QGQVAEGGVLDAS(-187.33)AK 6 4 -0.97812 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 586 360 560 560 3921;4164 4179;4439 4731 5250 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15934 4731 5250 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15934 4731 5250 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15934 P11172 214 P11172 P11172 Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase UMPS sp|P11172|UMPS_HUMAN Uridine 5'-monophosphate synthase OS=Homo sapiens GN=UMPS PE=1 SV=1 0.999491 32.9328 2.82357E-16 226.03 190.09 226.03 1 S RFIQENVFVAANHNGSPLSIKEAPKELSFGA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX FIQENVFVAANHNGS(0.999)PLS(0.001)IK FIQENVFVAANHNGS(32.93)PLS(-32.93)IK 15 3 -0.32357 5724.3 0 0 8057.2 0 0 5300.6 0 0 8518.8 0 0 5779.6 0 0 4656.4 0 0 5444.6 0 0 7756.6 0 0 9179.8 0 0 20228 0 0 5415.1 0 0 7614 0 0 5367 0 0 8656.6 0 0 5835.7 0 0 4916.7 0 0 5660.5 0 0 8269.8 0 0 8899.3 0 0 19226 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13291000 13291000 0 0 NaN 587 361 214 214 1281 1350 1452 1611 1452 1611 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22047 1452 1611 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22047 1452 1611 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22047 P11274 698 P11274 P11274 Breakpoint cluster region protein BCR sp|P11274|BCR_HUMAN Breakpoint cluster region protein OS=Homo sapiens GN=BCR PE=1 SV=2 0.999965 44.5586 0.00556279 91.656 60.234 91.656 1 S NFLSSINEEITPRRQSMTVKKGEHRQLLKDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX RQS(1)MTVK RQS(44.56)MT(-44.56)VK 3 3 -0.21867 17982 0 0 39158 0 0 17241 0 0 39227 0 0 20778 0 0 16762 0 0 22029 0 0 26206 0 0 40529 0 0 2655.9 0 0 17013 0 0 36992 0 0 17449 0 0 39912 0 0 20912 0 0 17928 0 0 22870 0 0 26000 0 0 39206 0 0 3107.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14601000 14601000 0 0 NaN 588 362 698 698 3424 3636 3878 4304 3878 4304 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8126 3878 4304 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8126 3878 4304 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8126 P11274 301 P11274 P11274 Breakpoint cluster region protein BCR sp|P11274|BCR_HUMAN Breakpoint cluster region protein OS=Homo sapiens GN=BCR PE=1 SV=2 0.869178 10.0679 0.00029547 103.3 80.411 103.3 1 S GMMEGEGKGPLLRSQSTSEQEKRLTWPRRSY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX S(0.086)QS(0.869)T(0.043)S(0.002)EQEKR S(-10.07)QS(10.07)T(-13.07)S(-25.66)EQEKR 3 3 -0.56722 2815.2 0 0 10677 0 0 3537.5 0 0 10856 0 0 6414 0 0 3560.9 0 0 6546.4 0 0 7586.6 0 0 11479 0 0 2860.3 0 0 2666.6 0 0 10088 0 0 3556 0 0 11019 0 0 6345.6 0 0 3950.7 0 0 6792.4 0 0 7540.1 0 0 11118 0 0 2868.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15401000 15401000 0 0 NaN 589 362 301 301 4249 4528 4827 5358 4827 5358 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5370 4827 5358 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5370 4827 5358 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5370 P11274 354 P11274 P11274 Breakpoint cluster region protein BCR sp|P11274|BCR_HUMAN Breakpoint cluster region protein OS=Homo sapiens GN=BCR PE=1 SV=2 0.998918 29.6536 5.06779E-09 179.72 144.57 179.72 1 S TSSEEDFSSGQSSRVSPSPTTYRMFRDKSRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPXXXXXXXX VS(0.999)PS(0.001)PTTYR VS(29.65)PS(-29.65)PT(-83.68)T(-102.67)Y(-141.74)R 2 2 -0.13716 17452 0 0 36840 0 0 16507 0 0 38354 0 0 29339 0 0 15416 0 0 29405 0 0 28335 0 0 38620 0 0 16633 0 0 16511 0 0 34810 0 0 16833 0 0 38920 0 0 29025 0 0 16669 0 0 30181 0 0 28423 0 0 37716 0 0 16318 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28950000 28950000 0 0 NaN 590 362 354 354 5267 5613 5983 6647 5983 6647 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9756 5983 6647 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9756 5983 6647 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9756 P11388 1392 P11388 P11388 DNA topoisomerase 2-alpha TOP2A sp|P11388|TOP2A_HUMAN DNA topoisomerase 2-alpha OS=Homo sapiens GN=TOP2A PE=1 SV=3 0.488145 1.09096 6.65583E-08 159.81 116.2 159.81 S SDLEADDVKGSVPLSSSPPATHFPDETEITN Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPPPP GS(0.001)VPLS(0.108)S(0.488)S(0.38)PPAT(0.023)HFPDETEITNPVPK GS(-25.7)VPLS(-6.54)S(1.09)S(-1.09)PPAT(-13.36)HFPDET(-44.15)EIT(-105.91)NPVPK 7 4 0.598 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 591 363 1392 1392 1645 1733 1872 2085 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18943 1872 2085 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18943 1872 2085 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18943 P11388 1247 P11388 P11388 DNA topoisomerase 2-alpha TOP2A sp|P11388|TOP2A_HUMAN DNA topoisomerase 2-alpha OS=Homo sapiens GN=TOP2A PE=1 SV=3 0.999984 47.9531 1.61667E-16 226.9 172.68 226.9 1 S EKKNKKKIKNENTEGSPQEDGVELEGLKQRL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPPPXXX IKNENTEGS(1)PQEDGVELEGLK IKNENT(-47.95)EGS(47.95)PQEDGVELEGLK 9 3 -0.07086 5883.6 0 0 12972 0 0 6155.3 0 0 13283 0 0 4742.5 0 0 6237.1 0 0 5115.1 0 0 9113.6 0 0 13761 0 0 39027 0 0 5568.4 0 0 12256 0 0 6165.8 0 0 13507 0 0 4909.5 0 0 6675.8 0 0 5425.6 0 0 10206 0 0 13211 0 0 36960 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26140000 26140000 0 0 NaN 592 363 1247 1247 1867 1971 2129 2386 2129 2386 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17301 2129 2386 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17301 2129 2386 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17301 P11388 4 P11388 P11388 DNA topoisomerase 2-alpha TOP2A sp|P11388|TOP2A_HUMAN DNA topoisomerase 2-alpha OS=Homo sapiens GN=TOP2A PE=1 SV=3 1 101.199 2.35762E-07 101.2 75.88 101.2 1 S ____________MEVSPLQPVNENMQVNKIK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPXX MEVS(1)PLQPVNENMQVNK MEVS(101.2)PLQPVNENMQVNK 4 3 -0.30551 11207 0 0 12491 0 0 10788 0 0 13815 0 0 7331.6 0 0 9243.8 0 0 8285.4 0 0 10895 0 0 12002 0 0 15056 0 0 10603 0 0 11807 0 0 10846 0 0 14030 0 0 7661.2 0 0 9518.6 0 0 8489.8 0 0 11318 0 0 11685 0 0 14429 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 36592000 36592000 0 0 NaN 593 363 4 4 2694 2853 3060 3406 3060 3406 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20134 3060 3406 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20134 3060 3406 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20134 P11388 1374 P11388 P11388 DNA topoisomerase 2-alpha TOP2A sp|P11388|TOP2A_HUMAN DNA topoisomerase 2-alpha OS=Homo sapiens GN=TOP2A PE=1 SV=3 0.999183 30.8737 1.1951E-07 164.93 129.58 164.93 1 S KTSPKLSNKELKPQKSVVSDLEADDVKGSVP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(0.999)VVS(0.001)DLEADDVK S(30.87)VVS(-30.87)DLEADDVK 1 3 0.065011 11575 0 0 7452.9 0 0 11190 0 0 6782.2 0 0 5449 0 0 10854 0 0 5145.5 0 0 9063.9 0 0 7409.4 0 0 4193.9 0 0 10952 0 0 7036.6 0 0 11219 0 0 7070.1 0 0 5866.5 0 0 10683 0 0 5314.3 0 0 9287.4 0 0 7214.9 0 0 4158.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13752000 13752000 0 0 NaN 594 363 1374 1374 4581 4886 5204 5779 5204 5779 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18350 5204 5779 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18350 5204 5779 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18350 P11388 1377 P11388 P11388 DNA topoisomerase 2-alpha TOP2A sp|P11388|TOP2A_HUMAN DNA topoisomerase 2-alpha OS=Homo sapiens GN=TOP2A PE=1 SV=3 0.91595 10.3733 0.00545999 85.163 61.331 85.163 1 S PKLSNKELKPQKSVVSDLEADDVKGSVPLSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY) XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX S(0.084)VVS(0.916)DLEADDVK S(-10.37)VVS(10.37)DLEADDVK 4 3 0.11511 4132.9 0 0 8858.5 0 0 5055 0 0 8915.2 0 0 4394.6 0 0 5093.6 0 0 4770.1 0 0 6450.2 0 0 8772.4 0 0 4873.3 0 0 3914.3 0 0 8368.7 0 0 5029.8 0 0 9089 0 0 4507.8 0 0 5302.4 0 0 4947.1 0 0 6564.3 0 0 8485.9 0 0 4738.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10354000 10354000 0 0 NaN 595 363 1377 1377 4581 4886 5205 5780 5205 5780 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19972 5205 5780 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19972 5205 5780 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19972 P11388 1213 P11388 P11388 DNA topoisomerase 2-alpha TOP2A sp|P11388|TOP2A_HUMAN DNA topoisomerase 2-alpha OS=Homo sapiens GN=TOP2A PE=1 SV=3 1 119.317 1.29785E-06 141.65 101.07 141.65 1 S GKAKGKKTQMAEVLPSPRGQRVIPRITIEMK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX TQMAEVLPS(1)PR T(-119.32)QMAEVLPS(119.32)PR 9 2 -0.22449 24497 0 0 27806 0 0 28215 0 0 30397 0 0 16364 0 0 23850 0 0 19524 0 0 23000 0 0 30050 0 0 15309 0 0 23194 0 0 26282 0 0 28058 0 0 30948 0 0 17360 0 0 24216 0 0 20011 0 0 23564 0 0 29204 0 0 14948 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 57934000 57934000 0 0 NaN 596 363 1213 1213 4876 5201 5540 6158 5540 6158 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15268 5540 6158 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15268 5540 6158 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15268 P11441 90 P11441 P11441 Ubiquitin-like protein 4A UBL4A sp|P11441|UBL4A_HUMAN Ubiquitin-like protein 4A OS=Homo sapiens GN=UBL4A PE=1 SV=1 1 141.956 6.45746E-07 146.13 92.35 146.13 1 S EKVLLEEGEAQRLADSPPPQVWQLISKVLAR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPXXXX LADS(1)PPPQVWQLISK LADS(141.96)PPPQVWQLIS(-141.96)K 4 3 0.039413 4918.8 0 0 8055.3 0 0 4466.8 0 0 8363.9 0 0 6168.3 0 0 5133.9 0 0 5827.4 0 0 6256.9 0 0 6796.6 0 0 14445 0 0 4652.7 0 0 7611.3 0 0 4544 0 0 8517 0 0 6155.3 0 0 5331.4 0 0 5974.7 0 0 6667.9 0 0 6665.1 0 0 13747 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14179000 14179000 0 0 NaN 597 364 90 90 2283 2412 2595 2900 2595 2900 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23752 2595 2900 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23752 2595 2900 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23752 P11717 2347 P11717 P11717 Cation-independent mannose-6-phosphate receptor IGF2R sp|P11717|MPRI_HUMAN Cation-independent mannose-6-phosphate receptor OS=Homo sapiens GN=IGF2R PE=1 SV=3 0.992826 21.6724 0.00807424 91.123 51.206 91.123 1 S RETVISKLTTCCRRSSNVSYKYSKVNKEEET X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX RS(0.007)S(0.993)NVSYK RS(-21.67)S(21.67)NVS(-33.77)Y(-56.19)K 3 2 -0.70156 23188 0 0 12365 0 0 23888 0 0 13120 0 0 8903.9 0 0 25849 0 0 8476.3 0 0 15721 0 0 14313 0 0 5490.9 0 0 21944 0 0 11685 0 0 23830 0 0 13629 0 0 9919.9 0 0 25225 0 0 8808.5 0 0 16327 0 0 13875 0 0 5534.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15230000 15230000 0 0 NaN 598 365 2347 2347 3502 3719 3965 4403 3965 4403 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7504 3965 4403 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7504 3965 4403 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7504 P11831 224 P11831 P11831 Serum response factor SRF sp|P11831|SRF_HUMAN Serum response factor OS=Homo sapiens GN=SRF PE=1 SV=1 0.999682 34.9757 2.20218E-05 133.92 119.71 133.92 1 S ETGKALIQTCLNSPDSPPRSDPTTDQRMSAT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX ALIQTCLNSPDS(1)PPR ALIQT(-96.91)CLNS(-34.98)PDS(34.98)PPR 12 3 -2.9061 8570.8 0 0 8955.9 0 0 8658.6 0 0 7628.1 0 0 6504.6 0 0 8224.1 0 0 7417.9 0 0 7473.5 0 0 7781.5 0 0 4996.5 0 0 8110.5 0 0 8452.8 0 0 8689 0 0 7922.9 0 0 6741.4 0 0 8216.9 0 0 7516.9 0 0 7676.1 0 0 7662.6 0 0 4877.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13947000 13947000 0 0 NaN 599 366 224 224 294 315 336 376 336 376 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16666 336 376 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16666 336 376 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16666 P12268 416 P12268 P12268 Inosine-5'-monophosphate dehydrogenase 2 IMPDH2 sp|P12268|IMDH2_HUMAN Inosine-5'-monophosphate dehydrogenase 2 OS=Homo sapiens GN=IMPDH2 PE=1 SV=2 1 145.226 3.3191E-06 145.23 109.28 145.23 1 S FFSDGIRLKKYRGMGSLDAMDKHLSSQNRYF X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX GMGS(1)LDAMDK GMGS(145.23)LDAMDK 4 2 -0.99371 46823 0 0 37446 0 0 47309 0 0 37046 0 0 41560 0 0 48728 0 0 43214 0 0 46993 0 0 41164 0 0 28244 0 0 44308 0 0 35372 0 0 47542 0 0 38250 0 0 42536 0 0 48352 0 0 43853 0 0 48056 0 0 40703 0 0 27682 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 40420000 40420000 0 0 NaN 600 369 416 416 1522 1602;1603 1731;1732 1923;1924 1732 1924 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16208 1732 1924 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16208 1732 1924 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16208 P12268 160 P12268 P12268 Inosine-5'-monophosphate dehydrogenase 2 IMPDH2 sp|P12268|IMDH2_HUMAN Inosine-5'-monophosphate dehydrogenase 2 OS=Homo sapiens GN=IMPDH2 PE=1 SV=2 0.979256 16.74 0.0324388 59.052 18.328 59.052 1 S TDTGRMGSRLVGIISSRDIDFLKEEEHDCFL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPXXXXXXXXXXXXXX LVGIIS(0.021)S(0.979)R LVGIIS(-16.74)S(16.74)R 7 2 0.046312 23561 0 0 21969 0 0 24420 0 0 22076 0 0 14595 0 0 18828 0 0 13282 0 0 19629 0 0 23741 0 0 5706.2 0 0 22298 0 0 20754 0 0 24418 0 0 22609 0 0 15382 0 0 19038 0 0 13869 0 0 19830 0 0 22981 0 0 5827.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 42486000 42486000 0 0 NaN 601 369 160 160 2648 2795 2996 3334 2996 3334 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18203 2996 3334 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18203 2996 3334 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18203 P12270 2050 P12270 P12270 Nucleoprotein TPR TPR sp|P12270|TPR_HUMAN Nucleoprotein TPR OS=Homo sapiens GN=TPR PE=1 SV=3 0.988497 20.0005 2.30701E-12 201.63 187.57 201.63 1 S QNSGEGNTGAAESSFSQEVSREQQPSSASER X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX AADSQNSGEGNTGAAESS(0.01)FS(0.988)QEVS(0.001)R AADS(-160.46)QNS(-144.05)GEGNT(-82.21)GAAES(-37.28)S(-20)FS(20)QEVS(-28.38)R 20 3 1.2484 5734.7 0 0 6000.3 0 0 6150.2 0 0 6103.1 0 0 7873.3 0 0 5489.5 0 0 8283.4 0 0 6850.9 0 0 6802.7 0 0 6403.6 0 0 5428.1 0 0 5668.8 0 0 6190.9 0 0 6250.3 0 0 7892.5 0 0 5558.9 0 0 8371.6 0 0 7012.2 0 0 6775 0 0 6188.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11123000 11123000 0 0 NaN 602 370 2050 2050 20 22 25 33 25 33 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11341 25 33 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11341 25 33 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11341 P12270 379 P12270 P12270 Nucleoprotein TPR TPR sp|P12270|TPR_HUMAN Nucleoprotein TPR OS=Homo sapiens GN=TPR PE=1 SV=3 0.999992 50.8099 3.31314E-23 260.56 237.46 260.56 1 S KRKGAILSEEELAAMSPTAAAVAKIVKPGMK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPXXXXXXX GAILSEEELAAMS(1)PTAAAVAK GAILS(-119.46)EEELAAMS(50.81)PT(-50.81)AAAVAK 13 3 -0.088635 7064.9 0 0 9243.6 0 0 7091.3 0 0 9198.2 0 0 4905.8 0 0 6663.8 0 0 5900.5 0 0 8052.9 0 0 9547.3 0 0 16185 0 0 6685.3 0 0 8731.9 0 0 7114.1 0 0 9406.4 0 0 5124.9 0 0 6840.5 0 0 6058.3 0 0 8511.5 0 0 9265.6 0 0 15427 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26687000 26687000 0 0 NaN 603 370 379 379 1363 1437 1545 1708 1545 1708 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21564 1545 1708 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21564 1545 1708 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21564 P12270 646 P12270 P12270 Nucleoprotein TPR TPR sp|P12270|TPR_HUMAN Nucleoprotein TPR OS=Homo sapiens GN=TPR PE=1 SV=3 0.777831 6.08753 2.70036E-05 130.33 107.28 130.33 1 S SSLDDVSLASTPKRPSTSQTVSTPAPVPVIE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RPS(0.778)T(0.191)S(0.012)QT(0.017)VS(0.001)T(0.001)PAPVPVIESTEAIEAK RPS(6.09)T(-6.09)S(-18.07)QT(-16.69)VS(-28.48)T(-29.97)PAPVPVIES(-80.74)T(-89.4)EAIEAK 3 3 0.50644 3641 0 0 3390.5 0 0 4212.2 0 0 3567.2 0 0 3217.6 0 0 4360.2 0 0 3712.2 0 0 4851.3 0 0 3715.2 0 0 25873 0 0 3447.5 0 0 3203.9 0 0 4197.4 0 0 3664.7 0 0 3330.9 0 0 4389.9 0 0 3755 0 0 5626.8 0 0 3665.6 0 0 24475 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13979000 13979000 0 0 NaN 604 370 646 646 3416 3628 3870 4296 3870 4296 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19556 3870 4296 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19556 3870 4296 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19556 P12270 2155 P12270 P12270 Nucleoprotein TPR TPR sp|P12270|TPR_HUMAN Nucleoprotein TPR OS=Homo sapiens GN=TPR PE=1 SV=3 0.999998 58.2386 4.20049E-06 136.56 104.38 136.56 1 S LVVPHRTDGFAEAIHSPQVAGVPRFRFGPPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPXXXXXXX TDGFAEAIHS(1)PQVAGVPR T(-58.24)DGFAEAIHS(58.24)PQVAGVPR 10 3 -0.92434 8294.1 0 0 12254 0 0 9248.6 0 0 12367 0 0 7591.6 0 0 9132.3 0 0 9386.3 0 0 10795 0 0 12747 0 0 10041 0 0 7852 0 0 11577 0 0 9241 0 0 12639 0 0 7830.3 0 0 9337.9 0 0 9560.3 0 0 11066 0 0 12435 0 0 9704.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29709000 29709000 0 0 NaN 605 370 2155 2155 4658 4969 5293 5881 5293 5881 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16049 5293 5881 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16049 5293 5881 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16049 P12956 477 P12956 P12956 X-ray repair cross-complementing protein 6 XRCC6 sp|P12956|XRCC6_HUMAN X-ray repair cross-complementing protein 6 OS=Homo sapiens GN=XRCC6 PE=1 SV=2 0.957612 13.5394 6.3861E-16 227.88 206.58 227.88 1 S MKAIVEKLRFTYRSDSFENPVLQQHFRNLEA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX S(0.042)DS(0.958)FENPVLQQHFR S(-13.54)DS(13.54)FENPVLQQHFR 3 3 0.040807 8807.2 0 0 5908.9 0 0 9302 0 0 5904.7 0 0 10148 0 0 9316.8 0 0 10113 0 0 9352.2 0 0 6485.7 0 0 7390.8 0 0 8335.7 0 0 5581.9 0 0 9348.4 0 0 6117.8 0 0 10244 0 0 9200.7 0 0 10197 0 0 9602.3 0 0 6553.3 0 0 7175.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37032000 37032000 0 0 NaN 606 372 477 477 3672 3907 4167 4633 4167 4633 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16684 4167 4633 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16684 4167 4633 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16684 P12956 2 P12956 P12956 X-ray repair cross-complementing protein 6 XRCC6 sp|P12956|XRCC6_HUMAN X-ray repair cross-complementing protein 6 OS=Homo sapiens GN=XRCC6 PE=1 SV=2 0.968475 14.8743 1.47944E-05 80.18 59.026 80.18 1 S ______________MSGWESYYKTEGDEEAE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX S(0.968)GWES(0.032)YYK S(14.87)GWES(-14.87)Y(-66.67)Y(-74.59)K 1 2 0.055816 19131 0 0 13567 0 0 20648 0 0 13150 0 0 51555 0 0 19497 0 0 62609 0 0 33065 0 0 12055 0 0 16487 0 0 18109 0 0 12814 0 0 21104 0 0 13630 0 0 50602 0 0 19460 0 0 61815 0 0 33138 0 0 14039 0 0 16290 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 282490000 282490000 0 0 NaN 607 372 2 2 3831 4084 4357 4842;4843 4357 4842 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19417 4357 4842 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19417 4357 4842 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19417 P12956 306 P12956 P12956 X-ray repair cross-complementing protein 6 XRCC6 sp|P12956|XRCC6_HUMAN X-ray repair cross-complementing protein 6 OS=Homo sapiens GN=XRCC6 PE=1 SV=2 0.457037 0 0.000239627 112.45 83.871 112.45 S ETNEPVKTKTRTFNTSTGGLLLPSDTKRSQI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T(0.001)FNT(0.457)S(0.457)T(0.085)GGLLLPSDTKR T(-29.21)FNT(0)S(0)T(-7.29)GGLLLPS(-84.38)DT(-89.46)KR 5 3 0.32311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 608 372 306 306 4708 5019 5346 5941 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18618 5346 5941 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18618 5346 5941 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18618 P12980 276 P12980 P12980 Protein lyl-1 LYL1 sp|P12980|LYL1_HUMAN Protein lyl-1 OS=Homo sapiens GN=LYL1 PE=2 SV=3 0.997962 26.8988 1.03522E-14 218.74 166.35 218.74 1 S PGGAARPIKMEQTALSPEVR___________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX MEQT(0.002)ALS(0.998)PEVR MEQT(-26.9)ALS(26.9)PEVR 7 2 -0.00050283 10781 0 0 25262 0 0 10883 0 0 26293 0 0 34608 0 0 10841 0 0 33539 0 0 24457 0 0 26869 0 0 24292 0 0 10202 0 0 23870 0 0 11241 0 0 26686 0 0 33698 0 0 11772 0 0 34008 0 0 24736 0 0 26794 0 0 23440 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 64350000 64350000 0 0 NaN 609 373 276 276 2685 2841 3048 3394 3048 3394 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13350 3048 3394 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13350 3048 3394 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13350 P12980 260 P12980 P12980 Protein lyl-1 LYL1 sp|P12980|LYL1_HUMAN Protein lyl-1 OS=Homo sapiens GN=LYL1 PE=2 SV=3 1 115.987 1.43542E-11 194.77 169.22 194.77 1 S AAARSQPAPPADPDGSPGGAARPIKMEQTAL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPPPXXXXXX SQPAPPADPDGS(1)PGGAARPIK S(-115.99)QPAPPADPDGS(115.99)PGGAARPIK 12 3 0.26442 7386.9 0 0 17436 0 0 9364.5 0 0 16338 0 0 34183 0 0 7262.2 0 0 35066 0 0 20696 0 0 20020 0 0 9069.7 0 0 6997.3 0 0 16465 0 0 9621.4 0 0 16697 0 0 33222 0 0 7869.9 0 0 35240 0 0 20513 0 0 20392 0 0 9019.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 34312000 34312000 0 0 NaN 610 373 260 260 4233 4511 4807 5335 4807 5335 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11050 4807 5335 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11050 4807 5335 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11050 P13051 23 P13051 P13051 Uracil-DNA glycosylase UNG sp|P13051|UNG_HUMAN Uracil-DNA glycosylase OS=Homo sapiens GN=UNG PE=1 SV=2 0.998083 27.1654 4.74496E-05 118.14 103.21 118.14 1 S YSFFSPSPARKRHAPSPEPAVQGTGVAGVPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP HAPS(0.998)PEPAVQGT(0.002)GVAGVPEESGDAAAIPAK HAPS(27.17)PEPAVQGT(-27.17)GVAGVPEES(-92.64)GDAAAIPAK 4 4 0.75761 7782.4 0 0 6603.3 0 0 6609.5 0 0 7484.2 0 0 15491 0 0 8320.5 0 0 14778 0 0 11010 0 0 6108.8 0 0 8243.9 0 0 7359.7 0 0 6242.9 0 0 6830.2 0 0 7644.2 0 0 15178 0 0 8352 0 0 14839 0 0 11188 0 0 6395.3 0 0 8017.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27623000 27623000 0 0 NaN 611 374 23 23 1693 1785 1927 2146 1927 2146 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15378 1927 2146 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15378 1927 2146 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15378 P13224 191 P13224 P13224 Platelet glycoprotein Ib beta chain GP1BB sp|P13224|GP1BB_HUMAN Platelet glycoprotein Ib beta chain OS=Homo sapiens GN=GP1BB PE=1 SV=1 0.997791 26.5492 3.60239E-10 192.71 145.15 137.86 1 S RRLRARARARAAARLSLTDPLVAERAGTDES X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPXXXXXX AAARLS(0.998)LT(0.002)DPLVAER AAARLS(26.55)LT(-26.55)DPLVAER 6 3 0.13106 26009 0 0 52352 0 0 28614 0 0 52696 0 0 30383 0 0 27204 0 0 27949 0 0 36529 0 0 52223 0 0 26677 0 0 24621 0 0 49457 0 0 28680 0 0 53676 0 0 30717 0 0 28573 0 0 29231 0 0 37084 0 0 50499 0 0 25965 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 91466000 91466000 0 0 NaN 612 375 191 191 10;2562 11;2706 14;2904 21;3238 14 21 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18084 2904 3238 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21417 2904 3238 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21417 P13489 2 P13489 P13489 Ribonuclease inhibitor RNH1 sp|P13489|RINI_HUMAN Ribonuclease inhibitor OS=Homo sapiens GN=RNH1 PE=1 SV=2 0.82163 6.63354 6.37121E-05 78.234 63.881 78.234 1 S ______________MSLDIQSLDIQCEELSD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.822)LDIQS(0.178)LDIQCEELSDAR S(6.63)LDIQS(-6.63)LDIQCEELS(-72.46)DAR 1 3 0.89892 3963 0 0 2681.5 0 0 3379.8 0 0 2166.2 0 0 3044.3 0 0 3155.2 0 0 3218 0 0 3673.5 0 0 2983.1 0 0 11887 0 0 3747.8 0 0 2530.1 0 0 3433 0 0 2271.5 0 0 3111.4 0 0 3147.3 0 0 3260.9 0 0 4022.9 0 0 2953.4 0 0 11278 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5022200 5022200 0 0 0.86531 613 376 2 2 3923 4182 4464 4962 4464 4962 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22774 4464 4962 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22774 4464 4962 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22774 P13612 1021 P13612 P13612 Integrin alpha-4 ITGA4 sp|P13612|ITA4_HUMAN Integrin alpha-4 OS=Homo sapiens GN=ITGA4 PE=1 SV=3 0.996618 24.7004 1.60472E-07 152.66 128.2 152.66 1 S KRQYKSILQEENRRDSWSYINSKSNDD____ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPXXXXXXXX SILQEENRRDS(0.997)WS(0.003)YINSK S(-52.73)ILQEENRRDS(24.7)WS(-24.7)Y(-85.88)INS(-115.53)K 11 4 0.18907 32832 0 0 13226 0 0 38663 0 0 13738 0 0 84970 0 0 32575 0 0 92609 0 0 45228 0 0 14960 0 0 46566 0 0 31089 0 0 12497 0 0 39178 0 0 14377 0 0 83528 0 0 32057 0 0 91775 0 0 46279 0 0 18054 0 0 44894 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 286720000 286720000 0 0 NaN 614 377 1021 1021 3218;3847 3412;4100 3646;4375 4043;4866 4375 4866 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16432 4375 4866 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16432 4375 4866 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16432 P13796 5 P13796 P13796 Plastin-2 LCP1 sp|P13796|PLSL_HUMAN Plastin-2 OS=Homo sapiens GN=LCP1 PE=1 SV=6 0.99982 37.4538 2.65279E-52 365.93 308.64 92.65 1 S ___________MARGSVSDEEMMELREAFAK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Oxidation (M);Oxidation (M);X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX GS(1)VSDEEMMELR GS(37.45)VS(-37.45)DEEMMELR 2 2 -0.096269 431310 0 0 121570 0 0 445110 0 0 133270 0 0 116030 0 0 454660 0 0 133640 0 0 241770 0 0 127920 0 0 212980 0 0 408180 0 0 114910 0 0 443420 0 0 141290 0 0 137420 0 0 439110 0 0 135030 0 0 257180 0 0 126460 0 0 206140 0 0 11 0 0 11 0 0 11 0 0 11 0 0 11 0 0 11 0 0 11 0 0 11 0 0 11 0 0 11 0 0 1235500000 1235500000 0 0 119.77 615 380 5 5 417;1646 446;1734;1735;1737 481;1873;1874;1875;1876;1878 535;536;2086;2087;2088;2089;2090;2092;2093;2094;2095 1873 2086 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9854 1878 2093 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16524 1878 2093 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16524 P13796 257 P13796 P13796 Plastin-2 LCP1 sp|P13796|PLSL_HUMAN Plastin-2 OS=Homo sapiens GN=LCP1 PE=1 SV=6 1 178.488 2.03795E-09 178.49 147.62 178.49 1 S LSRNEALIALLREGESLEDLMKLSPEELLLR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX EGES(1)LEDLMK EGES(178.49)LEDLMK 4 2 0.49353 32591 0 0 27432 0 0 32303 0 0 25677 0 0 47093 0 0 32253 0 0 45596 0 0 36977 0 0 30326 0 0 159820 0 0 30838 0 0 25904 0 0 32722 0 0 26577 0 0 46881 0 0 32395 0 0 46067 0 0 41724 0 0 30570 0 0 151350 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 24936000 24936000 0 0 NaN 616 380 257 257 957 1011 1096 1210;1211 1096 1211 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19646 1096 1211 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19646 1096 1211 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19646 P13807 698 P13807 P13807 Glycogen [starch] synthase, muscle GYS1 sp|P13807|GYS1_HUMAN Glycogen [starch] synthase, muscle OS=Homo sapiens GN=GYS1 PE=1 SV=2 0.992808 23.9976 0.000220464 109.83 92.623 109.83 1 S KDRRNIRAPEWPRRASCTSSTSGSKRNSVDT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX RAS(0.993)CT(0.002)S(0.004)S(0.001)TSGSK RAS(24)CT(-26.14)S(-24)S(-31.02)T(-44.79)S(-51.51)GS(-68.5)K 3 2 0.66805 3076.5 0 0 2465.9 0 0 3589.8 0 0 2792 0 0 2903.3 0 0 3194.5 0 0 3450.3 0 0 3702.4 0 0 2957.3 0 0 26179 0 0 2913.1 0 0 2331.3 0 0 3577.9 0 0 2853.3 0 0 2994.1 0 0 3239.7 0 0 3472.3 0 0 4482.9 0 0 2938.9 0 0 24737 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5577900 5577900 0 0 NaN 617 382 698 698 3189 3382 3614 4005 3614 4005 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5392 3614 4005 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5392 3614 4005 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5392 P13861 99 P13861 P13861 cAMP-dependent protein kinase type II-alpha regulatory subunit PRKAR2A sp|P13861|KAP2_HUMAN cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Homo sapiens GN=PRKAR2A PE=1 SV=2 0.999889 39.5409 1.20188E-11 200.06 184.47 200.06 1 S EDLEVPVPSRFNRRVSVCAETYNPDEEEEDT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RVS(1)VCAETYNPDEEEEDTDPR RVS(39.54)VCAET(-39.54)Y(-108.03)NPDEEEEDT(-118.34)DPR 3 3 0.23615 5810.8 0 0 5187.6 0 0 5902.9 0 0 4638.7 0 0 6681.7 0 0 6343.6 0 0 7280.6 0 0 6299.6 0 0 5252 0 0 6626.6 0 0 5498.9 0 0 4897.4 0 0 5949.3 0 0 4823.7 0 0 6741.2 0 0 6294.3 0 0 7326.7 0 0 6520.3 0 0 5268.2 0 0 6385.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 33667000 33667000 0 0 NaN 618 383 99 99 3560 3780 4030 4477 4030 4477 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12123 4030 4477 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12123 4030 4477 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12123 P13984 248 P13984 P13984 General transcription factor IIF subunit 2 GTF2F2 sp|P13984|T2FB_HUMAN General transcription factor IIF subunit 2 OS=Homo sapiens GN=GTF2F2 PE=1 SV=2 1 172.687 6.06796E-14 215.02 205.36 215.02 1 S WELKPEYRHYQGEEKSD______________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPXXXXXXXXXXXXXX HYQGEEKS(1)D HY(-172.69)QGEEKS(172.69)D 8 3 -0.34514 19942 0 0 17582 0 0 19528 0 0 16983 0 0 14957 0 0 20854 0 0 13544 0 0 17793 0 0 16758 0 0 7784 0 0 18869 0 0 16605 0 0 19629 0 0 17536 0 0 15431 0 0 20706 0 0 13943 0 0 18201 0 0 16399 0 0 7741.4 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 83293000 83293000 0 0 NaN 619 384 248 248 1764 1863 2010 2240;2241 2010 2240 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6325 2010 2240 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6325 2010 2240 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6325 P13994 40 P13994 P13994 Coiled-coil domain-containing protein 130 CCDC130 sp|P13994|CC130_HUMAN Coiled-coil domain-containing protein 130 OS=Homo sapiens GN=CCDC130 PE=1 SV=2 1 77.2224 0.00882761 77.222 26.379 77.222 1 S RYHNSHPLRERARKLSQGILIIRFEMPYNIW X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX KLS(1)QGILIIR KLS(77.22)QGILIIR 3 3 -0.42242 4839.3 0 0 6113 0 0 3337.3 0 0 5850.4 0 0 6334.3 0 0 4589.1 0 0 6052.4 0 0 4920.6 0 0 5302.1 0 0 4161 0 0 4573.5 0 0 5773.3 0 0 3483 0 0 6002.8 0 0 6246.4 0 0 4668.2 0 0 6153.8 0 0 5048.3 0 0 5263.4 0 0 4031.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8566000 8566000 0 0 NaN 620 385 40 40 2132 2253 2426 2703 2426 2703 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19401 2426 2703 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19401 2426 2703 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19401 P14317 275 P14317 P14317 Hematopoietic lineage cell-specific protein HCLS1 sp|P14317|HCLS1_HUMAN Hematopoietic lineage cell-specific protein OS=Homo sapiens GN=HCLS1 PE=1 SV=3 1 123.284 2.70764E-05 127 112.77 123.28 1 S QVARRQQERKAVTKRSPEAPQPVIAMEEPAV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP S(1)PEAPQPVIAMEEPAVPAPLPK S(123.28)PEAPQPVIAMEEPAVPAPLPK 1 3 0.37 26595 0 0 14620 0 0 23569 0 0 15879 0 0 27788 0 0 23501 0 0 26983 0 0 24904 0 0 18097 0 0 127580 0 0 25155 0 0 13818 0 0 23957 0 0 16349 0 0 27930 0 0 23474 0 0 27262 0 0 28770 0 0 18234 0 0 120710 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 115400000 115400000 0 0 NaN 621 387 275 275 3476;4085 3692;3693;4355;4356 3938;3939;4645;4646 4374;4375;5158;5159 4646 5159 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22085 3939 4375 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19990 3939 4375 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19990 P14859 448 P14859 P14859 POU domain, class 2, transcription factor 1 POU2F1 sp|P14859|PO2F1_HUMAN POU domain, class 2, transcription factor 1 OS=Homo sapiens GN=POU2F1 PE=1 SV=2 0.790379 5.85896 1.99294E-08 174.97 138.2 114.88 1 S KEKRINPPSSGGTSSSPIKAIFPSPTSLVAT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPXXXXXXXXXXXX INPPSSGGTS(0.004)S(0.205)S(0.79)PIK INPPS(-47.63)S(-43.25)GGT(-32.13)S(-22.96)S(-5.86)S(5.86)PIK 12 3 0.29626 30792 0 0 29414 0 0 30967 0 0 30169 0 0 31014 0 0 33613 0 0 31964 0 0 33491 0 0 29133 0 0 16265 0 0 29137 0 0 27791 0 0 31174 0 0 30986 0 0 31481 0 0 33568 0 0 32414 0 0 34089 0 0 28865 0 0 16090 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 113590000 113590000 0 0 NaN 622 390 448 448 1898;3276 2004;3476 2163;3713 2423;4126 2163 2423 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12993 3713 4126 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10621 3713 4126 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10621 P14866 52 P14866 P14866 Heterogeneous nuclear ribonucleoprotein L HNRNPL sp|P14866|HNRPL_HUMAN Heterogeneous nuclear ribonucleoprotein L OS=Homo sapiens GN=HNRNPL PE=1 SV=2 1 75.8965 0.00033049 111.33 90.5 111.33 1 S AAGGGGGGGRYYGGGSEGGRAPKRLKTDNAG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX YYGGGS(1)EGGR Y(-75.9)Y(-83.51)GGGS(75.9)EGGR 6 2 -0.32723 17361 0 0 20728 0 0 17576 0 0 20983 0 0 13357 0 0 16835 0 0 13224 0 0 16660 0 0 20214 0 0 4025.8 0 0 16429 0 0 19583 0 0 17633 0 0 21463 0 0 13808 0 0 17065 0 0 13659 0 0 16840 0 0 19649 0 0 4176.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10928000 10928000 0 0 NaN 623 391 52 52 5455 5811 6205 6907 6205 6907 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7964 6205 6907 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7964 6205 6907 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7964 P14868 10 P14868 P14868 Aspartate--tRNA ligase, cytoplasmic DARS sp|P14868|SYDC_HUMAN Aspartate--tRNA ligase, cytoplasmic OS=Homo sapiens GN=DARS PE=1 SV=2 1 55.4006 0.0399643 55.401 20.513 55.401 1 S ______MPSASASRKSQEKPREIMDAAEDYA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPXXXXXXXXXX KS(1)QEKPR KS(55.4)QEKPR 2 3 -0.011808 13869 0 0 17084 0 0 14562 0 0 17226 0 0 14139 0 0 14641 0 0 13743 0 0 17130 0 0 17801 0 0 1785.9 0 0 13126 0 0 16140 0 0 14618 0 0 17637 0 0 14371 0 0 14825 0 0 14119 0 0 17140 0 0 17392 0 0 2078.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23919000 23919000 0 0 NaN 624 392 10 10 2223 2349 2530 2825 2530 2825 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6198 2530 2825 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6198 2530 2825 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6198 P15056 446 P15056 P15056 Serine/threonine-protein kinase B-raf BRAF sp|P15056|BRAF_HUMAN Serine/threonine-protein kinase B-raf OS=Homo sapiens GN=BRAF PE=1 SV=4 0.93811 11.8063 2.36899E-07 139.22 117 139.22 1 S SSEDRNRMKTLGRRDSSDDWEIPDGQITVGQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RDS(0.938)S(0.062)DDWEIPDGQITVGQR RDS(11.81)S(-11.81)DDWEIPDGQIT(-115.78)VGQR 3 3 -0.86333 15571 0 0 12279 0 0 14437 0 0 15251 0 0 23334 0 0 14640 0 0 22238 0 0 17549 0 0 13087 0 0 50334 0 0 14730 0 0 11617 0 0 14709 0 0 15468 0 0 23130 0 0 14833 0 0 22438 0 0 19007 0 0 13301 0 0 47802 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 25986000 25986000 0 0 NaN 625 394 446 446 3216 3410 3644 4040;4041 3644 4041 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17173 3644 4041 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17173 3644 4041 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17173 P15056 151 P15056 P15056 Serine/threonine-protein kinase B-raf BRAF sp|P15056|BRAF_HUMAN Serine/threonine-protein kinase B-raf OS=Homo sapiens GN=BRAF PE=1 SV=4 0.964711 14.3676 0.0331842 58.159 45.798 58.159 1 S SVFQNPTDVARSNPKSPQKPIVRVFLPNKQR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX S(0.035)NPKS(0.965)PQKPIVR S(-14.37)NPKS(14.37)PQKPIVR 5 3 0.98496 18161 0 0 21057 0 0 15998 0 0 22859 0 0 11617 0 0 17626 0 0 11535 0 0 17258 0 0 25747 0 0 6267.4 0 0 17177 0 0 19902 0 0 16180 0 0 23277 0 0 12060 0 0 17908 0 0 12135 0 0 17514 0 0 24802 0 0 6300.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18932000 18932000 0 0 NaN 626 394 151 151 4046 4315 4604 5114 4604 5114 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9612 4604 5114 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9612 4604 5114 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9612 P15056 363 P15056 P15056 Serine/threonine-protein kinase B-raf BRAF sp|P15056|BRAF_HUMAN Serine/threonine-protein kinase B-raf OS=Homo sapiens GN=BRAF PE=1 SV=4 0.362715 0 5.87548E-17 227.25 201.12 227.25 S PADEDHRNQFGQRDRSSSAPNVHINTIEPVN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.363)S(0.363)S(0.275)APNVHINTIEPVNIDDLIR S(0)S(0)S(-1.21)APNVHINT(-120.88)IEPVNIDDLIR 1 3 -0.70268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 627 394 363 363 4416 4704 5008 5556 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22656 5008 5556 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22656 5008 5556 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22656 P15056 364 P15056 P15056 Serine/threonine-protein kinase B-raf BRAF sp|P15056|BRAF_HUMAN Serine/threonine-protein kinase B-raf OS=Homo sapiens GN=BRAF PE=1 SV=4 0.362715 0 5.87548E-17 227.25 201.12 227.25 S ADEDHRNQFGQRDRSSSAPNVHINTIEPVNI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.363)S(0.363)S(0.275)APNVHINTIEPVNIDDLIR S(0)S(0)S(-1.21)APNVHINT(-120.88)IEPVNIDDLIR 2 3 -0.70268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 628 394 364 364 4416 4704 5008 5556 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22656 5008 5556 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22656 5008 5556 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22656 P15880 264 P15880 P15880 40S ribosomal protein S2 RPS2 sp|P15880|RS2_HUMAN 40S ribosomal protein S2 OS=Homo sapiens GN=RPS2 PE=1 SV=2 0.850655 7.56436 0.000342596 100.77 74.651 100.77 1 S SYLTPDLWKETVFTKSPYQEFTDHLVKTHTR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(0.851)PY(0.149)QEFTDHLVK S(7.56)PY(-7.56)QEFT(-34.52)DHLVK 1 3 -0.2037 7277.4 0 0 7276.2 0 0 7047.2 0 0 8091.7 0 0 4614.6 0 0 8194.9 0 0 5916.3 0 0 8215.5 0 0 8899.5 0 0 7612.1 0 0 6885.4 0 0 6878.2 0 0 7082.1 0 0 8260.2 0 0 4847.8 0 0 8224.2 0 0 6041.5 0 0 8469.3 0 0 8654.6 0 0 7357.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10501000 10501000 0 0 NaN 629 396 264 264 4214 4492 4787 5313 4787 5313 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18949 4787 5313 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18949 4787 5313 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18949 P15880 281 P15880 P15880 40S ribosomal protein S2 RPS2 sp|P15880|RS2_HUMAN 40S ribosomal protein S2 OS=Homo sapiens GN=RPS2 PE=1 SV=2 0.998832 29.8266 0.00546549 84.169 52.01 84.169 1 S YQEFTDHLVKTHTRVSVQRTQAPAVATT___ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX THT(0.001)RVS(0.999)VQR T(-38.91)HT(-29.83)RVS(29.83)VQR 6 3 0.44948 8977.5 0 0 6009.5 0 0 9609.2 0 0 5684.4 0 0 7526 0 0 9391.1 0 0 7166 0 0 7162.6 0 0 5948.1 0 0 2115.9 0 0 8497.3 0 0 5675.1 0 0 9613.5 0 0 5915.9 0 0 7754.2 0 0 9223.7 0 0 7278.3 0 0 7334.7 0 0 5920.6 0 0 2158.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 32335000 32335000 0 0 NaN 630 396 281 281 4743 5058 5390 5993 5390 5993 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5292 5390 5993 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5292 5390 5993 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5292 P15884 92 P15884 P15884 Transcription factor 4 TCF4 sp|P15884|ITF2_HUMAN Transcription factor 4 OS=Homo sapiens GN=TCF4 PE=1 SV=3 0.999984 50.7339 0.00285607 93.849 65.998 93.849 1 S YDHMTSRDLGSHDNLSPPFVNSRIQSKTERG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPXXXXXXXX DLGSHDNLS(1)PPFVNSR DLGS(-51.5)HDNLS(50.73)PPFVNS(-50.73)R 9 3 0.92621 5437.2 0 0 6646.2 0 0 4187.4 0 0 6658.7 0 0 7733.8 0 0 6088.1 0 0 7030.6 0 0 5963.1 0 0 6654.7 0 0 5786.4 0 0 5140.3 0 0 6278.5 0 0 4330.4 0 0 6827 0 0 7628.6 0 0 6137.2 0 0 7180 0 0 6160.7 0 0 6582.1 0 0 5586.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9801500 9801500 0 0 NaN 631 397 92 92 737 781 832 919 832 919 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16077 832 919 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16077 832 919 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16077 P15923 379 P15923 P15923 Transcription factor E2-alpha TCF3 sp|P15923|TFE2_HUMAN Transcription factor E2-alpha OS=Homo sapiens GN=TCF3 PE=1 SV=1 0.975827 16.0605 9.13362E-32 301.93 265.03 301.93 1 S AGTSQWPRAGAPGALSPSYDGGLHGLQSKIE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPXX AGAPGALS(0.976)PS(0.024)YDGGLHGLQSK AGAPGALS(16.06)PS(-16.06)Y(-184.39)DGGLHGLQS(-189.19)K 8 3 -0.13051 13749 0 0 29761 0 0 13320 0 0 24248 0 0 26797 0 0 17358 0 0 47203 0 0 30961 0 0 31667 0 0 12756 0 0 13009 0 0 28083 0 0 13640 0 0 25123 0 0 26672 0 0 17901 0 0 46643 0 0 30913 0 0 31904 0 0 12728 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 126210000 126210000 0 0 NaN 632 398 379 379 185 193 208 233 208 233 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16180 208 233 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16180 208 233 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16180 P15923 139 P15923 P15923 Transcription factor E2-alpha TCF3 sp|P15923|TFE2_HUMAN Transcription factor E2-alpha OS=Homo sapiens GN=TCF3 PE=1 SV=1 0.799759 6.01447 1.44695E-07 142.16 122.78 142.16 1 S GFLSGELALNSPGPLSPSGMKGTSQYYPSYS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX DAGVGGLTQAGFLSGELALNSPGPLS(0.8)PS(0.2)GMK DAGVGGLT(-124.72)QAGFLS(-87.48)GELALNS(-46.38)PGPLS(6.01)PS(-6.01)GMK 26 4 1.0259 5466.9 0 0 5965.4 0 0 4437.4 0 0 6406.5 0 0 6639.6 0 0 5944.9 0 0 6173.7 0 0 6622.3 0 0 6621.9 0 0 28076 0 0 5169.2 0 0 5637.8 0 0 4553.4 0 0 6543.7 0 0 6601.6 0 0 6040.9 0 0 6319 0 0 7462.3 0 0 6514.8 0 0 26590 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27205000 27205000 0 0 NaN 633 398 139 139 636 678 723 803 723 803 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23533 723 803 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23533 723 803 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23533 P15976 116 P15976 P15976 Erythroid transcription factor GATA1 sp|P15976|GATA1_HUMAN Erythroid transcription factor OS=Homo sapiens GN=GATA1 PE=1 SV=1 0.995073 23.0529 1.05103E-17 227.58 204.59 227.58 1 S TGLYPASTVCPTREDSPPQAVEDLDGKGSTS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPXXXX TGLYPASTVCPT(0.005)REDS(0.995)PPQAVEDLDGK T(-101.9)GLY(-132.86)PAS(-71.66)T(-71.66)VCPT(-23.05)REDS(23.05)PPQAVEDLDGK 16 4 0.79224 4980.2 0 0 16407 0 0 5511.7 0 0 15624 0 0 15532 0 0 5626.4 0 0 19230 0 0 13718 0 0 18491 0 0 22775 0 0 4714.5 0 0 15495 0 0 5649.1 0 0 15929 0 0 15222 0 0 6230.2 0 0 19376 0 0 14133 0 0 18277 0 0 21763 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 20228000 20228000 0 0 NaN 634 400 116 116 4721 5032 5361 5961;5962 5361 5962 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18396 5361 5962 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18396 5361 5962 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18396 P16070 706 P16070 P16070 CD44 antigen CD44 sp|P16070|CD44_HUMAN CD44 antigen OS=Homo sapiens GN=CD44 PE=1 SV=3 1 139.727 2.34027E-06 139.73 85.323 139.73 1 S VEDRKPSGLNGEASKSQEMVHLVNKESSETP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPXXXXXX S(1)QEMVHLVNK S(139.73)QEMVHLVNK 1 3 -0.44846 9384.2 0 0 5477.9 0 0 11057 0 0 6763.9 0 0 18959 0 0 9605.4 0 0 19632 0 0 11816 0 0 5305.7 0 0 2251.2 0 0 8886.1 0 0 5182.1 0 0 11136 0 0 6912.2 0 0 18769 0 0 9533.1 0 0 19559 0 0 11834 0 0 5842.7 0 0 2393.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 48079000 48079000 0 0 NaN 635 401 706 706 4225 4503 4799 5325 4799 5325 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14824 4799 5325 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14824 4799 5325 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14824 P16104 140 P16104 P16104 Histone H2AX H2AFX sp|P16104|H2AX_HUMAN Histone H2AX OS=Homo sapiens GN=H2AFX PE=1 SV=2 1 65.5055 2.2493E-05 151.22 130.32 151.22 1 S VGPKAPSGGKKATQASQEY____________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX ATQAS(1)QEY AT(-65.51)QAS(65.51)QEY(-94.5) 5 2 0.62652 61700 0 0 48781 0 0 57801 0 0 48151 0 0 119030 0 0 60843 0 0 131970 0 0 73106 0 0 49573 0 0 13241 0 0 58370 0 0 46078 0 0 59200 0 0 49683 0 0 117280 0 0 60598 0 0 131460 0 0 73255 0 0 52409 0 0 14160 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 340750000 340750000 0 0 NaN 636 402 140 140 530;2019 563;2136;2137 604;2302 676;2569 604 676 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8597 604 676 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8597 604 676 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8597 P16150 336 P16150 P16150 Leukosialin SPN sp|P16150|LEUK_HUMAN Leukosialin OS=Homo sapiens GN=SPN PE=1 SV=1 0.966081 14.6279 5.43491E-07 145.83 112.11 119.14 1 S GSGGDKGSGFPDGEGSSRRPTLTTFFGRRKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY) XXXXXXPPPPPPPPPPPPPPPPPPPPPPXXX GSGFPDGEGS(0.966)S(0.033)RRPTLTTFFGR GS(-79.05)GFPDGEGS(14.63)S(-14.63)RRPT(-33.6)LT(-39.01)T(-40.15)FFGR 10 4 -0.20895 23777 0 0 33695 0 0 22779 0 0 32345 0 0 52230 0 0 25522 0 0 56050 0 0 37659 0 0 33646 0 0 19460 0 0 22495 0 0 31823 0 0 23362 0 0 33184 0 0 51297 0 0 26075 0 0 56257 0 0 37890 0 0 34149 0 0 19196 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 109910000 109910000 0 0 NaN 637 403 336 336 1608;1609;2819 1694;1695;2989 1830;1831 2035;2036 1831 2036 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18916 1830 2035 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9262 1830 2035 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9262 P16150 322 P16150 P16150 Leukosialin SPN sp|P16150|LEUK_HUMAN Leukosialin OS=Homo sapiens GN=SPN PE=1 SV=1 0.986535 19.6696 5.41329E-13 183.52 167.83 183.52 1 S AQVPEEGAVTVTVGGSGGDKGSGFPDGEGSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP NGVVDAWAGPAQVPEEGAVTVT(0.002)VGGS(0.987)GGDKGS(0.011)GFPDGEGSSR NGVVDAWAGPAQVPEEGAVT(-46.09)VT(-26.11)VGGS(19.67)GGDKGS(-19.67)GFPDGEGS(-37.73)S(-36.65)R 26 4 0.55748 1094.9 0 0 2243.2 0 0 2716.7 0 0 3083.4 0 0 2786.4 0 0 1093.4 0 0 3616 0 0 6356.8 0 0 2573.7 0 0 72043 0 0 1042.1 0 0 2123.9 0 0 2644.8 0 0 3082.7 0 0 2834.3 0 0 1199.7 0 0 3612.4 0 0 8343.2 0 0 2583.7 0 0 67984 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 1 0 0 2 0 0 2 0 0 2 0 0 2 0 0 14118000 14118000 0 0 NaN 638 403 322 322 2819 2989 3202 3554;3555 3202 3554 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20200 3202 3554 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20200 3202 3554 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20200 P16150 355 P16150 P16150 Leukosialin SPN sp|P16150|LEUK_HUMAN Leukosialin OS=Homo sapiens GN=SPN PE=1 SV=1 1 73.1099 8.07802E-05 127.71 38.309 73.11 1;2 S PTLTTFFGRRKSRQGSLAMEELKSGSGPSLK X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;Oxidation (M);X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX S(1)RQGS(1)LAMEELK S(73.11)RQGS(73.11)LAMEELK 5 3 -0.342 21689 5836.4 0 24246 8701.2 0 23248 7657 0 28094 8461.6 0 81162 11965 0 23045 8021.5 0 84583 13929 0 41540 10867 0 25743 9018.4 0 6106.4 6410.2 0 20529 5529.5 0 22926 8218.4 0 24036 7661.9 0 28530 8695.7 0 78937 11911 0 23568 8107.8 0 84323 13949 0 41135 10983 0 27896 9106.7 0 6711.3 6287.5 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 331170000 319790000 11382000 0 NaN 639 403 355 355 3040;4273 3223;3224;4552;4553 3448;3449;4853 3821;3822;5385 4853 5385 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15776 3449 3822 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16854 3449 3822 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16854 P16150 363 P16150 P16150 Leukosialin SPN sp|P16150|LEUK_HUMAN Leukosialin OS=Homo sapiens GN=SPN PE=1 SV=1 0.354479 0 7.60218E-13 198.21 187.95 198.21 S RRKSRQGSLAMEELKSGSGPSLKGEEEPLVA X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;Oxidation (M);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.354)GS(0.354)GPS(0.291)LKGEEEPLVASEDGAVDAPAPDEPEGGDGAAP S(0)GS(0)GPS(-0.86)LKGEEEPLVAS(-85.61)EDGAVDAPAPDEPEGGDGAAP 1 4 0.82253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 640 403 363 363 3807 4056 4327 4807 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17967 4327 4807 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17967 4327 4807 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17967 P16150 365 P16150 P16150 Leukosialin SPN sp|P16150|LEUK_HUMAN Leukosialin OS=Homo sapiens GN=SPN PE=1 SV=1 0.354479 0 7.60218E-13 198.21 187.95 198.21 S KSRQGSLAMEELKSGSGPSLKGEEEPLVASE X;Phospho (STY);X;X;X;Phospho (STY);X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.354)GS(0.354)GPS(0.291)LKGEEEPLVASEDGAVDAPAPDEPEGGDGAAP S(0)GS(0)GPS(-0.86)LKGEEEPLVAS(-85.61)EDGAVDAPAPDEPEGGDGAAP 3 4 0.82253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 641 403 365 365 3807 4056 4327 4807 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17967 4327 4807 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17967 4327 4807 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17967 P16150 368 P16150 P16150 Leukosialin SPN sp|P16150|LEUK_HUMAN Leukosialin OS=Homo sapiens GN=SPN PE=1 SV=1 0.948782 15.2453 4.80772E-26 273.1 252.17 273.1 1 S QGSLAMEELKSGSGPSLKGEEEPLVASEDGA X;X;Phospho (STY);X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP S(0.028)GS(0.023)GPS(0.949)LKGEEEPLVASEDGAVDAPAPDEPEGGDGAAP S(-15.25)GS(-16.18)GPS(15.25)LKGEEEPLVAS(-101.63)EDGAVDAPAPDEPEGGDGAAP 6 3 0.12979 1035.2 0 0 1436.9 0 0 999.01 0 0 1031.2 0 0 5447.5 0 0 1374.7 0 0 5425.2 0 0 2891.4 0 0 1722.2 0 0 6759.7 0 0 979.45 0 0 1355.1 0 0 1062.5 0 0 1089.1 0 0 5261.7 0 0 1394.4 0 0 5422 0 0 3045.2 0 0 1856.3 0 0 6432 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14127000 14127000 0 0 1.2313 642 403 368 368 3807 4056 4328 4809 4328 4809 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17995 4328 4809 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17995 4328 4809 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17995 P16150 351 P16150 P16150 Leukosialin SPN sp|P16150|LEUK_HUMAN Leukosialin OS=Homo sapiens GN=SPN PE=1 SV=1 1 73.1099 1.68123E-16 238.08 139.72 73.11 1;2 S SSRRPTLTTFFGRRKSRQGSLAMEELKSGSG Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;Oxidation (M);X;X;X;X;Phospho (STY);X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(1)RQGS(1)LAMEELK S(73.11)RQGS(73.11)LAMEELK 1 3 -0.342 16575 5836.4 0 21277 8701.2 0 17380 7657 0 22044 8461.6 0 55003 11965 0 16551 8021.5 0 61824 13929 0 33234 10867 0 20676 9018.4 0 3415.5 6410.2 0 15687 5529.5 0 20104 8218.4 0 17927 7661.9 0 22499 8695.7 0 53654 11911 0 17050 8107.8 0 61477 13949 0 32792 10983 0 22146 9106.7 0 3985.2 6287.5 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 195730000 184350000 11382000 0 NaN 643 403 351 351 4273 4552;4553 4852;4853 5384;5385 4853 5385 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15776 4852 5384 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14751 4852 5384 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14751 P16150 291 P16150 P16150 Leukosialin SPN sp|P16150|LEUK_HUMAN Leukosialin OS=Homo sapiens GN=SPN PE=1 SV=1 0.999997 55.6903 0.0333184 58.63 43.765 58.63 1 S LWRRRQKRRTGALVLSRGGKRNGVVDAWAGP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPXXXXXXXXXXXXXX TGALVLS(1)R T(-55.69)GALVLS(55.69)R 7 2 -0.53157 15063 0 0 30077 0 0 15399 0 0 30551 0 0 38036 0 0 14925 0 0 36366 0 0 27258 0 0 31568 0 0 8542.5 0 0 14254 0 0 28415 0 0 15761 0 0 31089 0 0 37235 0 0 15828 0 0 36966 0 0 27121 0 0 31351 0 0 8674.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 121370000 121370000 0 0 NaN 644 403 291 291 4716 5027 5354 5949 5354 5949 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13144 5354 5949 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13144 5354 5949 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13144 P16157 429 P16157 P16157 Ankyrin-1 ANK1 sp|P16157|ANK1_HUMAN Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3 0.988267 19.2545 0.0118423 78.985 46.38 78.985 1 S MGHLPIVKNLLQRGASPNVSNVKVETPLHMA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX GAS(0.988)PNVS(0.012)NVK GAS(19.25)PNVS(-19.25)NVK 3 2 1.1898 11052 0 0 36779 0 0 11207 0 0 32782 0 0 21817 0 0 9929.2 0 0 22038 0 0 24379 0 0 37340 0 0 9614.9 0 0 10458 0 0 34721 0 0 11406 0 0 33536 0 0 21531 0 0 11172 0 0 22841 0 0 24184 0 0 36194 0 0 9617.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12662000 12662000 0 0 NaN 645 404 429 429 1373 1448 1556 1720 1556 1720 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10350 1556 1720 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10350 1556 1720 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10350 P16157 1686 P16157 P16157 Ankyrin-1 ANK1 sp|P16157|ANK1_HUMAN Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3 0.978225 16.526 1.06646E-15 220.32 187.24 220.32 1 S SLVSGHQRGQARITHSPTVSQVTERSQDRLQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX ITHS(0.978)PT(0.022)VSQVTER IT(-54.44)HS(16.53)PT(-16.53)VS(-56.51)QVT(-87.39)ER 4 2 0.45926 8203.7 0 0 21909 0 0 7690.3 0 0 18774 0 0 18914 0 0 10009 0 0 21526 0 0 19019 0 0 21991 0 0 4608.5 0 0 7760.9 0 0 20679 0 0 7915.5 0 0 19327 0 0 18569 0 0 10545 0 0 21799 0 0 18867 0 0 21679 0 0 4779.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24798000 24798000 0 0 NaN 646 404 1686 1686 1962 2073 2237 2499 2237 2499 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9893 2237 2499 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9893 2237 2499 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9893 P16157 856 P16157 P16157 Ankyrin-1 ANK1 sp|P16157|ANK1_HUMAN Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3 1 138.281 3.42645E-06 138.28 87.821 138.28 1 S KELLDFVPKLDQVVESPAIPRIPCAMPETVV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX LDQVVES(1)PAIPR LDQVVES(138.28)PAIPR 7 2 0.51232 7199.5 0 0 18832 0 0 6438.1 0 0 19832 0 0 16986 0 0 6185.9 0 0 16887 0 0 15018 0 0 21281 0 0 18438 0 0 6809.7 0 0 17796 0 0 6655.5 0 0 20083 0 0 16617 0 0 6954.9 0 0 17314 0 0 15277 0 0 20811 0 0 17710 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26924000 26924000 0 0 NaN 647 404 856 856 2316 2449 2638 2949 2638 2949 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17122 2638 2949 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17122 2638 2949 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17122 P16220 271 P16220 P16220 Cyclic AMP-responsive element-binding protein 1 CREB1 sp|P16220|CREB1_HUMAN Cyclic AMP-responsive element-binding protein 1 OS=Homo sapiens GN=CREB1 PE=1 SV=2 0.98794 19.1608 1.84877E-07 142.68 132.34 142.68 1 S TAPTSTIAPGVVMASSPALPTQPAEEAARKR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPPXX TAPTSTIAPGVVMAS(0.012)S(0.988)PALPTQPAEEAAR T(-96.27)APT(-91.24)S(-86.04)T(-80.2)IAPGVVMAS(-19.16)S(19.16)PALPT(-41.24)QPAEEAAR 16 3 0.24058 3043.7 0 0 2727.4 0 0 3308.2 0 0 2661.4 0 0 2303.2 0 0 2587.9 0 0 3036.2 0 0 3037 0 0 2079.8 0 0 14029 0 0 2881.1 0 0 2576.1 0 0 3305 0 0 2735.5 0 0 2406.1 0 0 2629.3 0 0 3029.2 0 0 3451.7 0 0 2092.7 0 0 13280 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25265000 25265000 0 0 NaN 648 405 271 271 4620 4928 5249 5830 5249 5830 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18947 5249 5830 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18947 5249 5830 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18947 P16298 478 P16298 P16298 Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform PPP3CB sp|P16298|PP2BB_HUMAN Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Homo sapiens GN=PPP3CB PE=1 SV=2 1 117.022 0.000929641 117.02 61.473 117.02 1 S AEKAIRGFSPPHRICSFEEAKGLDRINERMP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX ICS(1)FEEAK ICS(117.02)FEEAK 3 2 -0.20081 45049 0 0 16994 0 0 43352 0 0 16509 0 0 23791 0 0 42049 0 0 22548 0 0 27222 0 0 19304 0 0 13067 0 0 42622 0 0 16051 0 0 43509 0 0 17391 0 0 25278 0 0 40847 0 0 22922 0 0 28274 0 0 19185 0 0 12934 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 36378000 36378000 0 0 NaN 649 406 478 478 1782 1881 2028 2259 2028 2259 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16095 2028 2259 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16095 2028 2259 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16095 P16401;P16403 173;173 P16401;P16403 P16401 Histone H1.5;Histone H1.2 HIST1H1B;HIST1H1C sp|P16401|H15_HUMAN Histone H1.5 OS=Homo sapiens GN=HIST1H1B PE=1 SV=3;sp|P16403|H12_HUMAN Histone H1.2 OS=Homo sapiens GN=HIST1H1C PE=1 SV=2 1 87.2981 0.0124856 87.298 41.14 87.298 1 S AKKPAAATVTKKVAKSPKKAKVAKPKKAAKS;KAKKPAAAGVKKVAKSPKKAKAAAKPKKATK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX KVAKS(1)PK KVAKS(87.3)PK 5 2 -0.25927 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 650 407;409 173;173 173 2256 2384 2566 2864 2566 2864 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8252 2566 2864 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8252 2566 2864 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8252 P16401 2 P16401 P16401 Histone H1.5 HIST1H1B sp|P16401|H15_HUMAN Histone H1.5 OS=Homo sapiens GN=HIST1H1B PE=1 SV=3 0.499992 0 5.75142E-07 103.88 91.833 103.88 1 S ______________MSETAPAETATPAPVEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.5)ET(0.5)APAETATPAPVEK S(0)ET(0)APAET(-45.05)AT(-60.43)PAPVEK 1 2 0.90741 38860 0 0 22955 0 0 40187 0 0 26955 0 0 36780 0 0 37736 0 0 40375 0 0 37224 0 0 27586 0 0 17113 0 0 36776 0 0 21708 0 0 40354 0 0 27606 0 0 37564 0 0 37369 0 0 40575 0 0 37874 0 0 27762 0 0 16975 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 450300000 450300000 0 0 34.361 651 407 2 2 3721;3722;3723 3959;3960;3961;3962;3963;3964 4220 4688;4689 4220 4689 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13070 4220 4689 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13070 4220 4689 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13070 P16401 18 P16401 P16401 Histone H1.5 HIST1H1B sp|P16401|H15_HUMAN Histone H1.5 OS=Homo sapiens GN=HIST1H1B PE=1 SV=3 1 63.942 1.34194E-31 263.54 241.95 263.54 1;2 S ETAPAETATPAPVEKSPAKKKATKKAAGAGA X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX SETAPAETATPAPVEKS(1)PAK S(-212.15)ET(-207.06)APAET(-132.21)AT(-63.94)PAPVEKS(63.94)PAK 17 4 0.389 582040 25058 0 137770 9593.5 0 621130 25320 0 149520 9817.8 0 222890 15858 0 573430 25855 0 251620 16277 0 332370 16658 0 145040 9718.4 0 102240 12921 0 550900 23712 0 130220 9063.9 0 618380 25366 0 159620 10325 0 250010 16652 0 553030 25109 0 251820 16369 0 345810 17455 0 147630 9867.3 0 103960 12552 0 9 2 0 9 2 0 9 2 0 9 2 0 9 2 0 9 2 0 9 2 0 9 2 0 9 2 0 9 2 0 27553000000 27492000000 61113000 0 NaN 652 407 18 18 3722;3723 3960;3961;3962;3963;3964 4221;4222;4223;4224;4225;4226;4227 4690;4691;4692;4693;4694;4695;4696;4697;4698;4699;4700 4222 4692 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11518 4222 4692 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11518 4223 4693 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12294 P16402 189 P16402 P16402 Histone H1.3 HIST1H1D sp|P16402|H13_HUMAN Histone H1.3 OS=Homo sapiens GN=HIST1H1D PE=1 SV=2 1 47.3342 0.0342436 47.334 11.017 47.334 1 S SAKKVKTPQPKKAAKSPAKAKAPKPKAAKPK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX AAKS(1)PAK AAKS(47.33)PAK 4 3 -0.58954 28002 0 0 40525 0 0 28353 0 0 38530 0 0 20253 0 0 25888 0 0 21294 0 0 27748 0 0 39273 0 0 3549.4 0 0 26498 0 0 38271 0 0 28432 0 0 39480 0 0 21063 0 0 26543 0 0 22118 0 0 27868 0 0 37988 0 0 3984.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 44017000 44017000 0 0 NaN 653 408 189 189 41 44 48 58 48 58 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7060 48 58 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7060 48 58 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7060 P16402 2 P16402 P16402 Histone H1.3 HIST1H1D sp|P16402|H13_HUMAN Histone H1.3 OS=Homo sapiens GN=HIST1H1D PE=1 SV=2 0.49984 0 5.27861E-05 57.499 44.923 57.499 S ______________MSETAPLAPTIPAPAEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.5)ET(0.5)APLAPTIPAPAEK S(0)ET(0)APLAPT(-31.94)IPAPAEK 1 3 -0.036645 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 654 408 2 2 3724;3725 3965;3966 4228 4701 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19212 4228 4701 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19212 4228 4701 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19212 P16403 36 P16403 P16403 Histone H1.2 HIST1H1C sp|P16403|H12_HUMAN Histone H1.2 OS=Homo sapiens GN=HIST1H1C PE=1 SV=2 0.996656 24.759 4.46575E-05 130.36 82.827 130.36 1 S KKKAAKKAGGTPRKASGPPVSELITKAVAAS X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX KAS(0.997)GPPVS(0.003)ELITK KAS(24.76)GPPVS(-24.76)ELIT(-49.08)K 3 3 0.74078 12852 0 0 34868 0 0 13760 0 0 38838 0 0 16281 0 0 14623 0 0 17103 0 0 25816 0 0 42683 0 0 6722.7 0 0 12164 0 0 32961 0 0 13836 0 0 39246 0 0 16409 0 0 15891 0 0 18070 0 0 25664 0 0 41031 0 0 6927.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 232610000 232610000 0 0 NaN 655 409 36 36 2010 2125 2290 2557 2290 2557 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17474 2290 2557 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17474 2290 2557 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17474 P16403 2 P16403 P16403 Histone H1.2 HIST1H1C sp|P16403|H12_HUMAN Histone H1.2 OS=Homo sapiens GN=HIST1H1C PE=1 SV=2 0.5 0 2.88957E-07 42.059 6.4191 42.059 1 S ______________MSETAPAAPAAAPPAEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.5)ET(0.5)APAAPAAAPPAEK S(0)ET(0)APAAPAAAPPAEK 1 3 -0.2997 14304 0 0 22500 0 0 17933 0 0 24496 0 0 14740 0 0 13939 0 0 12685 0 0 20463 0 0 24253 0 0 1495.7 0 0 13549 0 0 21266 0 0 17806 0 0 24860 0 0 15128 0 0 14527 0 0 13327 0 0 20318 0 0 23440 0 0 1882 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 350990000 350990000 0 0 NaN 656 409 2 2 3718 3953 4214 4681 4214 4681 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11590 4214 4681 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11590 4214 4681 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11590 P16615 663 P16615 P16615 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 ATP2A2 sp|P16615|AT2A2_HUMAN Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Homo sapiens GN=ATP2A2 PE=1 SV=1 1 113.523 0.000198851 113.52 88.137 113.52 1 S TSKAFTGREFDELNPSAQRDACLNARCFARV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX EFDELNPS(1)AQR EFDELNPS(113.52)AQR 8 2 -0.1098 22670 0 0 18003 0 0 23260 0 0 19085 0 0 29133 0 0 23215 0 0 27930 0 0 24162 0 0 19859 0 0 12764 0 0 21454 0 0 17013 0 0 23457 0 0 19597 0 0 29193 0 0 23121 0 0 28267 0 0 24584 0 0 19937 0 0 12578 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26015000 26015000 0 0 NaN 657 410 663 663 941 995 1079 1191 1079 1191 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14090 1079 1191 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14090 1079 1191 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14090 P16949 16 P16949 P16949 Stathmin STMN1 sp|P16949|STMN1_HUMAN Stathmin OS=Homo sapiens GN=STMN1 PE=1 SV=3 1 109.183 1.23681E-11 211.41 175.76 109.18 1;2 S MASSDIQVKELEKRASGQAFELILSPRSKES X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX RAS(1)GQAFELILS(1)PR RAS(109.18)GQAFELILS(109.18)PR 3 3 -0.20274 22767 7642.1 0 28536 11251 0 23107 6445 0 29319 10368 0 34613 7677.4 0 20913 8258.1 0 35674 8544.6 0 30017 9201.9 0 31568 11554 0 95241 19086 0 21545 7226.9 0 26961 10623 0 23391 6575.3 0 29921 10665 0 34457 7733.4 0 21631 8419.4 0 36149 8738.4 0 32626 9768.6 0 31323 11273 0 90375 18184 0 4 2 0 4 2 0 4 2 0 4 2 0 4 2 0 4 2 0 4 2 0 4 2 0 4 2 0 4 2 0 652480000 640190000 12288000 0 NaN 658 411 16 16 458;3192 488;3385;3386 525;3618;3619 589;4010;4011;4012;4013;4014 3619 4013 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20335 3618 4010 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19625 3618 4010 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19625 P16949 25 P16949 P16949 Stathmin STMN1 sp|P16949|STMN1_HUMAN Stathmin OS=Homo sapiens GN=STMN1 PE=1 SV=3 1 109.183 6.16342E-16 233.14 212.35 109.18 1;2 S ELEKRASGQAFELILSPRSKESVPEFPLSPP X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X XXXXPPPPPPPPPPPPPPXXXXXXXXXXXXX RAS(1)GQAFELILS(1)PR RAS(109.18)GQAFELILS(109.18)PR 12 3 -0.20274 126390 7642.1 0 107420 11251 0 119860 6445 0 109510 10368 0 42869 7677.4 0 126540 8258.1 0 48312 8544.6 0 91956 9201.9 0 117610 11554 0 78987 19086 0 119570 7226.9 0 101490 10623 0 120130 6575.3 0 112590 10665 0 48192 7733.4 0 125790 8419.4 0 50814 8738.4 0 95959 9768.6 0 113110 11273 0 76504 18184 0 6 2 0 6 2 0 6 2 0 6 2 0 6 2 0 6 2 0 6 2 0 6 2 0 6 2 0 6 2 0 898000000 885710000 12288000 0 NaN 659 411 25 25 458;3192 488;3385;3386 523;524;3617;3619 585;586;587;588;4008;4009;4013;4014 3619 4013 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20335 524 587 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21704 524 587 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21704 P16949 3 P16949 P16949 Stathmin STMN1 sp|P16949|STMN1_HUMAN Stathmin OS=Homo sapiens GN=STMN1 PE=1 SV=3 0.5 0 0.000739667 59.205 50.865 59.205 1 S _____________MASSDIQVKELEKRASGQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X XXXXXXXXXXXXXXPPPPPPPPXXXXXXXXX AS(0.5)S(0.5)DIQVK AS(0)S(0)DIQVK 2 2 -4.2322 106160 0 0 31215 0 0 124570 0 0 29920 0 0 79569 0 0 108820 0 0 73361 0 0 85720 0 0 35240 0 0 9180 0 0 100530 0 0 29480 0 0 123810 0 0 32068 0 0 83281 0 0 105280 0 0 73929 0 0 87155 0 0 36388 0 0 10628 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 72580000 72580000 0 0 NaN 660 411 3 3 493 524 564 629 564 629 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12332 564 629 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12332 564 629 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12332 P16949 4 P16949 P16949 Stathmin STMN1 sp|P16949|STMN1_HUMAN Stathmin OS=Homo sapiens GN=STMN1 PE=1 SV=3 0.5 0 0.000739667 59.205 50.865 59.205 1 S ____________MASSDIQVKELEKRASGQA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AS(0.5)S(0.5)DIQVK AS(0)S(0)DIQVK 3 2 -4.2322 106160 0 0 31215 0 0 124570 0 0 29920 0 0 79569 0 0 108820 0 0 73361 0 0 85720 0 0 35240 0 0 9180 0 0 100530 0 0 29480 0 0 123810 0 0 32068 0 0 83281 0 0 105280 0 0 73929 0 0 87155 0 0 36388 0 0 10628 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 72580000 72580000 0 0 NaN 661 411 4 4 493 524 564 629 564 629 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12332 564 629 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12332 564 629 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12332 P16949;Q93045 46;80 P16949 P16949 Stathmin;Stathmin-2 STMN1;STMN2 sp|P16949|STMN1_HUMAN Stathmin OS=Homo sapiens GN=STMN1 PE=1 SV=3;sp|Q93045|STMN2_HUMAN Stathmin-2 OS=Homo sapiens GN=STMN2 PE=1 SV=3 1 98.4072 0.00215089 98.407 57.244 98.407 1 S SVPEFPLSPPKKKDLSLEEIQKKLEAAEERR X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX DLS(1)LEEIQK DLS(98.41)LEEIQK 3 2 0.91858 9133 0 0 17027 0 0 9780 0 0 15857 0 0 14997 0 0 10199 0 0 14273 0 0 15632 0 0 17139 0 0 28165 0 0 8644.5 0 0 16078 0 0 9873.2 0 0 16262 0 0 14903 0 0 10597 0 0 14642 0 0 16318 0 0 16789 0 0 26882 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18310000 18310000 0 0 NaN 662 411 46 46 746 790 841 928 841 928 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17822 841 928 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17822 841 928 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17822 P16949 38 P16949 P16949 Stathmin STMN1 sp|P16949|STMN1_HUMAN Stathmin OS=Homo sapiens GN=STMN1 PE=1 SV=3 1 120.268 2.20313E-07 155.57 139.35 155.57 1 S ILSPRSKESVPEFPLSPPKKKDLSLEEIQKK X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPXXXXXXXXXXXX ESVPEFPLS(1)PPK ES(-120.27)VPEFPLS(120.27)PPK 9 3 0.31301 83705 0 0 133070 0 0 89734 0 0 125340 0 0 83620 0 0 84514 0 0 90156 0 0 104740 0 0 138030 0 0 19443 0 0 79229 0 0 125660 0 0 89948 0 0 128510 0 0 85356 0 0 86824 0 0 92768 0 0 104860 0 0 134160 0 0 20732 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 1174500000 1174500000 0 0 NaN 663 411 38 38 1174;3883 1235;4137 1333;4414;4415 1475;1476;4908;4909 1333 1476 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20231 1333 1476 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20231 1333 1476 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20231 P16949 63 P16949 P16949 Stathmin STMN1 sp|P16949|STMN1_HUMAN Stathmin OS=Homo sapiens GN=STMN1 PE=1 SV=3 1 152.675 2.3557E-06 152.67 110.7 152.67 1 S EEIQKKLEAAEERRKSHEAEVLKQLAEKREH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX S(1)HEAEVLK S(152.67)HEAEVLK 1 3 -0.42207 97472 0 0 148740 0 0 95110 0 0 145670 0 0 166990 0 0 101340 0 0 168610 0 0 139590 0 0 150710 0 0 34617 0 0 92224 0 0 140490 0 0 96789 0 0 149040 0 0 165220 0 0 104100 0 0 171060 0 0 139580 0 0 149470 0 0 35826 0 0 7 0 0 7 0 0 7 0 0 7 0 0 7 0 0 7 0 0 7 0 0 7 0 0 7 0 0 7 0 0 143340000 143340000 0 0 NaN 664 411 63 63 3302;3832 3503;4085 3740;4358;4359 4154;4155;4156;4844;4845;4846;4847 4359 4847 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10355 4359 4847 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10355 3740 4154 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8900 P16989 370 P16989 P16989 Y-box-binding protein 3 YBX3 sp|P16989|YBOX3_HUMAN Y-box-binding protein 3 OS=Homo sapiens GN=YBX3 PE=1 SV=4 0.741387 4.96134 0.0125004 67.785 48.207 67.785 1 S GEAPTENPAPPTQQSSAE_____________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX AGEAPTENPAPPT(0.022)QQS(0.237)S(0.741)AE AGEAPT(-57.59)ENPAPPT(-15.26)QQS(-4.96)S(4.96)AE 17 3 -0.087237 12758 0 0 14041 0 0 12456 0 0 14064 0 0 15141 0 0 13250 0 0 15878 0 0 15359 0 0 13614 0 0 14775 0 0 12071 0 0 13264 0 0 12594 0 0 14426 0 0 15215 0 0 13371 0 0 16065 0 0 15770 0 0 13529 0 0 14268 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8023700 8023700 0 0 NaN 665 412 370 370 194 202 218 245 218 245 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9463 218 245 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9463 218 245 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9463 P17026 41 P17026 P17026 Zinc finger protein 22 ZNF22 sp|P17026|ZNF22_HUMAN Zinc finger protein 22 OS=Homo sapiens GN=ZNF22 PE=1 SV=3 0.499999 0 0.0115125 85.676 49.281 85.676 1 S TGRQRQKWGMTIRFDSSFSRLRRSLDDKPYK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX FDS(0.5)S(0.5)FSR FDS(0)S(0)FS(-54.22)R 3 2 -0.0088401 14501 0 0 10608 0 0 15521 0 0 11580 0 0 15693 0 0 15819 0 0 16989 0 0 15539 0 0 10847 0 0 3716.2 0 0 13726 0 0 10026 0 0 15575 0 0 11898 0 0 15927 0 0 15671 0 0 17063 0 0 15710 0 0 10963 0 0 3858.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15826000 15826000 0 0 NaN 666 413 41 41 1248 1313 1414 1567 1414 1567 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13495 1414 1567 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13495 1414 1567 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13495 P17026 42 P17026 P17026 Zinc finger protein 22 ZNF22 sp|P17026|ZNF22_HUMAN Zinc finger protein 22 OS=Homo sapiens GN=ZNF22 PE=1 SV=3 0.499999 0 0.0115125 85.676 49.281 85.676 1 S GRQRQKWGMTIRFDSSFSRLRRSLDDKPYKC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FDS(0.5)S(0.5)FSR FDS(0)S(0)FS(-54.22)R 4 2 -0.0088401 14501 0 0 10608 0 0 15521 0 0 11580 0 0 15693 0 0 15819 0 0 16989 0 0 15539 0 0 10847 0 0 3716.2 0 0 13726 0 0 10026 0 0 15575 0 0 11898 0 0 15927 0 0 15671 0 0 17063 0 0 15710 0 0 10963 0 0 3858.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15826000 15826000 0 0 NaN 667 413 42 42 1248 1313 1414 1567 1414 1567 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13495 1414 1567 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13495 1414 1567 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13495 P17026 49 P17026 P17026 Zinc finger protein 22 ZNF22 sp|P17026|ZNF22_HUMAN Zinc finger protein 22 OS=Homo sapiens GN=ZNF22 PE=1 SV=3 0.999988 49.1722 0.00138205 102.52 73.437 102.52 1 S GMTIRFDSSFSRLRRSLDDKPYKCTECEKSF X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX S(1)LDDKPYK S(49.17)LDDKPY(-49.17)K 1 2 0.47689 35087 0 0 10342 0 0 35031 0 0 10592 0 0 8702.7 0 0 34942 0 0 10695 0 0 20944 0 0 10861 0 0 43694 0 0 33201 0 0 9770.8 0 0 34958 0 0 11252 0 0 10414 0 0 33844 0 0 10795 0 0 22868 0 0 10710 0 0 41628 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9809600 9809600 0 0 NaN 668 413 49 49 3919 4177 4458 4956 4458 4956 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12771 4458 4956 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12771 4458 4956 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12771 P17029 13 P17029 P17029 Zinc finger protein with KRAB and SCAN domains 1 ZKSCAN1 sp|P17029|ZKSC1_HUMAN Zinc finger protein with KRAB and SCAN domains 1 OS=Homo sapiens GN=ZKSCAN1 PE=1 SV=3 0.999657 34.6422 1.41143E-22 258.7 221.18 258.7 1 S ___MMTAESREATGLSPQAAQEKDGIVIVKV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPX EATGLS(1)PQAAQEK EAT(-34.64)GLS(34.64)PQAAQEK 6 2 -0.37772 32096 0 0 27937 0 0 31867 0 0 27241 0 0 28617 0 0 30989 0 0 31222 0 0 33023 0 0 30227 0 0 59164 0 0 30371 0 0 26387 0 0 32067 0 0 28073 0 0 29268 0 0 31031 0 0 31629 0 0 34828 0 0 29867 0 0 56474 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 34570000 34570000 0 0 NaN 669 414 13 13 888;889 941;942 1020;1021 1128;1129 1020 1128 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11548 1020 1128 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11548 1020 1128 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11548 P17096 36 P17096 P17096 High mobility group protein HMG-I/HMG-Y HMGA1 sp|P17096|HMGA1_HUMAN High mobility group protein HMG-I/HMG-Y OS=Homo sapiens GN=HMGA1 PE=1 SV=3 0.915817 10.3658 1.47469E-10 183.05 155.19 183.05 1 S TEKRGRGRPRKQPPVSPGTALVGSQKEPSEV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPXXXXX KQPPVS(0.916)PGT(0.084)ALVGSQK KQPPVS(10.37)PGT(-10.37)ALVGS(-81.43)QK 6 3 0.25519 30841 0 0 77903 0 0 34422 0 0 76162 0 0 29836 0 0 31088 0 0 32540 0 0 51344 0 0 85368 0 0 13288 0 0 29197 0 0 73583 0 0 34404 0 0 77582 0 0 30636 0 0 33452 0 0 34439 0 0 51117 0 0 81992 0 0 13700 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 310130000 310130000 0 0 NaN 670 415 36 36 2182 2306 2483 2763 2483 2763 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14545 2483 2763 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14545 2483 2763 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14545 P17096 44 P17096 P17096 High mobility group protein HMG-I/HMG-Y HMGA1 sp|P17096|HMGA1_HUMAN High mobility group protein HMG-I/HMG-Y OS=Homo sapiens GN=HMGA1 PE=1 SV=3 0.999998 56.4958 2.79806E-08 174.55 157.06 174.55 1 S PRKQPPVSPGTALVGSQKEPSEVPTPKRPRG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXPPPPPPPPPPPPPPPPXXXXXXXXXXXXX KQPPVSPGTALVGS(1)QK KQPPVS(-75.82)PGT(-56.5)ALVGS(56.5)QK 14 3 -0.13677 7531.7 0 0 11465 0 0 10761 0 0 12252 0 0 29262 0 0 10015 0 0 33601 0 0 18306 0 0 14680 0 0 11236 0 0 7139 0 0 10835 0 0 10884 0 0 12496 0 0 28646 0 0 10263 0 0 33476 0 0 18380 0 0 15287 0 0 11004 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 32248000 32248000 0 0 NaN 671 415 44 44 2182 2306 2482 2762 2482 2762 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14263 2482 2762 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14263 2482 2762 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14263 P17096 5 P17096 P17096 High mobility group protein HMG-I/HMG-Y HMGA1 sp|P17096|HMGA1_HUMAN High mobility group protein HMG-I/HMG-Y OS=Homo sapiens GN=HMGA1 PE=1 SV=3 0.444683 0 7.08044E-07 67.115 28.311 67.115 S ___________MSESSSKSSQPLASKQEKDG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX S(0.02)ES(0.079)S(0.445)S(0.445)KS(0.01)S(0.002)QPLASK S(-13.55)ES(-7.51)S(0)S(0)KS(-16.27)S(-24.55)QPLAS(-56.07)K 4 2 -2.2527 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 672 415 5 5 3717 3952 4213 4680 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10723 4213 4680 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10723 4213 4680 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10723 P17096 6 P17096 P17096 High mobility group protein HMG-I/HMG-Y HMGA1 sp|P17096|HMGA1_HUMAN High mobility group protein HMG-I/HMG-Y OS=Homo sapiens GN=HMGA1 PE=1 SV=3 0.444683 0 7.08044E-07 67.115 28.311 67.115 S __________MSESSSKSSQPLASKQEKDGT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.02)ES(0.079)S(0.445)S(0.445)KS(0.01)S(0.002)QPLASK S(-13.55)ES(-7.51)S(0)S(0)KS(-16.27)S(-24.55)QPLAS(-56.07)K 5 2 -2.2527 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 673 415 6 6 3717 3952 4213 4680 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10723 4213 4680 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10723 4213 4680 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10723 P17096 8 P17096 P17096 High mobility group protein HMG-I/HMG-Y HMGA1 sp|P17096|HMGA1_HUMAN High mobility group protein HMG-I/HMG-Y OS=Homo sapiens GN=HMGA1 PE=1 SV=3 0.810159 6.3018 5.83362E-11 112.59 88.436 112.59 1 S ________MSESSSKSSQPLASKQEKDGTEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPXXXXXXXX S(0.81)S(0.19)QPLASK S(6.3)S(-6.3)QPLAS(-104.98)K 1 3 0.20134 32899 0 0 40005 0 0 32201 0 0 36276 0 0 117750 0 0 33311 0 0 129700 0 0 65471 0 0 36273 0 0 4180.5 0 0 31128 0 0 37770 0 0 33535 0 0 37427 0 0 114530 0 0 33933 0 0 128890 0 0 64552 0 0 39754 0 0 5451.7 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 486050000 486050000 0 0 NaN 674 415 8 8 3717;4407 3952;4695 4212;4999 4679;5546 4999 5546 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10229 4999 5546 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10229 4212 4679 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10391 P17480 389 P17480 P17480 Nucleolar transcription factor 1 UBTF sp|P17480|UBF1_HUMAN Nucleolar transcription factor 1 OS=Homo sapiens GN=UBTF PE=1 SV=1 0.968396 15.0318 0.000403693 129.74 59.343 129.74 1 S LGEEKMLNINKKQATSPASKKPAQEGGKGGS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX QAT(0.03)S(0.968)PAS(0.001)K QAT(-15.03)S(15.03)PAS(-29.06)K 4 2 0.11173 34028 0 0 19341 0 0 32625 0 0 19140 0 0 10706 0 0 30167 0 0 13010 0 0 21487 0 0 22675 0 0 3081.7 0 0 32194 0 0 18270 0 0 32668 0 0 19842 0 0 12200 0 0 29643 0 0 13397 0 0 21983 0 0 21963 0 0 3399.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 51699000 51699000 0 0 NaN 675 416 389 389 3003 3184 3407 3778 3407 3778 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6634 3407 3778 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6634 3407 3778 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6634 P17542 122 P17542 P17542 T-cell acute lymphocytic leukemia protein 1 TAL1 sp|P17542|TAL1_HUMAN T-cell acute lymphocytic leukemia protein 1 OS=Homo sapiens GN=TAL1 PE=1 SV=2 1 134.29 1.2017E-05 134.29 118.47 134.29 1 S SVTAELPGDGRMVQLSPPALAAPAAPGRALL X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPXXX MVQLS(1)PPALAAPAAPGR MVQLS(134.29)PPALAAPAAPGR 5 3 -0.01694 9649.9 0 0 10846 0 0 7816 0 0 12506 0 0 14988 0 0 9500.5 0 0 14343 0 0 11722 0 0 12307 0 0 24240 0 0 9124.4 0 0 10255 0 0 8062.3 0 0 12691 0 0 14776 0 0 9730.5 0 0 14576 0 0 12403 0 0 12230 0 0 23096 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 87489000 87489000 0 0 NaN 676 417 122 122 2761 2929;2930 3139;3140 3487;3488;3489 3140 3489 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20050 3140 3489 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20050 3140 3489 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20050 P17706 304 P17706 P17706 Tyrosine-protein phosphatase non-receptor type 2 PTPN2 sp|P17706|PTN2_HUMAN Tyrosine-protein phosphatase non-receptor type 2 OS=Homo sapiens GN=PTPN2 PE=1 SV=2 1 79.3478 1.77021E-07 165.9 121.29 165.9 1 S WKELSKEDLSPAFDHSPNKIMTEKYNGNRIG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX EDLSPAFDHS(1)PNK EDLS(-79.35)PAFDHS(79.35)PNK 10 3 -0.72074 25640 0 0 24342 0 0 24969 0 0 24311 0 0 15770 0 0 28330 0 0 15278 0 0 24587 0 0 27243 0 0 6864.9 0 0 24260 0 0 22995 0 0 25068 0 0 25028 0 0 16551 0 0 28183 0 0 15903 0 0 25014 0 0 26373 0 0 7033.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 44107000 44107000 0 0 NaN 677 419 304 304 905 958 1038 1146 1038 1146 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13641 1038 1146 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13641 1038 1146 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13641 P17812 575 P17812 P17812 CTP synthase 1 CTPS1 sp|P17812|PYRG1_HUMAN CTP synthase 1 OS=Homo sapiens GN=CTPS1 PE=1 SV=2 0.975072 15.9305 3.79653E-53 364.92 308.94 364.92 1 S RLSPRDTYSDRSGSSSPDSEITELKFPSINH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP SGSS(0.025)S(0.975)PDSEITELK S(-67.89)GS(-43.87)S(-15.93)S(15.93)PDS(-82.11)EIT(-159.64)ELK 5 2 0.44116 23402 0 0 30641 0 0 22785 0 0 29472 0 0 24879 0 0 22559 0 0 30550 0 0 34208 0 0 32682 0 0 52424 0 0 22142 0 0 28939 0 0 23015 0 0 30221 0 0 25206 0 0 23166 0 0 30883 0 0 35441 0 0 32157 0 0 50156 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 66493000 66493000 0 0 NaN 678 420 575 575 3817;3818 4068;4069 4341;4342 4823;4824 4341 4823 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16171 4341 4823 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16171 4341 4823 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16171 P17844 498 P17844 P17844 Probable ATP-dependent RNA helicase DDX5 DDX5 sp|P17844|DDX5_HUMAN Probable ATP-dependent RNA helicase DDX5 OS=Homo sapiens GN=DDX5 PE=1 SV=1 0.999977 46.4755 0.00815875 81.771 64.258 81.771 1 S SRGRGGMKDDRRDRYSAGKRGGFNTFRDREN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX DRYS(1)AGK DRY(-46.48)S(46.48)AGK 4 3 -0.70407 32976 0 0 33536 0 0 32880 0 0 29219 0 0 20608 0 0 34237 0 0 23801 0 0 32522 0 0 33781 0 0 2765.3 0 0 31203 0 0 31656 0 0 32969 0 0 30345 0 0 21692 0 0 34077 0 0 24347 0 0 32771 0 0 32908 0 0 3356.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25616000 25616000 0 0 NaN 679 421 498 498 799 847 903 995 903 995 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6891 903 995 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6891 903 995 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6891 P17844 480 P17844 P17844 Probable ATP-dependent RNA helicase DDX5 DDX5 sp|P17844|DDX5_HUMAN Probable ATP-dependent RNA helicase DDX5 OS=Homo sapiens GN=DDX5 PE=1 SV=1 1 129.876 3.5818E-05 129.88 108 129.88 1 S QAINPKLLQLVEDRGSGRSRGRGGMKDDRRD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX LLQLVEDRGS(1)GR LLQLVEDRGS(129.88)GR 10 3 -0.86506 3043 0 0 8004.1 0 0 3962.8 0 0 6505.3 0 0 4853 0 0 3521.4 0 0 5576.3 0 0 5449.5 0 0 8936.3 0 0 1867.6 0 0 2882.9 0 0 7552.7 0 0 3949.7 0 0 6723 0 0 4885.6 0 0 3690.5 0 0 5733.5 0 0 5447.8 0 0 8674.9 0 0 1884.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25727000 25727000 0 0 NaN 680 421 480 480 2453 2591 2785 3112 2785 3112 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19498 2785 3112 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19498 2785 3112 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19498 P17858 775 P17858 P17858 ATP-dependent 6-phosphofructokinase, liver type PFKL sp|P17858|PFKAL_HUMAN ATP-dependent 6-phosphofructokinase, liver type OS=Homo sapiens GN=PFKL PE=1 SV=6 0.981661 17.2858 0.000128764 131.79 100.97 66.758 1 S AYVSGELEHVTRRTLSMDKGF__________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX RT(0.018)LS(0.982)MDK RT(-17.29)LS(17.29)MDK 4 3 -0.40288 69754 0 0 63097 0 0 74130 0 0 60982 0 0 106510 0 0 70629 0 0 115630 0 0 87500 0 0 64653 0 0 12771 0 0 66022 0 0 59593 0 0 74807 0 0 62899 0 0 106250 0 0 70600 0 0 115870 0 0 87499 0 0 65956 0 0 14051 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 128710000 128710000 0 0 NaN 681 422 775 775 3519;3520;4790 3736;3737;5108 3982;3983;5442 4421;4422;6053 3982 4421 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10565 3983 4422 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15335 3983 4422 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15335 P17980 9 P17980 P17980 26S protease regulatory subunit 6A PSMC3 sp|P17980|PRS6A_HUMAN 26S protease regulatory subunit 6A OS=Homo sapiens GN=PSMC3 PE=1 SV=3 0.951918 12.9662 6.52635E-05 98.253 81.72 98.253 1 S _______MNLLPNIESPVTRQEKMATVWDEA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPXXXXXXXXXXX MNLLPNIES(0.952)PVT(0.048)R MNLLPNIES(12.97)PVT(-12.97)R 9 2 -1.096 4822.1 0 0 5013.8 0 0 4920.4 0 0 4867.4 0 0 4617.5 0 0 4417 0 0 5310 0 0 5045.9 0 0 4382 0 0 28824 0 0 4563.3 0 0 4735.5 0 0 4946.5 0 0 4999.4 0 0 4712.6 0 0 4509.6 0 0 5346.5 0 0 5905.6 0 0 4363.1 0 0 27258 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9604800 9604800 0 0 NaN 682 423 9 9 2717 2883 3092 3439 3092 3439 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24056 3092 3439 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24056 3092 3439 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24056 P18031 352 P18031 P18031 Tyrosine-protein phosphatase non-receptor type 1 PTPN1 sp|P18031|PTN1_HUMAN Tyrosine-protein phosphatase non-receptor type 1 OS=Homo sapiens GN=PTPN1 PE=1 SV=1 1 67.0156 6.96006E-08 154.34 129.41 154.34 1 S ETQEDKDCPIKEEKGSPLNAAPYGIESMSQD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP GS(1)PLNAAPYGIESMSQDTEVR GS(67.02)PLNAAPY(-67.02)GIES(-99.74)MS(-118.11)QDT(-132.64)EVR 2 3 -0.17486 6460.9 0 0 5769.9 0 0 7571.6 0 0 5767 0 0 4615.3 0 0 6842 0 0 4719.3 0 0 6081 0 0 6524.8 0 0 16443 0 0 6117.8 0 0 5450.6 0 0 7524.3 0 0 5938.8 0 0 4861.4 0 0 6831.5 0 0 4848.3 0 0 6624.7 0 0 6361.5 0 0 15624 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13829000 13829000 0 0 NaN 683 425 352 352 1621 1708 1847 2059 1847 2059 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18956 1847 2059 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18956 1847 2059 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18956 P18031 365 P18031 P18031 Tyrosine-protein phosphatase non-receptor type 1 PTPN1 sp|P18031|PTN1_HUMAN Tyrosine-protein phosphatase non-receptor type 1 OS=Homo sapiens GN=PTPN1 PE=1 SV=1 0.589277 3.25152 0.00401492 90.899 68.011 90.899 1 S KGSPLNAAPYGIESMSQDTEVRSRVVGGSLR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X XPPPPPPPPPPPPPPPPPPPPPXXXXXXXXX GSPLNAAPYGIES(0.132)MS(0.589)QDT(0.279)EVR GS(-62.95)PLNAAPY(-37.35)GIES(-6.5)MS(3.25)QDT(-3.25)EVR 15 3 -1.9831 4728.4 0 0 5449.2 0 0 4924.2 0 0 4153.7 0 0 4121.3 0 0 3993.1 0 0 4799.9 0 0 5434.2 0 0 5381.1 0 0 11513 0 0 4475 0 0 5140.3 0 0 4938.6 0 0 4341.4 0 0 4239.9 0 0 4049.4 0 0 4869.2 0 0 5742 0 0 5284.9 0 0 10966 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17494000 17494000 0 0 NaN 684 425 365 365 1621 1708 1846 2058 1846 2058 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18509 1846 2058 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18509 1846 2058 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18509 P18031 378 P18031 P18031 Tyrosine-protein phosphatase non-receptor type 1 PTPN1 sp|P18031|PTN1_HUMAN Tyrosine-protein phosphatase non-receptor type 1 OS=Homo sapiens GN=PTPN1 PE=1 SV=1 1 89.542 0.00925987 89.542 24.068 89.542 1 S SMSQDTEVRSRVVGGSLRGAQAASPAKGEPS X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX VVGGS(1)LR VVGGS(89.54)LR 5 2 0.43097 16603 0 0 38627 0 0 15489 0 0 39816 0 0 19809 0 0 15271 0 0 18695 0 0 25151 0 0 40274 0 0 3210.4 0 0 15706 0 0 36496 0 0 15711 0 0 40415 0 0 19852 0 0 16533 0 0 19674 0 0 24942 0 0 38823 0 0 3605 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 328440000 328440000 0 0 NaN 685 425 378 378 5304 5651 6026 6698 6026 6698 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11172 6026 6698 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11172 6026 6698 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11172 P18433 189 P18433 P18433 Receptor-type tyrosine-protein phosphatase alpha PTPRA sp|P18433|PTPRA_HUMAN Receptor-type tyrosine-protein phosphatase alpha OS=Homo sapiens GN=PTPRA PE=1 SV=2 0.969473 17.1337 0.0493785 56.139 36.378 56.139 1 S AGSHSNSKQAGSHSNSFRLSNGRTEDVEPQS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX QAGS(0.012)HS(0.019)NS(0.969)FR QAGS(-19.16)HS(-17.13)NS(17.13)FR 8 2 0.090805 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 686 427 189 189 2995 3174 3397 3767 3397 3767 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5526 3397 3767 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5526 3397 3767 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5526 P18583 94 P18583 P18583 Protein SON SON sp|P18583|SON_HUMAN Protein SON OS=Homo sapiens GN=SON PE=1 SV=4 0.995977 23.9546 0.000277495 101.05 79.854 101.05 1 S YKPDLKEGSRKSRCVSVQTDPTDEIPTKKSK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX CVS(0.996)VQT(0.004)DPTDEIPTKK CVS(23.95)VQT(-23.95)DPT(-47.78)DEIPT(-69.78)KK 3 3 1.7539 16773 0 0 10144 0 0 16129 0 0 10832 0 0 12520 0 0 15920 0 0 10863 0 0 12603 0 0 10897 0 0 15525 0 0 15869 0 0 9586.2 0 0 16231 0 0 11161 0 0 12895 0 0 15718 0 0 11139 0 0 13238 0 0 10750 0 0 14911 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16159000 16159000 0 0 NaN 687 428 94 94 629 670 714 793 714 793 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14981 714 793 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14981 714 793 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14981 P18583 1697 P18583 P18583 Protein SON SON sp|P18583|SON_HUMAN Protein SON OS=Homo sapiens GN=SON PE=1 SV=4 1 87.2367 5.23926E-05 127.32 74.868 127.32 1 S PLPVKESDQTLAALLSPKESSGGEKEVPPPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX ESDQTLAALLS(1)PK ES(-93.62)DQT(-87.24)LAALLS(87.24)PK 11 3 -0.37026 16025 0 0 20403 0 0 17490 0 0 21592 0 0 14463 0 0 19750 0 0 16949 0 0 19679 0 0 24115 0 0 41535 0 0 15169 0 0 19281 0 0 17495 0 0 22068 0 0 14897 0 0 19956 0 0 17329 0 0 20994 0 0 23490 0 0 39566 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 296480000 296480000 0 0 NaN 688 428 1697 1697 824;1145 872;1205 928;1297 1023;1427;1428 1297 1427 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21425 1297 1427 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21425 1297 1427 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21425 P18583 1556 P18583 P18583 Protein SON SON sp|P18583|SON_HUMAN Protein SON OS=Homo sapiens GN=SON PE=1 SV=4 0.912772 10.1971 6.09985E-08 147.22 129.17 147.22 1 S IAKEMEHNTVCAAGTSPVGEIGEEKILPTSE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPPXXXXXX EMEHNTVCAAGT(0.087)S(0.913)PVGEIGEEK EMEHNT(-80.86)VCAAGT(-10.2)S(10.2)PVGEIGEEK 13 3 -0.45959 4818 0 0 6797.8 0 0 5416.5 0 0 5352.7 0 0 4151.2 0 0 6584.6 0 0 10850 0 0 11147 0 0 6553.1 0 0 27153 0 0 4561.3 0 0 6413.4 0 0 5416.9 0 0 5604 0 0 4378 0 0 6653.5 0 0 10605 0 0 11823 0 0 6648.2 0 0 25826 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14931000 14931000 0 0 NaN 689 428 1556 1556 1062 1119 1207 1327 1207 1327 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14037 1207 1327 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14037 1207 1327 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14037 P18583 2029 P18583 P18583 Protein SON SON sp|P18583|SON_HUMAN Protein SON OS=Homo sapiens GN=SON PE=1 SV=4 1 45.0775 0.0445935 45.077 18.405 45.077 2 S PVRLRRSRTPLRRRFSRSPIRRKRSRSSERG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX RFS(1)RS(1)PIR RFS(45.08)RS(45.08)PIR 3 3 0.54577 0 11590 0 0 13835 0 0 12252 0 0 14831 0 0 12326 0 0 11304 0 0 13952 0 0 12661 0 0 14587 0 0 2169.2 0 0 10970 0 0 13075 0 0 12303 0 0 15110 0 0 12528 0 0 11510 0 0 14141 0 0 12713 0 0 14366 0 0 2335.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 67944000 0 67944000 0 NaN 690 428 2029 2029 3235 3431 3666 4067 3666 4067 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7864 3666 4067 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7864 3666 4067 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7864 P18583 2031 P18583 P18583 Protein SON SON sp|P18583|SON_HUMAN Protein SON OS=Homo sapiens GN=SON PE=1 SV=4 1 45.0775 0.0445935 45.077 18.405 45.077 2 S RLRRSRTPLRRRFSRSPIRRKRSRSSERGRS X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX RFS(1)RS(1)PIR RFS(45.08)RS(45.08)PIR 5 3 0.54577 0 11590 0 0 13835 0 0 12252 0 0 14831 0 0 12326 0 0 11304 0 0 13952 0 0 12661 0 0 14587 0 0 2169.2 0 0 10970 0 0 13075 0 0 12303 0 0 15110 0 0 12528 0 0 11510 0 0 14141 0 0 12713 0 0 14366 0 0 2335.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 67944000 0 67944000 0 NaN 691 428 2031 2031 3235 3431 3666 4067 3666 4067 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7864 3666 4067 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7864 3666 4067 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7864 P18583 1769 P18583 P18583 Protein SON SON sp|P18583|SON_HUMAN Protein SON OS=Homo sapiens GN=SON PE=1 SV=4 0.778985 5.47144 1.26812E-15 214.58 173.36 214.58 1 S GPLLASDVGRDRSAASPVVSSMPERASESSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX S(0.221)AAS(0.779)PVVSSMPER S(-5.47)AAS(5.47)PVVS(-46.58)S(-59.01)MPER 4 2 -0.0071741 30086 0 0 24627 0 0 31631 0 0 27650 0 0 24467 0 0 29841 0 0 27523 0 0 26840 0 0 26131 0 0 11254 0 0 28475 0 0 23282 0 0 31680 0 0 28241 0 0 25295 0 0 29797 0 0 27832 0 0 27378 0 0 25843 0 0 11218 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 32531000 32531000 0 0 NaN 692 428 1769 1769 3574 3797 4050 4505 4050 4505 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11722 4050 4505 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11722 4050 4505 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11722 P18583 2009 P18583 P18583 Protein SON SON sp|P18583|SON_HUMAN Protein SON OS=Homo sapiens GN=SON PE=1 SV=4 0.990715 20.352 0.0173883 72.607 60.56 72.607 1 S TPSRRRRSRSVVRRRSFSISPVRLRRSRTPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX S(0.991)FS(0.009)ISPVR S(20.35)FS(-20.35)IS(-38.22)PVR 1 2 0.49959 13066 0 0 14151 0 0 13593 0 0 14878 0 0 14085 0 0 13178 0 0 14068 0 0 14482 0 0 16291 0 0 10056 0 0 12365 0 0 13372 0 0 13663 0 0 15205 0 0 14266 0 0 13320 0 0 14382 0 0 14779 0 0 15980 0 0 9803.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6435600 6435600 0 0 NaN 693 428 2009 2009 3758 3998 4262 4737 4262 4737 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16496 4262 4737 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16496 4262 4737 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16496 P18583 283 P18583 P18583 Protein SON SON sp|P18583|SON_HUMAN Protein SON OS=Homo sapiens GN=SON PE=1 SV=4 0.981945 17.3863 2.41722E-21 267.37 228.62 267.37 1 S VEYQMKSVLKSVESTSPEPSKIMLVEPPVAK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX SVEST(0.018)S(0.982)PEPSK S(-93.61)VES(-38.76)T(-17.39)S(17.39)PEPS(-74.22)K 6 2 -0.17843 22244 0 0 27914 0 0 19054 0 0 25344 0 0 27475 0 0 20347 0 0 31265 0 0 28048 0 0 28401 0 0 5268.9 0 0 21037 0 0 26355 0 0 19480 0 0 26099 0 0 27436 0 0 20724 0 0 31565 0 0 27995 0 0 28144 0 0 5610.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22719000 22719000 0 0 NaN 694 428 283 283 4553 4857 5174 5746 5174 5746 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8842 5174 5746 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8842 5174 5746 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8842 P18615 251 P18615 P18615 Negative elongation factor E NELFE sp|P18615|NELFE_HUMAN Negative elongation factor E OS=Homo sapiens GN=NELFE PE=1 SV=3 0.970146 15.1184 0.0205872 70.1 51.006 70.1 1 S RDRDRDREGPFRRSDSFPERRAPRKGNTLYV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX S(0.03)DS(0.97)FPER S(-15.12)DS(15.12)FPER 3 2 0.26736 48537 0 0 43569 0 0 45867 0 0 43262 0 0 50207 0 0 50121 0 0 50266 0 0 48940 0 0 46113 0 0 21307 0 0 45919 0 0 41156 0 0 46392 0 0 44549 0 0 50691 0 0 49958 0 0 51050 0 0 49779 0 0 45676 0 0 21196 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 26594000 26594000 0 0 NaN 695 429 251 251 3673;3674 3908;3909 4168;4169 4634;4635 4168 4634 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9181 4168 4634 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9181 4168 4634 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9181 P18615 115 P18615 P18615 Negative elongation factor E NELFE sp|P18615|NELFE_HUMAN Negative elongation factor E OS=Homo sapiens GN=NELFE PE=1 SV=3 0.917029 10.4346 0.000127325 122.1 106.45 122.1 1 S EKGPVPTFQPFQRSISADDDLQESSRRPQRK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX S(0.083)IS(0.917)ADDDLQESSR S(-10.43)IS(10.43)ADDDLQES(-75.64)S(-88.17)R 3 2 1.857 87132 0 0 91785 0 0 93560 0 0 95751 0 0 85397 0 0 89756 0 0 86995 0 0 95282 0 0 102730 0 0 48974 0 0 82473 0 0 86729 0 0 93743 0 0 97976 0 0 87180 0 0 90396 0 0 88907 0 0 96837 0 0 100690 0 0 48320 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 112040000 112040000 0 0 NaN 696 429 115 115 3861 4114 4390 4881;4882;4883;4884 4390 4882 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11058 4390 4882 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11058 4390 4882 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11058 P18615 49 P18615 P18615 Negative elongation factor E NELFE sp|P18615|NELFE_HUMAN Negative elongation factor E OS=Homo sapiens GN=NELFE PE=1 SV=3 0.598092 1.72676 1.93929E-16 241.6 207.4 241.6 1 S KQSSSSTTSQGGVKRSLSEQPVMDTATATEQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.598)LS(0.402)EQPVMDTATATEQAK S(1.73)LS(-1.73)EQPVMDT(-42.65)AT(-107.9)AT(-164.6)EQAK 1 3 -0.36224 44306 0 0 53277 0 0 46567 0 0 55727 0 0 68671 0 0 44106 0 0 67189 0 0 62902 0 0 64836 0 0 25307 0 0 41933 0 0 50343 0 0 47028 0 0 56883 0 0 68359 0 0 45012 0 0 68399 0 0 63130 0 0 64074 0 0 25286 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 166990000 166990000 0 0 NaN 697 429 49 49 3980 4241;4242 4526;4527 5032;5033 4527 5033 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16104 4527 5033 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16104 4527 5033 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16104 P18615 131 P18615 P18615 Negative elongation factor E NELFE sp|P18615|NELFE_HUMAN Negative elongation factor E OS=Homo sapiens GN=NELFE PE=1 SV=3 0.690462 3.61114 0.000143732 117.63 95.584 117.63 1 S ADDDLQESSRRPQRKSLYESFVSSSDRLREL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(0.69)LY(0.009)ES(0.301)FVSSSDR S(3.61)LY(-18.89)ES(-3.61)FVS(-55.07)S(-68.19)S(-80.48)DR 1 2 -0.44618 7944.2 0 0 10770 0 0 9852.1 0 0 9685.3 0 0 9789.1 0 0 9228.1 0 0 10969 0 0 10977 0 0 10244 0 0 19015 0 0 7524.4 0 0 10168 0 0 9812.3 0 0 10003 0 0 9953.7 0 0 9328 0 0 11089 0 0 11516 0 0 10139 0 0 18159 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12206000 12206000 0 0 NaN 698 429 131 131 4023 4288 4576 5084 4576 5084 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18627 4576 5084 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18627 4576 5084 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18627 P18615 89 P18615 P18615 Negative elongation factor E NELFE sp|P18615|NELFE_HUMAN Negative elongation factor E OS=Homo sapiens GN=NELFE PE=1 SV=3 0.508136 0.141345 0.0220398 57.532 19.941 57.532 1 S ISAIKAETKNSGFKRSRTLEGKLKDPEKGPV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX S(0.508)RT(0.492)LEGK S(0.14)RT(-0.14)LEGK 1 3 -0.1128 69598 0 0 51743 0 0 69275 0 0 52034 0 0 58850 0 0 61207 0 0 64411 0 0 58304 0 0 54271 0 0 2121.7 0 0 65856 0 0 48882 0 0 69658 0 0 53557 0 0 60406 0 0 60909 0 0 65021 0 0 58659 0 0 53979 0 0 3347.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 63612000 63612000 0 0 NaN 699 429 89 89 4313 4598 4899 5442 4899 5442 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8018 4899 5442 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8018 4899 5442 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8018 P18615 353 P18615 P18615 Negative elongation factor E NELFE sp|P18615|NELFE_HUMAN Negative elongation factor E OS=Homo sapiens GN=NELFE PE=1 SV=3 1 108.709 4.18009E-05 129.65 107.26 129.65 1 S AATGKSVWGSLAVQNSPKGCHRDKRTQIVYS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPXXXXXXXXXXXXX SVWGSLAVQNS(1)PK S(-108.98)VWGS(-108.71)LAVQNS(108.71)PK 11 3 0.57972 9409.4 0 0 8787.1 0 0 9825.4 0 0 7985.5 0 0 4996.3 0 0 9928.2 0 0 4925.4 0 0 8801.8 0 0 7879.1 0 0 5769.8 0 0 8905.3 0 0 8296.3 0 0 9810.5 0 0 8279.4 0 0 5357.2 0 0 9861.6 0 0 5098 0 0 9046.4 0 0 7649 0 0 5636.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28212000 28212000 0 0 NaN 700 429 353 353 4585 4890 5210 5785 5210 5785 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19138 5210 5785 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19138 5210 5785 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19138 P18621 141 P18621 P18621 60S ribosomal protein L17 RPL17 sp|P18621|RL17_HUMAN 60S ribosomal protein L17 OS=Homo sapiens GN=RPL17 PE=1 SV=3 0.592318 1.62235 3.6645E-05 120.64 105.22 120.64 1 S RRRTYRAHGRINPYMSSPCHIEMILTEKEQI X;X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);Phospho (STY);X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPXXX INPYMS(0.592)S(0.408)PCHIEMILTEK INPY(-55.81)MS(1.62)S(-1.62)PCHIEMILT(-97.43)EK 6 3 0.84608 3775.6 0 0 5819.5 0 0 4800.2 0 0 5770.2 0 0 4457.5 0 0 4671.2 0 0 5951.5 0 0 6021.8 0 0 6584.7 0 0 24469 0 0 3576.5 0 0 5497.2 0 0 4773.2 0 0 5910 0 0 4565.4 0 0 4794.3 0 0 6003.7 0 0 6725.3 0 0 6470.2 0 0 23180 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8301800 8301800 0 0 NaN 701 430 141 141 1899 2005;2006 2164 2424 2164 2424 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21517 2164 2424 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21517 2164 2424 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21517 P18621 142 P18621 P18621 60S ribosomal protein L17 RPL17 sp|P18621|RL17_HUMAN 60S ribosomal protein L17 OS=Homo sapiens GN=RPL17 PE=1 SV=3 0.785322 5.63261 7.23594E-08 165.88 137.55 147 1 S RRTYRAHGRINPYMSSPCHIEMILTEKEQIV X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;Phospho (STY);X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPXXXX INPYMS(0.215)S(0.785)PCHIEMILTEK INPY(-61.07)MS(-5.63)S(5.63)PCHIEMILT(-107.14)EK 7 3 0.72465 18724 0 0 29674 0 0 19673 0 0 24638 0 0 20656 0 0 24353 0 0 32082 0 0 30212 0 0 32178 0 0 77542 0 0 17721 0 0 28003 0 0 19788 0 0 25600 0 0 21065 0 0 24642 0 0 32110 0 0 32414 0 0 31746 0 0 73715 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 59785000 59785000 0 0 NaN 702 430 142 142 1899 2005;2006 2165;2166 2425;2426 2166 2426 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23151 2165 2425 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22130 2165 2425 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22130 P18754 11 P18754 P18754 Regulator of chromosome condensation RCC1 sp|P18754|RCC1_HUMAN Regulator of chromosome condensation OS=Homo sapiens GN=RCC1 PE=1 SV=1 1 61.4352 0.0112922 75.877 35.162 61.435 1 S _____MSPKRIAKRRSPPADAIPKSKKVKVS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX S(1)PPADAIPK S(61.44)PPADAIPK 1 3 -0.35651 58133 0 0 87490 0 0 57265 0 0 85162 0 0 98903 0 0 58495 0 0 101210 0 0 80746 0 0 89288 0 0 7251.3 0 0 55006 0 0 82636 0 0 58227 0 0 87155 0 0 97930 0 0 60115 0 0 102580 0 0 80350 0 0 88606 0 0 8696.7 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 421950000 421950000 0 0 NaN 703 432 11 11 3446;4134 3660;4407 3902;3903;4698 4331;4332;5214 4698 5214 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13329 3902 4331 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8704 3903 4332 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8909 P18848 248 P18848 P18848 Cyclic AMP-dependent transcription factor ATF-4 ATF4 sp|P18848|ATF4_HUMAN Cyclic AMP-dependent transcription factor ATF-4 OS=Homo sapiens GN=ATF4 PE=1 SV=3 0.936537 11.6901 5.7899E-07 156.2 117.39 156.2 1 S QHSPSTRGSPNRSLPSPGVLCGSARPKPYDP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX S(0.063)LPS(0.937)PGVLCGSAR S(-11.69)LPS(11.69)PGVLCGS(-72.32)AR 4 2 0.32534 14895 0 0 11249 0 0 15001 0 0 11929 0 0 9529.7 0 0 16562 0 0 7202.4 0 0 12326 0 0 12773 0 0 13233 0 0 14095 0 0 10630 0 0 15027 0 0 12281 0 0 9966.2 0 0 16366 0 0 7595.7 0 0 12927 0 0 12367 0 0 12746 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12816000 12816000 0 0 NaN 704 433 248 248 3965 4224 4507 5009 4507 5009 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16921 4507 5009 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16921 4507 5009 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16921 P18858 51 P18858 P18858 DNA ligase 1 LIG1 sp|P18858|DNLI1_HUMAN DNA ligase 1 OS=Homo sapiens GN=LIG1 PE=1 SV=1 0.999886 39.4407 5.40505E-09 175.8 152.88 175.8 1 S KAALKEWNGVVSESDSPVKRPGRKAARVLGS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPXXXXXXXXXXXX EWNGVVSESDS(1)PVK EWNGVVS(-89.8)ES(-39.44)DS(39.44)PVK 11 3 -0.68253 10796 0 0 10979 0 0 12911 0 0 9967.2 0 0 7838.8 0 0 12099 0 0 10327 0 0 12142 0 0 11071 0 0 22307 0 0 10224 0 0 10365 0 0 12822 0 0 10330 0 0 8290.2 0 0 12075 0 0 10413 0 0 12850 0 0 10892 0 0 21286 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22752000 22752000 0 0 NaN 705 434 51 51 1228 1292 1392 1543 1392 1543 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16352 1392 1543 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16352 1392 1543 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16352 P18858 141 P18858 P18858 DNA ligase 1 LIG1 sp|P18858|DNLI1_HUMAN DNA ligase 1 OS=Homo sapiens GN=LIG1 PE=1 SV=1 1 136.094 7.10736E-11 183.15 166.59 183.15 1 S KQLPKRTIQEVLEEQSEDEDREAKRKKEEEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPXXXXXXX TIQEVLEEQS(1)EDEDREAK T(-136.09)IQEVLEEQS(136.09)EDEDREAK 10 3 -0.17444 14380 0 0 14013 0 0 13371 0 0 16200 0 0 16410 0 0 13539 0 0 17803 0 0 17234 0 0 19587 0 0 34433 0 0 13603 0 0 13251 0 0 13562 0 0 16457 0 0 16495 0 0 13801 0 0 18104 0 0 18181 0 0 19251 0 0 32821 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29609000 29609000 0 0 NaN 706 434 141 141 4749 5065 5398 6002 5398 6002 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16958 5398 6002 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16958 5398 6002 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16958 P18887 241 P18887 P18887 DNA repair protein XRCC1 XRCC1 sp|P18887|XRCC1_HUMAN DNA repair protein XRCC1 OS=Homo sapiens GN=XRCC1 PE=1 SV=2 0.942981 16.9561 0.00718562 80.638 50.95 80.638 1 S SPVSRAIGSTSKPQESPKGKRKLDLNQEEKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPXXXXXXXXXXXXX AIGS(0.019)T(0.019)S(0.019)KPQES(0.943)PK AIGS(-16.96)T(-16.96)S(-16.96)KPQES(16.96)PK 11 3 1.5786 48297 0 0 49192 0 0 52500 0 0 44656 0 0 49967 0 0 58163 0 0 49923 0 0 53738 0 0 57017 0 0 6989.8 0 0 45717 0 0 46444 0 0 52592 0 0 46345 0 0 50862 0 0 57654 0 0 51014 0 0 54285 0 0 55957 0 0 7825.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 73734000 73734000 0 0 NaN 707 435 241 241 251 268 286 317 286 317 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10168 286 317 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10168 286 317 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10168 P18887 199 P18887 P18887 DNA repair protein XRCC1 XRCC1 sp|P18887|XRCC1_HUMAN DNA repair protein XRCC1 OS=Homo sapiens GN=XRCC1 PE=1 SV=2 0.479977 0 3.15104E-18 217.41 190.91 217.41 S SLRPGALFFSRINKTSPVTASDPAGPSYAAA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX INKT(0.48)S(0.48)PVT(0.038)AS(0.002)DPAGPSYAAATLQASSAASSASPVSR INKT(0)S(0)PVT(-11.02)AS(-23.57)DPAGPS(-91.99)Y(-107)AAAT(-141.87)LQAS(-192.73)S(-197.51)AAS(-205)S(-207.9)AS(-212.31)PVS(-215.37)R 5 4 0.20267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 708 435 199 199 1896 2002 2161 2421 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17638 2161 2421 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17638 2161 2421 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17638 P18887 447 P18887 P18887 DNA repair protein XRCC1 XRCC1 sp|P18887|XRCC1_HUMAN DNA repair protein XRCC1 OS=Homo sapiens GN=XRCC1 PE=1 SV=2 0.836178 7.1095 4.97964E-08 151.37 134.7 151.37 2 S QPQTKTKPTQAAGPSSPQKPPTPEETKAASP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPPPXXXX TKPT(0.001)QAAGPS(0.163)S(0.836)PQKPPT(1)PEETK T(-44.33)KPT(-28.8)QAAGPS(-7.11)S(7.11)PQKPPT(36.61)PEET(-36.61)K 11 4 -0.14729 0 14287 0 0 13080 0 0 15132 0 0 13925 0 0 20067 0 0 16716 0 0 20356 0 0 20459 0 0 17077 0 0 82346 0 0 13522 0 0 12361 0 0 15249 0 0 14291 0 0 20073 0 0 16833 0 0 20617 0 0 22858 0 0 16989 0 0 78012 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 32696000 0 32696000 0 NaN 709 435 447 447 4761 5078 5411 6016 5411 6016 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10841 5411 6016 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10841 5411 6016 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10841 P19174 1248 P19174 P19174 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 PLCG1 sp|P19174|PLCG1_HUMAN 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Homo sapiens GN=PLCG1 PE=1 SV=1 0.999964 44.4881 0.000385641 115.65 75.774 115.65 1 S SDASGQLFHGRAREGSFESRYQQPFEDFRIS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX AREGS(1)FESR AREGS(44.49)FES(-44.49)R 5 2 -0.91363 12035 0 0 18448 0 0 11207 0 0 16816 0 0 12085 0 0 9762.5 0 0 11929 0 0 14172 0 0 16485 0 0 3796.1 0 0 11385 0 0 17418 0 0 11343 0 0 17252 0 0 12214 0 0 10163 0 0 12275 0 0 14159 0 0 16072 0 0 3902.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20026000 20026000 0 0 NaN 710 436 1248 1248 414 443 478 532 478 532 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6172 478 532 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6172 478 532 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6172 P19338 67 P19338 P19338 Nucleolin NCL sp|P19338|NUCL_HUMAN Nucleolin OS=Homo sapiens GN=NCL PE=1 SV=3 0.992784 21.3857 0.00156144 114.5 74.954 114.5 1 S KGKKAAATSAKKVVVSPTKKVAVATPAKKAA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX VVVS(0.993)PT(0.007)K VVVS(21.39)PT(-21.39)K 4 2 -0.47813 270750 0 0 147760 0 0 267640 0 0 151810 0 0 160290 0 0 221330 0 0 177890 0 0 189480 0 0 144830 0 0 5956.4 0 0 256190 0 0 139600 0 0 268400 0 0 156740 0 0 169210 0 0 218360 0 0 179330 0 0 191480 0 0 144300 0 0 9994 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 8684800000 8684800000 0 0 NaN 711 437 67 67 2273;5316;5317 2402;5664;5665 2585;6040;6041 2888;6713;6714 6040 6713 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12501 6040 6713 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12501 6040 6713 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12501 P19338 563 P19338 P19338 Nucleolin NCL sp|P19338|NUCL_HUMAN Nucleolin OS=Homo sapiens GN=NCL PE=1 SV=3 1 120.388 8.30326E-05 120.39 97.478 120.39 1 S IEGRAIRLELQGPRGSPNARSQPSKTLFVKG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPXXXXXXXXXXX LELQGPRGS(1)PNAR LELQGPRGS(120.39)PNAR 9 3 -0.4961 29818 0 0 26720 0 0 27384 0 0 26758 0 0 37452 0 0 29359 0 0 36448 0 0 33250 0 0 27829 0 0 4631.1 0 0 28206 0 0 25241 0 0 27835 0 0 27514 0 0 37390 0 0 29369 0 0 36914 0 0 33341 0 0 27824 0 0 5130.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1420100000 1420100000 0 0 NaN 712 437 563 563 2331 2464 2653 2965 2653 2965 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11567 2653 2965 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11567 2653 2965 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11567 P19484 467 P19484 P19484 Transcription factor EB TFEB sp|P19484|TFEB_HUMAN Transcription factor EB OS=Homo sapiens GN=TFEB PE=1 SV=3 0.713604 4.48331 1.14949E-10 184.65 171.56 184.65 1 S STMSPEASKASSRRSSFSMEEGDVL______ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX RS(0.254)S(0.714)FS(0.032)MEEGDVL RS(-4.48)S(4.48)FS(-13.45)MEEGDVL 3 2 -0.46042 16789 0 0 12280 0 0 16843 0 0 13016 0 0 14186 0 0 17267 0 0 14420 0 0 15596 0 0 14839 0 0 36109 0 0 15887 0 0 11605 0 0 16925 0 0 13387 0 0 14556 0 0 17165 0 0 14679 0 0 16796 0 0 14624 0 0 34361 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28639000 28639000 0 0 NaN 713 438 467 467 3494 3711 3957 4395 3957 4395 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18073 3957 4395 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18073 3957 4395 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18073 P19484 332 P19484 P19484 Transcription factor EB TFEB sp|P19484|TFEB_HUMAN Transcription factor EB OS=Homo sapiens GN=TFEB PE=1 SV=3 0.655954 3.45807 2.96014E-24 256.75 225.79 256.75 1 S QELEMQARVHGLPTTSPSGMNMAELAQQVVK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPPP VHGLPT(0.026)T(0.296)S(0.656)PS(0.022)GMNMAELAQQVVK VHGLPT(-14.02)T(-3.46)S(3.46)PS(-14.7)GMNMAELAQQVVK 8 3 1.6349 8839.5 0 0 2291 0 0 9541 0 0 2392.6 0 0 2358.4 0 0 8928 0 0 2405.7 0 0 4731.9 0 0 3244.7 0 0 18581 0 0 8367.1 0 0 2164.8 0 0 9479.1 0 0 2555.5 0 0 2818.8 0 0 8639.7 0 0 2469.5 0 0 5469 0 0 3165.9 0 0 17605 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12031000 12031000 0 0 NaN 714 438 332 332 5129 5466 5822 6473 5822 6473 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22747 5822 6473 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22747 5822 6473 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22747 P19525 542 P19525 P19525 Interferon-induced, double-stranded RNA-activated protein kinase EIF2AK2 sp|P19525|E2AK2_HUMAN Interferon-induced, double-stranded RNA-activated protein kinase OS=Homo sapiens GN=EIF2AK2 PE=1 SV=2 1 55.0402 0.0392234 55.04 32.842 55.04 1 S PNTSEILRTLTVWKKSPEKNERHTC______ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPXXXXXXXXX KS(1)PEKNER KS(55.04)PEKNER 2 3 0.85061 11344 0 0 14662 0 0 10310 0 0 14043 0 0 18502 0 0 12162 0 0 19079 0 0 14152 0 0 17523 0 0 2511.3 0 0 10731 0 0 13847 0 0 10542 0 0 14426 0 0 18299 0 0 12304 0 0 19350 0 0 14194 0 0 17356 0 0 2692.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24409000 24409000 0 0 NaN 715 439 542 542 2219 2345 2526 2821 2526 2821 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5963 2526 2821 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5963 2526 2821 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5963 P19532 556 P19532 P19532 Transcription factor E3 TFE3 sp|P19532|TFE3_HUMAN Transcription factor E3 OS=Homo sapiens GN=TFE3 PE=1 SV=4 0.999788 36.7562 1.2521E-10 183.56 155.26 183.56 1 S LSPLRAASDPLLSSVSPAVSKASSRRSSFSM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXPPPPPPPPPPPPPPPPXXXXXXXXXX AASDPLLSSVS(1)PAVSK AAS(-120.1)DPLLS(-58.72)S(-36.76)VS(36.76)PAVS(-78.67)K 11 3 1.443 7395.7 0 0 10864 0 0 7366.6 0 0 11624 0 0 5890.9 0 0 7624.1 0 0 6709.9 0 0 6348.6 0 0 12867 0 0 7647.6 0 0 6998.1 0 0 10267 0 0 7402.9 0 0 11824 0 0 6082.7 0 0 7818.9 0 0 6959.4 0 0 6648 0 0 12435 0 0 7348.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16595000 16595000 0 0 NaN 716 440 556 556 65 69 75 87 75 87 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18355 75 87 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18355 75 87 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18355 P19532 567 P19532 P19532 Transcription factor E3 TFE3 sp|P19532|TFE3_HUMAN Transcription factor E3 OS=Homo sapiens GN=TFE3 PE=1 SV=4 0.801721 6.12835 2.17212E-06 158.05 141.83 158.05 1 S LSSVSPAVSKASSRRSSFSMEEES_______ X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPXXXXXXX RS(0.802)S(0.196)FS(0.003)MEEES RS(6.13)S(-6.13)FS(-24.63)MEEES(-111.25) 2 2 -0.72715 20284 0 0 19834 0 0 21394 0 0 22153 0 0 22631 0 0 20949 0 0 24477 0 0 23255 0 0 22767 0 0 8732.1 0 0 19198 0 0 18750 0 0 21497 0 0 22585 0 0 22917 0 0 21098 0 0 24780 0 0 23500 0 0 22537 0 0 8760.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30634000 30634000 0 0 NaN 717 440 567 567 3493 3710 3956 4394 3956 4394 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11014 3956 4394 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11014 3956 4394 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11014 P19634 599 P19634 P19634 Sodium/hydrogen exchanger 1 SLC9A1 sp|P19634|SL9A1_HUMAN Sodium/hydrogen exchanger 1 OS=Homo sapiens GN=SLC9A1 PE=1 SV=2 0.999666 35.9474 4.33412E-07 149.44 133.09 149.44 1 S QAIELVESGGMGKIPSAVSTVSMQNIHPKSL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX IPS(1)AVSTVSMQNIHPK IPS(35.95)AVS(-35.95)T(-40.99)VS(-71.35)MQNIHPK 3 3 -0.25415 6281.5 0 0 5654.5 0 0 6433.3 0 0 6141.5 0 0 7587.5 0 0 5036.9 0 0 9590 0 0 8295.7 0 0 6534.8 0 0 14598 0 0 5944.5 0 0 5344.4 0 0 6487.1 0 0 6258.4 0 0 7657.1 0 0 5166.4 0 0 9582 0 0 8634.8 0 0 6577.5 0 0 13938 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9979200 9979200 0 0 NaN 718 441 599 599 1914 2022 2183 2443 2183 2443 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18680 2183 2443 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18680 2183 2443 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18680 P19793 21 P19793 P19793 Retinoic acid receptor RXR-alpha RXRA sp|P19793|RXRA_HUMAN Retinoic acid receptor RXR-alpha OS=Homo sapiens GN=RXRA PE=1 SV=1 0.895112 11.1664 2.04551E-11 187.16 166.51 187.16 1 S FLPLDFSTQVNSSLTSPTGRGSMAAPSLHPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX HFLPLDFSTQVNSSLT(0.068)S(0.895)PT(0.036)GR HFLPLDFS(-135.76)T(-117.28)QVNS(-52.82)S(-47.71)LT(-11.17)S(11.17)PT(-13.9)GR 17 3 0.43993 2968 0 0 3268.2 0 0 3719.6 0 0 3240.7 0 0 4163.6 0 0 3332.3 0 0 4220.5 0 0 4451.7 0 0 3235.6 0 0 15759 0 0 2811.3 0 0 3087.2 0 0 3707.7 0 0 3330.6 0 0 4198.9 0 0 3379.8 0 0 4266.4 0 0 4896.9 0 0 3234.3 0 0 14942 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10628000 10628000 0 0 NaN 719 442 21 21 1709 1802 1946 2170 1946 2170 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22403 1946 2170 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22403 1946 2170 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22403 P20042 2 P20042 P20042 Eukaryotic translation initiation factor 2 subunit 2 EIF2S2 sp|P20042|IF2B_HUMAN Eukaryotic translation initiation factor 2 subunit 2 OS=Homo sapiens GN=EIF2S2 PE=1 SV=2 1 86.5097 4.41918E-11 124.1 108.56 124.1 1 S ______________MSGDEMIFDPTMSKKKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Oxidation (M);X;X;X;X;X;Oxidation (M);X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPXX S(1)GDEMIFDPTMSKK S(86.51)GDEMIFDPT(-86.51)MS(-100.26)KK 1 2 -1.4149 127160 0 0 197970 0 0 128260 0 0 192200 0 0 175960 0 0 129360 0 0 179150 0 0 185540 0 0 208000 0 0 359150 0 0 120330 0 0 186980 0 0 129670 0 0 196690 0 0 175820 0 0 133850 0 0 182990 0 0 194750 0 0 204010 0 0 342470 0 0 11 0 0 11 0 0 11 0 0 11 0 0 11 0 0 11 0 0 11 0 0 11 0 0 11 0 0 11 0 0 1358800000 1358800000 0 0 NaN 720 443 2 2 3776;3777 4017;4018;4019;4020;4021 4282;4283;4284;4285;4286;4287;4288 4757;4758;4759;4760;4761;4762;4763;4764;4765;4766;4767 4288 4767 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20570 4288 4767 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20570 4288 4767 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20570 P20338 2 P20338 P20338 Ras-related protein Rab-4A RAB4A sp|P20338|RAB4A_HUMAN Ras-related protein Rab-4A OS=Homo sapiens GN=RAB4A PE=1 SV=3 0.991384 20.6216 1.22647E-41 156.48 144.21 156.48 1 S ______________MSQTAMSETYDFLFKFL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPXX S(0.991)QT(0.009)AMSETYDFLFK S(20.62)QT(-20.62)AMS(-46.1)ET(-66.07)Y(-121.59)DFLFK 1 2 -0.20193 7057.8 0 0 7807.7 0 0 7715.3 0 0 6353.3 0 0 22712 0 0 7073.8 0 0 28646 0 0 13656 0 0 6755.9 0 0 24981 0 0 6680.9 0 0 7367.3 0 0 7925.9 0 0 6623.7 0 0 22226 0 0 7187.8 0 0 28275 0 0 14195 0 0 7594.5 0 0 23838 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37709000 37709000 0 0 NaN 721 445 2 2 4255 4534 4833 5364 4833 5364 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24459 4833 5364 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24459 4833 5364 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24459 P20340 2 P20340 P20340 Ras-related protein Rab-6A RAB6A sp|P20340|RAB6A_HUMAN Ras-related protein Rab-6A OS=Homo sapiens GN=RAB6A PE=1 SV=3 0.89092 9.12091 2.56594E-07 107.15 92.003 107.15 1 S ______________MSTGGDFGNPLRKFKLV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(0.891)T(0.109)GGDFGNPLRK S(9.12)T(-9.12)GGDFGNPLRK 1 2 0.86946 37672 0 0 23504 0 0 38655 0 0 26307 0 0 32535 0 0 42432 0 0 31584 0 0 31124 0 0 27979 0 0 19798 0 0 35651 0 0 22219 0 0 38790 0 0 27099 0 0 33361 0 0 41708 0 0 32097 0 0 32255 0 0 27760 0 0 19363 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 39845000 39845000 0 0 NaN 722 446 2 2 4506 4799 5111 5676 5111 5676 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15421 5111 5676 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15421 5111 5676 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15421 P20700 23 P20700 P20700 Lamin-B1 LMNB1 sp|P20700|LMNB1_HUMAN Lamin-B1 OS=Homo sapiens GN=LMNB1 PE=1 SV=2 0.973412 15.6442 2.35281E-07 162.96 129.23 162.96 1;2 S PPRMGSRAGGPTTPLSPTRLSRLQEKEELRE X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPXXXXXXXXXXXX AGGPTTPLS(0.973)PT(0.027)R AGGPT(-57.55)T(-43.09)PLS(15.64)PT(-15.64)R 9 2 0.16569 33500 30597 0 36894 31150 0 32330 31771 0 35976 30026 0 34673 27469 0 34305 32272 0 35023 24533 0 35554 28495 0 38173 30601 0 6325.7 27156 0 31695 28957 0 34847 29420 0 32651 31866 0 36968 30934 0 35056 28094 0 34488 32251 0 35720 25280 0 35805 29547 0 37532 29937 0 6779.3 26230 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 274310000 234890000 39425000 0 NaN 723 448 23 23 204 213;214 230;231;232 258;259;260 230 258 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10349 230 258 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10349 230 258 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10349 P20700;Q03252 391;385 P20700;Q03252 P20700 Lamin-B1;Lamin-B2 LMNB1;LMNB2 sp|P20700|LMNB1_HUMAN Lamin-B1 OS=Homo sapiens GN=LMNB1 PE=1 SV=2;sp|Q03252|LMNB2_HUMAN Lamin-B2 OS=Homo sapiens GN=LMNB2 PE=1 SV=3 0.998483 28.8867 2.07823E-06 143.43 120.12 86.214 1;2 S AYRKLLEGEEERLKLSPSPSSRVTVSRASSS;AYRKLLEGEEERLKLSPSPSSRVTVSRATSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX LKLS(0.998)PS(0.025)PS(0.085)S(0.892)R LKLS(28.89)PS(-15.84)PS(-10.2)S(10.2)R 4 3 -0.11311 71038 63687 0 53648 60383 0 78102 62258 0 54455 61489 0 31694 46520 0 68887 63958 0 40128 48619 0 56531 61066 0 51417 68284 0 1176.6 44600 0 67247 60259 0 50684 57048 0 77686 62584 0 56095 63107 0 35033 48187 0 68252 64046 0 40751 49928 0 57219 62710 0 50254 66542 0 2416.2 43409 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 598780000 483170000 115600000 0 NaN 724 448;859 391;385 391 2418;2577 2555;2556;2721 2748;2749;2750 3069;3070;3071;3072 2749 3070 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13347 2748 3069 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12362 2748 3069 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12362 P20700;Q03252 393;387 P20700;Q03252 P20700 Lamin-B1;Lamin-B2 LMNB1;LMNB2 sp|P20700|LMNB1_HUMAN Lamin-B1 OS=Homo sapiens GN=LMNB1 PE=1 SV=2;sp|Q03252|LMNB2_HUMAN Lamin-B2 OS=Homo sapiens GN=LMNB2 PE=1 SV=3 0.961264 14.1603 0.000601709 124.95 75.399 124.95 1 S RKLLEGEEERLKLSPSPSSRVTVSRASSSRS;RKLLEGEEERLKLSPSPSSRVTVSRATSSSS X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX LS(0.037)PS(0.961)PS(0.002)SR LS(-14.16)PS(14.16)PS(-27.21)S(-45.53)R 4 2 1.4734 65813 0 0 61666 0 0 61590 0 0 61891 0 0 43048 0 0 68042 0 0 41268 0 0 63509 0 0 66864 0 0 748.42 0 0 62260 0 0 58255 0 0 62030 0 0 63633 0 0 44779 0 0 67872 0 0 42794 0 0 63902 0 0 64889 0 0 2174.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 109720000 109720000 0 0 NaN 725 448;859 393;387 393 2418;2577 2555;2556;2721 2919 3253 2919 3253 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8147 2919 3253 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8147 2919 3253 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8147 P20700;Q03252 396;390 P20700;Q03252 P20700 Lamin-B1;Lamin-B2 LMNB1;LMNB2 sp|P20700|LMNB1_HUMAN Lamin-B1 OS=Homo sapiens GN=LMNB1 PE=1 SV=2;sp|Q03252|LMNB2_HUMAN Lamin-B2 OS=Homo sapiens GN=LMNB2 PE=1 SV=3 0.891508 10.2046 0.00553527 86.214 70.324 86.214 2 S LEGEEERLKLSPSPSSRVTVSRASSSRSVRT;LEGEEERLKLSPSPSSRVTVSRATSSSSGSL X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXPPPPPPPPPPXXXXXXXXXXXXXX LKLS(0.998)PS(0.025)PS(0.085)S(0.892)R LKLS(28.89)PS(-15.84)PS(-10.2)S(10.2)R 9 3 -0.11311 0 45217 0 0 45007 0 0 43959 0 0 45362 0 0 31737 0 0 46218 0 0 33108 0 0 41956 0 0 49631 0 0 12391 0 0 42782 0 0 42519 0 0 44189 0 0 46568 0 0 32963 0 0 46258 0 0 34088 0 0 42623 0 0 48270 0 0 12639 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 75051000 0 75051000 0 NaN 726 448;859 396;390 396 2418;2577 2555;2556;2721 2749 3070;3071 2749 3070 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13347 2749 3070 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13347 2749 3070 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13347 P21127;Q9UQ88 283;271 P21127 P21127 Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A CDK11B;CDK11A sp|P21127|CD11B_HUMAN Cyclin-dependent kinase 11B OS=Homo sapiens GN=CDK11B PE=1 SV=3;sp|Q9UQ88|CD11A_HUMAN Cyclin-dependent kinase 11A OS=Homo sapiens GN=CDK11A PE=1 SV=4 0.936374 11.6781 8.5772E-05 121.72 99.524 121.72 1 S EKMEERDLLSDLQDISDSERKTSSAESSSAE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPXXXXXXXXXXX DLLSDLQDIS(0.936)DS(0.064)ER DLLS(-97.89)DLQDIS(11.68)DS(-11.68)ER 10 3 -1.324 2340.2 0 0 2811.3 0 0 2324 0 0 3213.7 0 0 3177.6 0 0 2377 0 0 2832.7 0 0 2767 0 0 3012.9 0 0 7861.5 0 0 2214.4 0 0 2658 0 0 2350.9 0 0 3261.7 0 0 3169.6 0 0 2439.7 0 0 2905 0 0 2997.3 0 0 2965.2 0 0 7466.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6739200 6739200 0 0 NaN 727 449 283 283 741 785 836 923 836 923 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21388 836 923 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21388 836 923 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21388 P21127;Q9UQ88 589;577 P21127 P21127 Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A CDK11B;CDK11A sp|P21127|CD11B_HUMAN Cyclin-dependent kinase 11B OS=Homo sapiens GN=CDK11B PE=1 SV=3;sp|Q9UQ88|CD11A_HUMAN Cyclin-dependent kinase 11A OS=Homo sapiens GN=CDK11A PE=1 SV=4 1 82.6485 5.74071E-05 138.66 79.414 138.66 1 S GILKVGDFGLAREYGSPLKAYTPVVVTLWYR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX EYGS(1)PLK EY(-82.65)GS(82.65)PLK 4 2 0.19025 44258 0 0 69562 0 0 46296 0 0 58871 0 0 56157 0 0 45599 0 0 63273 0 0 57222 0 0 61284 0 0 8331.8 0 0 41887 0 0 65652 0 0 46634 0 0 60887 0 0 56504 0 0 46460 0 0 64011 0 0 57199 0 0 60554 0 0 9169.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 191960000 191960000 0 0 NaN 728 449 589 589 1231 1295 1395 1546 1395 1546 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12595 1395 1546 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12595 1395 1546 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12595 P21127;Q9UQ88 65;65 P21127 P21127 Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A CDK11B;CDK11A sp|P21127|CD11B_HUMAN Cyclin-dependent kinase 11B OS=Homo sapiens GN=CDK11B PE=1 SV=3;sp|Q9UQ88|CD11A_HUMAN Cyclin-dependent kinase 11A OS=Homo sapiens GN=CDK11A PE=1 SV=4 0.999869 39.3036 0.00317922 91.699 56.542 91.699 1 S EGELRDHRMEITIRNSPYRREDSMEDRGEED X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX MEITIRNS(1)PYR MEIT(-48.53)IRNS(39.3)PY(-39.3)R 8 3 1.4515 50139 0 0 54795 0 0 48611 0 0 56197 0 0 55551 0 0 50593 0 0 62402 0 0 60590 0 0 61690 0 0 10922 0 0 47438 0 0 51771 0 0 49134 0 0 57526 0 0 56060 0 0 51108 0 0 63171 0 0 60718 0 0 60900 0 0 11687 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 272830000 272830000 0 0 NaN 729 449 65 65 2683;2684 2838;2839;2840 3045;3046;3047 3391;3392;3393 3046 3392 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14468 3046 3392 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14468 3046 3392 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14468 P21127;Q9UQ88 47;47 P21127 P21127 Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A CDK11B;CDK11A sp|P21127|CD11B_HUMAN Cyclin-dependent kinase 11B OS=Homo sapiens GN=CDK11B PE=1 SV=3;sp|Q9UQ88|CD11A_HUMAN Cyclin-dependent kinase 11A OS=Homo sapiens GN=CDK11A PE=1 SV=4 1 117.767 0.000284382 117.77 67.833 117.77 1 S IKRLKNSDDRDSKRDSLEEGELRDHRMEITI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX RDS(1)LEEGELR RDS(117.77)LEEGELR 3 2 -0.85514 15106 0 0 19981 0 0 16080 0 0 23783 0 0 25032 0 0 17976 0 0 24950 0 0 20971 0 0 25118 0 0 25708 0 0 14298 0 0 18897 0 0 16245 0 0 24094 0 0 24873 0 0 18364 0 0 25406 0 0 21694 0 0 24777 0 0 24693 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10714000 10714000 0 0 NaN 730 449 47 47 3210 3404 3638 4034 3638 4034 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9448 3638 4034 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9448 3638 4034 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9448 P21127 115 P21127 P21127 Cyclin-dependent kinase 11B CDK11B sp|P21127|CD11B_HUMAN Cyclin-dependent kinase 11B OS=Homo sapiens GN=CDK11B PE=1 SV=3 0.813848 6.40676 0.00586547 93.556 69.401 93.556 1 S RKDEKRKEKRRHRSHSAEGGKHARVKEKERE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX S(0.186)HS(0.814)AEGGK S(-6.41)HS(6.41)AEGGK 3 2 0.23894 3393.6 0 0 3776.7 0 0 3131.8 0 0 4504.9 0 0 3248.2 0 0 3132.5 0 0 4279.2 0 0 4135.1 0 0 4275.9 0 0 1401.8 0 0 3210.3 0 0 3571.8 0 0 3171.9 0 0 4558.9 0 0 3304 0 0 3216.3 0 0 4306.2 0 0 4151.2 0 0 4219.2 0 0 1415.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 3148300 3148300 0 0 NaN 731 449 115 115 3837 4090 4365 4854 4365 4854 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5193 4365 4854 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5193 4365 4854 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5193 P21291 192 P21291 P21291 Cysteine and glycine-rich protein 1 CSRP1 sp|P21291|CSRP1_HUMAN Cysteine and glycine-rich protein 1 OS=Homo sapiens GN=CSRP1 PE=1 SV=3 1 196.802 1.44181E-10 196.8 175.5 196.8 1 S PKGFGFGQGAGALVHSE______________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPXXXXXXXXXXXXXX GFGFGQGAGALVHS(1)E GFGFGQGAGALVHS(196.8)E 14 2 -0.43409 8334.6 0 0 6941.8 0 0 8039.7 0 0 7551.5 0 0 14013 0 0 8474.1 0 0 14667 0 0 11461 0 0 8716.4 0 0 33432 0 0 7885.6 0 0 6561.2 0 0 8186.8 0 0 7731.2 0 0 13871 0 0 8553.2 0 0 14735 0 0 12387 0 0 8852.9 0 0 31745 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 42612000 42612000 0 0 NaN 732 450 192 192 1418 1495 1604 1774 1604 1774 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19077 1604 1774 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19077 1604 1774 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19077 P21333 1084 P21333 P21333 Filamin-A FLNA sp|P21333|FLNA_HUMAN Filamin-A OS=Homo sapiens GN=FLNA PE=1 SV=4 0.999987 48.7854 4.0799E-11 207.55 163.95 207.55 1 S KVKAFGPGLQGGSAGSPARFTIDTKGAGTGG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPXXXXXXXXXXXX AFGPGLQGGSAGS(1)PAR AFGPGLQGGS(-48.79)AGS(48.79)PAR 13 2 0.26297 11712 0 0 20164 0 0 11404 0 0 17383 0 0 24782 0 0 10127 0 0 24188 0 0 19070 0 0 19883 0 0 13919 0 0 11081 0 0 19033 0 0 11664 0 0 17902 0 0 24347 0 0 10613 0 0 24531 0 0 19201 0 0 19801 0 0 13548 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 55979000 55979000 0 0 NaN 733 451 1084 1084 173 181 195 220 195 220 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13754 195 220 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13754 195 220 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13754 P21333 2152 P21333 P21333 Filamin-A FLNA sp|P21333|FLNA_HUMAN Filamin-A OS=Homo sapiens GN=FLNA PE=1 SV=4 1 66.4464 1.06135E-22 262.55 230.16 262.55 1 S EGRVKESITRRRRAPSVANVGSHCDLSLKIP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPXX RAPS(1)VANVGSHCDLSLK RAPS(66.45)VANVGS(-66.45)HCDLS(-116.38)LK 4 3 -0.16499 51630 0 0 38352 0 0 57374 0 0 37056 0 0 125720 0 0 58663 0 0 151730 0 0 80809 0 0 43567 0 0 21390 0 0 48877 0 0 36222 0 0 58327 0 0 38474 0 0 123810 0 0 58154 0 0 150240 0 0 80843 0 0 47575 0 0 22012 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 198600000 198600000 0 0 NaN 734 451 2152 2152 377;3187 403;3380 438;3612 486;4003 3612 4003 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13675 3612 4003 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13675 3612 4003 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13675 P21333 1459 P21333 P21333 Filamin-A FLNA sp|P21333|FLNA_HUMAN Filamin-A OS=Homo sapiens GN=FLNA PE=1 SV=4 1 98.0687 4.14715E-16 232.28 204.41 232.28 1 S DVTDASKVKCSGPGLSPGMVRANLPQSFQVD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX CSGPGLS(1)PGMVR CS(-98.07)GPGLS(98.07)PGMVR 7 2 -0.85289 81747 0 0 107110 0 0 85070 0 0 101360 0 0 138920 0 0 84003 0 0 141040 0 0 128970 0 0 112040 0 0 698200 0 0 77366 0 0 101150 0 0 86133 0 0 104140 0 0 137800 0 0 86853 0 0 142670 0 0 148660 0 0 111780 0 0 660420 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 277600000 277600000 0 0 NaN 735 451 1459 1459 620 660;661 703;704;705 779;780;781 705 781 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13648 705 781 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13648 705 781 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13648 P21359 2515 P21359 P21359 Neurofibromin;Neurofibromin truncated NF1 sp|P21359|NF1_HUMAN Neurofibromin OS=Homo sapiens GN=NF1 PE=1 SV=2 0.680361 3.29128 1.99858E-07 140.07 114.56 140.07 1 S SEGYLAATYPTVGQTSPRARKSMSLDMGQPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX GSEGYLAATYPT(0.001)VGQT(0.319)S(0.68)PR GS(-116.55)EGY(-125.55)LAAT(-50.6)Y(-76.63)PT(-29.49)VGQT(-3.29)S(3.29)PR 17 3 -0.42253 8324.3 0 0 6557.5 0 0 8919.1 0 0 6653 0 0 6969.5 0 0 8877 0 0 6804.3 0 0 6510.5 0 0 7190.1 0 0 11044 0 0 7879.1 0 0 6195.2 0 0 8922.7 0 0 6861 0 0 7185.8 0 0 8789.7 0 0 6944.7 0 0 6955 0 0 7078.1 0 0 10550 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22648000 22648000 0 0 NaN 736 452 2515 2515 1601 1687 1823 2026 1823 2026 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16114 1823 2026 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16114 1823 2026 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16114 P21359 2817 P21359 P21359 Neurofibromin;Neurofibromin truncated NF1 sp|P21359|NF1_HUMAN Neurofibromin OS=Homo sapiens GN=NF1 PE=1 SV=2 0.999162 30.7627 3.92783E-05 135.56 80.95 135.56 1 S SPTTGHCNSGRTRHGSASQVQKQRSAGSFKR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX HGS(0.999)AS(0.001)QVQK HGS(30.76)AS(-30.76)QVQK 3 3 -1.395 10101 0 0 11798 0 0 9852.2 0 0 12165 0 0 11438 0 0 12162 0 0 12706 0 0 13030 0 0 13223 0 0 2930.9 0 0 9557.6 0 0 11147 0 0 9956.7 0 0 12468 0 0 11532 0 0 12207 0 0 12887 0 0 13125 0 0 13025 0 0 3061.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20373000 20373000 0 0 NaN 737 452 2817 2817 1714 1808 1953 2177 1953 2177 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6061 1953 2177 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6061 1953 2177 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6061 P21359 2829 P21359 P21359 Neurofibromin;Neurofibromin truncated NF1 sp|P21359|NF1_HUMAN Neurofibromin OS=Homo sapiens GN=NF1 PE=1 SV=2 0.999877 39.1113 0.0508487 53.517 33.378 53.517 1 S RHGSASQVQKQRSAGSFKRNSIKKIV_____ X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX SAGS(1)FKR S(-39.11)AGS(39.11)FKR 4 2 0.13749 19881 0 0 25549 0 0 20272 0 0 24018 0 0 21565 0 0 19488 0 0 24560 0 0 22712 0 0 26086 0 0 3870.2 0 0 18814 0 0 24127 0 0 20411 0 0 24681 0 0 21852 0 0 19784 0 0 24898 0 0 22773 0 0 25674 0 0 4169.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24835000 24835000 0 0 NaN 738 452 2829 2829 3584 3807 4060 4515 4060 4515 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8150 4060 4515 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8150 4060 4515 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8150 P21359 2543 P21359 P21359 Neurofibromin;Neurofibromin truncated NF1 sp|P21359|NF1_HUMAN Neurofibromin OS=Homo sapiens GN=NF1 PE=1 SV=2 1 64.9301 9.99161E-05 125.03 87.921 125.03 1 S QPSQANTKKLLGTRKSFDHLISDTKAPKRQE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPXXXXXX S(1)FDHLISDTK S(64.93)FDHLIS(-64.93)DT(-104.75)K 1 3 -0.55829 5214.2 0 0 6037.9 0 0 5726.6 0 0 5441.5 0 0 6972.9 0 0 5378.9 0 0 7643.8 0 0 6939.3 0 0 6373.6 0 0 2923.7 0 0 4935.9 0 0 5700.4 0 0 5753.4 0 0 5622.5 0 0 7010.8 0 0 5419.4 0 0 7713.7 0 0 6988.2 0 0 6342.7 0 0 2913.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9576700 9576700 0 0 NaN 739 452 2543 2543 3732 3973 4237 4710 4237 4710 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17708 4237 4710 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17708 4237 4710 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17708 P21796 104 P21796 P21796 Voltage-dependent anion-selective channel protein 1 VDAC1 sp|P21796|VDAC1_HUMAN Voltage-dependent anion-selective channel protein 1 OS=Homo sapiens GN=VDAC1 PE=1 SV=2 0.999976 46.3281 2.00882E-07 164.53 132.7 164.53 1 S DQLARGLKLTFDSSFSPNTGKKNAKIKTGYK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPXXXXXXXXX LTFDSSFS(1)PNTGK LT(-85.19)FDS(-60.93)S(-46.33)FS(46.33)PNT(-68.43)GK 8 3 -0.65111 24247 0 0 30399 0 0 24708 0 0 30775 0 0 28706 0 0 22027 0 0 28248 0 0 27864 0 0 32612 0 0 23033 0 0 22945 0 0 28719 0 0 24901 0 0 31435 0 0 28893 0 0 22586 0 0 28895 0 0 28417 0 0 31993 0 0 22333 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 151530000 151530000 0 0 NaN 740 453 104 104 2617;2618 2764;2765 2964;2965 3301;3302 2964 3301 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19667 2964 3301 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19667 2964 3301 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19667 P21796 57 P21796 P21796 Voltage-dependent anion-selective channel protein 1 VDAC1 sp|P21796|VDAC1_HUMAN Voltage-dependent anion-selective channel protein 1 OS=Homo sapiens GN=VDAC1 PE=1 SV=2 0.994726 23.0757 0.0391916 55.806 26.657 55.806 1 S TSSGSANTETTKVTGSLETKYRWTEYGLTFT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX VT(0.005)GS(0.995)LETK VT(-23.08)GS(23.08)LET(-34.24)K 4 2 0.20203 17126 0 0 28395 0 0 17338 0 0 25616 0 0 18762 0 0 16579 0 0 19635 0 0 22026 0 0 28802 0 0 10099 0 0 16207 0 0 26808 0 0 17465 0 0 26326 0 0 18977 0 0 17108 0 0 20196 0 0 22187 0 0 28030 0 0 10019 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13625000 13625000 0 0 NaN 741 453 57 57 5289 5636 6007 6673 6007 6673 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12479 6007 6673 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12479 6007 6673 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12479 P22059 379 P22059 P22059 Oxysterol-binding protein 1 OSBP sp|P22059|OSBP1_HUMAN Oxysterol-binding protein 1 OS=Homo sapiens GN=OSBP PE=1 SV=1 0.612298 1.74043 3.69055E-31 300.06 266.76 101.58 1;2 S EIITMPENLGHKRTGSNISGASSDISLDEQY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP T(0.425)GS(0.612)NIS(0.935)GAS(0.012)S(0.016)DISLDEQYK T(-1.74)GS(1.74)NIS(11.6)GAS(-19.74)S(-18.21)DIS(-40.21)LDEQY(-88.01)K 3 3 -0.1642 4548.4 17252 0 9430.5 18828 0 4983.2 17163 0 9136.8 16551 0 2765.4 12199 0 4818.2 15372 0 4036.7 14614 0 6243.1 20003 0 9998.5 14605 0 8270.9 99404 0 4305.6 16325 0 8907 17773 0 4968 17231 0 9329.9 17114 0 2960.9 12707 0 5055.7 15706 0 4211.3 14760 0 6456.3 22880 0 9612.7 14411 0 7932.6 94064 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 38733000 10390000 28343000 0 NaN 742 454 379 379 3518;4730 3735;5043;5044 5374;5375 5976;5977;5978 5375 5977 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17055 5374 5976 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16501 5374 5976 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16501 P22059 382 P22059 P22059 Oxysterol-binding protein 1 OSBP sp|P22059|OSBP1_HUMAN Oxysterol-binding protein 1 OS=Homo sapiens GN=OSBP PE=1 SV=1 0.950123 15.9697 5.57117E-11 182.72 163.41 182.72 1;2 S TMPENLGHKRTGSNISGASSDISLDEQYKHQ X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPPXX T(0.024)GS(0.018)NIS(0.95)GAS(0.008)SDISLDEQYK T(-15.97)GS(-17.33)NIS(15.97)GAS(-20.61)S(-53.65)DIS(-93.89)LDEQY(-159)K 6 3 0.64582 8486.7 23368 0 11152 26373 0 8548.5 23417 0 11099 23803 0 11027 18842 0 9553.3 21795 0 10480 21311 0 12341 28264 0 10990 22558 0 13790 134570 0 8030.9 22113 0 10535 24899 0 8633.6 23526 0 11375 24564 0 11037 19427 0 9705.6 22270 0 10708 21609 0 12687 32155 0 10822 22205 0 13271 127360 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 62293000 14330000 47964000 0 NaN 743 454 382 382 3518;4730 3735;5043;5044 3981;5373;5375 4420;5975;5977;5978 5373 5975 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16306 5373 5975 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16306 5373 5975 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16306 P22234 107 P22234 P22234 Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase PAICS sp|P22234|PUR6_HUMAN Multifunctional protein ADE2 OS=Homo sapiens GN=PAICS PE=1 SV=3 0.877277 8.5421 0.00932145 75.695 52.319 75.695 1 S EMIPIEWVCRRIATGSFLKRNPGVKEGYKFY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX IAT(0.123)GS(0.877)FLKR IAT(-8.54)GS(8.54)FLKR 5 3 0.10342 5996.7 0 0 5774.6 0 0 5143.4 0 0 5514.7 0 0 7640.9 0 0 5754.1 0 0 6720.8 0 0 7030.9 0 0 5135.8 0 0 1284.1 0 0 5671.2 0 0 5453.6 0 0 5257 0 0 5682 0 0 7592 0 0 5775.4 0 0 6842 0 0 7041.7 0 0 5134.7 0 0 1371.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8951400 8951400 0 0 NaN 744 456 107 107 1780 1879 2026 2257 2026 2257 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16466 2026 2257 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16466 2026 2257 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16466 P22314 13 P22314 P22314 Ubiquitin-like modifier-activating enzyme 1 UBA1 sp|P22314|UBA1_HUMAN Ubiquitin-like modifier-activating enzyme 1 OS=Homo sapiens GN=UBA1 PE=1 SV=3 1 74.6982 7.95842E-26 273.52 254.31 74.698 1 S ___MSSSPLSKKRRVSGPDPKPGSNCSPAQS X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RVS(1)GPDPK RVS(74.7)GPDPK 3 3 0.20569 49013 0 0 42145 0 0 56491 0 0 39816 0 0 79957 0 0 54238 0 0 88854 0 0 65781 0 0 43349 0 0 163880 0 0 46407 0 0 39800 0 0 56758 0 0 41255 0 0 79838 0 0 54176 0 0 88772 0 0 70474 0 0 44703 0 0 155840 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 162230000 162230000 0 0 NaN 745 457 13 13 3553;3554;5248 3771;3772;3773;5594 4017;4018;4019 4458;4459;4460;4461;4462 4017 4458 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7841 4019 4460 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18946 4019 4460 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18946 P22314 24 P22314 P22314 Ubiquitin-like modifier-activating enzyme 1 UBA1 sp|P22314|UBA1_HUMAN Ubiquitin-like modifier-activating enzyme 1 OS=Homo sapiens GN=UBA1 PE=1 SV=3 0.986882 19.2933 3.23114E-05 124.17 103.86 124.17 1 S KRRVSGPDPKPGSNCSPAQSVLSEVPSVPTN X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPPPPPPPP VS(0.001)GPDPKPGS(0.012)NCS(0.987)PAQS(0.001)VLSEVPSVPTNGMAK VS(-30.71)GPDPKPGS(-19.29)NCS(19.29)PAQS(-31.7)VLS(-72.27)EVPS(-96.63)VPT(-95.73)NGMAK 13 4 -2.3338 4463.7 0 0 2164 0 0 3200.3 0 0 1780 0 0 3508.5 0 0 4064.9 0 0 3037 0 0 2805.7 0 0 2093.4 0 0 19068 0 0 4219.1 0 0 2042 0 0 3298 0 0 1887.8 0 0 3534.7 0 0 3992.6 0 0 3088.2 0 0 3437.7 0 0 2105.6 0 0 18020 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8708500 8708500 0 0 NaN 746 457 24 24 3554;5248 3772;3773;5594 5963 6627 5963 6627 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19845 5963 6627 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19845 5963 6627 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19845 P22314 3 P22314 P22314 Ubiquitin-like modifier-activating enzyme 1 UBA1 sp|P22314|UBA1_HUMAN Ubiquitin-like modifier-activating enzyme 1 OS=Homo sapiens GN=UBA1 PE=1 SV=3 0.457868 1.6488 0.00862972 45.161 16.464 45.161 S _____________MSSSPLSKKRRVSGPDPK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPXXXXXXXXX S(0.22)S(0.458)S(0.313)PLS(0.009)KK S(-3.18)S(1.65)S(-1.65)PLS(-17.15)KK 2 2 0.37035 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 747 457 3 3 4443;4444 4734;4735 5040 5590 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10855 5040 5590 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10855 5040 5590 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10855 P22314 4 P22314 P22314 Ubiquitin-like modifier-activating enzyme 1 UBA1 sp|P22314|UBA1_HUMAN Ubiquitin-like modifier-activating enzyme 1 OS=Homo sapiens GN=UBA1 PE=1 SV=3 0.906509 10.6012 0.00569166 60.019 53.565 60.019 1 S ____________MSSSPLSKKRRVSGPDPKP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX S(0.012)S(0.079)S(0.907)PLS(0.002)K S(-18.72)S(-10.6)S(10.6)PLS(-25.81)K 3 2 0.58189 34175 0 0 23853 0 0 32073 0 0 26784 0 0 38738 0 0 34479 0 0 40957 0 0 31492 0 0 24515 0 0 2759.5 0 0 32330 0 0 22550 0 0 32503 0 0 27446 0 0 38934 0 0 34184 0 0 41134 0 0 31788 0 0 24886 0 0 3327.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 674430000 674430000 0 0 NaN 748 457 4 4 4443;4444 4734;4735 5039 5589 5039 5589 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10153 5039 5589 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10153 5039 5589 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10153 P22415;Q15853 186;222 P22415 P22415 Upstream stimulatory factor 1;Upstream stimulatory factor 2 USF1;USF2 sp|P22415|USF1_HUMAN Upstream stimulatory factor 1 OS=Homo sapiens GN=USF1 PE=1 SV=1;sp|Q15853|USF2_HUMAN Upstream stimulatory factor 2 OS=Homo sapiens GN=USF2 PE=2 SV=1 0.998332 28.7917 0.00113818 109.02 85.701 109.02 1 S QGGSQRSIAPRTHPYSPKSEAPRTTRDEKRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX THPY(0.001)S(0.998)PK T(-34.56)HPY(-28.79)S(28.79)PK 5 3 0.21791 59733 0 0 42667 0 0 63175 0 0 38779 0 0 27146 0 0 59578 0 0 30750 0 0 41258 0 0 41826 0 0 2061.8 0 0 56535 0 0 40284 0 0 62981 0 0 40388 0 0 29737 0 0 58564 0 0 31431 0 0 42156 0 0 40800 0 0 2896.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 64384000 64384000 0 0 NaN 749 458 186 186 4737 5052 5384 5987 5384 5987 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7947 5384 5987 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7947 5384 5987 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7947 P22626 259 P22626 P22626 Heterogeneous nuclear ribonucleoproteins A2/B1 HNRNPA2B1 sp|P22626|ROA2_HUMAN Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Homo sapiens GN=HNRNPA2B1 PE=1 SV=2 1 76.8753 2.59793E-12 205.62 188.4 205.62 1 S YNGYGGGPGGGNFGGSPGYGGGRGGYGGGGP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPXXXXXXXX GFGDGYNGYGGGPGGGNFGGS(1)PGYGGGR GFGDGY(-155.11)NGY(-131.94)GGGPGGGNFGGS(76.88)PGY(-76.88)GGGR 21 3 0.14405 7990.9 0 0 14144 0 0 7523.2 0 0 12317 0 0 6511.7 0 0 9490.1 0 0 8792.8 0 0 11154 0 0 12817 0 0 27076 0 0 7559.7 0 0 13351 0 0 7594.3 0 0 12713 0 0 6703.8 0 0 9710.4 0 0 8951 0 0 11940 0 0 12475 0 0 25753 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 131620000 131620000 0 0 NaN 750 459 259 259 1416 1493 1602 1772 1602 1772 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16393 1602 1772 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16393 1602 1772 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16393 P22626 225 P22626 P22626 Heterogeneous nuclear ribonucleoproteins A2/B1 HNRNPA2B1 sp|P22626|ROA2_HUMAN Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Homo sapiens GN=HNRNPA2B1 PE=1 SV=2 1 136.075 2.07661E-05 136.08 105.53 136.08 1 S GDSRGGGGNFGPGPGSNFRGGSDGYGSGRGF X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX GGGGNFGPGPGS(1)NFR GGGGNFGPGPGS(136.08)NFR 12 2 -0.048709 17709 0 0 20504 0 0 16379 0 0 18652 0 0 15801 0 0 18888 0 0 16780 0 0 19824 0 0 19714 0 0 14109 0 0 16752 0 0 19359 0 0 16564 0 0 19268 0 0 16086 0 0 18960 0 0 17114 0 0 20274 0 0 19328 0 0 13744 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12867000 12867000 0 0 NaN 751 459 225 225 1434 1511 1620 1790 1620 1790 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12866 1620 1790 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12866 1620 1790 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12866 P22626 212 P22626 P22626 Heterogeneous nuclear ribonucleoproteins A2/B1 HNRNPA2B1 sp|P22626|ROA2_HUMAN Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Homo sapiens GN=HNRNPA2B1 PE=1 SV=2 1 70.6847 0.0160705 70.685 51.939 70.685 1 S QSSRSGRGGNFGFGDSRGGGGNFGPGPGSNF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X XXXXXXXPPPPPPPPPPXXXXXXXXXXXXXX GGNFGFGDS(1)R GGNFGFGDS(70.68)R 9 2 -0.85081 22007 0 0 15589 0 0 21012 0 0 17210 0 0 21831 0 0 22170 0 0 21437 0 0 19808 0 0 16022 0 0 5869.5 0 0 20821 0 0 14735 0 0 21225 0 0 17651 0 0 22095 0 0 21982 0 0 21692 0 0 20137 0 0 16039 0 0 5985.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22495000 22495000 0 0 NaN 752 459 212 212 1438 1515 1625 1795 1625 1795 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13942 1625 1795 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13942 1625 1795 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13942 P22626 341 P22626 P22626 Heterogeneous nuclear ribonucleoproteins A2/B1 HNRNPA2B1 sp|P22626|ROA2_HUMAN Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Homo sapiens GN=HNRNPA2B1 PE=1 SV=2 0.942855 12.1759 5.72685E-05 117.01 101.49 117.01 1 S NMGGPYGGGNYGPGGSGGSGGYGGRSRY___ X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPXXXXXX NMGGPYGGGNYGPGGS(0.943)GGS(0.057)GGYGGR NMGGPY(-77.43)GGGNY(-48.09)GPGGS(12.18)GGS(-12.18)GGY(-60.06)GGR 16 3 -1.7182 12596 0 0 10632 0 0 13069 0 0 9574.8 0 0 17392 0 0 13234 0 0 15954 0 0 14334 0 0 12397 0 0 8850.4 0 0 11921 0 0 10037 0 0 13183 0 0 9954.4 0 0 17371 0 0 13132 0 0 16212 0 0 14602 0 0 12383 0 0 8665.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17124000 17124000 0 0 NaN 753 459 341 341 2870 3041 3256 3612 3256 3612 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10330 3256 3612 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10330 3256 3612 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10330 P22670 159 P22670 P22670 MHC class II regulatory factor RFX1 RFX1 sp|P22670|RFX1_HUMAN MHC class II regulatory factor RFX1 OS=Homo sapiens GN=RFX1 PE=1 SV=2 0.999997 54.9443 9.05317E-13 203.78 177.31 203.78 1 S RLLVQTSVQAKPGHVSPLQLTNIQVPQQALP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP PGHVS(1)PLQLTNIQVPQQALPTQR PGHVS(54.94)PLQLT(-54.94)NIQVPQQALPT(-188.28)QR 5 3 -0.03633 5608.1 0 0 7149.6 0 0 7010.4 0 0 7449.1 0 0 4736.7 0 0 7144.9 0 0 5133.1 0 0 7492.8 0 0 8161.2 0 0 56461 0 0 5311.9 0 0 6755.7 0 0 6951.3 0 0 7625.3 0 0 4949.5 0 0 7286 0 0 5289 0 0 9203.7 0 0 7924.3 0 0 53339 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 18428000 18428000 0 0 NaN 754 460 159 159 2975 3154 3377 3744;3745 3377 3745 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19977 3377 3745 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19977 3377 3745 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19977 P22681 669 P22681 P22681 E3 ubiquitin-protein ligase CBL CBL sp|P22681|CBL_HUMAN E3 ubiquitin-protein ligase CBL OS=Homo sapiens GN=CBL PE=1 SV=2 0.800689 6.07401 8.03671E-16 219.3 189.76 219.3 1 S LVGPECDHPKIKPSSSANAIYSLAARPLPVP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPXXXXX IKPS(0.002)S(0.198)S(0.801)ANAIYSLAAR IKPS(-27.03)S(-6.07)S(6.07)ANAIY(-84.07)S(-69.86)LAAR 6 3 -0.56074 36519 0 0 56000 0 0 48001 0 0 51114 0 0 23856 0 0 46054 0 0 25203 0 0 50157 0 0 68742 0 0 8620 0 0 34600 0 0 52873 0 0 47381 0 0 52700 0 0 25695 0 0 46456 0 0 26782 0 0 50412 0 0 65982 0 0 9277.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 169580000 169580000 0 0 NaN 755 461 669 669 1869 1973 2131 2388 2131 2388 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17630 2131 2388 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17630 2131 2388 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17630 P22681 833 P22681 P22681 E3 ubiquitin-protein ligase CBL CBL sp|P22681|CBL_HUMAN E3 ubiquitin-protein ligase CBL OS=Homo sapiens GN=CBL PE=1 SV=2 1 79.1482 0.0147291 79.148 16.073 79.148 1 S QVPERPPKPFPRRINSERKAGSCQQGSGPAA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX RINS(1)ERK RINS(79.15)ERK 4 3 -0.45127 19877 0 0 17732 0 0 19544 0 0 19724 0 0 17434 0 0 19260 0 0 11059 0 0 15786 0 0 20576 0 0 3999.9 0 0 18807 0 0 16762 0 0 19661 0 0 20123 0 0 17735 0 0 19290 0 0 11824 0 0 16090 0 0 19898 0 0 4131.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14379000 14379000 0 0 NaN 756 461 833 833 3277 3477 3714 4127 3714 4127 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5838 3714 4127 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5838 3714 4127 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5838 P22681 483 P22681 P22681 E3 ubiquitin-protein ligase CBL CBL sp|P22681|CBL_HUMAN E3 ubiquitin-protein ligase CBL OS=Homo sapiens GN=CBL PE=1 SV=2 0.991379 20.6069 1.04035E-12 204.25 184.54 204.25 1 S FMMKELAGAKVERPPSPFSMAPQASLPPVPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP VERPPS(0.991)PFS(0.009)MAPQASLPPVPPR VERPPS(20.61)PFS(-20.61)MAPQAS(-98.9)LPPVPPR 6 3 1.6308 28570 0 0 26489 0 0 29513 0 0 29176 0 0 24117 0 0 31848 0 0 23788 0 0 27046 0 0 33263 0 0 61737 0 0 27038 0 0 25039 0 0 29597 0 0 29836 0 0 24796 0 0 31860 0 0 24489 0 0 29175 0 0 32419 0 0 58758 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 17725000 17725000 0 0 NaN 757 461 483 483 5101 5438 5791;5792 6436;6437;6438;6439;6440 5791 6437 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19755 5791 6437 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19755 5792 6440 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19582 P22694 339 P22694 P22694 cAMP-dependent protein kinase catalytic subunit beta PRKACB sp|P22694|KAPCB_HUMAN cAMP-dependent protein kinase catalytic subunit beta OS=Homo sapiens GN=PRKACB PE=1 SV=2 0.998667 28.7449 1.92197E-32 288.16 268.66 288.16 1 S DTSNFDDYEEEDIRVSITEKCAKEFGEF___ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX GSGDTSNFDDYEEEDIRVS(0.999)IT(0.001)EK GS(-231.38)GDT(-185.64)S(-172.71)NFDDY(-162.43)EEEDIRVS(28.74)IT(-28.74)EK 19 3 -0.31028 3598.6 0 0 2196 0 0 2522 0 0 2302.5 0 0 4490.7 0 0 2287.5 0 0 5157.7 0 0 5445.7 0 0 2229.9 0 0 98770 0 0 3401.1 0 0 2075.1 0 0 2626.8 0 0 2357.4 0 0 4447.6 0 0 2519.2 0 0 5137.9 0 0 8316.1 0 0 2324.4 0 0 93130 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 33395000 33395000 0 0 NaN 758 462 339 339 1607 1693 1829 2034 1829 2034 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17749 1829 2034 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17749 1829 2034 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17749 P23193 100 P23193 P23193 Transcription elongation factor A protein 1 TCEA1 sp|P23193|TCEA1_HUMAN Transcription elongation factor A protein 1 OS=Homo sapiens GN=TCEA1 PE=1 SV=2 0.999999 62.7469 1.00121E-22 269.08 233.25 269.08 1 S DLDEKKKEPAITSQNSPEAREESTSSGNVSN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPXXXXXXXXXXX KKEPAITSQNS(1)PEAR KKEPAIT(-70.47)S(-62.75)QNS(62.75)PEAR 11 3 -0.0033361 135060 0 0 104470 0 0 136980 0 0 101440 0 0 112630 0 0 129760 0 0 121590 0 0 123270 0 0 110270 0 0 17902 0 0 127810 0 0 98667 0 0 137540 0 0 104790 0 0 115850 0 0 128760 0 0 123030 0 0 124440 0 0 109280 0 0 19710 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 734220000 734220000 0 0 NaN 759 463 100 100 1082;2103 1140;2224 1228;2396 1350;2670;2671 2396 2671 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8663 2396 2671 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8663 2396 2671 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8663 P23443 447 P23443 P23443 Ribosomal protein S6 kinase beta-1 RPS6KB1 sp|P23443|KS6B1_HUMAN Ribosomal protein S6 kinase beta-1 OS=Homo sapiens GN=RPS6KB1 PE=1 SV=2 0.972994 15.5689 1.26207E-05 135.23 113 135.23 1 S IRSPRRFIGSPRTPVSPVKFSPGDFWGRGAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPXXX T(0.027)PVS(0.973)PVKFSPGDFWGR T(-15.57)PVS(15.57)PVKFS(-48)PGDFWGR 4 3 0.10514 14855 0 0 16473 0 0 14395 0 0 14963 0 0 15886 0 0 18345 0 0 15426 0 0 15767 0 0 17238 0 0 24592 0 0 14055 0 0 15552 0 0 14539 0 0 15510 0 0 16028 0 0 18251 0 0 15774 0 0 16656 0 0 16932 0 0 23521 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23150000 23150000 0 0 NaN 760 465 447 447 4867;4868 5192;5193 5532 6150 5532 6150 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22034 5532 6150 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22034 5532 6150 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22034 P23497 394 P23497 P23497 Nuclear autoantigen Sp-100 SP100 sp|P23497|SP100_HUMAN Nuclear autoantigen Sp-100 OS=Homo sapiens GN=SP100 PE=1 SV=3 0.994753 25.3666 0.00816814 75.589 51.738 75.589 1 S VPEPMDFRKLSTFRESFKKRVIGQDHDFSES X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX LS(0.003)T(0.002)FRES(0.995)FKK LS(-25.37)T(-26.26)FRES(25.37)FKK 7 4 -0.23764 23808 0 0 20287 0 0 25311 0 0 18674 0 0 28186 0 0 25250 0 0 30279 0 0 24924 0 0 20512 0 0 3864.5 0 0 22534 0 0 19155 0 0 25440 0 0 19378 0 0 28454 0 0 25019 0 0 30453 0 0 25130 0 0 20653 0 0 4215.8 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 50573000 50573000 0 0 NaN 761 466 394 394 2602;2603 2748;2749 2947;2948 3284;3285 2948 3285 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15594 2948 3285 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15594 2948 3285 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15594 P23528 3 P23528 P23528 Cofilin-1 CFL1 sp|P23528|COF1_HUMAN Cofilin-1 OS=Homo sapiens GN=CFL1 PE=1 SV=3 0.999963 44.338 4.49492E-08 94.692 82.164 94.692 1 S _____________MASGVAVSDGVIKVFNDM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPXXXXX AS(1)GVAVSDGVIK AS(44.34)GVAVS(-44.34)DGVIK 2 2 0.62624 56970 0 0 105130 0 0 51330 0 0 88742 0 0 97286 0 0 56717 0 0 105110 0 0 93961 0 0 104890 0 0 8973 0 0 53887 0 0 99221 0 0 52588 0 0 91603 0 0 96123 0 0 58763 0 0 106610 0 0 93076 0 0 103510 0 0 10624 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 331130000 331130000 0 0 NaN 762 467 3 3 461 491 528 592 528 592 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16997 528 592 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16997 528 592 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16997 P23528 24 P23528 P23528 Cofilin-1 CFL1 sp|P23528|COF1_HUMAN Cofilin-1 OS=Homo sapiens GN=CFL1 PE=1 SV=3 0.743904 6.41692 0.000317019 113.95 71.228 113.95 1 S DGVIKVFNDMKVRKSSTPEEVKKRKKAVLFC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX KS(0.086)S(0.744)T(0.17)PEEVK KS(-9.35)S(6.42)T(-6.42)PEEVK 3 3 0.62124 13427 0 0 18445 0 0 14360 0 0 17843 0 0 22270 0 0 11982 0 0 19653 0 0 17206 0 0 18960 0 0 2624.5 0 0 12709 0 0 17421 0 0 14498 0 0 18263 0 0 22095 0 0 12342 0 0 20112 0 0 17136 0 0 18737 0 0 2869.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 54161000 54161000 0 0 NaN 763 467 24 24 2235;4480 2363;4772 2544 2841 2544 2841 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8713 2544 2841 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8713 2544 2841 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8713 P23588 283 P23588 P23588 Eukaryotic translation initiation factor 4B EIF4B sp|P23588|IF4B_HUMAN Eukaryotic translation initiation factor 4B OS=Homo sapiens GN=EIF4B PE=1 SV=2 0.985673 18.3757 0.0157651 78.377 55.305 78.377 1 S RGYDSRIGSGRRAFGSGYRRDDDYRGGGDRY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX AFGS(0.986)GY(0.014)R AFGS(18.38)GY(-18.38)R 4 2 0.57197 35476 0 0 71234 0 0 36067 0 0 65684 0 0 22003 0 0 30113 0 0 29299 0 0 45605 0 0 72119 0 0 2298.3 0 0 33572 0 0 67261 0 0 36125 0 0 67209 0 0 23303 0 0 31970 0 0 30646 0 0 45214 0 0 69343 0 0 3219.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 134340000 134340000 0 0 NaN 764 468 283 283 175 183 197 222 197 222 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11334 197 222 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11334 197 222 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11334 P23588 207 P23588 P23588 Eukaryotic translation initiation factor 4B EIF4B sp|P23588|IF4B_HUMAN Eukaryotic translation initiation factor 4B OS=Homo sapiens GN=EIF4B PE=1 SV=2 0.993189 21.6401 0.001583 97.384 79.583 97.384 1 S SDKTDTDWRARPATDSFDDYPPRRGDDSFGD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPXXXXXXXX ARPAT(0.007)DS(0.993)FDDYPPR ARPAT(-21.64)DS(21.64)FDDY(-56.09)PPR 7 3 -0.79712 14887 0 0 13446 0 0 16572 0 0 14649 0 0 17092 0 0 16593 0 0 19299 0 0 18411 0 0 13139 0 0 6922.6 0 0 14093 0 0 12709 0 0 16601 0 0 14999 0 0 17340 0 0 16581 0 0 19370 0 0 18606 0 0 13226 0 0 6944.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22603000 22603000 0 0 NaN 765 468 207 207 422 451 486 542 486 542 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11435 486 542 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11435 486 542 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11435 P23588 406 P23588 P23588 Eukaryotic translation initiation factor 4B EIF4B sp|P23588|IF4B_HUMAN Eukaryotic translation initiation factor 4B OS=Homo sapiens GN=EIF4B PE=1 SV=2 1 95.4831 0.00343121 95.483 75.493 95.483 1;2 S LDEPKLERRPRERHPSWRSEETQERERSRTG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPXXXXXX ERHPS(1)WR ERHPS(95.48)WR 5 3 0.48422 139870 6084.2 0 181930 7580.2 0 131860 6067.5 0 181810 7352.1 0 170310 8319.1 0 138070 6755.3 0 172160 9051.5 0 158890 6997.7 0 174370 8110 0 8111.2 2261.1 0 132320 5757.2 0 171860 7159.4 0 133710 6139.6 0 185980 7553.2 0 170590 8318.8 0 140620 6805.1 0 175210 9152.7 0 158810 7078 0 171960 8042 0 11315 2291.1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 897410000 873650000 23756000 0 NaN 766 468 406 406 1119;1120 1178;1179 1268;1269 1394;1395;1396 1268 1394 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5982 1268 1394 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5982 1268 1394 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5982 P23588 409 P23588 P23588 Eukaryotic translation initiation factor 4B EIF4B sp|P23588|IF4B_HUMAN Eukaryotic translation initiation factor 4B OS=Homo sapiens GN=EIF4B PE=1 SV=2 0.784746 5.61776 0.00974576 79.293 67.854 79.293 2 S PKLERRPRERHPSWRSEETQERERSRTGSES X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY) XXXXXXXXPPPPPPPPPPPPPPXXXXXXXXX ERHPS(1)WRS(0.785)EET(0.215)QER ERHPS(53.8)WRS(5.62)EET(-5.62)QER 8 3 -0.4662 0 6084.2 0 0 7580.2 0 0 6067.5 0 0 7352.1 0 0 8319.1 0 0 6755.3 0 0 9051.5 0 0 6997.7 0 0 8110 0 0 2261.1 0 0 5757.2 0 0 7159.4 0 0 6139.6 0 0 7553.2 0 0 8318.8 0 0 6805.1 0 0 9152.7 0 0 7078 0 0 8042 0 0 2291.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 23756000 0 23756000 0 NaN 767 468 409 409 1120 1179 1269 1396 1269 1396 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6579 1269 1396 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6579 1269 1396 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6579 P23588 93 P23588 P23588 Eukaryotic translation initiation factor 4B EIF4B sp|P23588|IF4B_HUMAN Eukaryotic translation initiation factor 4B OS=Homo sapiens GN=EIF4B PE=1 SV=2 0.895314 9.53341 6.85402E-08 154.67 132.02 154.67 1 S RAAREPNIDRSRLPKSPPYTAFLGNLPYDVT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.895)PPY(0.005)T(0.1)AFLGNLPYDVTEESIK S(9.53)PPY(-22.53)T(-9.53)AFLGNLPY(-105.7)DVT(-119.51)EES(-136.66)IK 1 3 -0.064174 32762 0 0 75100 0 0 39501 0 0 69859 0 0 29188 0 0 43904 0 0 37950 0 0 63834 0 0 85586 0 0 134150 0 0 31026 0 0 70914 0 0 39278 0 0 71632 0 0 30398 0 0 45668 0 0 39514 0 0 67300 0 0 82427 0 0 127790 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 211040000 211040000 0 0 NaN 768 468 93 93 4151 4425 4716 5235 4716 5235 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23951 4716 5235 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23951 4716 5235 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23951 P23588 497 P23588 P23588 Eukaryotic translation initiation factor 4B EIF4B sp|P23588|IF4B_HUMAN Eukaryotic translation initiation factor 4B OS=Homo sapiens GN=EIF4B PE=1 SV=2 0.559185 2.99965 0.00286881 97.179 84.043 97.179 2 S NAWVKRSSNPPARSQSSDTEQQSPTSGGGKV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX S(0.133)QS(0.559)S(0.28)DT(0.028)EQQS(0.992)PT(0.006)S(0.001)GGGK S(-6.25)QS(3)S(-3)DT(-13.07)EQQS(22.08)PT(-22.08)S(-28.6)GGGK 3 3 1.7014 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 769 468 497 497 4247 4525;4526 4825 5356 4825 5356 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7063 4825 5356 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7063 4825 5356 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7063 P23588 498 P23588 P23588 Eukaryotic translation initiation factor 4B EIF4B sp|P23588|IF4B_HUMAN Eukaryotic translation initiation factor 4B OS=Homo sapiens GN=EIF4B PE=1 SV=2 0.912541 10.7844 4.88335E-11 198.35 157.55 197.85 1;2 S AWVKRSSNPPARSQSSDTEQQSPTSGGGKVA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPXX S(0.009)QS(0.076)S(0.913)DT(0.002)EQQS(0.999)PT(0.001)SGGGK S(-19.98)QS(-10.78)S(10.78)DT(-26.38)EQQS(30.26)PT(-30.26)S(-40.26)GGGK 4 3 0.63554 18196 14101 0 20813 14136 0 19747 14188 0 24146 14258 0 27344 13698 0 20072 13136 0 32988 12386 0 24349 14859 0 23954 15571 0 7977.7 6401.4 0 17224 13344 0 19680 13354 0 19899 14273 0 24524 14614 0 27371 13914 0 20370 13251 0 33061 12758 0 24498 15030 0 24019 15229 0 8075.5 6371.6 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 188610000 176700000 11920000 0 NaN 770 468 498 498 4247 4525;4526 4823;4824 5353;5354;5355 4824 5354 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6742 4823 5353 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6667 4823 5353 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6667 P23588 504 P23588 P23588 Eukaryotic translation initiation factor 4B EIF4B sp|P23588|IF4B_HUMAN Eukaryotic translation initiation factor 4B OS=Homo sapiens GN=EIF4B PE=1 SV=2 0.999461 32.6974 8.79171E-16 213.5 193.08 213.5 1;2 S SNPPARSQSSDTEQQSPTSGGGKVAPAQPSE X;X;X;X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPXXXXXXXX SQSSDTEQQS(0.999)PT(0.001)SGGGK S(-125.43)QS(-119.7)S(-113.9)DT(-98.11)EQQS(32.7)PT(-32.7)S(-57.64)GGGK 10 3 0.42678 12392 14101 0 18984 14136 0 13631 14188 0 21847 14258 0 10745 13698 0 13220 13136 0 10342 12386 0 15993 14859 0 21811 15571 0 4446.8 6401.4 0 11731 13344 0 17950 13354 0 13618 14273 0 22118 14614 0 11080 13914 0 13679 13251 0 10860 12758 0 16069 15030 0 21035 15229 0 4557.3 6371.6 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 195750000 183830000 11920000 0 NaN 771 468 504 504 4247 4525;4526 4822;4824;4825 5352;5354;5355;5356 4822 5352 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6275 4822 5352 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6275 4822 5352 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6275 P23588 418 P23588 P23588 Eukaryotic translation initiation factor 4B EIF4B sp|P23588|IF4B_HUMAN Eukaryotic translation initiation factor 4B OS=Homo sapiens GN=EIF4B PE=1 SV=2 0.333303 0 4.55482E-05 114.04 102.01 114.04 S RHPSWRSEETQERERSRTGSESSQTGTSTTS X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.333)RT(0.333)GS(0.333)ESSQTGTSTTSSR S(0)RT(0)GS(0)ES(-35.71)S(-56.74)QT(-81.33)GT(-99.09)S(-105.53)T(-109.6)T(-112.46)S(-113.61)S(-113.61)R 1 3 0.40098 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 772 468 418 418 4312 4597 4898 5441 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4637 4898 5441 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4637 4898 5441 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4637 P23588 422 P23588 P23588 Eukaryotic translation initiation factor 4B EIF4B sp|P23588|IF4B_HUMAN Eukaryotic translation initiation factor 4B OS=Homo sapiens GN=EIF4B PE=1 SV=2 0.333303 0 4.55482E-05 114.04 102.01 114.04 S WRSEETQERERSRTGSESSQTGTSTTSSRNA X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.333)RT(0.333)GS(0.333)ESSQTGTSTTSSR S(0)RT(0)GS(0)ES(-35.71)S(-56.74)QT(-81.33)GT(-99.09)S(-105.53)T(-109.6)T(-112.46)S(-113.61)S(-113.61)R 5 3 0.40098 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 773 468 422 422 4312;4726 4597;5038 4898 5441 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4637 4898 5441 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4637 4898 5441 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4637 P23588 424 P23588 P23588 Eukaryotic translation initiation factor 4B EIF4B sp|P23588|IF4B_HUMAN Eukaryotic translation initiation factor 4B OS=Homo sapiens GN=EIF4B PE=1 SV=2 0.814654 7.63303 0.000214209 102.4 81.53 102.4 1 S SEETQERERSRTGSESSQTGTSTTSSRNARR Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPXXXX T(0.001)GS(0.04)ES(0.815)S(0.14)QT(0.002)GTSTTSSR T(-27.38)GS(-13.04)ES(7.63)S(-7.63)QT(-25.34)GT(-32.68)S(-39.93)T(-47.09)T(-53.87)S(-60.08)S(-69.17)R 5 2 -0.30369 1476.9 0 0 381.43 0 0 2034.9 0 0 1135.2 0 0 1705.8 0 0 2297.3 0 0 1085.8 0 0 1800 0 0 1117.5 0 0 1342.1 0 0 1399.6 0 0 364.62 0 0 2011.7 0 0 1138.3 0 0 1741.7 0 0 2247.2 0 0 1135.9 0 0 1865.2 0 0 1101.3 0 0 1305.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 3028300 3028300 0 0 NaN 774 468 424 424 4312;4726 4597;5038 5367 5968 5367 5968 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5190 5367 5968 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5190 5367 5968 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5190 P23769 192 P23769 P23769 Endothelial transcription factor GATA-2 GATA2 sp|P23769|GATA2_HUMAN Endothelial transcription factor GATA-2 OS=Homo sapiens GN=GATA2 PE=1 SV=3 0.77542 6.61661 1.78282E-05 131.68 117.8 131.68 1 S PPKEVSPDPSTTGAASPASSSAGGSAARGED X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPPPPPXXX EVSPDPS(0.003)T(0.052)T(0.169)GAAS(0.775)PASSSAGGSAAR EVS(-43.78)PDPS(-23.66)T(-11.76)T(-6.62)GAAS(6.62)PAS(-33.31)S(-37.41)S(-41.46)AGGS(-57.29)AAR 13 3 -1.9102 13345 0 0 11809 0 0 15197 0 0 13967 0 0 24393 0 0 15061 0 0 24701 0 0 19985 0 0 16383 0 0 6334.3 0 0 12635 0 0 11168 0 0 15309 0 0 14227 0 0 24207 0 0 15121 0 0 24900 0 0 20046 0 0 16518 0 0 6427.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19047000 19047000 0 0 NaN 775 469 192 192 1220 1283 1382 1533 1382 1533 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8926 1382 1533 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8926 1382 1533 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8926 P24928 1861 P24928 P24928 DNA-directed RNA polymerase II subunit RPB1 POLR2A sp|P24928|RPB1_HUMAN DNA-directed RNA polymerase II subunit RPB1 OS=Homo sapiens GN=POLR2A PE=1 SV=2 0.746611 6.89834 0.0124071 71.148 54.482 71.148 2 S YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPXXX Y(0.005)S(0.747)PT(0.094)S(0.155)PKY(0.002)S(0.45)PT(0.446)S(0.1)PK Y(-18.96)S(6.9)PT(-9.15)S(-6.9)PKY(-26.76)S(0)PT(0)S(-6.63)PK 2 3 -3.3413 0 19947 0 0 25262 0 0 20398 0 0 23413 0 0 19570 0 0 20951 0 0 19644 0 0 21837 0 0 24200 0 0 28080 0 0 18877 0 0 23854 0 0 20504 0 0 24113 0 0 19914 0 0 21174 0 0 20117 0 0 22716 0 0 23685 0 0 26946 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 14186000 0 14186000 0 NaN 776 470 1861 1861 5438;5439 5792;5793 6185 6884 6185 6884 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13270 6185 6884 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13270 6185 6884 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13270 P24928 1864 P24928 P24928 DNA-directed RNA polymerase II subunit RPB1 POLR2A sp|P24928|RPB1_HUMAN DNA-directed RNA polymerase II subunit RPB1 OS=Homo sapiens GN=POLR2A PE=1 SV=2 0.956258 13.3996 0.00218463 104.48 48.917 104.48 1 S SSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX YSPT(0.044)S(0.956)PK Y(-67.78)S(-45.33)PT(-13.4)S(13.4)PK 5 2 0.39413 123340 0 0 81102 0 0 121140 0 0 69511 0 0 64275 0 0 117800 0 0 81458 0 0 95938 0 0 80330 0 0 9368.7 0 0 116700 0 0 76548 0 0 121440 0 0 72855 0 0 68826 0 0 115660 0 0 82061 0 0 97362 0 0 79309 0 0 11042 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 170550000 170550000 0 0 NaN 777 470 1864 1864 5438;5439 5792;5793 6184 6883 6184 6883 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10107 6184 6883 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10107 6184 6883 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10107 P24928 1868 P24928 P24928 DNA-directed RNA polymerase II subunit RPB1 POLR2A sp|P24928|RPB1_HUMAN DNA-directed RNA polymerase II subunit RPB1 OS=Homo sapiens GN=POLR2A PE=1 SV=2 0.450331 0 0.0124071 71.148 54.482 71.148 S YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPXXXXXXXXXX Y(0.005)S(0.747)PT(0.094)S(0.155)PKY(0.002)S(0.45)PT(0.446)S(0.1)PK Y(-18.96)S(6.9)PT(-9.15)S(-6.9)PKY(-26.76)S(0)PT(0)S(-6.63)PK 9 3 -3.3413 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 778 470 1868 1868 5439 5793 6185 6884 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13270 6185 6884 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13270 6185 6884 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13270 P24928 1913 P24928 P24928 DNA-directed RNA polymerase II subunit RPB1 POLR2A sp|P24928|RPB1_HUMAN DNA-directed RNA polymerase II subunit RPB1 OS=Homo sapiens GN=POLR2A PE=1 SV=2 0.856106 8.51008 9.16785E-05 128.59 100.29 120.54 1 S TSPVYTPTSPKYSPTSPTYSPTSPKYSPTSP X;X;X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPXXXXXX YS(0.018)PT(0.121)S(0.856)PT(0.005)YSPTSPK Y(-62.43)S(-16.78)PT(-8.51)S(8.51)PT(-22.12)Y(-54.65)S(-62.06)PT(-88.74)S(-93.02)PK 5 3 -0.13999 22460 0 0 18041 0 0 24874 0 0 19887 0 0 29169 0 0 26132 0 0 35707 0 0 27807 0 0 20768 0 0 11260 0 0 21262 0 0 17053 0 0 24973 0 0 20407 0 0 29426 0 0 25957 0 0 35624 0 0 28166 0 0 21126 0 0 11246 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 104150000 104150000 0 0 NaN 779 470 1913 1913 5440 5794;5795 6187 6886 6187 6886 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13425 6188 6887 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13822 6187 6886 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13425 P24928 1917 P24928 P24928 DNA-directed RNA polymerase II subunit RPB1 POLR2A sp|P24928|RPB1_HUMAN DNA-directed RNA polymerase II subunit RPB1 OS=Homo sapiens GN=POLR2A PE=1 SV=2 0.976437 17.6394 1.26165E-05 136.34 90.093 136.34 1 S YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPXXXXXXXXXX YSPTSPT(0.007)YS(0.976)PT(0.017)SPK Y(-108.69)S(-75.08)PT(-67.86)S(-60.43)PT(-21.71)Y(-67.23)S(17.64)PT(-17.64)S(-37.7)PK 9 3 -0.23694 15931 0 0 12923 0 0 15144 0 0 12349 0 0 16425 0 0 16831 0 0 18481 0 0 16313 0 0 13239 0 0 15931 0 0 15072 0 0 12205 0 0 15314 0 0 12786 0 0 16616 0 0 16694 0 0 18570 0 0 16863 0 0 13285 0 0 15379 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 99401000 99401000 0 0 NaN 780 470 1917 1917 5440 5794;5795 6186 6885 6186 6885 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13224 6186 6885 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13224 6186 6885 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13224 P24928 1892 P24928 P24928 DNA-directed RNA polymerase II subunit RPB1 POLR2A sp|P24928|RPB1_HUMAN DNA-directed RNA polymerase II subunit RPB1 OS=Homo sapiens GN=POLR2A PE=1 SV=2 0.656545 6.18148 1.81754E-10 175.97 149.24 175.97 1;2 S TSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP YS(0.027)PT(0.158)S(0.657)PT(0.158)YSPTSPVYTPTSPK Y(-70.38)S(-13.84)PT(-6.18)S(6.18)PT(-6.18)Y(-50.07)S(-51.7)PT(-74.67)S(-90.89)PVY(-137.1)T(-141.8)PT(-153.57)S(-157.87)PK 5 3 -1.6262 22631 7420.5 0 20247 9538.1 0 24214 7248.8 0 20094 9720.6 0 22701 9527.5 0 30010 8769 0 28334 11596 0 28855 10859 0 21199 12492 0 103490 33492 0 21421 7021 0 19125 9011.3 0 24283 7340.8 0 20801 9954.3 0 23199 9564.1 0 29818 8921.3 0 28375 11729 0 32106 11820 0 21220 12288 0 98111 31788 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 58582000 44220000 14362000 0 NaN 781 470 1892 1892 5441 5796;5797 6190;6191 6889;6890;6891 6190 6889 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16982 6190 6889 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16982 6190 6889 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16982 P24928 1906 P24928 P24928 DNA-directed RNA polymerase II subunit RPB1 POLR2A sp|P24928|RPB1_HUMAN DNA-directed RNA polymerase II subunit RPB1 OS=Homo sapiens GN=POLR2A PE=1 SV=2 0.725629 4.40488 5.80794E-08 163.14 144.42 163.14 2 S TSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;Phospho (STY);X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX YS(0.011)PT(0.081)S(0.614)PT(0.288)YS(0.006)PTSPVYT(0.011)PT(0.263)S(0.726)PK Y(-52.79)S(-17.38)PT(-8.8)S(3.28)PT(-3.28)Y(-39.29)S(-19.96)PT(-59.14)S(-78.97)PVY(-62.76)T(-17.96)PT(-4.4)S(4.4)PK 19 3 1.9105 0 7420.5 0 0 9538.1 0 0 7248.8 0 0 9720.6 0 0 9527.5 0 0 8769 0 0 11596 0 0 10859 0 0 12492 0 0 33492 0 0 7021 0 0 9011.3 0 0 7340.8 0 0 9954.3 0 0 9564.1 0 0 8921.3 0 0 11729 0 0 11820 0 0 12288 0 0 31788 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 14362000 0 14362000 0 NaN 782 470 1906 1906 5441 5796;5797 6191 6891 6191 6891 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17560 6191 6891 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17560 6191 6891 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17560 P24928 1878 P24928 P24928 DNA-directed RNA polymerase II subunit RPB1 POLR2A sp|P24928|RPB1_HUMAN DNA-directed RNA polymerase II subunit RPB1 OS=Homo sapiens GN=POLR2A PE=1 SV=2 0.645162 5.26128 0.00175275 96.956 76.003 96.956 1 S TSPKYSPTSPKYSPTSPTYSPTTPKYSPTSP X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXXPPPPPPPPPPPPPPXXXXXX YS(0.014)PT(0.192)S(0.645)PT(0.148)YSPTTPK Y(-39.54)S(-16.55)PT(-5.26)S(5.26)PT(-6.4)Y(-31.91)S(-44.78)PT(-76.52)T(-79.97)PK 5 3 -0.13737 18213 0 0 15615 0 0 19363 0 0 15880 0 0 15439 0 0 19282 0 0 14832 0 0 18581 0 0 17237 0 0 5594.8 0 0 17238 0 0 14753 0 0 19382 0 0 16343 0 0 15893 0 0 19177 0 0 15193 0 0 18834 0 0 16906 0 0 5698.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 101920000 101920000 0 0 NaN 783 470 1878 1878 5442 5798 6192 6892 6192 6892 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13656 6192 6892 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13656 6192 6892 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13656 P24928 1845 P24928 P24928 DNA-directed RNA polymerase II subunit RPB1 POLR2A sp|P24928|RPB1_HUMAN DNA-directed RNA polymerase II subunit RPB1 OS=Homo sapiens GN=POLR2A PE=1 SV=2 0.784553 7.04162 2.61402E-08 167.88 145.63 167.88 1 S PSYSPASPKYTPTSPSYSPSSPEYTPTSPKY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPPPX YT(0.005)PT(0.031)S(0.155)PS(0.785)YS(0.024)PS(0.001)SPEYTPTSPK Y(-96.99)T(-22.08)PT(-14.01)S(-7.04)PS(7.04)Y(-65.21)S(-15.23)PS(-29.98)S(-51.68)PEY(-109.32)T(-106.36)PT(-127.26)S(-132.21)PK 7 3 0.028466 21145 0 0 20899 0 0 24778 0 0 18904 0 0 18893 0 0 27083 0 0 23351 0 0 25930 0 0 22329 0 0 29746 0 0 20023 0 0 19731 0 0 24678 0 0 19663 0 0 19582 0 0 26823 0 0 23527 0 0 26950 0 0 22075 0 0 28609 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 32473000 32473000 0 0 NaN 784 470 1845 1845 5451 5807 6201 6902;6903 6201 6903 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15192 6201 6903 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15192 6201 6903 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15192 P25054 2671 P25054 P25054 Adenomatous polyposis coli protein APC sp|P25054|APC_HUMAN Adenomatous polyposis coli protein OS=Homo sapiens GN=APC PE=1 SV=2 0.653909 2.79897 1.22053E-07 153.82 119.73 153.82 1 S DVWVRIEDCPINNPRSGRSPTGNTPPVIDSV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.654)GRS(0.343)PT(0.003)GNTPPVIDSVSEK S(2.8)GRS(-2.8)PT(-24.1)GNT(-33.55)PPVIDS(-103.96)VS(-128.95)EK 1 3 0.39989 10479 0 0 13509 0 0 12493 0 0 14223 0 0 8794.9 0 0 10305 0 0 9547.2 0 0 12238 0 0 15986 0 0 11917 0 0 9923 0 0 12766 0 0 12420 0 0 14497 0 0 9160.1 0 0 10551 0 0 9858.4 0 0 12560 0 0 15500 0 0 11505 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12637000 12637000 0 0 NaN 785 472 2671 2671 3799 4047 4316 4795 4316 4795 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13774 4316 4795 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13774 4316 4795 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13774 P25054 1042 P25054 P25054 Adenomatous polyposis coli protein APC sp|P25054|APC_HUMAN Adenomatous polyposis coli protein OS=Homo sapiens GN=APC PE=1 SV=2 0.978897 17.2857 7.65439E-08 164.69 133.42 164.69 1 S YSLKYSDEQLNSGRQSPSQNERWARPKHIIE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPXXXXXXXXX YSDEQLNS(0.003)GRQS(0.979)PS(0.018)QNER Y(-125.31)S(-100.97)DEQLNS(-25.41)GRQS(17.29)PS(-17.29)QNER 12 3 -1.0183 8565.7 0 0 11819 0 0 9733.4 0 0 11084 0 0 10610 0 0 9152.1 0 0 9448.8 0 0 11181 0 0 12254 0 0 3203.4 0 0 8109.8 0 0 11160 0 0 9742.3 0 0 11395 0 0 10702 0 0 9291.3 0 0 9750.7 0 0 11233 0 0 11972 0 0 3275.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18360000 18360000 0 0 NaN 786 472 1042 1042 5422 5775 6165 6861 6165 6861 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7710 6165 6861 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7710 6165 6861 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7710 P25098 670 P25098 P25098 Beta-adrenergic receptor kinase 1 ADRBK1 sp|P25098|ARBK1_HUMAN Beta-adrenergic receptor kinase 1 OS=Homo sapiens GN=ADRBK1 PE=1 SV=2 1 64.8383 4.9752E-08 171.44 121.29 171.44 1 S QQLVQRVPKMKNKPRSPVVELSKVPLVQRGS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX NKPRS(1)PVVELSK NKPRS(64.84)PVVELS(-64.84)K 5 4 0.063283 51095 0 0 24877 0 0 54710 0 0 23709 0 0 51846 0 0 53432 0 0 54028 0 0 42894 0 0 26069 0 0 8574.4 0 0 48362 0 0 23494 0 0 54851 0 0 24892 0 0 52787 0 0 52115 0 0 54125 0 0 43692 0 0 26909 0 0 9066.6 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 120790000 120790000 0 0 NaN 787 473 670 670 2840;4212 3010;4489 3224;4783 3579;5309 3224 3579 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12166 3224 3579 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12166 3224 3579 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12166 P25205 728 P25205 P25205 DNA replication licensing factor MCM3 MCM3 sp|P25205|MCM3_HUMAN DNA replication licensing factor MCM3 OS=Homo sapiens GN=MCM3 PE=1 SV=3 0.999815 37.6748 2.65098E-05 146.79 89.52 146.79 1 S TEEEMPQVHTPKTADSQETKESQKVELSESR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX TADS(1)QETK T(-48.53)ADS(37.67)QET(-37.67)K 4 2 1.6314 22792 0 0 26890 0 0 25430 0 0 20861 0 0 62874 0 0 24961 0 0 66318 0 0 37656 0 0 25958 0 0 10090 0 0 21577 0 0 25367 0 0 25919 0 0 21853 0 0 61605 0 0 25015 0 0 66236 0 0 37584 0 0 27325 0 0 10372 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30989000 30989000 0 0 NaN 788 474 728 728 4606 4912 5232 5810 5232 5810 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6571 5232 5810 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6571 5232 5810 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6571 P25788 250 P25788 P25788 Proteasome subunit alpha type-3 PSMA3 sp|P25788|PSA3_HUMAN Proteasome subunit alpha type-3 OS=Homo sapiens GN=PSMA3 PE=1 SV=2 1 70.387 1.20429E-06 147.24 135.8 147.24 1 S EAEKYAKESLKEEDESDDDNM__________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPXXXXXXXXXX ESLKEEDES(1)DDDNM ES(-70.39)LKEEDES(70.39)DDDNM 9 3 0.40966 237060 0 0 271680 0 0 249780 0 0 278280 0 0 226940 0 0 252480 0 0 244920 0 0 269850 0 0 294060 0 0 122390 0 0 224370 0 0 256690 0 0 250530 0 0 284920 0 0 231950 0 0 254670 0 0 249790 0 0 273700 0 0 288060 0 0 121490 0 0 15 0 0 15 0 0 15 0 0 15 0 0 15 0 0 15 0 0 15 0 0 15 0 0 15 0 0 15 0 0 198830000 198830000 0 0 NaN 789 477 250 250 1157 1217;1218 1309;1310;1311;1312;1313;1314;1315 1440;1441;1442;1443;1444;1445;1446;1447;1448;1449;1450;1451;1452;1453;1454 1312 1444 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11331 1312 1444 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11331 1312 1444 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11331 P26038 576 P26038 P26038 Moesin MSN sp|P26038|MOES_HUMAN Moesin OS=Homo sapiens GN=MSN PE=1 SV=3 1 112.845 0.000431557 112.85 94.268 112.85 1 S QIRQGNTKQRIDEFESM______________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPXXXXXXXXXXXXXX QRIDEFES(1)M QRIDEFES(112.85)M 8 2 -0.39606 42754 0 0 30242 0 0 40490 0 0 31026 0 0 79976 0 0 44154 0 0 82696 0 0 50847 0 0 33926 0 0 32188 0 0 40448 0 0 28573 0 0 41390 0 0 32019 0 0 78821 0 0 43817 0 0 82712 0 0 51714 0 0 35543 0 0 31485 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 54931000 54931000 0 0 NaN 790 478 576 576 1787;3124 1886;3314;3315 2033;3544;3545 2265;3928;3929 3545 3929 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15700 3545 3929 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15700 3545 3929 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15700 P26358 953 P26358 P26358 DNA (cytosine-5)-methyltransferase 1 DNMT1 sp|P26358|DNMT1_HUMAN DNA (cytosine-5)-methyltransferase 1 OS=Homo sapiens GN=DNMT1 PE=1 SV=2 0.5 0 0.0146336 72.152 36.714 72.152 1 S GVYLPPEAFTFNIKLSSPVKRPRKEPVDEDL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPXXXXXXXX LS(0.5)S(0.5)PVKRPR LS(0)S(0)PVKRPR 2 3 -0.088905 80131 0 0 38434 0 0 89552 0 0 39333 0 0 42070 0 0 77927 0 0 44231 0 0 59718 0 0 50612 0 0 4230.9 0 0 75860 0 0 36313 0 0 89055 0 0 40952 0 0 45533 0 0 76168 0 0 45094 0 0 60735 0 0 49668 0 0 5366 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 131050000 131050000 0 0 NaN 791 479 953 953 2596 2742 2941 3275 2941 3275 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8579 2941 3275 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8579 2941 3275 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8579 P26358 954 P26358 P26358 DNA (cytosine-5)-methyltransferase 1 DNMT1 sp|P26358|DNMT1_HUMAN DNA (cytosine-5)-methyltransferase 1 OS=Homo sapiens GN=DNMT1 PE=1 SV=2 0.5 0 0.0146336 72.152 36.714 72.152 1 S VYLPPEAFTFNIKLSSPVKRPRKEPVDEDLY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LS(0.5)S(0.5)PVKRPR LS(0)S(0)PVKRPR 3 3 -0.088905 80131 0 0 38434 0 0 89552 0 0 39333 0 0 42070 0 0 77927 0 0 44231 0 0 59718 0 0 50612 0 0 4230.9 0 0 75860 0 0 36313 0 0 89055 0 0 40952 0 0 45533 0 0 76168 0 0 45094 0 0 60735 0 0 49668 0 0 5366 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 131050000 131050000 0 0 NaN 792 479 954 954 2596 2742 2941 3275 2941 3275 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8579 2941 3275 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8579 2941 3275 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8579 P26358 154 P26358 P26358 DNA (cytosine-5)-methyltransferase 1 DNMT1 sp|P26358|DNMT1_HUMAN DNA (cytosine-5)-methyltransferase 1 OS=Homo sapiens GN=DNMT1 PE=1 SV=2 0.956905 13.4646 0.00641418 83.666 68.245 81.884 1 S RRSKSDGEAKPEPSPSPRITRKSTRQTTITS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPXXXXXXXXXXXXX SKSDGEAKPEPS(0.043)PS(0.957)PR S(-62.63)KS(-58.23)DGEAKPEPS(-13.46)PS(13.46)PR 14 4 -0.43489 25368 0 0 23770 0 0 26913 0 0 23041 0 0 29046 0 0 27310 0 0 30887 0 0 28191 0 0 24468 0 0 6188.9 0 0 24011 0 0 22451 0 0 27041 0 0 23771 0 0 29370 0 0 27207 0 0 31176 0 0 28430 0 0 24414 0 0 6480 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 88031000 88031000 0 0 NaN 793 479 154 154 3658;3897 3891;4152 4150;4431 4613;4925 4431 4925 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7503 4150 4613 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7412 4150 4613 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7412 P26358 127 P26358 P26358 DNA (cytosine-5)-methyltransferase 1 DNMT1 sp|P26358|DNMT1_HUMAN DNA (cytosine-5)-methyltransferase 1 OS=Homo sapiens GN=DNMT1 PE=1 SV=2 0.996797 24.93 0.0130532 66.045 46.206 66.045 1 S QARSEARRVGMADANSPPKPLSKPRTPRRSK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPXXXXXX VGMADANS(0.997)PPKPLS(0.003)KPR VGMADANS(24.93)PPKPLS(-24.93)KPR 8 4 -0.19817 10748 0 0 7722.3 0 0 9962.2 0 0 8621.3 0 0 6869.2 0 0 10900 0 0 8101.3 0 0 6777.4 0 0 8759.8 0 0 4688 0 0 10167 0 0 7300.1 0 0 10041 0 0 8833.8 0 0 7171.5 0 0 10781 0 0 8205.3 0 0 7099.3 0 0 8615.3 0 0 4571.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12732000 12732000 0 0 NaN 794 479 127 127 5116 5453 5808 6459 5808 6459 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13743 5808 6459 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13743 5808 6459 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13743 P26368 79 P26368 P26368 Splicing factor U2AF 65 kDa subunit U2AF2 sp|P26368|U2AF2_HUMAN Splicing factor U2AF 65 kDa subunit OS=Homo sapiens GN=U2AF2 PE=1 SV=4 1 144.716 7.45508E-07 144.72 120.87 144.72 1 S PLTRGAKEEHGGLIRSPRHEKKKKVRKYWDV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPXXXXXXXXXXXXX GAKEEHGGLIRS(1)PR GAKEEHGGLIRS(144.72)PR 12 4 0.066368 72899 0 0 78032 0 0 73498 0 0 78916 0 0 71626 0 0 72085 0 0 78477 0 0 73923 0 0 73852 0 0 14564 0 0 68983 0 0 73720 0 0 73964 0 0 80865 0 0 72889 0 0 72610 0 0 79427 0 0 74517 0 0 72636 0 0 15425 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 2 0 0 3 0 0 1158900000 1158900000 0 0 NaN 795 480 79 79 925;1364 979;1438 1062;1546 1172;1173;1709 1546 1709 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7563 1546 1709 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7563 1546 1709 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7563 P26368 2 P26368 P26368 Splicing factor U2AF 65 kDa subunit U2AF2 sp|P26368|U2AF2_HUMAN Splicing factor U2AF 65 kDa subunit OS=Homo sapiens GN=U2AF2 PE=1 SV=4 1 85.0639 1.41232E-06 98.997 94.64 85.064 1 S ______________MSDFDEFERQLNENKQE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX S(1)DFDEFER S(85.06)DFDEFER 1 2 1.3134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 796 480 2 2 3657 3890 4145;4146;4147;4148;4149 4608;4609;4610;4611;4612 4149 4612 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17729 4146 4609 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17098 4146 4609 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17098 P26373 106 P26373 P26373 60S ribosomal protein L13 RPL13 sp|P26373|RL13_HUMAN 60S ribosomal protein L13 OS=Homo sapiens GN=RPL13 PE=1 SV=4 0.975826 16.1692 1.36894E-05 135.79 108.07 135.79 1 S ARTIGISVDPRRRNKSTESLQANVQRLKEYR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX NKS(0.976)T(0.024)ES(0.001)LQANVQR NKS(16.17)T(-16.17)ES(-32.12)LQANVQR 3 3 0.076702 14379 0 0 19296 0 0 13671 0 0 20539 0 0 18738 0 0 13763 0 0 19297 0 0 18087 0 0 20750 0 0 7247.2 0 0 13604 0 0 18236 0 0 13870 0 0 20904 0 0 18725 0 0 14166 0 0 19656 0 0 18193 0 0 20413 0 0 7242.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27738000 27738000 0 0 NaN 797 481 106 106 2841 3011 3225 3580 3225 3580 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9191 3225 3580 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9191 3225 3580 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9191 P26599 141 P26599 P26599 Polypyrimidine tract-binding protein 1 PTBP1 sp|P26599|PTBP1_HUMAN Polypyrimidine tract-binding protein 1 OS=Homo sapiens GN=PTBP1 PE=1 SV=1 0.794031 5.90381 4.71433E-06 139.32 96.041 139.32 1 S IYIQFSNHKELKTDSSPNQARAQAALQAVNS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX T(0.002)DS(0.204)S(0.794)PNQAR T(-25.88)DS(-5.9)S(5.9)PNQAR 4 2 -0.63132 28652 0 0 33923 0 0 29998 0 0 34809 0 0 30630 0 0 27574 0 0 31724 0 0 29754 0 0 36148 0 0 3798.6 0 0 27117 0 0 32051 0 0 30139 0 0 35570 0 0 31066 0 0 27996 0 0 32361 0 0 29875 0 0 35480 0 0 4265.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 213630000 213630000 0 0 NaN 798 483 141 141 1039;4669 1095;4980 1183;5304 1302;5893 5304 5893 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4972 5304 5893 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4972 5304 5893 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4972 P27707 11 P27707 P27707 Deoxycytidine kinase DCK sp|P27707|DCK_HUMAN Deoxycytidine kinase OS=Homo sapiens GN=DCK PE=1 SV=1 0.993984 23.2697 1.39104E-16 246.73 197.29 246.73 1 S _____MATPPKRSCPSFSASSEGTRIKKISI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX S(0.001)CPS(0.994)FS(0.005)ASSEGTR S(-28.72)CPS(23.27)FS(-23.27)AS(-59.8)S(-79.7)EGT(-122.3)R 4 2 -0.12127 16562 0 0 8249.2 0 0 18044 0 0 8198 0 0 31814 0 0 18024 0 0 27899 0 0 20312 0 0 7585 0 0 4856.1 0 0 15677 0 0 7792.5 0 0 18245 0 0 8578.5 0 0 31398 0 0 17666 0 0 28031 0 0 20432 0 0 8345.7 0 0 5042.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16089000 16089000 0 0 NaN 799 488 11 11 3644 3874 4128 4587 4128 4587 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9368 4128 4587 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9368 4128 4587 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9368 P27707 74 P27707 P27707 Deoxycytidine kinase DCK sp|P27707|DCK_HUMAN Deoxycytidine kinase OS=Homo sapiens GN=DCK PE=1 SV=1 0.909157 10.0036 5.26094E-05 111.67 95.973 111.67 1 S CNVQSTQDEFEELTMSQKNGGNVLQMMYEKP X;X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX WCNVQSTQDEFEELT(0.091)MS(0.909)QK WCNVQS(-63.62)T(-55.81)QDEFEELT(-10)MS(10)QK 17 3 -0.71323 3415.3 0 0 2638.4 0 0 4273.6 0 0 2901.2 0 0 4517.8 0 0 3487.3 0 0 5047.4 0 0 4598 0 0 2711.4 0 0 21556 0 0 3235 0 0 2493.9 0 0 4257.9 0 0 2972.2 0 0 4575.6 0 0 3523.8 0 0 5048.4 0 0 5218.6 0 0 2774.4 0 0 20404 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6650000 6650000 0 0 NaN 800 488 74 74 5330 5678 6054 6728 6054 6728 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20745 6054 6728 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20745 6054 6728 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20745 P27708 1859 P27708 P27708 CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase CAD sp|P27708|PYR1_HUMAN CAD protein OS=Homo sapiens GN=CAD PE=1 SV=3 1 159.265 3.58068E-07 159.26 123.07 159.26 1 S LPDGRFHLPPRIHRASDPGLPAEEPKEKSSR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPXXX IHRAS(1)DPGLPAEEPK IHRAS(159.26)DPGLPAEEPK 5 3 -0.51319 107090 0 0 120670 0 0 110970 0 0 124390 0 0 143310 0 0 111080 0 0 146510 0 0 126640 0 0 137580 0 0 65599 0 0 101350 0 0 114010 0 0 111920 0 0 127280 0 0 143550 0 0 112250 0 0 148730 0 0 128400 0 0 136130 0 0 64700 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 94824000 94824000 0 0 NaN 801 489 1859 1859 442;443;1853 471;472;1957 506;507;2114 567;568;2369;2370;2371 2114 2371 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10949 2114 2371 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10949 2114 2371 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10949 P27708 1406 P27708 P27708 CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase CAD sp|P27708|PYR1_HUMAN CAD protein OS=Homo sapiens GN=CAD PE=1 SV=3 0.856843 7.77119 0.000995017 123.6 15.449 123.6 1 S LVINLSMRGAGGRRLSSFVTKGYRTRRLAAD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX LS(0.857)S(0.143)FVTK LS(7.77)S(-7.77)FVT(-49.11)K 2 2 0.732 23692 0 0 20463 0 0 24786 0 0 17990 0 0 104390 0 0 22644 0 0 105430 0 0 47893 0 0 19340 0 0 21858 0 0 22422 0 0 19317 0 0 25871 0 0 18697 0 0 101170 0 0 22848 0 0 104920 0 0 47720 0 0 22734 0 0 21690 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 80001000 80001000 0 0 NaN 802 489 1406 1406 2589;3345 2735;3547 2934;3785 3268;4203 2934 3268 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20541 2934 3268 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20541 2934 3268 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20541 P27708 1407 P27708 P27708 CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase CAD sp|P27708|PYR1_HUMAN CAD protein OS=Homo sapiens GN=CAD PE=1 SV=3 0.977797 16.4388 0.00147 107.79 49.314 74.611 1 S VINLSMRGAGGRRLSSFVTKGYRTRRLAADF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX RLS(0.022)S(0.978)FVTK RLS(-16.44)S(16.44)FVT(-58.04)K 4 3 -0.28515 37522 0 0 32588 0 0 40752 0 0 30654 0 0 74467 0 0 35402 0 0 74971 0 0 46746 0 0 34985 0 0 21057 0 0 35518 0 0 30774 0 0 41263 0 0 31669 0 0 73548 0 0 35455 0 0 75195 0 0 47085 0 0 36216 0 0 20909 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 83044000 83044000 0 0 NaN 803 489 1407 1407 2589;3345 2735;3547 2933;3784;3785 3267;4202;4203 3784 4202 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16113 3785 4203 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16446 3785 4203 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16446 P27816 358 P27816 P27816 Microtubule-associated protein 4 MAP4 sp|P27816|MAP4_HUMAN Microtubule-associated protein 4 OS=Homo sapiens GN=MAP4 PE=1 SV=3 1 66.6847 0.000113955 106.63 80.483 103.13 1 S APAKDVTLLKETERASPIKMDLAPSKDMGPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPXXXXX AS(1)PIKMDLAPSK AS(66.68)PIKMDLAPS(-66.68)K 2 3 -0.61678 43775 0 0 87408 0 0 46211 0 0 90836 0 0 46410 0 0 51328 0 0 48845 0 0 65611 0 0 97246 0 0 18543 0 0 41432 0 0 82591 0 0 46399 0 0 92424 0 0 47165 0 0 53426 0 0 50929 0 0 65818 0 0 93899 0 0 18979 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 222780000 222780000 0 0 NaN 804 491 358 358 482;1183;2048 513;1244;2167 552;1342;2334 616;1486;2601 552 616 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16702 1342 1486 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14584 1342 1486 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14584 P27816 787 P27816 P27816 Microtubule-associated protein 4 MAP4 sp|P27816|MAP4_HUMAN Microtubule-associated protein 4 OS=Homo sapiens GN=MAP4 PE=1 SV=3 0.995728 23.6781 2.58307E-07 161.08 127.93 131.31 1 S KPKPIADAKAPEKRASPSKPASAPASRSGSK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX RAS(0.996)PS(0.004)KPASAPASR RAS(23.68)PS(-23.68)KPAS(-54.55)APAS(-84.79)R 3 3 -0.88161 47486 0 0 89015 0 0 49095 0 0 88570 0 0 37401 0 0 50362 0 0 38335 0 0 64675 0 0 98395 0 0 4424 0 0 44940 0 0 84087 0 0 49202 0 0 90354 0 0 38715 0 0 52374 0 0 40622 0 0 64452 0 0 94539 0 0 5662.5 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 159230000 159230000 0 0 NaN 805 491 787 787 485;3195 516;3389 555;3622 619;4018 3622 4018 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5924 555 619 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6883 555 619 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6883 P27816 280 P27816 P27816 Microtubule-associated protein 4 MAP4 sp|P27816|MAP4_HUMAN Microtubule-associated protein 4 OS=Homo sapiens GN=MAP4 PE=1 SV=3 0.901781 9.62904 5.92921E-07 150.7 123.05 150.7 1 S ALATKTEVALAKDMESPTKLDVTLAKDMQPS X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX DMES(0.902)PT(0.098)KLDVTLAK DMES(9.63)PT(-9.63)KLDVT(-79.92)LAK 4 3 -0.69357 90872 0 0 133200 0 0 94298 0 0 140990 0 0 75491 0 0 96492 0 0 81600 0 0 109610 0 0 151800 0 0 60551 0 0 86001 0 0 125880 0 0 94537 0 0 143570 0 0 77872 0 0 98983 0 0 84691 0 0 111270 0 0 146810 0 0 59553 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 355730000 355730000 0 0 NaN 806 491 280 280 756;757 800;801;802 851;852;853 939;940;941 853 941 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18612 853 941 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18612 853 941 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18612 P27816 507 P27816 P27816 Microtubule-associated protein 4 MAP4 sp|P27816|MAP4_HUMAN Microtubule-associated protein 4 OS=Homo sapiens GN=MAP4 PE=1 SV=3 0.980919 17.1103 8.87071E-11 197.17 173.72 197.17 1 S VAPSTVKEVGLLKDMSPLSETEMALGKDVTP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX DMS(0.981)PLS(0.019)ETEMALGK DMS(17.11)PLS(-17.11)ET(-89.49)EMALGK 3 3 -0.28162 5089 0 0 9672.3 0 0 4905.3 0 0 8239.3 0 0 5050.9 0 0 5567.3 0 0 6160.5 0 0 7085.8 0 0 9548.5 0 0 10624 0 0 4814.8 0 0 9128.9 0 0 4953.8 0 0 8504.4 0 0 5135.9 0 0 5738.7 0 0 6310.3 0 0 7368.8 0 0 9277.8 0 0 10168 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11027000 11027000 0 0 NaN 807 491 507 507 758 803 854 942 854 942 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22887 854 942 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22887 854 942 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22887 P27816 636 P27816 P27816 Microtubule-associated protein 4 MAP4 sp|P27816|MAP4_HUMAN Microtubule-associated protein 4 OS=Homo sapiens GN=MAP4 PE=1 SV=3 0.999296 31.5203 2.81428E-11 208.92 155.75 208.92 1 S FMISPETVTGTGKKCSLPAEEDSVLEKLGER X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX KCS(0.999)LPAEEDS(0.001)VLEK KCS(31.52)LPAEEDS(-31.52)VLEK 3 3 0.82561 23498 0 0 47922 0 0 24988 0 0 48303 0 0 49159 0 0 22965 0 0 53025 0 0 46635 0 0 54213 0 0 13572 0 0 22241 0 0 45272 0 0 25379 0 0 49165 0 0 48515 0 0 24472 0 0 53822 0 0 46270 0 0 53442 0 0 13859 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 48362000 48362000 0 0 NaN 808 491 636 636 2024 2142 2308 2575 2308 2575 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16153 2308 2575 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16153 2308 2575 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16153 P27816 928 P27816 P27816 Microtubule-associated protein 4 MAP4 sp|P27816|MAP4_HUMAN Microtubule-associated protein 4 OS=Homo sapiens GN=MAP4 PE=1 SV=3 0.860921 7.9246 2.65076E-10 198.16 155.36 198.16 1 S PSSTTPRLSRLATNTSAPDLKNVRSKVGSTE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX LATNT(0.139)S(0.861)APDLK LAT(-35.5)NT(-7.92)S(7.92)APDLK 6 2 0.28869 53036 0 0 93585 0 0 49640 0 0 87909 0 0 57350 0 0 49126 0 0 57848 0 0 67045 0 0 97450 0 0 18028 0 0 50173 0 0 88374 0 0 50275 0 0 89986 0 0 57788 0 0 51231 0 0 59945 0 0 67099 0 0 94475 0 0 18527 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 226280000 226280000 0 0 NaN 809 491 928 928 2302 2431 2620 2928 2620 2928 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15105 2620 2928 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15105 2620 2928 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15105 P27816 941 P27816 P27816 Microtubule-associated protein 4 MAP4 sp|P27816|MAP4_HUMAN Microtubule-associated protein 4 OS=Homo sapiens GN=MAP4 PE=1 SV=3 0.84566 7.38717 2.74513E-05 145.75 101.44 145.75 1 S NTSAPDLKNVRSKVGSTENIKHQPGGGRAKV X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX VGS(0.846)T(0.154)ENIK VGS(7.39)T(-7.39)ENIK 3 2 -1.1111 87059 0 0 130410 0 0 91968 0 0 124770 0 0 117670 0 0 89577 0 0 107970 0 0 111770 0 0 147530 0 0 11286 0 0 82398 0 0 123160 0 0 92621 0 0 127890 0 0 117800 0 0 91658 0 0 111450 0 0 111590 0 0 143890 0 0 13214 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 121700000 121700000 0 0 NaN 810 491 941 941 3916;5127 4174;5464 4455;5820 4953;6471 5820 6471 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11589 5820 6471 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11589 5820 6471 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11589 P27816 825 P27816 P27816 Microtubule-associated protein 4 MAP4 sp|P27816|MAP4_HUMAN Microtubule-associated protein 4 OS=Homo sapiens GN=MAP4 PE=1 SV=3 0.844036 7.47159 5.41667E-08 149.29 114.6 95.608 1 S TTTAAAVASTGPSSRSPSTLLPKKPTAIKTE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPXXXXXXXX S(0.844)PS(0.151)T(0.005)LLPK S(7.47)PS(-7.47)T(-22.37)LLPK 1 3 0.11781 8018.9 0 0 16969 0 0 7458.5 0 0 17475 0 0 7161 0 0 7790.6 0 0 6852.8 0 0 11031 0 0 17214 0 0 1015.5 0 0 7585.8 0 0 16033 0 0 7538.3 0 0 17757 0 0 7290 0 0 8283.7 0 0 7274.1 0 0 10970 0 0 16546 0 0 1211.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23224000 23224000 0 0 NaN 811 491 825 825 4198;4992 4474;5321 4768 5293 4768 5293 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17012 5669 6298 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15751 5669 6298 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15751 P27816 868 P27816 P27816 Microtubule-associated protein 4 MAP4 sp|P27816|MAP4_HUMAN Microtubule-associated protein 4 OS=Homo sapiens GN=MAP4 PE=1 SV=3 0.970031 15.3139 0.000354888 110.93 66.583 110.93 1 S SVPADLSRPKSTSTSSMKKTTTLSGTAPAAG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX STST(0.001)S(0.029)S(0.97)MKK S(-59.77)T(-45.88)S(-36.4)T(-29.13)S(-15.31)S(15.31)MKK 6 3 -0.60605 42850 0 0 68310 0 0 42263 0 0 66183 0 0 39049 0 0 42127 0 0 44693 0 0 52697 0 0 73880 0 0 1994.8 0 0 40545 0 0 64518 0 0 42561 0 0 67698 0 0 39924 0 0 43436 0 0 46022 0 0 52510 0 0 71660 0 0 3097.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 124970000 124970000 0 0 NaN 812 491 868 868 4535 4836 5153 5722 5153 5722 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8119 5153 5722 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8119 5153 5722 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8119 P27816 1073 P27816 P27816 Microtubule-associated protein 4 MAP4 sp|P27816|MAP4_HUMAN Microtubule-associated protein 4 OS=Homo sapiens GN=MAP4 PE=1 SV=3 1 89.8161 1.13479E-07 166.01 140.69 89.816 1 S SQKLNFKEKAQAKVGSLDNVGHLPAGGAVKT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX VGS(1)LDNVGHLPAGGAVK VGS(89.82)LDNVGHLPAGGAVK 3 3 -0.27129 18386 0 0 25671 0 0 18202 0 0 24444 0 0 31114 0 0 18456 0 0 32667 0 0 26451 0 0 25773 0 0 17013 0 0 17398 0 0 24244 0 0 18500 0 0 25077 0 0 30828 0 0 18899 0 0 32989 0 0 26735 0 0 25722 0 0 16632 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 85621000 85621000 0 0 NaN 813 491 1073 1073 5120 5457 5812;5813 6463;6464 5813 6464 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17006 5812 6463 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16735 5812 6463 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16735 P27824 583 P27824 P27824 Calnexin CANX sp|P27824|CALX_HUMAN Calnexin OS=Homo sapiens GN=CANX PE=1 SV=2 1 208.433 1.04094E-11 208.43 182.84 208.43 1 S EDRKPKAEEDEILNRSPRNRKPRRE______ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX AEEDEILNRS(1)PR AEEDEILNRS(208.43)PR 10 3 -0.14183 122310 0 0 130030 0 0 116650 0 0 131600 0 0 165550 0 0 123230 0 0 156370 0 0 136970 0 0 136550 0 0 16593 0 0 115710 0 0 122840 0 0 118370 0 0 134890 0 0 164970 0 0 124100 0 0 159070 0 0 137360 0 0 135570 0 0 18795 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 17438000000 17438000000 0 0 NaN 814 492 583 583 131 137 147;148 162;163;164;165;166;167 148 163 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10875 148 163 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10875 148 163 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10875 P27824 554 P27824 P27824 Calnexin CANX sp|P27824|CALX_HUMAN Calnexin OS=Homo sapiens GN=CANX PE=1 SV=2 0.999916 40.7386 2.9584E-23 277.38 255.54 277.38 1 S DEEEEGEEKLEEKQKSDAEEDGGTVSQEEED X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP QKS(1)DAEEDGGTVSQEEEDR QKS(40.74)DAEEDGGT(-40.74)VS(-78.82)QEEEDR 3 3 0.5396 25066 0 0 24729 0 0 27501 0 0 23382 0 0 28399 0 0 26194 0 0 27654 0 0 29443 0 0 26989 0 0 5198.8 0 0 23728 0 0 23353 0 0 27561 0 0 24135 0 0 28756 0 0 26181 0 0 28167 0 0 29565 0 0 26658 0 0 5576.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 38130000 38130000 0 0 NaN 815 492 554 554 3055 3241 3468 3842 3468 3842 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7961 3468 3842 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7961 3468 3842 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7961 P27824 564 P27824 P27824 Calnexin CANX sp|P27824|CALX_HUMAN Calnexin OS=Homo sapiens GN=CANX PE=1 SV=2 0.997824 26.6149 3.91158E-08 168.92 150.41 168.92 1 S EEKQKSDAEEDGGTVSQEEEDRKPKAEEDEI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPXXXXXXXXX QKSDAEEDGGT(0.002)VS(0.998)QEEEDR QKS(-110.5)DAEEDGGT(-26.61)VS(26.61)QEEEDR 13 3 0.098386 8577 0 0 10006 0 0 9506 0 0 8896.9 0 0 11335 0 0 8541.9 0 0 12740 0 0 10431 0 0 12734 0 0 2522.9 0 0 8119.5 0 0 9446.3 0 0 9543.7 0 0 9197.1 0 0 11415 0 0 8606.3 0 0 12900 0 0 10466 0 0 12564 0 0 2617 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11576000 11576000 0 0 NaN 816 492 564 564 3055 3241 3467 3841 3467 3841 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7581 3467 3841 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7581 3467 3841 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7581 P28066 16 P28066 P28066 Proteasome subunit alpha type-5 PSMA5 sp|P28066|PSA5_HUMAN Proteasome subunit alpha type-5 OS=Homo sapiens GN=PSMA5 PE=1 SV=3 0.991984 20.9257 0.00431034 93.772 72.026 93.772 1 S MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX GVNT(0.008)FS(0.992)PEGR GVNT(-20.93)FS(20.93)PEGR 6 2 -1.9232 24708 0 0 33893 0 0 22207 0 0 34633 0 0 22614 0 0 25753 0 0 20569 0 0 28231 0 0 37762 0 0 8613.4 0 0 23370 0 0 32022 0 0 22506 0 0 35372 0 0 22912 0 0 26257 0 0 21507 0 0 28481 0 0 36530 0 0 8763.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 48101000 48101000 0 0 NaN 817 493 16 16 1673 1765 1907 2125 1907 2125 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11098 1907 2125 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11098 1907 2125 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11098 P28066 56 P28066 P28066 Proteasome subunit alpha type-5 PSMA5 sp|P28066|PSA5_HUMAN Proteasome subunit alpha type-5 OS=Homo sapiens GN=PSMA5 PE=1 SV=3 0.99349 21.836 7.85476E-16 228.33 178.05 228.33 1 S QTSEGVCLAVEKRITSPLMEPSSIEKIVEID X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX IT(0.007)S(0.993)PLMEPSSIEK IT(-21.84)S(21.84)PLMEPS(-114.57)S(-121.78)IEK 3 2 1.1676 8809.1 0 0 13162 0 0 10116 0 0 12707 0 0 7623.7 0 0 8796.5 0 0 7815.3 0 0 12122 0 0 12952 0 0 17999 0 0 8340.6 0 0 12431 0 0 10081 0 0 13012 0 0 7891.3 0 0 9067.3 0 0 8086.8 0 0 12573 0 0 12562 0 0 17229 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10887000 10887000 0 0 NaN 818 493 56 56 1969 2081 2245 2507 2245 2507 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19593 2245 2507 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19593 2245 2507 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19593 P28290 739 P28290 P28290 Sperm-specific antigen 2 SSFA2 sp|P28290|SSFA2_HUMAN Sperm-specific antigen 2 OS=Homo sapiens GN=SSFA2 PE=1 SV=3 0.999391 33.7888 3.17852E-16 241.64 155.76 241.64 1 S RYLFAKAGYPLRRSQSLPTTLLSPVRVVSSV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX SQS(0.999)LPTTLLSPVR S(-37.46)QS(33.79)LPT(-33.79)T(-49.33)LLS(-105.43)PVR 3 2 0.43419 8922.2 0 0 14160 0 0 10447 0 0 11542 0 0 17565 0 0 9755.8 0 0 17297 0 0 15000 0 0 13299 0 0 24266 0 0 8448.4 0 0 13361 0 0 10519 0 0 11982 0 0 17398 0 0 9969.9 0 0 17510 0 0 15574 0 0 13292 0 0 23196 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 44357000 44357000 0 0 NaN 819 494 739 739 4241 4519 4816 5346 4816 5346 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20046 4816 5346 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20046 4816 5346 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20046 P28715 526 P28715 P28715 DNA repair protein complementing XP-G cells ERCC5 sp|P28715|ERCC5_HUMAN DNA repair protein complementing XP-G cells OS=Homo sapiens GN=ERCC5 PE=1 SV=3 0.767006 5.95711 4.85116E-05 127.97 110.05 127.97 1 S SDAPGLPNGRELTPASPTCTNSVSKNETHAE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPXXXXXX ELT(0.038)PAS(0.767)PT(0.195)CTNSVSK ELT(-13)PAS(5.96)PT(-5.96)CT(-53.23)NS(-82.87)VS(-104.96)K 6 3 -0.93147 44126 0 0 36113 0 0 47417 0 0 37546 0 0 24796 0 0 45073 0 0 28032 0 0 39205 0 0 38711 0 0 9919.7 0 0 41767 0 0 34123 0 0 47286 0 0 38585 0 0 26554 0 0 44788 0 0 28671 0 0 39851 0 0 37743 0 0 10248 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 67349000 67349000 0 0 NaN 820 495 526 526 1058 1114 1202 1321 1202 1321 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12746 1202 1321 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12746 1202 1321 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12746 P28715 341 P28715 P28715 DNA repair protein complementing XP-G cells ERCC5 sp|P28715|ERCC5_HUMAN DNA repair protein complementing XP-G cells OS=Homo sapiens GN=ERCC5 PE=1 SV=3 0.999999 62.5446 3.86672E-06 140.14 102.59 140.14 1 S CEKLKTEKEPDATPPSPRTLLAMQAALLGSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPXXXXXXXXXXXXX EPDATPPS(1)PR EPDAT(-62.54)PPS(62.54)PR 8 2 0.11954 58764 0 0 36000 0 0 61413 0 0 38679 0 0 43565 0 0 60243 0 0 45264 0 0 49133 0 0 38128 0 0 15234 0 0 55616 0 0 34023 0 0 61472 0 0 39898 0 0 45281 0 0 59312 0 0 45798 0 0 50174 0 0 37923 0 0 15482 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 89985000 89985000 0 0 NaN 821 495 341 341 1084;2423;4685 1142;2561;4996 1230;2755;5321 1353;3077;5913 1230 1353 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7775 1230 1353 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7775 1230 1353 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7775 P28715 1068 P28715 P28715 DNA repair protein complementing XP-G cells ERCC5 sp|P28715|ERCC5_HUMAN DNA repair protein complementing XP-G cells OS=Homo sapiens GN=ERCC5 PE=1 SV=3 0.472168 0 0.0123867 71.842 55.66 71.842 S GKTQKRGITNTLEESSSLKRKRLSDSKGKNT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPXXXXXXXXXXX GITNTLEES(0.056)S(0.472)S(0.472)LKR GIT(-49.41)NT(-45.43)LEES(-9.29)S(0)S(0)LKR 10 3 0.080102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 822 495 1068 1068 1481 1559 1684 1864 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14431 1684 1864 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14431 1684 1864 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14431 P28715 1069 P28715 P28715 DNA repair protein complementing XP-G cells ERCC5 sp|P28715|ERCC5_HUMAN DNA repair protein complementing XP-G cells OS=Homo sapiens GN=ERCC5 PE=1 SV=3 0.472168 0 0.0123867 71.842 55.66 71.842 S KTQKRGITNTLEESSSLKRKRLSDSKGKNTC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GITNTLEES(0.056)S(0.472)S(0.472)LKR GIT(-49.41)NT(-45.43)LEES(-9.29)S(0)S(0)LKR 11 3 0.080102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 823 495 1069 1069 1481 1559 1684 1864 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14431 1684 1864 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14431 1684 1864 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14431 P28715 384 P28715 P28715 DNA repair protein complementing XP-G cells ERCC5 sp|P28715|ERCC5_HUMAN DNA repair protein complementing XP-G cells OS=Homo sapiens GN=ERCC5 PE=1 SV=3 0.999999 59.5287 9.99528E-23 268.77 247.93 268.77 1 S ARGRNAPAAVDEGSISPRTLSAIKRALDDDE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPXXXXXXXXXXXXX NAPAAVDEGSIS(1)PR NAPAAVDEGS(-59.53)IS(59.53)PR 12 2 0.1051 32903 0 0 19175 0 0 34524 0 0 16997 0 0 30537 0 0 33674 0 0 32067 0 0 30910 0 0 20815 0 0 20279 0 0 31141 0 0 18102 0 0 34625 0 0 17853 0 0 31235 0 0 33012 0 0 32260 0 0 31723 0 0 21015 0 0 19811 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 99484000 99484000 0 0 NaN 824 495 384 384 2776 2945 3155 3505 3155 3505 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10567 3155 3505 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10567 3155 3505 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10567 P28749 650 P28749 P28749 Retinoblastoma-like protein 1 RBL1 sp|P28749|RBL1_HUMAN Retinoblastoma-like protein 1 OS=Homo sapiens GN=RBL1 PE=1 SV=3 0.989018 21.3496 1.19295E-09 192.95 108.95 192.95 1 S DMQPLSPISVHERYSSPTAGSAKRRLFGEDP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX YS(0.004)S(0.989)PT(0.007)AGSAK Y(-85.74)S(-24.23)S(21.35)PT(-21.35)AGS(-62.85)AK 3 2 0.26585 35255 0 0 16368 0 0 35288 0 0 15983 0 0 11664 0 0 33148 0 0 12494 0 0 22135 0 0 17051 0 0 4124.6 0 0 33360 0 0 15460 0 0 35243 0 0 16710 0 0 13248 0 0 32330 0 0 12803 0 0 22754 0 0 16631 0 0 4396.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27127000 27127000 0 0 NaN 825 496 650 650 5444 5800 6194 6894 6194 6894 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8911 6194 6894 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8911 6194 6894 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8911 P29374 864 P29374 P29374 AT-rich interactive domain-containing protein 4A ARID4A sp|P29374|ARI4A_HUMAN AT-rich interactive domain-containing protein 4A OS=Homo sapiens GN=ARID4A PE=1 SV=3 0.680012 3.27383 0.00521883 87.447 60.736 87.447 1 S CVKEKKLKRKILGQSSPEKKIRIENGMEMTN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX ILGQS(0.32)S(0.68)PEKK ILGQS(-3.27)S(3.27)PEKK 6 3 0.22132 20795 0 0 15908 0 0 20663 0 0 16573 0 0 16481 0 0 19686 0 0 17230 0 0 17833 0 0 18023 0 0 3439.1 0 0 19677 0 0 15031 0 0 20764 0 0 17026 0 0 16984 0 0 19576 0 0 17524 0 0 18063 0 0 17750 0 0 3651.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 47669000 47669000 0 0 NaN 826 499 864 864 1881 1985 2143 2402 2143 2402 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13412 2143 2402 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13412 2143 2402 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13412 P29375 1331 P29375 P29375 Lysine-specific demethylase 5A KDM5A sp|P29375|KDM5A_HUMAN Lysine-specific demethylase 5A OS=Homo sapiens GN=KDM5A PE=1 SV=3 0.998833 29.3481 3.8725E-06 140.09 125.01 140.09 1 S FQQSAFNRVVSSVSSSPRQTMDYDDEETDSD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX VVSSVSS(0.001)S(0.999)PR VVS(-82.89)S(-71.98)VS(-52.31)S(-29.35)S(29.35)PR 8 2 1.0002 28846 0 0 24150 0 0 29105 0 0 24014 0 0 25238 0 0 31846 0 0 23846 0 0 25817 0 0 28946 0 0 4584.1 0 0 27297 0 0 22813 0 0 29242 0 0 24791 0 0 25825 0 0 31504 0 0 24480 0 0 26268 0 0 28345 0 0 4914 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29384000 29384000 0 0 NaN 827 500 1331 1331 5313 5661 6037 6709 6037 6709 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9152 6037 6709 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9152 6037 6709 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9152 P29590 518 P29590 P29590 Protein PML PML sp|P29590|PML_HUMAN Protein PML OS=Homo sapiens GN=PML PE=1 SV=3 1 99.8814 0.000998603 99.881 82.181 99.881 2 S RSSPEQPRPSTSKAVSPPHLDGPPSPRSPVI X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX AVS(1)PPHLDGPPS(1)PR AVS(99.88)PPHLDGPPS(99.88)PR 3 3 0.12918 0 10861 0 0 8419.1 0 0 9885.4 0 0 8884 0 0 11911 0 0 11779 0 0 13468 0 0 10923 0 0 8964 0 0 4627.9 0 0 10273 0 0 7955.9 0 0 10038 0 0 9140 0 0 11986 0 0 11676 0 0 13511 0 0 11129 0 0 9035.9 0 0 4610.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 41350000 0 41350000 0 NaN 828 501 518 518 568 605;606 647 722 647 722 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13947 647 722 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13947 647 722 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13947 P29590 527 P29590 P29590 Protein PML PML sp|P29590|PML_HUMAN Protein PML OS=Homo sapiens GN=PML PE=1 SV=3 1 99.8814 3.69244E-05 131.48 105.89 99.881 1;2 S STSKAVSPPHLDGPPSPRSPVIGSEVFLPNS X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPXXXXXXXXXXXXX AVS(1)PPHLDGPPS(1)PR AVS(99.88)PPHLDGPPS(99.88)PR 12 3 0.12918 9497.3 10861 0 7802.4 8419.1 0 10643 9885.4 0 5962.9 8884 0 7471 11911 0 10680 11779 0 7861.4 13468 0 8932.7 10923 0 7240 8964 0 2083.7 4627.9 0 8991.1 10273 0 7360.1 7955.9 0 10613 10038 0 6310.6 9140 0 7773.8 11986 0 10477 11676 0 7966.5 13511 0 9090.7 11129 0 7170 9035.9 0 2168.8 4610.5 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 56564000 15214000 41350000 0 NaN 829 501 527 527 568 605;606 646;647 721;722 647 722 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13947 646 721 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12322 646 721 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12322 P29590 480 P29590 P29590 Protein PML PML sp|P29590|PML_HUMAN Protein PML OS=Homo sapiens GN=PML PE=1 SV=3 0.5 0 0.00792543 79.744 61.129 79.744 1 S GEDVSNTTTAQKRKCSQTQCPRKVIKMESEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX KCS(0.5)QT(0.5)QCPR KCS(0)QT(0)QCPR 3 3 2.4911 14186 0 0 6818.9 0 0 13582 0 0 7159.6 0 0 31117 0 0 14646 0 0 29613 0 0 17979 0 0 6083.2 0 0 2802.2 0 0 13421 0 0 6443.5 0 0 13923 0 0 7450.8 0 0 30499 0 0 14394 0 0 29571 0 0 17989 0 0 7000.3 0 0 3054.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29888000 29888000 0 0 NaN 830 501 480 480 2025 2143 2309 2576 2309 2576 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5744 2309 2576 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5744 2309 2576 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5744 P29590 505 P29590 P29590 Protein PML PML sp|P29590|PML_HUMAN Protein PML OS=Homo sapiens GN=PML PE=1 SV=3 0.816078 6.47097 1.16045E-10 177.42 137.38 177.42 1 S KMESEEGKEARLARSSPEQPRPSTSKAVSPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X XXXXXXXXXXXXXXPPPPPPPPPPPPXXXXX S(0.184)S(0.816)PEQPRPSTSK S(-6.47)S(6.47)PEQPRPS(-98.88)T(-98.88)S(-106.72)K 2 2 -0.21926 8354.1 0 0 11136 0 0 7834.5 0 0 9883.1 0 0 27853 0 0 7450.3 0 0 32953 0 0 17233 0 0 9682.4 0 0 1152.3 0 0 7903.2 0 0 10513 0 0 8173.4 0 0 10185 0 0 27133 0 0 7701.2 0 0 32661 0 0 16941 0 0 10541 0 0 1483.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 56918000 56918000 0 0 NaN 831 501 505 505 4378 4664 4968 5513 4968 5513 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6537 4968 5513 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6537 4968 5513 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6537 P29692 133 P29692 P29692 Elongation factor 1-delta EEF1D sp|P29692|EF1D_HUMAN Elongation factor 1-delta OS=Homo sapiens GN=EEF1D PE=1 SV=5 1 76.2306 2.16443E-16 240.39 213.61 240.39 1 S SSPGHRATAPQTQHVSPMRQVEPPAKKPATP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX ATAPQTQHVS(1)PMR AT(-139.7)APQT(-76.23)QHVS(76.23)PMR 10 3 -0.46207 29616 0 0 26803 0 0 28867 0 0 25995 0 0 26237 0 0 29875 0 0 28979 0 0 27813 0 0 29524 0 0 4854.8 0 0 28021 0 0 25315 0 0 29083 0 0 26802 0 0 26820 0 0 29755 0 0 29381 0 0 28124 0 0 29108 0 0 5215 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 4002800000 4002800000 0 0 NaN 832 503 133 133 518 550;551 590;591 657;658 591 658 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7720 591 658 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7720 591 658 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7720 P29966 27 P29966 P29966 Myristoylated alanine-rich C-kinase substrate MARCKS sp|P29966|MARCS_HUMAN Myristoylated alanine-rich C-kinase substrate OS=Homo sapiens GN=MARCKS PE=1 SV=4 0.701245 3.99283 0.00535844 86.909 60.992 86.909 1 S GEAAAERPGEAAVASSPSKANGQENGHVKVN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX GEAAAERPGEAAVAS(0.019)S(0.701)PS(0.28)K GEAAAERPGEAAVAS(-15.64)S(3.99)PS(-3.99)K 16 3 -0.9027 11864 0 0 13643 0 0 14114 0 0 11930 0 0 31250 0 0 14710 0 0 31946 0 0 19573 0 0 13974 0 0 14052 0 0 11235 0 0 12878 0 0 14294 0 0 12398 0 0 30694 0 0 14708 0 0 31993 0 0 19868 0 0 14550 0 0 13685 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12628000 12628000 0 0 NaN 833 504 27 27 1400 1476 1585 1751 1585 1751 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8800 1585 1751 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8800 1585 1751 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8800 P29966 170 P29966 P29966 Myristoylated alanine-rich C-kinase substrate MARCKS sp|P29966|MARCS_HUMAN Myristoylated alanine-rich C-kinase substrate OS=Homo sapiens GN=MARCKS PE=1 SV=4 0.999995 53.3133 0.000826374 110.66 67.149 110.66 1 S KKRFSFKKSFKLSGFSFKKNKKEAGEGGEAE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX LSGFS(1)FKK LS(-53.31)GFS(53.31)FKK 5 3 0.29699 12482 0 0 5112.3 0 0 13783 0 0 4439.9 0 0 40455 0 0 14052 0 0 43922 0 0 20813 0 0 4604.5 0 0 4946.2 0 0 11816 0 0 4825.6 0 0 14137 0 0 4754.2 0 0 39491 0 0 13750 0 0 43465 0 0 20764 0 0 6210.8 0 0 5139.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 89018000 89018000 0 0 NaN 834 504 170 170 2556 2700 2898 3231 2898 3231 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18964 2898 3231 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18964 2898 3231 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18964 P30050 126 P30050 P30050 60S ribosomal protein L12 RPL12 sp|P30050|RL12_HUMAN 60S ribosomal protein L12 OS=Homo sapiens GN=RPL12 PE=1 SV=1 0.907716 9.92825 0.0028355 100.57 9.8599 100.57 1 S NIARQMRHRSLARELSGTIKEILGTAQSVGC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX ELS(0.908)GT(0.092)IK ELS(9.93)GT(-9.93)IK 3 2 0.26746 31892 0 0 29194 0 0 34209 0 0 26235 0 0 22084 0 0 29269 0 0 22577 0 0 27862 0 0 30390 0 0 17847 0 0 30187 0 0 27561 0 0 34165 0 0 27166 0 0 23141 0 0 29219 0 0 23172 0 0 28540 0 0 29655 0 0 17449 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22226000 22226000 0 0 NaN 835 508 126 126 1046 1102 1190 1309 1190 1309 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13692 1190 1309 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13692 1190 1309 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13692 P30050 38 P30050 P30050 60S ribosomal protein L12 RPL12 sp|P30050|RL12_HUMAN 60S ribosomal protein L12 OS=Homo sapiens GN=RPL12 PE=1 SV=1 1 108.3 0.000559917 108.3 59.319 108.3 1 S GATSALAPKIGPLGLSPKKVGDDIAKATGDW X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX IGPLGLS(1)PK IGPLGLS(108.3)PK 7 2 0.10921 16461 0 0 14958 0 0 15488 0 0 14940 0 0 16660 0 0 14108 0 0 16996 0 0 16897 0 0 16376 0 0 12213 0 0 15573 0 0 14130 0 0 15667 0 0 15328 0 0 16842 0 0 14236 0 0 17267 0 0 17208 0 0 16185 0 0 11891 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 56577000 56577000 0 0 NaN 836 508 38 38 1841 1944 2100 2354 2100 2354 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20081 2100 2354 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20081 2100 2354 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20081 P30260 364 P30260 P30260 Cell division cycle protein 27 homolog CDC27 sp|P30260|CDC27_HUMAN Cell division cycle protein 27 homolog OS=Homo sapiens GN=CDC27 PE=1 SV=2 0.948065 14.0388 1.59687E-06 135.59 121.75 135.59 1 S TQSSGPQTSTTPQVLSPTITSPPNALPRRSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPXXX EVTPILAQTQSSGPQT(0.001)S(0.004)T(0.004)T(0.004)PQVLS(0.948)PT(0.037)IT(0.002)S(0.001)PPNALPR EVT(-109.31)PILAQT(-75.76)QS(-57.18)S(-51.01)GPQT(-30.7)S(-24.08)T(-24.08)T(-24.08)PQVLS(14.04)PT(-14.04)IT(-26.59)S(-32.74)PPNALPR 24 4 -0.97253 1610.2 0 0 1817.7 0 0 1884.9 0 0 2319.7 0 0 2180.7 0 0 1510.7 0 0 1866 0 0 2968.7 0 0 2673.9 0 0 25084 0 0 1524.7 0 0 1720 0 0 1885.3 0 0 2338.2 0 0 2191.9 0 0 1615.9 0 0 1936.7 0 0 3677.2 0 0 2604 0 0 23688 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17857000 17857000 0 0 NaN 837 513 364 364 1224 1288 1388 1539 1388 1539 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21250 1388 1539 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21250 1388 1539 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21250 P30291 139 P30291 P30291 Wee1-like protein kinase WEE1 sp|P30291|WEE1_HUMAN Wee1-like protein kinase OS=Homo sapiens GN=WEE1 PE=1 SV=2 0.915211 12.4878 5.76965E-07 140.63 108.1 140.63 1 S PVKSPAAPYFLGSSFSPVRCGGPGDASPRGC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPXXXXXXXXXXXX SPAAPYFLGS(0.052)S(0.033)FS(0.915)PVR S(-115.12)PAAPY(-88.11)FLGS(-12.49)S(-14.41)FS(12.49)PVR 13 3 -0.27668 1982.4 0 0 3231.2 0 0 2610.1 0 0 2798 0 0 2526.8 0 0 2453.6 0 0 2474.9 0 0 2489.5 0 0 2863.9 0 0 8831.2 0 0 1878.3 0 0 3049.9 0 0 2591.1 0 0 2893.8 0 0 2568.8 0 0 2491.8 0 0 2532.4 0 0 2761.9 0 0 2809.3 0 0 8373.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 41889000 41889000 0 0 NaN 838 514 139 139 4073 4343 4633 5146 4633 5146 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22054 4633 5146 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22054 4633 5146 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22054 P30291 165 P30291 P30291 Wee1-like protein kinase WEE1 sp|P30291|WEE1_HUMAN Wee1-like protein kinase OS=Homo sapiens GN=WEE1 PE=1 SV=2 1 123.191 7.37334E-05 123.19 99.771 123.19 2 S SPRGCGARRAGEGRRSPRPDHPGTPPHKTFR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX S(1)PRPDHPGT(1)PPHK S(123.19)PRPDHPGT(123.19)PPHK 1 4 0.5098 0 10312 0 0 10355 0 0 10377 0 0 12052 0 0 8333.9 0 0 11105 0 0 8891.3 0 0 10323 0 0 12931 0 0 3101.4 0 0 9758.5 0 0 9791.9 0 0 10422 0 0 12256 0 0 8589.6 0 0 11169 0 0 9134.4 0 0 10479 0 0 12588 0 0 3159.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 30172000 0 30172000 0 NaN 839 514 165 165 4162 4437 4729 5248 4729 5248 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6493 4729 5248 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6493 4729 5248 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6493 P30307 214 P30307 P30307 M-phase inducer phosphatase 3 CDC25C sp|P30307|MPIP3_HUMAN M-phase inducer phosphatase 3 OS=Homo sapiens GN=CDC25C PE=1 SV=2 0.604905 1.84986 0.000116426 109.83 78.865 109.83 1 S LKDQEAKVSRSGLYRSPSMPENLNRPRLKQV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(0.605)PS(0.395)MPENLNRPR S(1.85)PS(-1.85)MPENLNRPR 1 3 0.41572 12543 0 0 18008 0 0 15865 0 0 18345 0 0 12983 0 0 14906 0 0 11157 0 0 14557 0 0 18429 0 0 2947.8 0 0 11881 0 0 17014 0 0 15746 0 0 18760 0 0 13326 0 0 15096 0 0 11644 0 0 14704 0 0 17875 0 0 3112.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 31023000 31023000 0 0 NaN 840 515 214 214 4181 4456 4749 5268 4749 5268 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10065 4749 5268 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10065 4749 5268 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10065 P30414 379 P30414 P30414 NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase NKTR sp|P30414|NKTR_HUMAN NK-tumor recognition protein OS=Homo sapiens GN=NKTR PE=1 SV=2 0.999943 42.4303 0.0185552 58.32 37.991 58.32 1 S HWKEEMQRLRAYRPPSGEKWSKGDKLSDPCS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX AYRPPS(1)GEK AY(-42.43)RPPS(42.43)GEK 6 3 -0.076884 16795 0 0 18314 0 0 17426 0 0 17384 0 0 15076 0 0 18400 0 0 14942 0 0 17780 0 0 18288 0 0 2427.4 0 0 15895 0 0 17296 0 0 17482 0 0 17923 0 0 15440 0 0 18394 0 0 15308 0 0 17932 0 0 17903 0 0 2697.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 49046000 49046000 0 0 NaN 841 516 379 379 589 627 668 743 668 743 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8839 668 743 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8839 668 743 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8839 P30414 463 P30414 P30414 NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase NKTR sp|P30414|NKTR_HUMAN NK-tumor recognition protein OS=Homo sapiens GN=NKTR PE=1 SV=2 0.999993 53.0431 0.0001358 121.56 90.08 121.56 1 S CRRHKQTKKRRILIPSDIESSKSSTRRMKSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX ILIPS(1)DIESSK ILIPS(53.04)DIES(-53.04)S(-57.61)K 5 2 -0.14875 6346.2 0 0 9256.9 0 0 7020.2 0 0 8820.2 0 0 6655.6 0 0 6190.6 0 0 6228.3 0 0 8634.7 0 0 10313 0 0 27827 0 0 6007.7 0 0 8742.2 0 0 7024.9 0 0 9040.7 0 0 6773.5 0 0 6405.6 0 0 6472.2 0 0 9405 0 0 10002 0 0 26402 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7506300 7506300 0 0 NaN 842 516 463 463 1883 1987 2145 2404 2145 2404 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21119 2145 2404 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21119 2145 2404 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21119 P30414 347 P30414 P30414 NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase NKTR sp|P30414|NKTR_HUMAN NK-tumor recognition protein OS=Homo sapiens GN=NKTR PE=1 SV=2 1 86.6525 0.00306898 97.749 73.945 97.749 2 S KIKGRGTIRYHTPPRSRSCSESDDDDSSETP X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPXXXXXXXXXXXXXX Y(0.001)HT(0.999)PPRS(1)R Y(-31.07)HT(31.07)PPRS(86.65)R 7 2 0.64028 0 3466.2 0 0 4035.2 0 0 3792.8 0 0 3483.4 0 0 2655.9 0 0 4257.6 0 0 3358 0 0 3065.6 0 0 3673 0 0 2220.5 0 0 3281.1 0 0 3808.8 0 0 3787.8 0 0 3622.7 0 0 2772.6 0 0 4222.3 0 0 3393.1 0 0 3188.1 0 0 3610.8 0 0 2161.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 4553400 0 4553400 0 NaN 843 516 347 347 5388 5740 6127 6814 6127 6814 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5408 6127 6814 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5408 6127 6814 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5408 P30419 47 P30419 P30419 Glycylpeptide N-tetradecanoyltransferase 1 NMT1 sp|P30419|NMT1_HUMAN Glycylpeptide N-tetradecanoyltransferase 1 OS=Homo sapiens GN=NMT1 PE=1 SV=2 0.999997 55.7201 4.82789E-11 199.84 147.85 86.548 1 S DCENEEDNSYNRGGLSPANDTGAKKKKKKQK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX GGLS(1)PANDTGAK GGLS(55.72)PANDT(-55.72)GAK 4 3 -0.56232 85611 0 0 88812 0 0 86044 0 0 86305 0 0 55085 0 0 80844 0 0 57587 0 0 80044 0 0 96223 0 0 21583 0 0 81011 0 0 83883 0 0 86242 0 0 88681 0 0 57800 0 0 81309 0 0 59557 0 0 80971 0 0 93305 0 0 22175 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 543740000 543740000 0 0 NaN 844 517 47 47 1437 1514 1623;1624 1793;1794 1624 1794 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10663 1623 1793 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10557 1623 1793 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10557 P30419;O60551 300;302 P30419 P30419 Glycylpeptide N-tetradecanoyltransferase 1;Glycylpeptide N-tetradecanoyltransferase 2 NMT1;NMT2 sp|P30419|NMT1_HUMAN Glycylpeptide N-tetradecanoyltransferase 1 OS=Homo sapiens GN=NMT1 PE=1 SV=2;sp|O60551|NMT2_HUMAN Glycylpeptide N-tetradecanoyltransferase 2 OS=Homo sapiens GN=NMT2 PE=1 SV=1 0.999097 30.4408 0.0233904 54.471 16.282 54.471 1 S VVLPKPVGTCRYWHRSLNPRKLIEVKFSHLS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX Y(0.001)WHRS(0.999)LNPR Y(-30.44)WHRS(30.44)LNPR 5 3 -2.7046 9589 0 0 10226 0 0 11626 0 0 10656 0 0 20979 0 0 10104 0 0 18941 0 0 12858 0 0 10016 0 0 1534.2 0 0 9081.2 0 0 9662.8 0 0 11700 0 0 10906 0 0 20700 0 0 10190 0 0 19134 0 0 12837 0 0 10262 0 0 1742.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18755000 18755000 0 0 NaN 845 517 300 300 5454 5810 6204 6906 6204 6906 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9908 6204 6906 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9908 6204 6906 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9908 P30622;Q9UDT6 348;352 P30622 P30622 CAP-Gly domain-containing linker protein 1;CAP-Gly domain-containing linker protein 2 CLIP1;CLIP2 sp|P30622|CLIP1_HUMAN CAP-Gly domain-containing linker protein 1 OS=Homo sapiens GN=CLIP1 PE=1 SV=2;sp|Q9UDT6|CLIP2_HUMAN CAP-Gly domain-containing linker protein 2 OS=Homo sapiens GN=CLIP2 PE=1 SV=1 0.997798 26.6002 8.4024E-16 216.16 170.37 216.16 1 S TGLLTETSSRYARKISGTTALQEALKEKQQH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX KIS(0.998)GT(0.002)TALQEALK KIS(26.6)GT(-26.6)T(-47.11)ALQEALK 3 3 0.44373 9176.7 0 0 9135.4 0 0 9268.1 0 0 8423.8 0 0 17908 0 0 10393 0 0 19596 0 0 13981 0 0 10470 0 0 9347.1 0 0 8683.9 0 0 8625.8 0 0 9436.2 0 0 8724.4 0 0 17678 0 0 10392 0 0 19616 0 0 14166 0 0 10717 0 0 9125 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19867000 19867000 0 0 NaN 846 518 348 348 2098 2219 2390 2664 2390 2664 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18909 2390 2664 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18909 2390 2664 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18909 P30622 312 P30622 P30622 CAP-Gly domain-containing linker protein 1 CLIP1 sp|P30622|CLIP1_HUMAN CAP-Gly domain-containing linker protein 1 OS=Homo sapiens GN=CLIP1 PE=1 SV=2 0.795199 6.7312 0.000814234 99.396 88.492 99.396 1 S RRVMATTSASLKRSPSASSLSSMSSVASSVS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.017)PS(0.795)AS(0.169)S(0.018)LS(0.001)SMSSVASSVSSRPSR S(-16.62)PS(6.73)AS(-6.73)S(-16.45)LS(-31.55)S(-37.29)MS(-65.62)S(-74.02)VAS(-81.13)S(-83.91)VS(-83.91)S(-83.91)RPS(-84.11)R 3 3 -2.0274 7275.8 0 0 8289.8 0 0 7562.9 0 0 7953.8 0 0 6254.7 0 0 8258 0 0 6453.1 0 0 9845.9 0 0 8253.8 0 0 13018 0 0 6885.9 0 0 7829.2 0 0 7583.3 0 0 8192.1 0 0 6429 0 0 8308.3 0 0 6608.4 0 0 10207 0 0 8067.7 0 0 12486 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10562000 10562000 0 0 NaN 847 518 312 312 4168 4443 4735 5254 4735 5254 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15457 4735 5254 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15457 4735 5254 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15457 P31323 114 P31323 P31323 cAMP-dependent protein kinase type II-beta regulatory subunit PRKAR2B sp|P31323|KAP3_HUMAN cAMP-dependent protein kinase type II-beta regulatory subunit OS=Homo sapiens GN=PRKAR2B PE=1 SV=3 1 98.9866 1.60753E-11 195.58 183.02 195.58 1 S GAFNAPVINRFTRRASVCAEAYNPDEEEDDA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RAS(1)VCAEAYNPDEEEDDAESR RAS(98.99)VCAEAY(-98.99)NPDEEEDDAES(-160.25)R 3 3 -0.28042 4251.6 0 0 7488.1 0 0 4383.4 0 0 7891.3 0 0 5058.6 0 0 3980.7 0 0 4846.8 0 0 5551.4 0 0 8422.3 0 0 7643 0 0 4023.6 0 0 7076.1 0 0 4414.1 0 0 8015.1 0 0 5094 0 0 4198.6 0 0 5041.7 0 0 5737.9 0 0 8158.7 0 0 7325.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26092000 26092000 0 0 NaN 848 519 114 114 3203 3397 3631 4027 3631 4027 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10364 3631 4027 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10364 3631 4027 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10364 P31350 20 P31350 P31350 Ribonucleoside-diphosphate reductase subunit M2 RRM2 sp|P31350|RIR2_HUMAN Ribonucleoside-diphosphate reductase subunit M2 OS=Homo sapiens GN=RRM2 PE=1 SV=1 1 190.377 6.37657E-23 270.68 242.97 270.68 1 S RVPLAPITDPQQLQLSPLKGLSLVDKENTPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX VPLAPITDPQQLQLS(1)PLK VPLAPIT(-190.38)DPQQLQLS(190.38)PLK 15 3 0.097924 75359 0 0 263040 0 0 84046 0 0 255330 0 0 19093 0 0 86852 0 0 20066 0 0 118770 0 0 293410 0 0 30793 0 0 71341 0 0 248440 0 0 83337 0 0 259930 0 0 23482 0 0 95035 0 0 27864 0 0 118830 0 0 277920 0 0 31744 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1121100000 1121100000 0 0 NaN 849 520 20 20 5205 5549 5913 6570 5913 6570 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23540 5913 6570 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23540 5913 6570 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23540 P31942 216 P31942 P31942 Heterogeneous nuclear ribonucleoprotein H3 HNRNPH3 sp|P31942|HNRH3_HUMAN Heterogeneous nuclear ribonucleoprotein H3 OS=Homo sapiens GN=HNRNPH3 PE=1 SV=2 1 92.5865 5.66127E-05 117.38 99.242 117.38 1 S GLPFRATENDIANFFSPLNPIRVHIDIGADG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPXXXXXXXXX ATENDIANFFS(1)PLNPIR AT(-92.59)ENDIANFFS(92.59)PLNPIR 11 3 0.17305 4933.2 0 0 5718.9 0 0 4511.9 0 0 5441 0 0 6071.6 0 0 4591.9 0 0 5819.2 0 0 6485.8 0 0 6523 0 0 26986 0 0 4666.5 0 0 5400.9 0 0 4586 0 0 5589.9 0 0 6066.4 0 0 4715.2 0 0 5954.8 0 0 7245.4 0 0 6406.4 0 0 25560 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17813000 17813000 0 0 NaN 850 523 216 216 523 556 596 663 596 663 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23906 596 663 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23906 596 663 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23906 P31942 298 P31942 P31942 Heterogeneous nuclear ribonucleoprotein H3 HNRNPH3 sp|P31942|HNRH3_HUMAN Heterogeneous nuclear ribonucleoprotein H3 OS=Homo sapiens GN=HNRNPH3 PE=1 SV=2 1 99.3968 2.33124E-05 136.08 114.02 136.08 1 S GGYGRDGMDNQGGYGSVGRMGMGNNYSGGYG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPXXXXXXXXXXXX DGMDNQGGYGS(1)VGR DGMDNQGGY(-99.4)GS(99.4)VGR 11 2 1.8269 10647 0 0 12874 0 0 10223 0 0 14415 0 0 17381 0 0 11172 0 0 18794 0 0 13204 0 0 13720 0 0 9351.9 0 0 10073 0 0 12170 0 0 10409 0 0 14655 0 0 17231 0 0 11386 0 0 18924 0 0 13448 0 0 13753 0 0 9111.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8281200 8281200 0 0 NaN 851 523 298 298 682 726 774 856 774 856 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9442 774 856 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9442 774 856 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9442 P31943;P52597 310;310 P31943;P52597 P31943 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed HNRNPH1;HNRNPF sp|P31943|HNRH1_HUMAN Heterogeneous nuclear ribonucleoprotein H OS=Homo sapiens GN=HNRNPH1 PE=1 SV=4;sp|P52597|HNRPF_HUMAN Heterogeneous nuclear ribonucleoprotein F OS=Homo sapiens GN=HNRNPF PE=1 SV=3 0.997869 26.9709 0.0474595 48.883 25.033 48.883 1 S GLPYKATENDIYNFFSPLNPVRVHIEIGPDG;GLPYRATENDIYNFFSPLNPVRVHIEIGPDG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPXXXXXXXXX ATENDIY(0.002)NFFS(0.998)PLNPVR AT(-38.96)ENDIY(-26.97)NFFS(26.97)PLNPVR 11 2 1.7731 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 852 524;694 310;310 310 524 557 597 664 597 664 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23884 597 664 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23884 597 664 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23884 P31943;P55795 104;104 P31943 P31943 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 HNRNPH1;HNRNPH2 sp|P31943|HNRH1_HUMAN Heterogeneous nuclear ribonucleoprotein H OS=Homo sapiens GN=HNRNPH1 PE=1 SV=4;sp|P55795|HNRH2_HUMAN Heterogeneous nuclear ribonucleoprotein H2 OS=Homo sapiens GN=HNRNPH2 PE=1 SV=1 0.999942 42.3919 8.43438E-16 218.11 195.23 200.2 1 S NNVEMDWVLKHTGPNSPDTANDGFVRLRGLP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPXXXXX HTGPNS(1)PDTANDGFVR HT(-82.15)GPNS(42.39)PDT(-42.39)ANDGFVR 6 3 -0.57036 29378 0 0 33269 0 0 28269 0 0 32475 0 0 33200 0 0 28250 0 0 35182 0 0 31791 0 0 32514 0 0 10686 0 0 27795 0 0 31424 0 0 28593 0 0 33325 0 0 33426 0 0 28570 0 0 35644 0 0 32073 0 0 32195 0 0 10798 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 734460000 734460000 0 0 NaN 853 524 104 104 1758 1857 2003;2004 2233;2234 2003 2233 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8691 2004 2234 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9095 2004 2234 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9095 P31948 481 P31948 P31948 Stress-induced-phosphoprotein 1 STIP1 sp|P31948|STIP1_HUMAN Stress-induced-phosphoprotein 1 OS=Homo sapiens GN=STIP1 PE=1 SV=1 1 148.784 4.50815E-06 148.78 109.98 148.78 1 S DGYQRCMMAQYNRHDSPEDVKRRAMADPEVQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX HDS(1)PEDVKR HDS(148.78)PEDVKR 3 3 0.077987 16136 0 0 33412 0 0 18496 0 0 30499 0 0 17243 0 0 15135 0 0 18586 0 0 23394 0 0 33161 0 0 4055 0 0 15278 0 0 31547 0 0 18476 0 0 31246 0 0 17605 0 0 15967 0 0 19253 0 0 23268 0 0 32102 0 0 4359.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 44331000 44331000 0 0 NaN 854 526 481 481 1703 1796 1940 2162 1940 2162 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6229 1940 2162 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6229 1940 2162 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6229 P32249 328 P32249 P32249 G-protein coupled receptor 183 GPR183 sp|P32249|GP183_HUMAN G-protein coupled receptor 183 OS=Homo sapiens GN=GPR183 PE=1 SV=3 0.962182 14.0558 0.000129167 111.35 69.952 111.35 1 S KGYKRKVMRMLKRQVSVSISSAVKSAPEENS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX QVS(0.962)VS(0.038)ISSAVK QVS(14.06)VS(-14.06)IS(-57.98)S(-78.69)AVK 3 3 0.30405 6134.7 0 0 4210.7 0 0 6986.2 0 0 4254.3 0 0 3823.7 0 0 8649 0 0 4132.3 0 0 5291.9 0 0 4615 0 0 4120.5 0 0 5808.2 0 0 3978 0 0 6947.6 0 0 4436.1 0 0 4071.9 0 0 8438.9 0 0 4204.7 0 0 5562.4 0 0 4533.2 0 0 4002.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8185700 8185700 0 0 NaN 855 527 328 328 3171 3364 3596 3986 3596 3986 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16409 3596 3986 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16409 3596 3986 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16409 P32519 187 P32519 P32519 ETS-related transcription factor Elf-1 ELF1 sp|P32519|ELF1_HUMAN ETS-related transcription factor Elf-1 OS=Homo sapiens GN=ELF1 PE=1 SV=2 0.992353 21.8277 1.17281E-11 208.46 185.36 208.46 1 S PKRKKGRKTKPPRPDSPATTPNISVKKKNKD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPXXXXX T(0.007)KPPRPDS(0.992)PAT(0.001)TPNISVK T(-21.83)KPPRPDS(21.83)PAT(-29.43)T(-63.54)PNIS(-146.76)VK 8 4 -0.29891 54129 0 0 20189 0 0 54769 0 0 18516 0 0 22492 0 0 55226 0 0 22251 0 0 32186 0 0 18993 0 0 6785.2 0 0 51222 0 0 19063 0 0 54716 0 0 19704 0 0 24724 0 0 53441 0 0 22572 0 0 33383 0 0 18879 0 0 7134 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 139410000 139410000 0 0 NaN 856 528 187 187 4760 5077 5410 6014;6015 5410 6015 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12444 5410 6015 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12444 5410 6015 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12444 P32519 333 P32519 P32519 ETS-related transcription factor Elf-1 ELF1 sp|P32519|ELF1_HUMAN ETS-related transcription factor Elf-1 OS=Homo sapiens GN=ELF1 PE=1 SV=2 0.499786 0 0.00030123 132.22 85.886 132.22 S SATSNRNQTSRSRVSSSPGVKGGATTVLKPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX VSS(0.5)S(0.5)PGVK VS(-30.68)S(0)S(0)PGVK 3 2 0.22332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 857 528 333 333 5281 5628 5999 6665 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9568 5999 6665 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9568 5999 6665 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9568 P32519 334 P32519 P32519 ETS-related transcription factor Elf-1 ELF1 sp|P32519|ELF1_HUMAN ETS-related transcription factor Elf-1 OS=Homo sapiens GN=ELF1 PE=1 SV=2 0.499786 0 0.00030123 132.22 85.886 132.22 S ATSNRNQTSRSRVSSSPGVKGGATTVLKPGN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VSS(0.5)S(0.5)PGVK VS(-30.68)S(0)S(0)PGVK 4 2 0.22332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 858 528 334 334 5281 5628 5999 6665 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9568 5999 6665 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9568 5999 6665 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9568 P32519 168 P32519 P32519 ETS-related transcription factor Elf-1 ELF1 sp|P32519|ELF1_HUMAN ETS-related transcription factor Elf-1 OS=Homo sapiens GN=ELF1 PE=1 SV=2 0.960314 13.8381 0.000119227 115.04 97.548 115.04 1 S TQQVQEKYADSPGASSPEQPKRKKGRKTKPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPXXXXXXXXXX YADSPGAS(0.04)S(0.96)PEQPK Y(-90.48)ADS(-55.4)PGAS(-13.84)S(13.84)PEQPK 9 3 -0.49801 35018 0 0 29573 0 0 34682 0 0 29957 0 0 26398 0 0 40143 0 0 26953 0 0 32274 0 0 31631 0 0 6952.8 0 0 33134 0 0 27939 0 0 34842 0 0 30899 0 0 27290 0 0 39697 0 0 27537 0 0 32887 0 0 31012 0 0 7293.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 127640000 127640000 0 0 NaN 859 528 168 168 5356 5705 6083 6761 6083 6761 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9967 6083 6761 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9967 6083 6761 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9967 P33240 524 P33240 P33240 Cleavage stimulation factor subunit 2 CSTF2 sp|P33240|CSTF2_HUMAN Cleavage stimulation factor subunit 2 OS=Homo sapiens GN=CSTF2 PE=1 SV=1 1 68.5279 1.82911E-58 364.62 344.38 364.62 1 S MQGASIQGGSQPGGFSPGQNQVTPQDHEKAA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPPXX QVPVMQGTGMQGASIQGGSQPGGFS(1)PGQNQVTPQDHEK QVPVMQGT(-283.24)GMQGAS(-203.58)IQGGS(-86.51)QPGGFS(68.53)PGQNQVT(-68.53)PQDHEK 25 4 0.27264 8091.1 0 0 6965.1 0 0 9088.2 0 0 6639.8 0 0 8182.7 0 0 7902.5 0 0 7580.7 0 0 9032.3 0 0 7235.6 0 0 13986 0 0 7660 0 0 6577.9 0 0 9081.7 0 0 6857.7 0 0 8348.5 0 0 7905.2 0 0 7736 0 0 9437.7 0 0 7154 0 0 13378 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 70595000 70595000 0 0 NaN 860 530 524 524 3168 3360;3361 3592;3593 3982;3983 3593 3983 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16359 3593 3983 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16359 3593 3983 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16359 P33241 204 P33241 P33241 Lymphocyte-specific protein 1 LSP1 sp|P33241|LSP1_HUMAN Lymphocyte-specific protein 1 OS=Homo sapiens GN=LSP1 PE=1 SV=1 0.999597 33.9503 0.000124128 121.45 81.82 121.45 1 S SPPLSPTTKLIDRTESLNRSIEKSNSVKKSQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX LIDRTES(1)LNR LIDRT(-33.95)ES(33.95)LNR 7 3 0.56616 9505.3 0 0 4246.3 0 0 11548 0 0 4013.1 0 0 12354 0 0 10706 0 0 11003 0 0 8630.3 0 0 5184.1 0 0 1692.4 0 0 9002.1 0 0 4010 0 0 11518 0 0 4242.3 0 0 12465 0 0 10409 0 0 11105 0 0 8788.3 0 0 5361.9 0 0 1793.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16555000 16555000 0 0 NaN 861 531 204 204 2404 2541 2734 3054 2734 3054 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11715 2734 3054 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11715 2734 3054 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11715 P33241 252 P33241 P33241 Lymphocyte-specific protein 1 LSP1 sp|P33241|LSP1_HUMAN Lymphocyte-specific protein 1 OS=Homo sapiens GN=LSP1 PE=1 SV=1 0.999985 48.3392 4.57849E-05 129.02 112.38 129.02 1 S AIETAGRTPKLARQASIELPSMAVASTKSRW X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX QAS(1)IELPSMAVASTK QAS(48.34)IELPS(-48.34)MAVAS(-107.33)T(-110.88)K 3 3 0.3619 27866 0 0 15389 0 0 29545 0 0 16161 0 0 38358 0 0 29437 0 0 41445 0 0 27604 0 0 16401 0 0 17386 0 0 26374 0 0 14541 0 0 29767 0 0 16760 0 0 38425 0 0 28923 0 0 41353 0 0 28283 0 0 17245 0 0 17010 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 172560000 172560000 0 0 NaN 862 531 252 252 2998 3177;3178 3400;3401 3770;3771 3400 3770 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16691 3400 3770 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16691 3400 3770 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16691 P33241 177 P33241 P33241 Lymphocyte-specific protein 1 LSP1 sp|P33241|LSP1_HUMAN Lymphocyte-specific protein 1 OS=Homo sapiens GN=LSP1 PE=1 SV=1 0.5 0 3.01609E-12 193.09 175 193.09 1 S EEQEEHQKCQQPRTPSPLVLEGTIEQSSPPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T(0.5)PS(0.5)PLVLEGTIEQSSPPLSPTTK T(0)PS(0)PLVLEGT(-69.57)IEQS(-140.7)S(-147.19)PPLS(-172.2)PT(-182.4)T(-183.63)K 3 3 0.61556 1964 0 0 3094.9 0 0 3181.5 0 0 2337.4 0 0 6104.7 0 0 3227.2 0 0 6491.2 0 0 4875 0 0 3162 0 0 32825 0 0 1863 0 0 2919.3 0 0 3170.1 0 0 2460.5 0 0 6024.8 0 0 3277.6 0 0 6497.8 0 0 5815.2 0 0 3261.1 0 0 31022 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10805000 10805000 0 0 NaN 863 531 177 177 4852 5177 5516 6134 5516 6134 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22119 5516 6134 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22119 5516 6134 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22119 P33316 99 P33316 P33316 Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial DUT sp|P33316|DUT_HUMAN Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial OS=Homo sapiens GN=DUT PE=1 SV=4 0.542087 3.26745 0.00490583 90.1 66.962 90.1 1 S KAGGSPAPGPETPAISPSKRARPAEVGGMQL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX AGGS(0.255)PAPGPET(0.166)PAIS(0.542)PS(0.037)KR AGGS(-3.27)PAPGPET(-5.15)PAIS(3.27)PS(-11.67)KR 15 3 0.25827 18862 0 0 17852 0 0 18024 0 0 18802 0 0 24597 0 0 19182 0 0 25978 0 0 24393 0 0 21047 0 0 161730 0 0 17845 0 0 16869 0 0 18280 0 0 19254 0 0 24588 0 0 19580 0 0 26242 0 0 29139 0 0 20976 0 0 152850 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12596000 12596000 0 0 NaN 864 532 99 99 207 217 235 263 235 263 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11126 235 263 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11126 235 263 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11126 P33527 930 P33527 P33527 Multidrug resistance-associated protein 1 ABCC1 sp|P33527|MRP1_HUMAN Multidrug resistance-associated protein 1 OS=Homo sapiens GN=ABCC1 PE=1 SV=3 0.964427 14.3315 4.58495E-07 168.93 79.379 168.93 1 S SSSSSYSGDISRHHNSTAELQKAEAKKEETW X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX HHNS(0.964)T(0.036)AELQK HHNS(14.33)T(-14.33)AELQK 4 3 -0.68118 6262.7 0 0 11656 0 0 6319.8 0 0 11621 0 0 16871 0 0 6051.3 0 0 17485 0 0 11282 0 0 11563 0 0 3917.4 0 0 5926.3 0 0 11011 0 0 6490.8 0 0 11845 0 0 16501 0 0 6387 0 0 17607 0 0 11232 0 0 11660 0 0 3949.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20589000 20589000 0 0 NaN 865 533 930 930 1717 1811 1956 2180 1956 2180 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6565 1956 2180 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6565 1956 2180 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6565 P33527 916 P33527 P33527 Multidrug resistance-associated protein 1 ABCC1 sp|P33527|MRP1_HUMAN Multidrug resistance-associated protein 1 OS=Homo sapiens GN=ABCC1 PE=1 SV=3 0.335493 0 1.81398E-10 193.56 158.21 193.56 S LVTDSAGKQLQRQLSSSSSYSGDISRHHNST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX QLS(0.23)S(0.335)S(0.335)S(0.071)S(0.028)YSGDISR QLS(-1.65)S(0)S(0)S(-6.72)S(-10.84)Y(-86.46)S(-31.55)GDIS(-89.47)R 4 2 -0.834 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 866 533 916 916 3080 3266 3494 3870 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10991 3494 3870 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10991 3494 3870 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10991 P33527 917 P33527 P33527 Multidrug resistance-associated protein 1 ABCC1 sp|P33527|MRP1_HUMAN Multidrug resistance-associated protein 1 OS=Homo sapiens GN=ABCC1 PE=1 SV=3 0.335493 0 1.81398E-10 193.56 158.21 193.56 S VTDSAGKQLQRQLSSSSSYSGDISRHHNSTA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QLS(0.23)S(0.335)S(0.335)S(0.071)S(0.028)YSGDISR QLS(-1.65)S(0)S(0)S(-6.72)S(-10.84)Y(-86.46)S(-31.55)GDIS(-89.47)R 5 2 -0.834 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 867 533 917 917 3080 3266 3494 3870 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10991 3494 3870 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10991 3494 3870 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10991 P33981 455 P33981 P33981 Dual specificity protein kinase TTK TTK sp|P33981|TTK_HUMAN Dual specificity protein kinase TTK OS=Homo sapiens GN=TTK PE=1 SV=2 0.65825 3.83496 0.021921 80.596 62.457 80.596 1 S STSKWFDPKSICKTPSSNTLDDYMSCFRTPV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX T(0.272)PS(0.658)S(0.057)NT(0.012)LDDYMSCFR T(-3.83)PS(3.83)S(-10.62)NT(-17.22)LDDY(-72.62)MS(-65.8)CFR 3 2 -1.0613 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 868 534 455 455 4859 5184 5523 6141 5523 6141 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21273 5523 6141 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21273 5523 6141 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21273 P33991 326 P33991 P33991 DNA replication licensing factor MCM4 MCM4 sp|P33991|MCM4_HUMAN DNA replication licensing factor MCM4 OS=Homo sapiens GN=MCM4 PE=1 SV=5 1 96.9565 0.00287279 96.957 83.187 96.957 1 S HTTRVEMDRGRIAEPSVCGRCHTTHSMALIH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX IAEPS(1)VCGR IAEPS(96.96)VCGR 5 2 -1.4027 32417 0 0 37273 0 0 36228 0 0 37042 0 0 42600 0 0 37479 0 0 38553 0 0 38856 0 0 43980 0 0 16405 0 0 30689 0 0 35209 0 0 36331 0 0 38055 0 0 42802 0 0 37595 0 0 39587 0 0 39417 0 0 43164 0 0 16347 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30173000 30173000 0 0 NaN 869 535 326 326 1770 1869 2016 2247 2016 2247 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10915 2016 2247 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10915 2016 2247 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10915 P33991 120 P33991 P33991 DNA replication licensing factor MCM4 MCM4 sp|P33991|MCM4_HUMAN DNA replication licensing factor MCM4 OS=Homo sapiens GN=MCM4 PE=1 SV=5 1 67.2517 0.016105 67.252 42.908 67.252 1 S SGVRGTPVRQRPDLGSAQKGLQVDLQSDGAA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX QRPDLGS(1)AQK QRPDLGS(67.25)AQK 7 2 0.019706 16397 0 0 13478 0 0 17111 0 0 14930 0 0 17344 0 0 17248 0 0 14712 0 0 14756 0 0 16726 0 0 4175.8 0 0 15519 0 0 12741 0 0 17187 0 0 15278 0 0 17552 0 0 17162 0 0 15157 0 0 15023 0 0 16419 0 0 4273.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10252000 10252000 0 0 NaN 870 535 120 120 3125 3316 3546 3930 3546 3930 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8535 3546 3930 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8535 3546 3930 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8535 P34741 187 P34741 P34741 Syndecan-2 SDC2 sp|P34741|SDC2_HUMAN Syndecan-2 OS=Homo sapiens GN=SDC2 PE=1 SV=2 0.848889 7.4968 0.000396644 107.61 75.085 107.61 1 S RKKDEGSYDLGERKPSSAAYQKAPTKEFYA_ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX KPS(0.849)S(0.151)AAYQK KPS(7.5)S(-7.5)AAY(-42.88)QK 3 3 0.12415 106410 0 0 9014.8 0 0 102820 0 0 10007 0 0 10069 0 0 104080 0 0 11688 0 0 39737 0 0 10227 0 0 3338.8 0 0 100670 0 0 8521.6 0 0 102610 0 0 11726 0 0 15716 0 0 99324 0 0 11780 0 0 42453 0 0 10153 0 0 4063.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 90030000 90030000 0 0 NaN 871 537 187 187 2172 2295 2470 2750 2470 2750 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9665 2470 2750 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9665 2470 2750 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9665 P34897 266 P34897 P34897 Serine hydroxymethyltransferase, mitochondrial SHMT2 sp|P34897|GLYM_HUMAN Serine hydroxymethyltransferase, mitochondrial OS=Homo sapiens GN=SHMT2 PE=1 SV=3 1 71.6136 0.0197054 71.614 32.466 71.614 1 S DMAHISGLVAAKVIPSPFKHADIVTTTTHKT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX VIPS(1)PFK VIPS(71.61)PFK 4 2 -0.2232 20126 0 0 24483 0 0 18762 0 0 21012 0 0 10679 0 0 19367 0 0 10569 0 0 17236 0 0 23310 0 0 7960.5 0 0 19039 0 0 23108 0 0 18872 0 0 21760 0 0 11325 0 0 19474 0 0 11113 0 0 17611 0 0 22459 0 0 7894.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18893000 18893000 0 0 NaN 872 538 266 266 5137 5474 5831 6482 5831 6482 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19567 5831 6482 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19567 5831 6482 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19567 P34932 647 P34932 P34932 Heat shock 70 kDa protein 4 HSPA4 sp|P34932|HSP74_HUMAN Heat shock 70 kDa protein 4 OS=Homo sapiens GN=HSPA4 PE=1 SV=4 0.993586 22.0408 0.00232947 94.973 77.272 94.973 1 S LSGEYEKFVSEDDRNSFTLKLEDTENWLYED X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPXXXXXXXXXXX FVSEDDRNS(0.994)FT(0.006)LK FVS(-36.88)EDDRNS(22.04)FT(-22.04)LK 9 3 0.22141 13208 0 0 17291 0 0 12006 0 0 17008 0 0 13019 0 0 13931 0 0 12681 0 0 15647 0 0 20489 0 0 10557 0 0 12494 0 0 16333 0 0 12171 0 0 17431 0 0 13154 0 0 14143 0 0 13138 0 0 15947 0 0 19885 0 0 10303 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20701000 20701000 0 0 NaN 873 539 647 647 1342 1415 1522 1685 1522 1685 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17679 1522 1685 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17679 1522 1685 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17679 P35125;Q8NFA0 1214;1416 P35125 P35125 Ubiquitin carboxyl-terminal hydrolase 6;Ubiquitin carboxyl-terminal hydrolase 32 USP6;USP32 sp|P35125|UBP6_HUMAN Ubiquitin carboxyl-terminal hydrolase 6 OS=Homo sapiens GN=USP6 PE=1 SV=2;sp|Q8NFA0|UBP32_HUMAN Ubiquitin carboxyl-terminal hydrolase 32 OS=Homo sapiens GN=USP32 PE=1 SV=1 1 60.3636 0.0159881 60.364 41.266 60.364 1 S TLGRSKGRLRLPQIGSKNKPSSSKKNLDASK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPXXXXXXXXXXXXXX LRLPQIGS(1)K LRLPQIGS(60.36)K 8 3 0.044284 5606.9 0 0 6705.1 0 0 5380.2 0 0 6395.3 0 0 4361.2 0 0 5175.9 0 0 5314.8 0 0 5895.8 0 0 7873.7 0 0 1389.8 0 0 5304.7 0 0 6332.3 0 0 5419.9 0 0 6565.8 0 0 4501.8 0 0 5254.1 0 0 5434.3 0 0 5927.9 0 0 7660.5 0 0 1445.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21765000 21765000 0 0 NaN 874 540 1214 1214 2536 2679 2875 3207 2875 3207 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18052 2875 3207 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18052 2875 3207 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18052 P35226 315 P35226 P35226 Polycomb complex protein BMI-1 BMI1 sp|P35226|BMI1_HUMAN Polycomb complex protein BMI-1 OS=Homo sapiens GN=BMI1 PE=1 SV=2 0.675698 3.2637 2.57452E-10 177.88 177.07 177.88 1 S PSGNHQSSFANRPRKSSVNGSSATSSG____ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPXXXX KS(0.676)S(0.319)VNGS(0.004)S(0.002)ATSSG KS(3.26)S(-3.26)VNGS(-22.74)S(-25.33)AT(-44.4)S(-63.09)S(-84.89)G 2 2 0.04093 33928 0 0 8133.5 0 0 37104 0 0 7989.1 0 0 8991.5 0 0 35523 0 0 10001 0 0 17709 0 0 7961.5 0 0 2052 0 0 32117 0 0 7682.6 0 0 36837 0 0 8654.2 0 0 10797 0 0 34158 0 0 10075 0 0 18516 0 0 7942.1 0 0 2342 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 70099000 70099000 0 0 NaN 875 541 315 315 2238 2366 2547 2844 2547 2844 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6619 2547 2844 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6619 2547 2844 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6619 P35236 143 P35236 P35236 Tyrosine-protein phosphatase non-receptor type 7 PTPN7 sp|P35236|PTN7_HUMAN Tyrosine-protein phosphatase non-receptor type 7 OS=Homo sapiens GN=PTPN7 PE=1 SV=3 1 66.6268 1.46974E-15 216.72 189.62 216.72 1 S ILPNPQSRVCLGRAQSQEDGDYINANYIRGY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX AQS(1)QEDGDYINANYIR AQS(66.63)QEDGDY(-66.63)INANY(-111.59)IR 3 2 -0.10871 6905.5 0 0 2920 0 0 8896.9 0 0 2905.5 0 0 5791 0 0 8815.7 0 0 6659.8 0 0 7636.3 0 0 2530.2 0 0 21392 0 0 6541.8 0 0 2758.3 0 0 8807.8 0 0 3079.1 0 0 6068.5 0 0 8598.1 0 0 6624.3 0 0 8350.1 0 0 2671.7 0 0 20320 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11617000 11617000 0 0 NaN 876 543 143 143 402 430 465 517 465 517 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15513 465 517 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15513 465 517 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15513 P35236 44 P35236 P35236 Tyrosine-protein phosphatase non-receptor type 7 PTPN7 sp|P35236|PTN7_HUMAN Tyrosine-protein phosphatase non-receptor type 7 OS=Homo sapiens GN=PTPN7 PE=1 SV=3 1 148.514 3.43148E-07 148.51 110.83 148.51 1 S KTPAKKHVRLQERRGSNVALMLDVRSLGAVE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX RGS(1)NVALMLDVR RGS(148.51)NVALMLDVR 3 3 -0.55062 31738 0 0 21101 0 0 30974 0 0 21906 0 0 27207 0 0 31773 0 0 27582 0 0 29590 0 0 20274 0 0 60273 0 0 30030 0 0 19938 0 0 31188 0 0 22601 0 0 27831 0 0 31493 0 0 27858 0 0 31581 0 0 20314 0 0 57439 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 166940000 166940000 0 0 NaN 877 543 44 44 3256 3453;3454 3689;3690 4092;4093;4094 3690 4093 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16970 3690 4093 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16970 3690 4093 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16970 P35251 368 P35251 P35251 Replication factor C subunit 1 RFC1 sp|P35251|RFC1_HUMAN Replication factor C subunit 1 OS=Homo sapiens GN=RFC1 PE=1 SV=4 0.999998 56.969 5.47999E-21 274.71 212.44 274.71 1 S TPKKTKSSPAKKESVSPEDSEKKRTNYQAYR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX ESVS(1)PEDSEK ES(-56.97)VS(56.97)PEDS(-63.73)EK 4 2 0.82074 77461 0 0 65915 0 0 77060 0 0 63036 0 0 64268 0 0 76796 0 0 63850 0 0 73738 0 0 68355 0 0 13993 0 0 73297 0 0 62252 0 0 77461 0 0 65121 0 0 65973 0 0 76350 0 0 65138 0 0 74505 0 0 67255 0 0 14882 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 127410000 127410000 0 0 NaN 878 544 368 368 1175;2047 1236;2166 1334;2333 1477;1478;2600 1334 1478 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9050 1334 1478 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9050 1334 1478 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9050 P35251 311 P35251 P35251 Replication factor C subunit 1 RFC1 sp|P35251|RFC1_HUMAN Replication factor C subunit 1 OS=Homo sapiens GN=RFC1 PE=1 SV=4 0.499933 0 0.0442463 56.407 31.614 56.407 1 S SQQHSKSSADKIGEVSSPKASSKLAIMKRKE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX SSADKIGEVS(0.5)S(0.5)PK S(-38.71)S(-38.71)ADKIGEVS(0)S(0)PK 10 3 -0.18807 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 879 544 311 311 1839;4323 1942;4609 4911 5455 4911 5455 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11661 4911 5455 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11661 4911 5455 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11661 P35251 312 P35251 P35251 Replication factor C subunit 1 RFC1 sp|P35251|RFC1_HUMAN Replication factor C subunit 1 OS=Homo sapiens GN=RFC1 PE=1 SV=4 0.816393 6.48011 0.0196557 68.485 40.472 68.485 1 S QQHSKSSADKIGEVSSPKASSKLAIMKRKEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPXXXXXXXXXXXXX IGEVS(0.184)S(0.816)PK IGEVS(-6.48)S(6.48)PK 6 2 1.4248 21969 0 0 22864 0 0 21008 0 0 21267 0 0 23322 0 0 23468 0 0 22722 0 0 22244 0 0 23060 0 0 5866 0 0 20785 0 0 21590 0 0 21237 0 0 21969 0 0 23523 0 0 23420 0 0 23167 0 0 22537 0 0 22739 0 0 6038.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16489000 16489000 0 0 NaN 880 544 312 312 1839;4323 1942;4609 2098;4911 2352;5455 2098 2352 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12236 2098 2352 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12236 2098 2352 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12236 P35251 156 P35251 P35251 Replication factor C subunit 1 RFC1 sp|P35251|RFC1_HUMAN Replication factor C subunit 1 OS=Homo sapiens GN=RFC1 PE=1 SV=4 1 112.498 0.000660801 112.5 86.939 112.5 1 S MKKNEENTKTKNKPLSPIKLTPTSVLDYFGT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX NKPLS(1)PIK NKPLS(112.5)PIK 5 3 -0.74126 103810 0 0 105210 0 0 94921 0 0 92955 0 0 89268 0 0 98899 0 0 96307 0 0 107740 0 0 103770 0 0 4248.1 0 0 98201 0 0 99322 0 0 96035 0 0 96287 0 0 91029 0 0 98985 0 0 97898 0 0 107850 0 0 102080 0 0 6493.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 229950000 229950000 0 0 NaN 881 544 156 156 2839 3009 3223 3578 3223 3578 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13068 3223 3578 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13068 3223 3578 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13068 P35269 385 P35269 P35269 General transcription factor IIF subunit 1 GTF2F1 sp|P35269|T2FA_HUMAN General transcription factor IIF subunit 1 OS=Homo sapiens GN=GTF2F1 PE=1 SV=2 0.997657 23.4843 6.539E-05 107.7 87.801 107.7 2 S PKRERKPSGGSSRGNSRPGTPSAEGGSTSST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP GNS(0.998)RPGT(0.477)PS(0.525)AEGGSTSSTLR GNS(23.48)RPGT(-0.41)PS(0.41)AEGGS(-47.47)T(-46.87)S(-46.97)S(-46.59)T(-46.2)LR 3 3 -0.11396 0 11894 0 0 9662.5 0 0 13407 0 0 11395 0 0 9949.3 0 0 13619 0 0 9865.5 0 0 11123 0 0 12911 0 0 2382.6 0 0 11260 0 0 9137.7 0 0 13371 0 0 11630 0 0 10302 0 0 13525 0 0 10130 0 0 11325 0 0 12610 0 0 2500.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 91608000 0 91608000 0 NaN 882 546 385 385 1534 1615;1616 1745 1938 1745 1938 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7322 1745 1938 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7322 1745 1938 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7322 P35269 391 P35269 P35269 General transcription factor IIF subunit 1 GTF2F1 sp|P35269|T2FA_HUMAN General transcription factor IIF subunit 1 OS=Homo sapiens GN=GTF2F1 PE=1 SV=2 0.524846 0.413058 6.539E-05 107.7 87.801 107.7 2 S PSGGSSRGNSRPGTPSAEGGSTSSTLRAAAS X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPPXXXX GNS(0.998)RPGT(0.477)PS(0.525)AEGGSTSSTLR GNS(23.48)RPGT(-0.41)PS(0.41)AEGGS(-47.47)T(-46.87)S(-46.97)S(-46.59)T(-46.2)LR 9 3 -0.11396 0 11894 0 0 9662.5 0 0 13407 0 0 11395 0 0 9949.3 0 0 13619 0 0 9865.5 0 0 11123 0 0 12911 0 0 2382.6 0 0 11260 0 0 9137.7 0 0 13371 0 0 11630 0 0 10302 0 0 13525 0 0 10130 0 0 11325 0 0 12610 0 0 2500.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 91608000 0 91608000 0 NaN 883 546 391 391 1534 1615;1616 1745 1938 1745 1938 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7322 1745 1938 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7322 1745 1938 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7322 P35269 433 P35269 P35269 General transcription factor IIF subunit 1 GTF2F1 sp|P35269|T2FA_HUMAN General transcription factor IIF subunit 1 OS=Homo sapiens GN=GTF2F1 PE=1 SV=2 0.985488 18.3193 3.40637E-07 167.01 126.24 167.01 1 S PAAKRLRLDTGPQSLSGKSTPQPPSGKTTPN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX LDTGPQS(0.015)LS(0.985)GK LDT(-82.06)GPQS(-18.32)LS(18.32)GK 9 2 -0.14917 41521 0 0 20700 0 0 39930 0 0 21811 0 0 10697 0 0 41556 0 0 13108 0 0 26078 0 0 22312 0 0 7956.6 0 0 39284 0 0 19561 0 0 39946 0 0 22644 0 0 12624 0 0 40593 0 0 13479 0 0 26998 0 0 21625 0 0 8095.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25902000 25902000 0 0 NaN 884 546 433 433 2322 2455 2644 2955 2644 2955 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14088 2644 2955 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14088 2644 2955 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14088 P35269 203 P35269 P35269 General transcription factor IIF subunit 1 GTF2F1 sp|P35269|T2FA_HUMAN General transcription factor IIF subunit 1 OS=Homo sapiens GN=GTF2F1 PE=1 SV=2 1 47.8938 0.0545647 47.894 11.309 47.894 1 S DEDEEEKEKRGRRKASELRIHDLEDDLEMSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX RKAS(1)ELR RKAS(47.89)ELR 4 3 0.23723 22145 0 0 9592.1 0 0 21878 0 0 8397.5 0 0 9704.2 0 0 22911 0 0 11272 0 0 14579 0 0 8232.8 0 0 3201.9 0 0 20954 0 0 9054.5 0 0 21899 0 0 8928.4 0 0 10586 0 0 22219 0 0 11315 0 0 15043 0 0 8252.2 0 0 3352.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16670000 16670000 0 0 NaN 885 546 203 203 3287 3488 3725 4138 3725 4138 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6418 3725 4138 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6418 3725 4138 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6418 P35579 1943 P35579 P35579 Myosin-9 MYH9 sp|P35579|MYH9_HUMAN Myosin-9 OS=Homo sapiens GN=MYH9 PE=1 SV=4 1 151.962 8.90537E-16 225.33 190.55 151.96 1 S FVVPRRMARKGAGDGSDEEVDGKADGAEAKP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPXXXXXXXX KGAGDGS(1)DEEVDGK KGAGDGS(151.96)DEEVDGK 7 3 2.3305E-05 353600 0 0 141430 0 0 359760 0 0 141510 0 0 333790 0 0 339680 0 0 347790 0 0 291010 0 0 153950 0 0 45126 0 0 334620 0 0 133600 0 0 361610 0 0 148480 0 0 340280 0 0 331110 0 0 348040 0 0 295150 0 0 160120 0 0 49227 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 538900000 538900000 0 0 NaN 886 547 1943 1943 1358;2061 1432;2180 1540;2348 1703;2615;2616;2617;2618 2348 2616 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9292 1540 1703 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8862 1540 1703 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8862 P35580 1956 P35580 P35580 Myosin-10 MYH10 sp|P35580|MYH10_HUMAN Myosin-10 OS=Homo sapiens GN=MYH10 PE=1 SV=3 1 82.8422 8.88772E-23 256.4 226.63 256.4 1 S SGRRQLHLEGASLELSDDDTESKTSDVNETQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPXXXXXXXX QLHLEGASLELS(1)DDDTESK QLHLEGAS(-82.84)LELS(82.84)DDDT(-88.27)ES(-116.95)K 12 3 0.086682 10564 0 0 15216 0 0 13887 0 0 15949 0 0 13858 0 0 12916 0 0 16368 0 0 15357 0 0 17889 0 0 123320 0 0 10009 0 0 14378 0 0 13797 0 0 16283 0 0 14102 0 0 13345 0 0 16582 0 0 19026 0 0 17587 0 0 116470 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 29245000 29245000 0 0 NaN 887 548 1956 1956 3065 3251 3478;3479 3853;3854;3855 3478 3853 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17910 3478 3853 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17910 3478 3853 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17910 P35580 1975 P35580 P35580 Myosin-10 MYH10 sp|P35580|MYH10_HUMAN Myosin-10 OS=Homo sapiens GN=MYH10 PE=1 SV=3 1 70.6599 0.00220386 98 88.642 98 1 S TESKTSDVNETQPPQSE______________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPXXXXXXXXXXXXXX TSDVNETQPPQS(1)E T(-90.26)S(-90.26)DVNET(-70.66)QPPQS(70.66)E 12 2 -2.4572 5001.9 0 0 5059.7 0 0 4190.6 0 0 5606.3 0 0 10281 0 0 4490.7 0 0 10960 0 0 7121.5 0 0 6429.2 0 0 4222 0 0 4730 0 0 4782.8 0 0 4342.2 0 0 5705.1 0 0 10079 0 0 4592 0 0 11000 0 0 7168.7 0 0 6535.8 0 0 4140.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 32973000 32973000 0 0 NaN 888 548 1975 1975 4910 5235 5578 6200 5578 6200 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7795 5578 6200 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7795 5578 6200 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7795 P35611 12 P35611 P35611 Alpha-adducin ADD1 sp|P35611|ADDA_HUMAN Alpha-adducin OS=Homo sapiens GN=ADD1 PE=1 SV=2 0.952955 13.0656 0.000142618 106.82 87.207 106.82 1 S ____MNGDSRAAVVTSPPPTTAPHKERYFDR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPXXXXXX AAVVT(0.047)S(0.953)PPPTTAPHK AAVVT(-13.07)S(13.07)PPPT(-67.23)T(-72.07)APHK 6 3 0.25799 21621 0 0 16751 0 0 22178 0 0 15354 0 0 18595 0 0 20004 0 0 18844 0 0 20203 0 0 18627 0 0 10864 0 0 20461 0 0 15816 0 0 22256 0 0 15925 0 0 19085 0 0 19866 0 0 19164 0 0 20584 0 0 18388 0 0 10697 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 96555000 96555000 0 0 NaN 889 549 12 12 90 96 104 117 104 117 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11069 104 117 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11069 104 117 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11069 P35611;P35612;Q9UEY8 726;713;693 P35611;P35612;Q9UEY8 P35611 Alpha-adducin;Beta-adducin;Gamma-adducin ADD1;ADD2;ADD3 sp|P35611|ADDA_HUMAN Alpha-adducin OS=Homo sapiens GN=ADD1 PE=1 SV=2;sp|P35612|ADDB_HUMAN Beta-adducin OS=Homo sapiens GN=ADD2 PE=1 SV=3;sp|Q9UEY8|ADDG_HUMAN Gamma-adducin OS=Homo sapiens GN=ADD3 PE=1 SV=1 0.975976 16.0879 0.0100199 79.974 18.414 73.435 1 S PGKSPSKKKKKFRTPSFLKKSKKKSDS____;PSKSPSKKKKKFRTPSFLKKNKKKEKVEA__;PSKSPSKKKKKFRTPSFLKKSKKKEKVES__ X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX FRT(0.024)PS(0.976)FLK FRT(-16.09)PS(16.09)FLK 5 3 -0.41259 67553 0 0 55476 0 0 68504 0 0 50081 0 0 37419 0 0 59450 0 0 44163 0 0 55060 0 0 54341 0 0 5613.5 0 0 63926 0 0 52375 0 0 68557 0 0 51901 0 0 39913 0 0 59128 0 0 44909 0 0 55568 0 0 53187 0 0 6560 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 440010000 440010000 0 0 NaN 890 549;550;2136 726;713;693 726 1315;4844 1386;5169 1492;5508 1654;6126 1492 1654 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19165 5508 6126 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15881 1492 1654 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19165 P35611 465 P35611 P35611 Alpha-adducin ADD1 sp|P35611|ADDA_HUMAN Alpha-adducin OS=Homo sapiens GN=ADD1 PE=1 SV=2 0.984458 18.017 1.67254E-07 168.29 135.85 168.29 1 S SGRGDEASEEGQNGSSPKSKTKWTKEDGHRT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPXXXXXXXXXXXXX GDEASEEGQNGS(0.016)S(0.984)PK GDEAS(-121.66)EEGQNGS(-18.02)S(18.02)PK 13 3 0.23217 10537 0 0 9066.3 0 0 11065 0 0 9462.1 0 0 6370.7 0 0 10909 0 0 6415.7 0 0 8217.6 0 0 10565 0 0 3003.6 0 0 9972.5 0 0 8566.8 0 0 11054 0 0 9714.5 0 0 6746.7 0 0 10842 0 0 6642 0 0 8437.7 0 0 10248 0 0 3018.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12307000 12307000 0 0 NaN 891 549 465 465 1386 1462 1571 1735 1571 1735 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6650 1571 1735 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6650 1571 1735 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6650 P35611 358 P35611 P35611 Alpha-adducin ADD1 sp|P35611|ADDA_HUMAN Alpha-adducin OS=Homo sapiens GN=ADD1 PE=1 SV=2 0.999963 44.3677 6.99874E-16 235.88 207.48 235.88 1 S LLNPEKYKAKSRSPGSPVGEGTGSPPKWQIG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPXXXX SPGS(1)PVGEGTGSPPK S(-44.37)PGS(44.37)PVGEGT(-70.54)GS(-81.94)PPK 4 2 0.29613 24989 0 0 27793 0 0 25446 0 0 25435 0 0 14075 0 0 22959 0 0 15476 0 0 21921 0 0 26171 0 0 4070.2 0 0 23648 0 0 26242 0 0 25460 0 0 26220 0 0 14985 0 0 23118 0 0 15978 0 0 22151 0 0 25369 0 0 4339.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 36026000 36026000 0 0 NaN 892 549 358 358 4113 4385 4675 5190 4675 5190 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10126 4675 5190 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10126 4675 5190 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10126 P35612 600 P35612 P35612 Beta-adducin ADD2 sp|P35612|ADDB_HUMAN Beta-adducin OS=Homo sapiens GN=ADD2 PE=1 SV=3 0.814257 6.44075 0.00691108 80.737 61.096 80.737 1 S TAPEEPGSPAKSAPASPVQSPAKEAETKSPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX S(0.185)APAS(0.814)PVQS(0.001)PAK S(-6.44)APAS(6.44)PVQS(-29.33)PAK 5 3 -0.056935 18174 0 0 13277 0 0 14996 0 0 13926 0 0 8756.3 0 0 16501 0 0 8792.4 0 0 11523 0 0 12329 0 0 2771.6 0 0 17186 0 0 12546 0 0 15207 0 0 14300 0 0 9258.2 0 0 16368 0 0 9045 0 0 11834 0 0 12015 0 0 2876.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6984200 6984200 0 0 NaN 893 550 600 600 3591 3817 4070 4525 4070 4525 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9449 4070 4525 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9449 4070 4525 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9449 P35658 678 P35658 P35658 Nuclear pore complex protein Nup214 NUP214 sp|P35658|NU214_HUMAN Nuclear pore complex protein Nup214 OS=Homo sapiens GN=NUP214 PE=1 SV=2 1 91.925 1.08781E-06 139.02 108.47 139.02 1 S VQKSPRITPPAAKPGSPQAKSLQPAVAEKQG X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPXXXXXXXXXXX ITPPAAKPGS(1)PQAK IT(-91.93)PPAAKPGS(91.93)PQAK 10 4 -0.15543 8248.8 0 0 13437 0 0 8449.1 0 0 13310 0 0 6103.7 0 0 9585.9 0 0 5500.8 0 0 9997.1 0 0 14804 0 0 1029.6 0 0 7806.2 0 0 12693 0 0 8466.4 0 0 13614 0 0 6332.8 0 0 9781.7 0 0 5883.1 0 0 10043 0 0 14213 0 0 1200.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 80549000 80549000 0 0 NaN 894 551 678 678 1967 2079 2243 2505 2243 2505 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12612 2243 2505 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12612 2243 2505 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12612 P35658 666 P35658 P35658 Nuclear pore complex protein Nup214 NUP214 sp|P35658|NU214_HUMAN Nuclear pore complex protein Nup214 OS=Homo sapiens GN=NUP214 PE=1 SV=2 0.999986 48.6505 3.27287E-08 171.19 156.31 171.19 1 S SAQGSSSPVPSMVQKSPRITPPAAKPGSPQA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX SAQGSSSPVPSMVQKS(1)PR S(-135.31)AQGS(-111.64)S(-105.98)S(-95.96)PVPS(-48.65)MVQKS(48.65)PR 16 3 0.97495 12719 0 0 27909 0 0 13781 0 0 28607 0 0 8477.2 0 0 13746 0 0 8235.6 0 0 18015 0 0 30850 0 0 11576 0 0 12039 0 0 26369 0 0 13750 0 0 29092 0 0 8933.8 0 0 14516 0 0 9014.1 0 0 18253 0 0 29481 0 0 11317 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22341000 22341000 0 0 NaN 895 551 666 666 3596 3823 4076 4532 4076 4532 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12204 4076 4532 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12204 4076 4532 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12204 P35658 430 P35658 P35658 Nuclear pore complex protein Nup214 NUP214 sp|P35658|NU214_HUMAN Nuclear pore complex protein Nup214 OS=Homo sapiens GN=NUP214 PE=1 SV=2 0.793592 6.48526 3.74215E-07 142.97 121.67 142.97 1 S KTPERLSLEGERQPKSPGSTPTTPTSSQAPQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.794)PGS(0.178)T(0.028)PT(0.001)TPTSSQAPQK S(6.49)PGS(-6.49)T(-14.59)PT(-31.4)T(-53.96)PT(-81.21)S(-87.21)S(-93.63)QAPQK 1 3 0.067305 18654 0 0 25809 0 0 18988 0 0 31188 0 0 19833 0 0 20221 0 0 18957 0 0 22379 0 0 33496 0 0 5786.6 0 0 17653 0 0 24412 0 0 19109 0 0 31518 0 0 20078 0 0 20796 0 0 19737 0 0 22539 0 0 32434 0 0 5966.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 57583000 57583000 0 0 NaN 896 551 430 430 4114 4386;4387 4677 5192 4677 5192 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9297 4677 5192 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9297 4677 5192 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9297 P35658 433 P35658 P35658 Nuclear pore complex protein Nup214 NUP214 sp|P35658|NU214_HUMAN Nuclear pore complex protein Nup214 OS=Homo sapiens GN=NUP214 PE=1 SV=2 0.7757 6.97128 2.58738E-05 134.29 112.24 134.29 2 S ERLSLEGERQPKSPGSTPTTPTSSQAPQKLD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPXX S(0.06)PGS(0.776)T(0.156)PT(0.014)T(0.992)PT(0.002)SSQAPQK S(-11.1)PGS(6.97)T(-6.97)PT(-19.74)T(22.72)PT(-26.51)S(-41.36)S(-48.55)QAPQK 4 3 -0.42928 0 21233 0 0 27181 0 0 21045 0 0 27146 0 0 17398 0 0 22581 0 0 17110 0 0 22650 0 0 27394 0 0 13745 0 0 20091 0 0 25676 0 0 21157 0 0 27802 0 0 17877 0 0 22865 0 0 17712 0 0 23131 0 0 26593 0 0 13467 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 185950000 0 185950000 0 NaN 897 551 433 433 4114 4386;4387 4678 5193;5194 4678 5193 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9229 4678 5193 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9229 4678 5193 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9229 P35658 646 P35658 P35658 Nuclear pore complex protein Nup214 NUP214 sp|P35658|NU214_HUMAN Nuclear pore complex protein Nup214 OS=Homo sapiens GN=NUP214 PE=1 SV=2 0.823807 6.70001 0.0249437 61.523 49.297 61.523 1 S SAPPSSVPLKSSVLPSPSGRSAQGSSSPVPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX SSVLPS(0.824)PS(0.176)GR S(-47.62)S(-41.97)VLPS(6.7)PS(-6.7)GR 6 2 -1.2757 15048 0 0 16356 0 0 15260 0 0 15177 0 0 12910 0 0 15202 0 0 13869 0 0 15524 0 0 16931 0 0 6260.1 0 0 14240 0 0 15444 0 0 15327 0 0 15656 0 0 13256 0 0 15252 0 0 14155 0 0 15747 0 0 16576 0 0 6253.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9031800 9031800 0 0 NaN 898 551 646 646 4492 4784 5095 5654 5095 5654 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11887 5095 5654 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11887 5095 5654 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11887 P35658 940 P35658 P35658 Nuclear pore complex protein Nup214 NUP214 sp|P35658|NU214_HUMAN Nuclear pore complex protein Nup214 OS=Homo sapiens GN=NUP214 PE=1 SV=2 1 88.8027 0.00410102 88.803 67.253 88.803 1 S IESHTKSLPKVPAKLSPMKQAQLRNFLAKRK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX VPAKLS(1)PMK VPAKLS(88.8)PMK 6 3 -0.3804 45332 0 0 66232 0 0 46219 0 0 65000 0 0 46546 0 0 44092 0 0 50021 0 0 54308 0 0 68628 0 0 5418.3 0 0 42899 0 0 62560 0 0 46499 0 0 66479 0 0 47282 0 0 45267 0 0 51260 0 0 54242 0 0 66926 0 0 6358.9 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 136290000 136290000 0 0 NaN 899 551 940 940 5200 5543;5544 5907;5908 6564;6565 5908 6565 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15374 5908 6565 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15374 5908 6565 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15374 P35659 72 P35659 P35659 Protein DEK DEK sp|P35659|DEK_HUMAN Protein DEK OS=Homo sapiens GN=DEK PE=1 SV=1 0.826686 6.7851 0.000317326 112.44 71.71 112.44 1 S KREKKKVERLTMQVSSLQREPFTIAQGKGQK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX LTMQVS(0.173)S(0.827)LQR LT(-61.15)MQVS(-6.79)S(6.79)LQR 7 2 0.071813 21091 0 0 13600 0 0 21546 0 0 11513 0 0 13553 0 0 21468 0 0 12246 0 0 16479 0 0 15268 0 0 7278.6 0 0 19960 0 0 12836 0 0 21569 0 0 12109 0 0 14210 0 0 21025 0 0 12611 0 0 16942 0 0 14937 0 0 7235 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16670000 16670000 0 0 NaN 900 552 72 72 2625 2772 2973 3310 2973 3310 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16042 2973 3310 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16042 2973 3310 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16042 P35659 51 P35659 P35659 Protein DEK DEK sp|P35659|DEK_HUMAN Protein DEK OS=Homo sapiens GN=DEK PE=1 SV=1 1 94.6917 0.00625956 94.692 8.9611 94.692 1 S EDEDDEEEEEEEKEKSLIVEGKREKKKVERL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX S(1)LIVEGK S(94.69)LIVEGK 1 2 -0.37476 30226 0 0 17880 0 0 30322 0 0 17689 0 0 12486 0 0 33075 0 0 12456 0 0 22418 0 0 19609 0 0 4914.5 0 0 28602 0 0 16890 0 0 30309 0 0 18422 0 0 13730 0 0 32341 0 0 12877 0 0 23048 0 0 19044 0 0 5146.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22705000 22705000 0 0 NaN 901 552 51 51 3944 4203 4485 4985 4485 4985 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15380 4485 4985 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15380 4485 4985 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15380 P36578 295 P36578 P36578 60S ribosomal protein L4 RPL4 sp|P36578|RL4_HUMAN 60S ribosomal protein L4 OS=Homo sapiens GN=RPL4 PE=1 SV=5 1 126.832 0.000132475 126.83 84.023 126.83 1 S PMHKMINTDLSRILKSPEIQRALRAPRKKIH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX ILKS(1)PEIQR ILKS(126.83)PEIQR 4 3 0.1034 16496 0 0 18862 0 0 17515 0 0 19343 0 0 12303 0 0 16181 0 0 10844 0 0 16529 0 0 20309 0 0 2072.7 0 0 15613 0 0 17821 0 0 17512 0 0 19781 0 0 12782 0 0 16369 0 0 11368 0 0 16629 0 0 19637 0 0 2334.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 158810000 158810000 0 0 NaN 902 556 295 295 1884 1988 2146 2405 2146 2405 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14026 2146 2405 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14026 2146 2405 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14026 P36871 117 P36871 P36871 Phosphoglucomutase-1 PGM1 sp|P36871|PGM1_HUMAN Phosphoglucomutase-1 OS=Homo sapiens GN=PGM1 PE=1 SV=3 0.991611 20.7263 1.65846E-18 246.21 219.15 246.21 1 S IIRKIKAIGGIILTASHNPGGPNGDFGIKFN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPPPPXX AIGGIILT(0.008)AS(0.992)HNPGGPNGDFGIK AIGGIILT(-20.73)AS(20.73)HNPGGPNGDFGIK 10 4 0.030821 7565 0 0 2755.9 0 0 6743.2 0 0 2039.9 0 0 4395.8 0 0 6615.5 0 0 2513.5 0 0 5352.6 0 0 2818.4 0 0 38323 0 0 7155.4 0 0 2599.4 0 0 6804.9 0 0 2211.7 0 0 4573.2 0 0 6483.2 0 0 2657.3 0 0 6572.7 0 0 2767.9 0 0 36210 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 68151000 68151000 0 0 NaN 903 558 117 117 249 266 284 315 284 315 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21396 284 315 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21396 284 315 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21396 P37802;Q9UI15 185;185 P37802 P37802 Transgelin-2;Transgelin-3 TAGLN2;TAGLN3 sp|P37802|TAGL2_HUMAN Transgelin-2 OS=Homo sapiens GN=TAGLN2 PE=1 SV=3;sp|Q9UI15|TAGL3_HUMAN Transgelin-3 OS=Homo sapiens GN=TAGLN3 PE=1 SV=2 0.696468 3.70529 0.00960894 85.734 66.659 85.734 1 S GKNVIGLQMGTNRGASQAGMTGYGMPRQIL_ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX GAS(0.696)QAGMT(0.297)GY(0.007)GMPR GAS(3.71)QAGMT(-3.71)GY(-20.11)GMPR 3 2 -1.3555 17314 0 0 15248 0 0 20071 0 0 14309 0 0 24948 0 0 21041 0 0 27940 0 0 23852 0 0 16673 0 0 24445 0 0 16394 0 0 14399 0 0 20117 0 0 14857 0 0 25061 0 0 20871 0 0 27988 0 0 24553 0 0 16929 0 0 23570 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21130000 21130000 0 0 NaN 904 559 185 185 1374 1449 1557 1721 1557 1721 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13297 1557 1721 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13297 1557 1721 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13297 P37802 163 P37802 P37802 Transgelin-2 TAGLN2 sp|P37802|TAGL2_HUMAN Transgelin-2 OS=Homo sapiens GN=TAGLN2 PE=1 SV=3 1 146.586 1.52244E-07 169.3 135.43 146.59 1 S PNWFPKKSKENPRNFSDNQLQEGKNVIGLQM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX NFS(1)DNQLQEGK NFS(146.59)DNQLQEGK 3 2 0.2304 40679 0 0 70943 0 0 41443 0 0 70301 0 0 89956 0 0 39996 0 0 92661 0 0 72745 0 0 79157 0 0 21438 0 0 38496 0 0 67013 0 0 42286 0 0 71735 0 0 88449 0 0 41893 0 0 93821 0 0 72345 0 0 78677 0 0 21870 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 518950000 518950000 0 0 NaN 905 559 163 163 2808 2978 3190;3191 3542;3543 3191 3543 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13481 3190 3542 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13477 3190 3542 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13477 P37837 4 P37837 P37837 Transaldolase TALDO1 sp|P37837|TALDO_HUMAN Transaldolase OS=Homo sapiens GN=TALDO1 PE=1 SV=2 0.599354 4.75952 0.0173423 45.68 30.459 45.68 1 S ____________MSSSPVKRQRMESALDQLK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX S(0.2)S(0.2)S(0.599)PVKR S(-4.76)S(-4.76)S(4.76)PVKR 3 2 0.34862 22596 0 0 31451 0 0 23902 0 0 32026 0 0 17880 0 0 21476 0 0 17247 0 0 25185 0 0 33100 0 0 3210.1 0 0 21386 0 0 29714 0 0 23918 0 0 32679 0 0 18506 0 0 22050 0 0 18020 0 0 25216 0 0 31987 0 0 3605.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 204550000 204550000 0 0 NaN 906 560 4 4 4453 4744 5049 5601 5049 5601 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5854 5049 5601 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5854 5049 5601 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5854 P38159;Q96E39 326;326 P38159;Q96E39 P38159 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 RBMX;RBMXL1 sp|P38159|RBMX_HUMAN RNA-binding motif protein, X chromosome OS=Homo sapiens GN=RBMX PE=1 SV=3;sp|Q96E39|RMXL1_HUMAN RNA binding motif protein, X-linked-like-1 OS=Homo sapiens GN=RBMXL1 PE=1 SV=1 0.999599 36.4088 6.87329E-07 146.67 112.87 146.67 1 S DDYSSSRDGYGGSRDSYSSSRSDLYSSCDRV;DDYSSSRDGYGGSRDSYSSSRSDLYSSGRDR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPXXXXXXXXXX DGYGGSRDS(1)YSSSR DGY(-100.26)GGS(-36.41)RDS(36.41)Y(-75.59)S(-37.7)S(-55.8)S(-69.53)R 9 3 0.49528 8343 0 0 12049 0 0 9460 0 0 10747 0 0 10371 0 0 8794.9 0 0 10923 0 0 10195 0 0 11203 0 0 3250.3 0 0 7898.8 0 0 11375 0 0 9473.7 0 0 11083 0 0 10479 0 0 8926.4 0 0 11100 0 0 10270 0 0 11043 0 0 3296.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 47244000 47244000 0 0 NaN 907 561;1669 326;326 326 694 738 788 870 788 870 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6268 788 870 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6268 788 870 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6268 P38159;Q96E39 208;208 P38159;Q96E39 P38159 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 RBMX;RBMXL1 sp|P38159|RBMX_HUMAN RNA-binding motif protein, X chromosome OS=Homo sapiens GN=RBMX PE=1 SV=3;sp|Q96E39|RMXL1_HUMAN RNA binding motif protein, X-linked-like-1 OS=Homo sapiens GN=RBMXL1 PE=1 SV=1 1 82.1088 5.41646E-07 152.89 123.55 152.89 1 S PPRREPLPSRRDVYLSPRDDGYSTKDSYSSR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPXXXXXX DVYLS(1)PRDDGYSTK DVY(-83.63)LS(82.11)PRDDGY(-89.71)S(-82.11)T(-88.44)K 5 3 0.24748 102660 0 0 132670 0 0 99661 0 0 137620 0 0 108760 0 0 98682 0 0 118080 0 0 117430 0 0 132300 0 0 46803 0 0 97135 0 0 125350 0 0 100660 0 0 140370 0 0 109980 0 0 100970 0 0 120140 0 0 118480 0 0 129940 0 0 46789 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 2993900000 2993900000 0 0 NaN 908 561;1669 208;208 208 847;848;3219 896;897;3413 952;953;3647 1048;1049;1050;1051;4044 953 1050 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14409 953 1050 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14409 953 1050 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14409 P38159 352 P38159 P38159 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed RBMX sp|P38159|RBMX_HUMAN RNA-binding motif protein, X chromosome OS=Homo sapiens GN=RBMX PE=1 SV=3 1 132.875 0.000274133 132.88 83.457 132.88 1 S SGRDRVGRQERGLPPSMERGYPPPRDSYSSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX GLPPS(1)MER GLPPS(132.88)MER 5 2 -0.41619 540900 0 0 796670 0 0 522550 0 0 790840 0 0 686140 0 0 546270 0 0 708580 0 0 689460 0 0 838670 0 0 38033 0 0 511760 0 0 752550 0 0 529280 0 0 808440 0 0 687080 0 0 560330 0 0 723760 0 0 687180 0 0 822000 0 0 51770 0 0 12 0 0 12 0 0 12 0 0 12 0 0 12 0 0 12 0 0 12 0 0 12 0 0 12 0 0 12 0 0 350050000 350050000 0 0 NaN 909 561 352 352 1507 1586;1587 1715;1716 1897;1898;1899;1900;1901;1902;1903;1904;1905;1906;1907;1908 1716 1903 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11450 1716 1903 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11450 1716 1903 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11450 P38159 88 P38159 P38159 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed RBMX sp|P38159|RBMX_HUMAN RNA-binding motif protein, X chromosome OS=Homo sapiens GN=RBMX PE=1 SV=3 0.990956 20.438 5.28704E-07 145.43 124.67 145.43 1 S SLDGKAIKVEQATKPSFESGRRGPPPPPRSR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPXXXXXXXXXX VEQATKPS(0.991)FES(0.009)GR VEQAT(-40.66)KPS(20.44)FES(-20.44)GR 8 3 -0.50968 27002 0 0 33348 0 0 26773 0 0 33376 0 0 24169 0 0 23289 0 0 22206 0 0 28524 0 0 36981 0 0 6584.4 0 0 25550 0 0 31502 0 0 26936 0 0 34106 0 0 24667 0 0 23872 0 0 23102 0 0 28607 0 0 35862 0 0 6860.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 162310000 162310000 0 0 NaN 910 561 88 88 5098 5435 5788 6433 5788 6433 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11616 5788 6433 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11616 5788 6433 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11616 P38398 1524 P38398 P38398 Breast cancer type 1 susceptibility protein BRCA1 sp|P38398|BRCA1_HUMAN Breast cancer type 1 susceptibility protein OS=Homo sapiens GN=BRCA1 PE=1 SV=2 0.999278 31.4085 0.0194524 64.045 38.66 64.045 1 S YMHSCSGSLQNRNYPSQEELIKVVDVEEQQL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX NY(0.001)PS(0.999)QEELIK NY(-31.41)PS(31.41)QEELIK 4 2 -0.81816 17627 0 0 13687 0 0 18357 0 0 13344 0 0 14145 0 0 18507 0 0 18516 0 0 17964 0 0 14499 0 0 20746 0 0 16682 0 0 12927 0 0 18399 0 0 13805 0 0 14661 0 0 18352 0 0 18528 0 0 18666 0 0 14476 0 0 19951 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19994000 19994000 0 0 NaN 911 562 1524 1524 2968 3147 3369 3734 3369 3734 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15745 3369 3734 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15745 3369 3734 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15745 P38398 1497 P38398 P38398 Breast cancer type 1 susceptibility protein BRCA1 sp|P38398|BRCA1_HUMAN Breast cancer type 1 susceptibility protein OS=Homo sapiens GN=BRCA1 PE=1 SV=2 0.550633 0.89556 0.00684506 80.706 53.924 80.706 1 S DSSTSKNKEPGVERSSPSKCPSLDDRWYMHS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPXXXXX S(0.448)S(0.551)PS(0.001)KCPSLDDR S(-0.9)S(0.9)PS(-26.21)KCPS(-44.87)LDDR 2 3 0.49411 24532 0 0 18689 0 0 21494 0 0 20888 0 0 21042 0 0 24694 0 0 17089 0 0 21503 0 0 17747 0 0 5351.4 0 0 23203 0 0 17667 0 0 21805 0 0 21374 0 0 21325 0 0 24552 0 0 17603 0 0 21854 0 0 17483 0 0 5536.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17511000 17511000 0 0 NaN 912 562 1497 1497 4398 4686 4990 5537 4990 5537 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8987 4990 5537 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8987 4990 5537 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8987 P38432 566 P38432 P38432 Coilin COIL sp|P38432|COIL_HUMAN Coilin OS=Homo sapiens GN=COIL PE=1 SV=1 0.813588 6.39936 1.10936E-06 145.29 124.96 145.29 1 S TVFWKELIDPRLIIESPSNTSSTEPA_____ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPXXXXX LIIES(0.814)PS(0.186)NTSSTEPA LIIES(6.4)PS(-6.4)NT(-56.11)S(-89.73)S(-89.73)T(-89.73)EPA 5 2 -0.1042 8131 0 0 11060 0 0 7384.8 0 0 9323.9 0 0 9989.2 0 0 7905.9 0 0 9170.7 0 0 10477 0 0 11668 0 0 45646 0 0 7691.2 0 0 10438 0 0 7509.3 0 0 9656.6 0 0 9974.1 0 0 8106 0 0 9442.7 0 0 11785 0 0 11406 0 0 43223 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 133340000 133340000 0 0 NaN 913 563 566 566 2407 2544 2737 3057 2737 3057 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18557 2737 3057 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18557 2737 3057 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18557 P38432 271 P38432 P38432 Coilin COIL sp|P38432|COIL_HUMAN Coilin OS=Homo sapiens GN=COIL PE=1 SV=1 0.965592 14.4813 7.71705E-11 176.85 137.52 176.85 1 S SISDGPSKVTLEARNSSEKLPTELSKEEPST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPXXXXX NS(0.966)S(0.034)EKLPTELSK NS(14.48)S(-14.48)EKLPT(-79.73)ELS(-129.96)K 2 3 0.085605 21294 0 0 32118 0 0 24677 0 0 30957 0 0 19064 0 0 19973 0 0 21584 0 0 25195 0 0 32478 0 0 7979.3 0 0 20162 0 0 30334 0 0 24590 0 0 31680 0 0 19724 0 0 20591 0 0 22148 0 0 25311 0 0 31584 0 0 8096.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 107470000 107470000 0 0 NaN 914 563 271 271 2937 3115 3335 3697 3335 3697 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14827 3335 3697 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14827 3335 3697 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14827 P39880 1496 P39880 P39880 Homeobox protein cut-like 1 CUX1 sp|P39880|CUX1_HUMAN Homeobox protein cut-like 1 OS=Homo sapiens GN=CUX1 PE=1 SV=3 1 127.07 7.19377E-05 127.07 112.81 127.07 1 S AANLNSIIHRLEKAASREEPIEWEF______ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX AAS(1)REEPIEWEF AAS(127.07)REEPIEWEF 3 2 -0.17048 7836.5 0 0 6616.2 0 0 7829.4 0 0 6929.2 0 0 11728 0 0 8698.7 0 0 10851 0 0 9896 0 0 8299.6 0 0 20114 0 0 7415.3 0 0 6251.9 0 0 7930.2 0 0 7124 0 0 11656 0 0 8693.1 0 0 11018 0 0 10486 0 0 8297.5 0 0 19169 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26005000 26005000 0 0 NaN 915 568 1496 1496 75 80 88 101 88 101 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22336 88 101 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22336 88 101 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22336 P39880 1270 P39880 P39880 Homeobox protein cut-like 1 CUX1 sp|P39880|CUX1_HUMAN Homeobox protein cut-like 1 OS=Homo sapiens GN=CUX1 PE=1 SV=3 0.933189 11.4627 0.00903234 72.898 53.827 72.898 1 S EKEALKRAYQQKPYPSPKTIEDLATQLNLKT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX AYQQKPY(0.067)PS(0.933)PK AY(-37.22)QQKPY(-11.46)PS(11.46)PK 9 3 -1.4821 20971 0 0 26186 0 0 22504 0 0 21860 0 0 24714 0 0 24899 0 0 30717 0 0 27002 0 0 26235 0 0 6735.4 0 0 19849 0 0 24712 0 0 22611 0 0 22758 0 0 25030 0 0 24861 0 0 30856 0 0 27206 0 0 26076 0 0 6967.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25711000 25711000 0 0 NaN 916 568 1270 1270 588 626 667 742 667 742 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11500 667 742 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11500 667 742 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11500 P39880 1454 P39880 P39880 Homeobox protein cut-like 1 CUX1 sp|P39880|CUX1_HUMAN Homeobox protein cut-like 1 OS=Homo sapiens GN=CUX1 PE=1 SV=3 0.918135 10.4981 1.5754E-09 175.83 143.92 175.83 1 S PPPSNSSSSSAPRRPSSLQSLFGLPEAAGAR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RPS(0.918)S(0.082)LQSLFGLPEAAGAR RPS(10.5)S(-10.5)LQS(-62.23)LFGLPEAAGAR 3 3 -1.1656 3541.6 0 0 2310.6 0 0 2809.3 0 0 2545.4 0 0 3574.1 0 0 3542.7 0 0 2839.7 0 0 4321.4 0 0 3369.2 0 0 8392.1 0 0 3348.5 0 0 2184.1 0 0 2878.9 0 0 2615.3 0 0 3572 0 0 3532 0 0 2940.3 0 0 4557.3 0 0 3301.9 0 0 8002.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16516000 16516000 0 0 NaN 917 568 1454 1454 3413 3625 3867 4293 3867 4293 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22321 3867 4293 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22321 3867 4293 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22321 P39880 1455 P39880 P39880 Homeobox protein cut-like 1 CUX1 sp|P39880|CUX1_HUMAN Homeobox protein cut-like 1 OS=Homo sapiens GN=CUX1 PE=1 SV=3 0.523305 0.406059 2.89149E-07 139.45 108.91 139.45 1 S PPSNSSSSSAPRRPSSLQSLFGLPEAAGARD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPX RPS(0.477)S(0.523)LQSLFGLPEAAGAR RPS(-0.41)S(0.41)LQS(-37.16)LFGLPEAAGAR 4 3 0.62969 4199.4 0 0 3150.9 0 0 4317.9 0 0 4255.2 0 0 6623.3 0 0 4022.8 0 0 5481.7 0 0 5256 0 0 4389.3 0 0 12325 0 0 3974.1 0 0 2982.8 0 0 4367.2 0 0 4298 0 0 6568 0 0 4081.3 0 0 5604.8 0 0 5595.7 0 0 4377.3 0 0 11727 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21044000 21044000 0 0 NaN 918 568 1455 1455 3413 3625 3866 4292 3866 4292 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21565 3866 4292 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21565 3866 4292 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21565 P40222 515 P40222 P40222 Alpha-taxilin TXLNA sp|P40222|TXLNA_HUMAN Alpha-taxilin OS=Homo sapiens GN=TXLNA PE=1 SV=3 0.808903 6.26642 7.89992E-05 125.23 92.001 125.23 1 S GPERRPEGPGAQAPSSPRVTEAPCYPGAPST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPXXXXXXXXXXXXX RPEGPGAQAPS(0.191)S(0.809)PR RPEGPGAQAPS(-6.27)S(6.27)PR 12 3 -0.28291 8392.2 0 0 9351.2 0 0 8615.5 0 0 9066.1 0 0 7089.3 0 0 7481.7 0 0 7005.5 0 0 8568.4 0 0 9532.4 0 0 2134.6 0 0 7942 0 0 8832.1 0 0 8643.6 0 0 9300.7 0 0 7285.5 0 0 7587.6 0 0 7204.2 0 0 8616.9 0 0 9298.5 0 0 2208.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 688790000 688790000 0 0 NaN 919 570 515 515 3382 3591 3831 4254 3831 4254 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5967 3831 4254 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5967 3831 4254 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5967 P40763 727 P40763 P40763 Signal transducer and activator of transcription 3 STAT3 sp|P40763|STAT3_HUMAN Signal transducer and activator of transcription 3 OS=Homo sapiens GN=STAT3 PE=1 SV=2 1 64.1722 4.33338E-11 181.11 164.93 181.11 1 S CVTPTTCSNTIDLPMSPRTLDSLMQFGNNGE X;X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX FICVTPTTCSNTIDLPMS(1)PR FICVT(-148.56)PT(-143.74)T(-136.23)CS(-95.23)NT(-64.17)IDLPMS(64.17)PR 18 3 -0.81718 12367 0 0 10878 0 0 13030 0 0 10981 0 0 12301 0 0 13180 0 0 13216 0 0 12880 0 0 10441 0 0 45753 0 0 11705 0 0 10277 0 0 13075 0 0 11304 0 0 12536 0 0 13195 0 0 13333 0 0 14310 0 0 10420 0 0 43380 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 165900000 165900000 0 0 NaN 920 571 727 727 1276 1344;1345 1446;1447 1603;1604;1605 1446 1603 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20705 1446 1603 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20705 1446 1603 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20705 P40818 718 P40818 P40818 Ubiquitin carboxyl-terminal hydrolase 8 USP8 sp|P40818|UBP8_HUMAN Ubiquitin carboxyl-terminal hydrolase 8 OS=Homo sapiens GN=USP8 PE=1 SV=1 0.895893 11.9778 6.31588E-11 186.96 159.91 186.96 1 S PAERDREPSKLKRSYSSPDITQAIQEEEKRK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPX RS(0.047)YS(0.896)S(0.057)PDITQAIQEEEKR RS(-12.77)Y(-67.21)S(11.98)S(-11.98)PDIT(-83.71)QAIQEEEKR 4 4 0.44139 25934 0 0 45287 0 0 26216 0 0 45636 0 0 34934 0 0 27212 0 0 32870 0 0 34431 0 0 44122 0 0 14706 0 0 24541 0 0 42783 0 0 26484 0 0 46540 0 0 34918 0 0 28216 0 0 33866 0 0 34701 0 0 43058 0 0 14645 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 38841000 38841000 0 0 NaN 921 572 718 718 3514;4602;4603 3731;4908;4909 3977;5228 4416;5806 3977 4416 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15436 3977 4416 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15436 3977 4416 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15436 P40818 719 P40818 P40818 Ubiquitin carboxyl-terminal hydrolase 8 USP8 sp|P40818|UBP8_HUMAN Ubiquitin carboxyl-terminal hydrolase 8 OS=Homo sapiens GN=USP8 PE=1 SV=1 0.596567 1.71342 7.6836E-16 222.62 202.37 222.62 1 S AERDREPSKLKRSYSSPDITQAIQEEEKRKP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPXX S(0.001)YS(0.402)S(0.597)PDITQAIQEEEKR S(-26.51)Y(-99.22)S(-1.71)S(1.71)PDIT(-45.33)QAIQEEEKR 4 3 -0.20064 24339 0 0 23704 0 0 28690 0 0 24197 0 0 16807 0 0 28457 0 0 16855 0 0 23801 0 0 26109 0 0 17496 0 0 23047 0 0 22395 0 0 28494 0 0 24883 0 0 17767 0 0 28308 0 0 17408 0 0 24582 0 0 25369 0 0 17025 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 199310000 199310000 0 0 NaN 922 572 719 719 3514;4602;4603 3731;4908;4909 5229 5807 5229 5807 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17289 5229 5807 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17289 5229 5807 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17289 P40855 147 P40855 P40855 Peroxisomal biogenesis factor 19 PEX19 sp|P40855|PEX19_HUMAN Peroxisomal biogenesis factor 19 OS=Homo sapiens GN=PEX19 PE=1 SV=1 0.817379 6.53651 7.64786E-05 109.85 90.298 109.85 1 S TLSGLAKNATDLQNSSMSEEELTKAMEGLGM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPXXXXXXX NATDLQNS(0.181)S(0.817)MS(0.001)EEELTK NAT(-46.62)DLQNS(-6.54)S(6.54)MS(-28.53)EEELT(-67.98)K 9 3 -1.8513 45095 0 0 65134 0 0 47645 0 0 66873 0 0 46471 0 0 46732 0 0 40741 0 0 57669 0 0 70637 0 0 35810 0 0 42681 0 0 61539 0 0 47804 0 0 68234 0 0 47176 0 0 47945 0 0 42564 0 0 58501 0 0 68429 0 0 35054 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 48308000 48308000 0 0 NaN 923 573 147 147 2782 2951 3161 3511;3512 3161 3511 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15021 3161 3511 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15021 3161 3511 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15021 P40925 241 P40925 P40925 Malate dehydrogenase, cytoplasmic MDH1 sp|P40925|MDHC_HUMAN Malate dehydrogenase, cytoplasmic OS=Homo sapiens GN=MDH1 PE=1 SV=4 0.768798 5.21821 1.83218E-06 151.49 120.26 151.49 1 S TVQQRGAAVIKARKLSSAMSAAKAICDHVRD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX KLS(0.769)S(0.231)AMSAAK KLS(5.22)S(-5.22)AMS(-69.01)AAK 3 3 -0.61138 28117 0 0 45315 0 0 33804 0 0 45788 0 0 58748 0 0 31859 0 0 59468 0 0 47187 0 0 54692 0 0 5304 0 0 26627 0 0 42810 0 0 34018 0 0 46761 0 0 58150 0 0 32758 0 0 60368 0 0 46898 0 0 54167 0 0 6086.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 61516000 61516000 0 0 NaN 924 574 241 241 2134 2255 2428 2705 2428 2705 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13707 2428 2705 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13707 2428 2705 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13707 P40939 756 P40939 P40939 Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase HADHA sp|P40939|ECHA_HUMAN Trifunctional enzyme subunit alpha, mitochondrial OS=Homo sapiens GN=HADHA PE=1 SV=2 1 109.479 7.42744E-11 182.41 163.91 182.41 1 S GKQFTPCQLLADHANSPNKKFYQ________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPXXXXXXXXXXX QFTPCQLLADHANS(1)PNKK QFT(-109.48)PCQLLADHANS(109.48)PNKK 14 4 -0.38908 5861.2 0 0 9249.9 0 0 6903.9 0 0 8658.7 0 0 10193 0 0 6427.3 0 0 10619 0 0 9857.7 0 0 9698.6 0 0 5554 0 0 5550.1 0 0 8734.7 0 0 6932.9 0 0 8890.7 0 0 10155 0 0 6595.4 0 0 10763 0 0 9922.4 0 0 9608.6 0 0 5457.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15711000 15711000 0 0 NaN 925 575 756 756 3028 3209 3432 3805 3432 3805 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16941 3432 3805 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16941 3432 3805 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16941 P41212 213 P41212 P41212 Transcription factor ETV6 ETV6 sp|P41212|ETV6_HUMAN Transcription factor ETV6 OS=Homo sapiens GN=ETV6 PE=1 SV=1 1 71.0303 0.0138891 71.03 34.445 71.03 1 S QRPLRSPLDNMIRRLSPAERAQGPRPHQENN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX RLS(1)PAER RLS(71.03)PAER 3 3 -0.20699 17177 0 0 9836 0 0 20262 0 0 10644 0 0 15642 0 0 16793 0 0 15755 0 0 14183 0 0 10278 0 0 3129.7 0 0 16265 0 0 9296.3 0 0 20169 0 0 10978 0 0 16143 0 0 16531 0 0 15882 0 0 14422 0 0 10374 0 0 3275.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21575000 21575000 0 0 NaN 926 577 213 213 3336 3538 3775 4191 3775 4191 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6427 3775 4191 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6427 3775 4191 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6427 P41212 271 P41212 P41212 Transcription factor ETV6 ETV6 sp|P41212|ETV6_HUMAN Transcription factor ETV6 OS=Homo sapiens GN=ETV6 PE=1 SV=1 1 50.5386 0.0345775 50.539 32.622 50.539 1 S SSPRQESTRVIQLMPSPIMHPLILNPRHSVD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPXXXX VIQLMPS(1)PIMHPLILNPR VIQLMPS(50.54)PIMHPLILNPR 7 3 -0.12175 6508.8 0 0 5662.9 0 0 6935.6 0 0 4695.9 0 0 6179.8 0 0 7130.3 0 0 7850.4 0 0 7133.2 0 0 4691.3 0 0 29599 0 0 6160.6 0 0 5344.1 0 0 6953.1 0 0 4919.7 0 0 6336.5 0 0 7094.2 0 0 7824.3 0 0 8046.8 0 0 4762.8 0 0 28036 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20328000 20328000 0 0 NaN 927 577 271 271 5138 5475 5832 6483 5832 6483 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23718 5832 6483 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23718 5832 6483 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23718 P41227 186 P41227 P41227 N-alpha-acetyltransferase 10 NAA10 sp|P41227|NAA10_HUMAN N-alpha-acetyltransferase 10 OS=Homo sapiens GN=NAA10 PE=1 SV=1 0.990051 20.4733 0.00242274 95.034 71.554 95.034 1 S VVLGAIENKVESKGNSPPSSGEACREEKGLA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX GNS(0.99)PPS(0.009)S(0.001)GEACREEK GNS(20.47)PPS(-20.47)S(-29.66)GEACREEK 3 3 -0.13356 12851 0 0 20615 0 0 12662 0 0 17797 0 0 18380 0 0 13907 0 0 18964 0 0 17483 0 0 21166 0 0 2241.2 0 0 12160 0 0 19458 0 0 12832 0 0 18383 0 0 18325 0 0 14162 0 0 19336 0 0 17465 0 0 20792 0 0 2515 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 138750000 138750000 0 0 NaN 928 578 186 186 1533 1614 1743 1936 1743 1936 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6558 1743 1936 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6558 1743 1936 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6558 P41229 897 P41229 P41229 Lysine-specific demethylase 5C KDM5C sp|P41229|KDM5C_HUMAN Lysine-specific demethylase 5C OS=Homo sapiens GN=KDM5C PE=1 SV=2 0.990221 20.0551 6.53422E-08 164.27 107.32 164.27 1 S AYQAEAREALASLPSSPGLLQSLLERGRQLG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPXXXXX EALASLPS(0.01)S(0.99)PGLLQSLLER EALAS(-83.42)LPS(-20.06)S(20.06)PGLLQS(-57.84)LLER 9 3 -0.67055 3701.2 0 0 5816.7 0 0 5280.1 0 0 6733.1 0 0 7039.8 0 0 4215.2 0 0 7180.1 0 0 6692.6 0 0 7358.6 0 0 25803 0 0 3508.2 0 0 5500.1 0 0 5247.8 0 0 6817 0 0 7042.3 0 0 4417.2 0 0 7306.9 0 0 7394.7 0 0 7253.2 0 0 24452 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30880000 30880000 0 0 NaN 929 579 897 897 876 929 1006 1112 1006 1112 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24005 1006 1112 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24005 1006 1112 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24005 P41229 317 P41229 P41229 Lysine-specific demethylase 5C KDM5C sp|P41229|KDM5C_HUMAN Lysine-specific demethylase 5C OS=Homo sapiens GN=KDM5C PE=1 SV=2 1 139.916 5.78253E-11 202.81 179.32 202.81 1 S PEPCTKMTMRLRRNHSNAQFIESYVCRMCSR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX NHS(1)NAQFIESYVCR NHS(139.92)NAQFIES(-139.92)Y(-157.02)VCR 3 3 -0.24756 4673.2 0 0 4389.2 0 0 4814.4 0 0 5817.4 0 0 5735.1 0 0 4908.4 0 0 5535 0 0 5513 0 0 5972.6 0 0 4802.4 0 0 4422.6 0 0 4154.5 0 0 4850.6 0 0 5871.3 0 0 5763.2 0 0 4977.1 0 0 5655.7 0 0 5651.2 0 0 5874.6 0 0 4649.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 58270000 58270000 0 0 NaN 930 579 317 317 2824 2994 3207 3560 3207 3560 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15709 3207 3560 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15709 3207 3560 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15709 P41229 301 P41229 P41229 Lysine-specific demethylase 5C KDM5C sp|P41229|KDM5C_HUMAN Lysine-specific demethylase 5C OS=Homo sapiens GN=KDM5C PE=1 SV=2 0.998982 30.0522 6.29573E-05 111.53 91.456 111.53 1 S TSPKTFLESKEELSHSPEPCTKMTMRLRRNH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPXXXXXXXXX TFLESKEELS(0.001)HS(0.999)PEPCTK T(-47.81)FLES(-48.92)KEELS(-30.05)HS(30.05)PEPCT(-57.3)K 12 4 -0.13213 6907.3 0 0 10047 0 0 7930.8 0 0 9073.4 0 0 9998.4 0 0 7122.5 0 0 10819 0 0 8865.3 0 0 8332.4 0 0 5998.4 0 0 6539.9 0 0 9485.8 0 0 7953.9 0 0 9344.4 0 0 10034 0 0 7259.5 0 0 10905 0 0 9005.7 0 0 8327 0 0 5853.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13852000 13852000 0 0 NaN 931 579 301 301 4706 5017 5344 5939 5344 5939 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15940 5344 5939 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15940 5344 5939 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15940 P41229 1359 P41229 P41229 Lysine-specific demethylase 5C KDM5C sp|P41229|KDM5C_HUMAN Lysine-specific demethylase 5C OS=Homo sapiens GN=KDM5C PE=1 SV=2 0.959109 13.72 1.03618E-05 135.91 114.04 135.91 1 S MPKVQGLLENGDSVTSPEKVAPEEGSGKRDL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPXXXXXXXXXXXX VQGLLENGDSVT(0.041)S(0.959)PEK VQGLLENGDS(-37.64)VT(-13.72)S(13.72)PEK 13 3 -0.17198 9249.6 0 0 6195.2 0 0 7545.6 0 0 5926.8 0 0 6959.4 0 0 7586.7 0 0 6685 0 0 7484.9 0 0 6984.9 0 0 8480.9 0 0 8746.1 0 0 5850.8 0 0 7688.3 0 0 6128.5 0 0 7093.4 0 0 7545.1 0 0 6826.1 0 0 7767.4 0 0 6879.3 0 0 8159 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9590300 9590300 0 0 NaN 932 579 1359 1359 5223 5567 5935 6599 5935 6599 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17933 5935 6599 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17933 5935 6599 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17933 P41252 1047 P41252 P41252 Isoleucine--tRNA ligase, cytoplasmic IARS sp|P41252|SYIC_HUMAN Isoleucine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=IARS PE=1 SV=2 0.745766 4.67422 0.0120933 66.152 40.83 66.152 1 S FIFTTIKAPLKPYPVSPSDKVLIQEKTQLKG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPXXXXXXXXXXX APLKPYPVS(0.746)PS(0.254)DK APLKPY(-43.79)PVS(4.67)PS(-4.67)DK 9 3 0.14685 10165 0 0 16201 0 0 11616 0 0 19066 0 0 9654.2 0 0 12159 0 0 9479 0 0 14278 0 0 21788 0 0 7280.3 0 0 9624.4 0 0 15321 0 0 11588 0 0 19291 0 0 9922 0 0 12537 0 0 9994.3 0 0 14459 0 0 20976 0 0 7185.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27086000 27086000 0 0 NaN 933 580 1047 1047 361 387 419 464 419 464 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15368 419 464 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15368 419 464 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15368 P42166 424 P42166 P42166 Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin TMPO sp|P42166|LAP2A_HUMAN Lamina-associated polypeptide 2, isoform alpha OS=Homo sapiens GN=TMPO PE=1 SV=2 0.999925 41.2324 0.00903692 84.734 63.227 84.734 1 S QKRIDQSKFQETEFLSPPRKVPRLSEKSVEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX FQETEFLS(1)PPR FQET(-41.23)EFLS(41.23)PPR 8 2 0.36037 6059.3 0 0 10146 0 0 6538 0 0 10171 0 0 7183 0 0 5765.8 0 0 7013.7 0 0 8645.1 0 0 11271 0 0 21475 0 0 5735.5 0 0 9585.1 0 0 6563.5 0 0 10371 0 0 7252.9 0 0 6052.5 0 0 7264.1 0 0 9207.2 0 0 10941 0 0 20422 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8313700 8313700 0 0 NaN 934 581 424 424 1307 1378 1484 1646 1484 1646 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19395 1484 1646 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19395 1484 1646 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19395 P42166;P42167 66;66 P42166;P42167 P42167 Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin TMPO sp|P42166|LAP2A_HUMAN Lamina-associated polypeptide 2, isoform alpha OS=Homo sapiens GN=TMPO PE=1 SV=2;sp|P42167|LAP2B_HUMAN Lamina-associated polypeptide 2, isoforms beta/gamma OS=Homo sapiens GN=TMPO PE=1 SV=2 0.990774 20.3095 4.79065E-33 302.41 279.62 302.41 1 S PPLPAGTNSKGPPDFSSDEEREPTPVLGSGA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP GPPDFS(0.991)S(0.009)DEEREPTPVLGSGAAAAGR GPPDFS(20.31)S(-20.31)DEEREPT(-107.42)PVLGS(-141.27)GAAAAGR 6 3 -0.17359 19664 0 0 21553 0 0 21718 0 0 24872 0 0 26009 0 0 21026 0 0 27669 0 0 25392 0 0 24963 0 0 62790 0 0 18615 0 0 20379 0 0 21806 0 0 25273 0 0 26161 0 0 21420 0 0 28011 0 0 27193 0 0 24746 0 0 59711 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 97705000 97705000 0 0 NaN 935 581;582 66;66 66 1551 1633 1764;1765 1958;1959;1960 1764 1958 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15448 1764 1958 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15448 1764 1958 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15448 P42166;P42167 156;156 P42166;P42167 P42167 Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin TMPO sp|P42166|LAP2A_HUMAN Lamina-associated polypeptide 2, isoform alpha OS=Homo sapiens GN=TMPO PE=1 SV=2;sp|P42167|LAP2B_HUMAN Lamina-associated polypeptide 2, isoforms beta/gamma OS=Homo sapiens GN=TMPO PE=1 SV=2 0.999271 31.3707 0.00977207 81.002 33.025 81.002 1 S LYEKKLLKLREQGTESRSSTPLPTISSSAEN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXXXPPPPPPPPPXXXXXXXXXXXXXX LREQGT(0.001)ES(0.999)R LREQGT(-31.37)ES(31.37)R 8 2 -0.38165 10184 0 0 5689.1 0 0 10504 0 0 5667.3 0 0 6029.9 0 0 9566.8 0 0 6283.5 0 0 6819.2 0 0 6670.1 0 0 3824.7 0 0 9637.5 0 0 5374.2 0 0 10505 0 0 5883 0 0 6387.3 0 0 9388 0 0 6394.4 0 0 7061.9 0 0 6565 0 0 3759.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12098000 12098000 0 0 NaN 936 581;582 156;156 156 2535 2678 2874 3206 2874 3206 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5978 2874 3206 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5978 2874 3206 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5978 P42166 184 P42166 P42166 Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin TMPO sp|P42166|LAP2A_HUMAN Lamina-associated polypeptide 2, isoform alpha OS=Homo sapiens GN=TMPO PE=1 SV=2 0.999999 62.9175 2.00726E-16 242.11 222.12 242.11 1 S AENTRQNGSNDSDRYSDNEEGKKKEHKKVKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPXXXXXXXXX QNGSNDSDRYS(1)DNEEGK QNGS(-95.13)NDS(-62.92)DRY(-104.38)S(62.92)DNEEGK 11 3 -0.73572 16048 0 0 21506 0 0 15295 0 0 20637 0 0 13766 0 0 17778 0 0 14409 0 0 18254 0 0 22766 0 0 2107 0 0 15183 0 0 20311 0 0 15427 0 0 21196 0 0 14077 0 0 17958 0 0 14865 0 0 18355 0 0 22109 0 0 2406.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25097000 25097000 0 0 NaN 937 581 184 184 3088 3276 3505 3885 3505 3885 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6608 3505 3885 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6608 3505 3885 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6608 P42166 296 P42166 P42166 Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin TMPO sp|P42166|LAP2A_HUMAN Lamina-associated polypeptide 2, isoform alpha OS=Homo sapiens GN=TMPO PE=1 SV=2 0.867799 8.85203 8.55317E-34 322.61 290.27 322.61 1 S KSSHDRCLEKSSSSSSQPEHSAMLVSTAASP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP S(0.001)S(0.001)S(0.003)S(0.015)S(0.113)S(0.868)QPEHSAMLVSTAASPSLIK S(-31.74)S(-31.74)S(-24.7)S(-17.61)S(-8.85)S(8.85)QPEHS(-48.94)AMLVS(-161.55)T(-189.85)AAS(-251.14)PS(-275.08)LIK 6 3 0.19647 2877.1 0 0 4813.5 0 0 3377.2 0 0 3764.2 0 0 4465.1 0 0 5400.1 0 0 20917 0 0 11606 0 0 4015 0 0 13864 0 0 2724.4 0 0 4541.2 0 0 3416.2 0 0 3955.3 0 0 4683.6 0 0 5443.7 0 0 20038 0 0 11819 0 0 4678.5 0 0 13323 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23074000 23074000 0 0 NaN 938 581 296 296 4469 4760 5066 5621 5066 5621 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17971 5066 5621 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17971 5066 5621 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17971 P42166;P42167 158;158 P42166;P42167 P42167 Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin TMPO sp|P42166|LAP2A_HUMAN Lamina-associated polypeptide 2, isoform alpha OS=Homo sapiens GN=TMPO PE=1 SV=2;sp|P42167|LAP2B_HUMAN Lamina-associated polypeptide 2, isoforms beta/gamma OS=Homo sapiens GN=TMPO PE=1 SV=2 0.79578 6.74125 1.64665E-08 175.43 136.42 175.43 1 S EKKLLKLREQGTESRSSTPLPTISSSAENTR X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.796)S(0.169)T(0.036)PLPTISSSAENTR S(6.74)S(-6.74)T(-13.48)PLPT(-70.26)IS(-88.89)S(-94.1)S(-99.27)AENT(-136.43)R 1 2 -0.47488 9666.2 0 0 8564.5 0 0 10762 0 0 8640.3 0 0 9793.8 0 0 11112 0 0 11302 0 0 10491 0 0 7901.9 0 0 11091 0 0 9150.8 0 0 8091 0 0 10765 0 0 8906.7 0 0 10014 0 0 11041 0 0 11339 0 0 10881 0 0 7941.1 0 0 10687 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29862000 29862000 0 0 NaN 939 581;582 158;158 158 4481 4773 5082 5639 5082 5639 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14210 5082 5639 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14210 5082 5639 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14210 P42166;P42167 168;168 P42166;P42167 P42167 Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin TMPO sp|P42166|LAP2A_HUMAN Lamina-associated polypeptide 2, isoform alpha OS=Homo sapiens GN=TMPO PE=1 SV=2;sp|P42167|LAP2B_HUMAN Lamina-associated polypeptide 2, isoforms beta/gamma OS=Homo sapiens GN=TMPO PE=1 SV=2 0.964032 14.29 9.5508E-23 271.45 220.32 271.45 1 S GTESRSSTPLPTISSSAENTRQNGSNDSDRY X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPXXXXXXXXXX SSTPLPTISS(0.036)S(0.964)AENTR S(-157.93)S(-142.16)T(-118.25)PLPT(-79.56)IS(-41.53)S(-14.29)S(14.29)AENT(-63.54)R 11 2 0.6246 9511.3 0 0 10087 0 0 11273 0 0 9998.8 0 0 13818 0 0 9276.3 0 0 14250 0 0 11328 0 0 10790 0 0 7982.2 0 0 9006.7 0 0 9528.6 0 0 11282 0 0 10260 0 0 13875 0 0 9371.1 0 0 14390 0 0 11524 0 0 10794 0 0 7778.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26594000 26594000 0 0 NaN 940 581;582 168;168 168 4481 4773 5081 5638 5081 5638 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13904 5081 5638 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13904 5081 5638 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13904 P42167 250 P42167 P42167 Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin TMPO sp|P42167|LAP2B_HUMAN Lamina-associated polypeptide 2, isoforms beta/gamma OS=Homo sapiens GN=TMPO PE=1 SV=2 0.920886 10.8058 3.14908E-05 131.84 91.111 131.84 1 S SGSSKGGPLQALTRESTRGSRRTPRKRVETS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPXXXXXXXXXXXXX GGPLQALT(0.003)RES(0.921)T(0.076)R GGPLQALT(-25.46)RES(10.81)T(-10.81)R 11 3 0.12738 9036.4 0 0 7678.6 0 0 9145.3 0 0 7654.7 0 0 6742.5 0 0 11538 0 0 7041.7 0 0 8785.8 0 0 7698.3 0 0 2735.9 0 0 8551.1 0 0 7253.6 0 0 9173.6 0 0 7923.5 0 0 6989 0 0 11363 0 0 7171.5 0 0 9001.9 0 0 7568.1 0 0 2779.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26251000 26251000 0 0 NaN 941 582 250 250 1444 1521 1631 1801 1631 1801 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14486 1631 1801 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14486 1631 1801 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14486 P42167 306 P42167 P42167 Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin TMPO sp|P42167|LAP2B_HUMAN Lamina-associated polypeptide 2, isoforms beta/gamma OS=Homo sapiens GN=TMPO PE=1 SV=2 1 68.6159 9.133E-06 136.26 117.02 136.26 1 S ESLVVNRVTGNFKHASPILPITEFSDIPRRA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX HAS(1)PILPITEFSDIPR HAS(68.62)PILPIT(-68.62)EFS(-82.16)DIPR 3 3 0.0033781 6290.7 0 0 6701.8 0 0 6861.9 0 0 7194 0 0 2752.9 0 0 6661.8 0 0 3337.8 0 0 5143.3 0 0 6074.7 0 0 13525 0 0 5954.7 0 0 6333.7 0 0 6827.5 0 0 7347.9 0 0 3047.1 0 0 6707.7 0 0 3444.4 0 0 5625.5 0 0 5877.8 0 0 12855 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 133200000 133200000 0 0 NaN 942 582 306 306 1697 1789 1932 2153 1932 2153 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22314 1932 2153 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22314 1932 2153 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22314 P42167 184 P42167 P42167 Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin TMPO sp|P42167|LAP2B_HUMAN Lamina-associated polypeptide 2, isoforms beta/gamma OS=Homo sapiens GN=TMPO PE=1 SV=2 1 69.8115 2.85008E-17 239.39 209.36 239.39 1 S AENTRQNGSNDSDRYSDNEEDSKIELKLEKR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPPPXXXX QNGSNDSDRYS(1)DNEEDSKIELK QNGS(-76.19)NDS(-69.81)DRY(-98.94)S(69.81)DNEEDS(-92.86)KIELK 11 4 -0.19333 46825 0 0 41431 0 0 50489 0 0 39242 0 0 35777 0 0 51961 0 0 38872 0 0 45253 0 0 48636 0 0 53786 0 0 44322 0 0 39126 0 0 50455 0 0 40630 0 0 37228 0 0 51533 0 0 39687 0 0 47273 0 0 47575 0 0 51693 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 53982000 53982000 0 0 NaN 943 582 184 184 3087 3275 3504 3884 3504 3884 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13259 3504 3884 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13259 3504 3884 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13259 P42229 128 P42229 P42229 Signal transducer and activator of transcription 5A STAT5A sp|P42229|STA5A_HUMAN Signal transducer and activator of transcription 5A OS=Homo sapiens GN=STAT5A PE=1 SV=1 0.868612 8.20271 5.95194E-08 165.32 146 165.32 1 S LYNEQRLVREANNCSSPAGILVDAMSQKHLQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPXXX EANNCS(0.131)S(0.869)PAGILVDAMSQK EANNCS(-8.2)S(8.2)PAGILVDAMS(-145.41)QK 7 3 -0.92067 3650.5 0 0 7054.6 0 0 4222.8 0 0 7632.4 0 0 7357.8 0 0 3167.9 0 0 8520.1 0 0 6152.4 0 0 8096.3 0 0 18996 0 0 3456.5 0 0 6667.5 0 0 4259.8 0 0 7729.7 0 0 7297.7 0 0 3447.8 0 0 8605.3 0 0 6628.1 0 0 8006.6 0 0 18030 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 70344000 70344000 0 0 NaN 944 583 128 128 880 933 1011 1118 1011 1118 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22811 1011 1118 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22811 1011 1118 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22811 P42229 777 P42229 P42229 Signal transducer and activator of transcription 5A STAT5A sp|P42229|STA5A_HUMAN Signal transducer and activator of transcription 5A OS=Homo sapiens GN=STAT5A PE=1 SV=1 0.625415 2.43346 0.00686559 81.346 60.146 81.346 1 S RHVEELLRRPMDSLDSRLSPPAGLFTSARGS X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPXX RPMDS(0.017)LDS(0.625)RLS(0.357)PPAGLFTSAR RPMDS(-15.55)LDS(2.43)RLS(-2.43)PPAGLFT(-49.98)S(-49.45)AR 8 4 -0.56883 3057.6 0 0 3173.1 0 0 2932.6 0 0 3467.3 0 0 3185.5 0 0 3226.1 0 0 2959.1 0 0 3379.9 0 0 3122 0 0 3404.1 0 0 2892.8 0 0 2999.2 0 0 2962.8 0 0 3538.3 0 0 3214.7 0 0 3252.8 0 0 3027.5 0 0 3486.9 0 0 3073.6 0 0 3283.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15576000 15576000 0 0 NaN 945 583 777 777 3392 3602;3603 3842 4267 3842 4267 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17594 3842 4267 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17594 3842 4267 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17594 P42356 1421 P42356 P42356 Phosphatidylinositol 4-kinase alpha PI4KA sp|P42356|PI4KA_HUMAN Phosphatidylinositol 4-kinase alpha OS=Homo sapiens GN=PI4KA PE=1 SV=3 0.969004 14.9502 0.00738692 77.644 36.104 77.644 1 S TISKKSGMSKKTNRGSQLHKYYMKRRTLLLS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX T(0.031)NRGS(0.969)QLHK T(-14.95)NRGS(14.95)QLHK 5 3 -0.15223 14061 0 0 10596 0 0 13460 0 0 10000 0 0 11408 0 0 14973 0 0 11049 0 0 12939 0 0 11239 0 0 2284.3 0 0 13303 0 0 10007 0 0 13562 0 0 10384 0 0 11693 0 0 14765 0 0 11269 0 0 13126 0 0 11081 0 0 2450.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23008000 23008000 0 0 NaN 946 586 1421 1421 4810 5131 5470 6088 5470 6088 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6193 5470 6088 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6193 5470 6088 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6193 P42356 199 P42356 P42356 Phosphatidylinositol 4-kinase alpha PI4KA sp|P42356|PI4KA_HUMAN Phosphatidylinositol 4-kinase alpha OS=Homo sapiens GN=PI4KA PE=1 SV=3 0.954764 17.1492 4.04729E-05 134.02 102.18 134.02 1 S LLTVCQEGTLKRKTSSVSSISQVSPERGMPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX T(0.018)S(0.018)S(0.955)VS(0.008)SISQVSPER T(-17.15)S(-17.15)S(17.15)VS(-20.59)S(-40.31)IS(-62.49)QVS(-97.45)PER 3 2 0.19561 10701 0 0 11611 0 0 11704 0 0 14558 0 0 9387.1 0 0 11727 0 0 7288.5 0 0 12128 0 0 14391 0 0 10072 0 0 10129 0 0 10985 0 0 11696 0 0 14722 0 0 9639.9 0 0 11905 0 0 7714.3 0 0 12453 0 0 13898 0 0 9764.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13143000 13143000 0 0 NaN 947 586 199 199 4971 5300 5647 6276 5647 6276 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11780 5647 6276 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11780 5647 6276 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11780 P42356 207 P42356 P42356 Phosphatidylinositol 4-kinase alpha PI4KA sp|P42356|PI4KA_HUMAN Phosphatidylinositol 4-kinase alpha OS=Homo sapiens GN=PI4KA PE=1 SV=3 0.999362 32.036 0.0079266 79.62 64.589 79.62 1 S TLKRKTSSVSSISQVSPERGMPPPSSPGGSA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPXXXXXXXXXXXX TSSVSSIS(0.001)QVS(0.999)PER T(-69.62)S(-69.62)S(-69.62)VS(-59.41)S(-49.65)IS(-32.04)QVS(32.04)PER 11 3 -0.57042 16981 0 0 15745 0 0 17782 0 0 15633 0 0 13157 0 0 16845 0 0 11378 0 0 14808 0 0 15967 0 0 3732.9 0 0 16072 0 0 14873 0 0 17800 0 0 16078 0 0 13604 0 0 16812 0 0 11793 0 0 15045 0 0 15560 0 0 3857.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11214000 11214000 0 0 NaN 948 586 207 207 4971 5300 5646 6275 5646 6275 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10888 5646 6275 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10888 5646 6275 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10888 P42566 324 P42566 P42566 Epidermal growth factor receptor substrate 15 EPS15 sp|P42566|EPS15_HUMAN Epidermal growth factor receptor substrate 15 OS=Homo sapiens GN=EPS15 PE=1 SV=2 0.857361 7.78926 0.000148482 105.5 86.67 105.5 1 S PPSDRASLQKNIIGSSPVADFSAIKELDTLN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPXXXXXX NIIGS(0.143)S(0.857)PVADFSAIK NIIGS(-7.79)S(7.79)PVADFS(-66.5)AIK 6 3 0.55214 3756.3 0 0 4814 0 0 4152.6 0 0 5633.1 0 0 6701.5 0 0 3213.8 0 0 7896.3 0 0 6062.2 0 0 5796.1 0 0 8090.7 0 0 3555.9 0 0 4552.3 0 0 4192.1 0 0 5695 0 0 6665.1 0 0 3380.3 0 0 7922.9 0 0 6214.2 0 0 5808.1 0 0 7758.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9237300 9237300 0 0 NaN 949 587 324 324 2828 2998 3211 3564 3211 3564 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22795 3211 3564 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22795 3211 3564 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22795 P42566 790 P42566 P42566 Epidermal growth factor receptor substrate 15 EPS15 sp|P42566|EPS15_HUMAN Epidermal growth factor receptor substrate 15 OS=Homo sapiens GN=EPS15 PE=1 SV=2 1 77.6007 7.88929E-11 176.04 122.85 176.04 1 S IGTPTRPCPLPPGKRSINKLDSPDPFKLNDP X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(1)INKLDSPDPFK S(77.6)INKLDS(-77.6)PDPFK 1 3 0.58728 9323.9 0 0 22281 0 0 9324.6 0 0 20598 0 0 14754 0 0 10934 0 0 15054 0 0 15408 0 0 24910 0 0 8599.4 0 0 8822.8 0 0 21039 0 0 9456.4 0 0 21097 0 0 14666 0 0 11463 0 0 15579 0 0 15541 0 0 24161 0 0 8453.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20283000 20283000 0 0 NaN 950 587 790 790 3851 4104 4380 4871 4380 4871 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18361 4380 4871 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18361 4380 4871 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18361 P42566 796 P42566 P42566 Epidermal growth factor receptor substrate 15 EPS15 sp|P42566|EPS15_HUMAN Epidermal growth factor receptor substrate 15 OS=Homo sapiens GN=EPS15 PE=1 SV=2 0.997454 25.9306 0.0072925 79.326 54.272 79.326 1 S PCPLPPGKRSINKLDSPDPFKLNDPFQPFPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX S(0.003)INKLDS(0.997)PDPFK S(-25.93)INKLDS(25.93)PDPFK 7 3 0.029758 9296.8 0 0 8629.4 0 0 8763.4 0 0 7451.8 0 0 23391 0 0 9201.8 0 0 22669 0 0 12635 0 0 8630.4 0 0 8170.5 0 0 8795.2 0 0 8145.2 0 0 9032.7 0 0 7751.3 0 0 22850 0 0 9203.7 0 0 22726 0 0 12787 0 0 9111.1 0 0 7986 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8501300 8501300 0 0 NaN 951 587 796 796 3851 4104 4379 4870 4379 4870 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17869 4379 4870 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17869 4379 4870 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17869 P42677 11 P42677 P42677 40S ribosomal protein S27 RPS27 sp|P42677|RS27_HUMAN 40S ribosomal protein S27 OS=Homo sapiens GN=RPS27 PE=1 SV=3 1 173.715 5.24711E-08 173.71 123.51 173.71 1 S _____MPLAKDLLHPSPEEEKRKHKKKRLVQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX DLLHPS(1)PEEEK DLLHPS(173.71)PEEEK 6 3 1.3377 13228 0 0 13064 0 0 13028 0 0 13061 0 0 7530.7 0 0 13186 0 0 7638.1 0 0 11135 0 0 13555 0 0 2422.1 0 0 12516 0 0 12341 0 0 13063 0 0 13412 0 0 7973.9 0 0 13190 0 0 7931.8 0 0 11322 0 0 13124 0 0 2538.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 40201000 40201000 0 0 NaN 952 588 11 11 739 783 834 921 834 921 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13961 834 921 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13961 834 921 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13961 P42677;Q71UM5 78;78 P42677 P42677 40S ribosomal protein S27;40S ribosomal protein S27-like RPS27;RPS27L sp|P42677|RS27_HUMAN 40S ribosomal protein S27 OS=Homo sapiens GN=RPS27 PE=1 SV=3;sp|Q71UM5|RS27L_HUMAN 40S ribosomal protein S27-like OS=Homo sapiens GN=RPS27L PE=1 SV=3 0.999986 48.4682 0.0154435 76.143 54.057 71.085 1 S LCQPTGGKARLTEGCSFRRKQH_________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX LTEGCS(1)FRR LT(-48.47)EGCS(48.47)FRR 6 2 0.66253 48921 0 0 26571 0 0 45833 0 0 31225 0 0 18646 0 0 46971 0 0 19866 0 0 30920 0 0 31551 0 0 5773.3 0 0 46281 0 0 25128 0 0 45998 0 0 32030 0 0 20556 0 0 46188 0 0 20484 0 0 31811 0 0 30636 0 0 6151.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 80057000 80057000 0 0 NaN 953 588 78 78 2614;2615 2761;2762 2961;2962 3298;3299 2962 3299 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10293 2961 3298 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12981 2961 3298 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12981 P42679 501 P42679 P42679 Megakaryocyte-associated tyrosine-protein kinase MATK sp|P42679|MATK_HUMAN Megakaryocyte-associated tyrosine-protein kinase OS=Homo sapiens GN=MATK PE=1 SV=1 0.909771 10.4204 4.65627E-08 165.34 145.52 165.34 1 S GAPASVSGQDADGSTSPRSQEP_________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX SAGAPASVSGQDADGS(0.008)T(0.083)S(0.91)PR S(-148.87)AGAPAS(-130.42)VS(-97.46)GQDADGS(-20.76)T(-10.42)S(10.42)PR 18 3 0.84629 6420.3 0 0 4803.2 0 0 6527 0 0 5171 0 0 6607.9 0 0 5521.6 0 0 6236.7 0 0 6112.7 0 0 4777.6 0 0 3891.5 0 0 6075.7 0 0 4539.5 0 0 6566.5 0 0 5292.6 0 0 6694.3 0 0 5533.6 0 0 6326.3 0 0 6225.8 0 0 4775.9 0 0 3805.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15024000 15024000 0 0 NaN 954 589 501 501 3582 3805 4058 4513 4058 4513 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7586 4058 4513 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7586 4058 4513 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7586 P42684 631 P42684 P42684 Abelson tyrosine-protein kinase 2 ABL2 sp|P42684|ABL2_HUMAN Abelson tyrosine-protein kinase 2 OS=Homo sapiens GN=ABL2 PE=1 SV=1 0.913373 10.2702 0.000110399 111.33 65.995 111.33 1 S ASSGSPALPRKQRDKSPSSLLEDAKETCFTR X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX DKS(0.913)PS(0.086)S(0.001)LLEDAK DKS(10.27)PS(-10.27)S(-30.59)LLEDAK 3 3 1.6819 9172.4 0 0 15177 0 0 9735.9 0 0 13338 0 0 13737 0 0 9528.9 0 0 15371 0 0 12931 0 0 16408 0 0 9841.4 0 0 8681.6 0 0 14326 0 0 9823.2 0 0 13746 0 0 13728 0 0 9782.5 0 0 15596 0 0 13136 0 0 16146 0 0 9566.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21667000 21667000 0 0 NaN 955 590 631 631 721 765 816 902 816 902 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17161 816 902 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17161 816 902 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17161 P42684 200 P42684 P42684 Abelson tyrosine-protein kinase 2 ABL2 sp|P42684|ABL2_HUMAN Abelson tyrosine-protein kinase 2 OS=Homo sapiens GN=ABL2 PE=1 SV=1 0.429758 0 0.0334316 50.897 15.374 50.897 S YLLSSLINGSFLVRESESSPGQLSISLRYEG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPXXX ES(0.43)ES(0.43)S(0.07)PGQLS(0.07)ISLR ES(0)ES(0)S(-7.87)PGQLS(-7.87)IS(-45.36)LR 2 3 -0.52044 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 956 590 200 200 1150 1210 1302 1433 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10546 1302 1433 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10546 1302 1433 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10546 P42684 202 P42684 P42684 Abelson tyrosine-protein kinase 2 ABL2 sp|P42684|ABL2_HUMAN Abelson tyrosine-protein kinase 2 OS=Homo sapiens GN=ABL2 PE=1 SV=1 0.429758 0 0.0334316 50.897 15.374 50.897 S LSSLINGSFLVRESESSPGQLSISLRYEGRV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ES(0.43)ES(0.43)S(0.07)PGQLS(0.07)ISLR ES(0)ES(0)S(-7.87)PGQLS(-7.87)IS(-45.36)LR 4 3 -0.52044 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 957 590 202 202 1150 1210 1302 1433 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10546 1302 1433 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10546 1302 1433 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10546 P42684 620 P42684 P42684 Abelson tyrosine-protein kinase 2 ABL2 sp|P42684|ABL2_HUMAN Abelson tyrosine-protein kinase 2 OS=Homo sapiens GN=ABL2 PE=1 SV=1 0.995444 23.8363 1.70393E-10 187.04 151.69 187.04 1 S SLAPGFIRGAQASSGSPALPRKQRDKSPSSL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXPPPPPPPPPPPPPXXXXXXXXXX GAQASS(0.004)GS(0.995)PALPR GAQAS(-33.53)S(-23.84)GS(23.84)PALPR 8 2 0.73009 11381 0 0 16173 0 0 10722 0 0 18051 0 0 15146 0 0 9191.1 0 0 13945 0 0 14169 0 0 17121 0 0 4310.4 0 0 10767 0 0 15289 0 0 10886 0 0 18278 0 0 15095 0 0 9678.7 0 0 14340 0 0 14150 0 0 16759 0 0 4386.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19887000 19887000 0 0 NaN 958 590 620 620 1371 1446 1554 1718 1554 1718 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8818 1554 1718 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8818 1554 1718 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8818 P42684 819 P42684 P42684 Abelson tyrosine-protein kinase 2 ABL2 sp|P42684|ABL2_HUMAN Abelson tyrosine-protein kinase 2 OS=Homo sapiens GN=ABL2 PE=1 SV=1 0.467412 0 7.28716E-23 273.99 192.42 273.99 S NCQRSKLQLERTVSTSSQPEENVDRANDMLP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPXXXXXX TVS(0.033)T(0.033)S(0.467)S(0.467)QPEENVDR T(-40.59)VS(-11.57)T(-11.57)S(0)S(0)QPEENVDR 5 2 0.83791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 959 590 819 819 5023 5357 5709 6348 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8215 5709 6348 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8215 5709 6348 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8215 P42684 820 P42684 P42684 Abelson tyrosine-protein kinase 2 ABL2 sp|P42684|ABL2_HUMAN Abelson tyrosine-protein kinase 2 OS=Homo sapiens GN=ABL2 PE=1 SV=1 0.467412 0 7.28716E-23 273.99 192.42 273.99 S CQRSKLQLERTVSTSSQPEENVDRANDMLPK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TVS(0.033)T(0.033)S(0.467)S(0.467)QPEENVDR T(-40.59)VS(-11.57)T(-11.57)S(0)S(0)QPEENVDR 6 2 0.83791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 960 590 820 820 5023 5357 5709 6348 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8215 5709 6348 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8215 5709 6348 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8215 P42684 936 P42684 P42684 Abelson tyrosine-protein kinase 2 ABL2 sp|P42684|ABL2_HUMAN Abelson tyrosine-protein kinase 2 OS=Homo sapiens GN=ABL2 PE=1 SV=1 0.883633 8.80441 0.000317147 112.45 87.602 112.45 1 S PVLPTTHNHKVPVLISPTLKHTPADVQLIGT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX VPVLIS(0.884)PT(0.116)LK VPVLIS(8.8)PT(-8.8)LK 6 2 0.3415 8293 0 0 10350 0 0 8503.5 0 0 10102 0 0 9154.1 0 0 7716.9 0 0 8997.7 0 0 10218 0 0 11233 0 0 19694 0 0 7848.1 0 0 9776.1 0 0 8558.1 0 0 10349 0 0 9251.1 0 0 7910 0 0 9227.6 0 0 10746 0 0 10989 0 0 18780 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7666700 7666700 0 0 NaN 961 590 936 936 5216 5560 5924 6582 5924 6582 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22324 5924 6582 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22324 5924 6582 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22324 P42694 1763 P42694 P42694 Probable helicase with zinc finger domain HELZ sp|P42694|HELZ_HUMAN Probable helicase with zinc finger domain OS=Homo sapiens GN=HELZ PE=1 SV=2 0.667033 3.09735 4.92746E-26 287.3 267.13 287.3 1 S YEPRGPGRPLYQRRISSSSVQPCSEEVSTPQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RIS(0.667)S(0.327)S(0.006)SVQPCSEEVSTPQDSLAQCK RIS(3.1)S(-3.1)S(-20.7)S(-32.36)VQPCS(-79.16)EEVS(-115.32)T(-130.14)PQDS(-214.6)LAQCK 3 3 -0.56566 8313.5 0 0 6325 0 0 8512.4 0 0 6412.4 0 0 8539.8 0 0 7921.6 0 0 9498 0 0 9214.4 0 0 6647.5 0 0 6576.2 0 0 7867.4 0 0 5975.5 0 0 8562.2 0 0 6603 0 0 8675.5 0 0 7901.5 0 0 9544.1 0 0 9390.7 0 0 6679.9 0 0 6405.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 41631000 41631000 0 0 NaN 962 591 1763 1763 3285 3486 3723 4136 3723 4136 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13992 3723 4136 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13992 3723 4136 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13992 P42694 1738 P42694 P42694 Probable helicase with zinc finger domain HELZ sp|P42694|HELZ_HUMAN Probable helicase with zinc finger domain OS=Homo sapiens GN=HELZ PE=1 SV=2 0.915596 10.848 0.000163831 110.97 92.707 110.97 1 S AIGQEPFHPLSSRTVSSSSLPSLEEYEPRGP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX T(0.002)VS(0.916)S(0.075)S(0.006)S(0.001)LPSLEEYEPR T(-26.57)VS(10.85)S(-10.85)S(-21.5)S(-31.94)LPS(-55.44)LEEY(-86.47)EPR 3 2 0.25984 4460.4 0 0 5903.9 0 0 4780.6 0 0 5805.2 0 0 5245.3 0 0 3933.7 0 0 5552.7 0 0 7753.4 0 0 6334 0 0 59813 0 0 4221.8 0 0 5576.6 0 0 4801.6 0 0 5936.6 0 0 5300.6 0 0 4187 0 0 5658.8 0 0 9431.4 0 0 6216.6 0 0 56501 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9887300 9887300 0 0 NaN 963 591 1738 1738 5022 5356 5708 6347 5708 6347 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19372 5708 6347 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19372 5708 6347 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19372 P42695 1384 P42695 P42695 Condensin-2 complex subunit D3 NCAPD3 sp|P42695|CNDD3_HUMAN Condensin-2 complex subunit D3 OS=Homo sapiens GN=NCAPD3 PE=1 SV=2 0.999576 33.7246 1.68515E-07 165.69 129.4 165.69 1 S RSRSLGVLPFTLNSGSPEKTCSQVSSYSLEQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPXXXXXXXXXXXX SLGVLPFTLNSGS(1)PEK S(-135.6)LGVLPFT(-94.16)LNS(-33.72)GS(33.72)PEK 13 3 -0.15068 5970.6 0 0 5880.7 0 0 7029.6 0 0 6286.6 0 0 5898.9 0 0 6922.4 0 0 6161.8 0 0 7500 0 0 5180 0 0 18201 0 0 5653.7 0 0 5557.6 0 0 7004.1 0 0 6440.3 0 0 6055.8 0 0 6951.8 0 0 6232.7 0 0 8049.1 0 0 5152.7 0 0 17312 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 167490000 167490000 0 0 NaN 964 592 1384 1384 3942 4201 4483 4983 4483 4983 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23645 4483 4983 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23645 4483 4983 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23645 P42696 14 P42696 P42696 RNA-binding protein 34 RBM34 sp|P42696|RBM34_HUMAN RNA-binding protein 34 OS=Homo sapiens GN=RBM34 PE=1 SV=2 1 295.666 4.64214E-31 295.67 252.38 295.67 1 S __MALEGMSKRKRKRSVQEGENPDDGVRGSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX S(1)VQEGENPDDGVR S(295.67)VQEGENPDDGVR 1 2 0.097922 19050 0 0 6399.3 0 0 18029 0 0 7289.7 0 0 9790.8 0 0 18374 0 0 11974 0 0 13135 0 0 8140.2 0 0 3489.6 0 0 18022 0 0 6050.3 0 0 18116 0 0 7608.6 0 0 10449 0 0 17863 0 0 11978 0 0 13483 0 0 8194.6 0 0 3589.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27603000 27603000 0 0 NaN 965 593 14 14 4561 4865 5182 5754 5182 5754 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7907 5182 5754 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7907 5182 5754 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7907 P42858 1865 P42858 P42858 Huntingtin HTT sp|P42858|HD_HUMAN Huntingtin OS=Homo sapiens GN=HTT PE=1 SV=2 0.596007 2.55071 0.00598506 88.267 69.955 88.267 1 S WWAEVQQTPKRHSLSSTKLLSPQMSGEEEDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX HSLS(0.331)S(0.596)T(0.073)K HS(-40.18)LS(-2.55)S(2.55)T(-9.14)K 5 3 -0.29983 23633 0 0 11211 0 0 25304 0 0 10250 0 0 13552 0 0 26207 0 0 17991 0 0 19447 0 0 12022 0 0 2680.6 0 0 22369 0 0 10585 0 0 25248 0 0 10840 0 0 14504 0 0 25476 0 0 17937 0 0 19850 0 0 12116 0 0 2974.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11332000 11332000 0 0 NaN 966 594 1865 1865 1749 1846 1992 2220 1992 2220 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7428 1992 2220 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7428 1992 2220 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7428 P43243 206 P43243 P43243 Matrin-3 MATR3 sp|P43243|MATR3_HUMAN Matrin-3 OS=Homo sapiens GN=MATR3 PE=1 SV=2 0.999998 58.0888 0.00275094 94.201 78.999 94.201 1 S DRGPSLNPVLDYDHGSRSQESGYYDRMDYED X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPXXXXXXXXXXXXXX GPSLNPVLDYDHGS(1)R GPS(-83.57)LNPVLDY(-58.09)DHGS(58.09)R 14 3 0.14044 6168.9 0 0 6138.3 0 0 7273 0 0 7361.3 0 0 5725.2 0 0 7038.2 0 0 4772.1 0 0 7177.2 0 0 6173.5 0 0 5460.5 0 0 5841.5 0 0 5805.6 0 0 7239.3 0 0 7478.5 0 0 5889.2 0 0 7081.2 0 0 4941.7 0 0 7358.4 0 0 6031.9 0 0 5307.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7521800 7521800 0 0 NaN 967 595 206 206 1561 1645 1778 1976 1778 1976 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16107 1778 1976 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16107 1778 1976 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16107 P43243 705 P43243 P43243 Matrin-3 MATR3 sp|P43243|MATR3_HUMAN Matrin-3 OS=Homo sapiens GN=MATR3 PE=1 SV=2 0.98768 19.0402 0.036012 49.216 29.863 49.216 1 S DGKKEPSDKAVKKDGSASAAAKKKLKKVDKI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX KDGS(0.988)AS(0.012)AAAK KDGS(19.04)AS(-19.04)AAAK 4 3 1.929 36117 0 0 21863 0 0 36784 0 0 22272 0 0 16940 0 0 38754 0 0 19121 0 0 27965 0 0 25442 0 0 3225.1 0 0 34179 0 0 20655 0 0 36762 0 0 23108 0 0 18399 0 0 37980 0 0 19532 0 0 28566 0 0 24835 0 0 3684 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 34845000 34845000 0 0 NaN 968 595 705 705 2027 2145 2311 2578 2311 2578 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7306 2311 2578 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7306 2311 2578 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7306 P43243 188 P43243 P43243 Matrin-3 MATR3 sp|P43243|MATR3_HUMAN Matrin-3 OS=Homo sapiens GN=MATR3 PE=1 SV=2 1 110.179 0.00205136 110.18 58.734 110.18 1 S VPRDDWEEKRHFRRDSFDDRGPSLNPVLDYD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX RDS(1)FDDR RDS(110.18)FDDR 3 2 0.45289 9470 0 0 10516 0 0 11598 0 0 10448 0 0 12845 0 0 9981.1 0 0 12439 0 0 11404 0 0 10817 0 0 2844.1 0 0 8969 0 0 9933.7 0 0 11571 0 0 10724 0 0 12954 0 0 10049 0 0 12637 0 0 11469 0 0 10742 0 0 2942 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27683000 27683000 0 0 NaN 969 595 188 188 3208 3402 3636 4032 3636 4032 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6291 3636 4032 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6291 3636 4032 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6291 P43243 598 P43243 P43243 Matrin-3 MATR3 sp|P43243|MATR3_HUMAN Matrin-3 OS=Homo sapiens GN=MATR3 PE=1 SV=2 0.997978 26.9626 0.000520151 131.22 88.007 95.498 1 S GIDLLKKDKSRKRSYSPDGKESPSDKKSKTD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPXXXX RS(0.002)YS(0.998)PDGK RS(-26.96)Y(-48.61)S(26.96)PDGK 4 3 1.6061 184270 0 0 163690 0 0 176340 0 0 162790 0 0 178580 0 0 182460 0 0 200660 0 0 184760 0 0 163650 0 0 24148 0 0 174330 0 0 154630 0 0 178090 0 0 167520 0 0 181370 0 0 182080 0 0 202180 0 0 185970 0 0 163040 0 0 27015 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 1777400000 1777400000 0 0 NaN 970 595 598 598 3513;4599;4600 3730;4905;4906 3976;5225;5226 4415;5802;5803;5804 3976 4415 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7190 5225 5802 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9029 5225 5802 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9029 P43243 208 P43243 P43243 Matrin-3 MATR3 sp|P43243|MATR3_HUMAN Matrin-3 OS=Homo sapiens GN=MATR3 PE=1 SV=2 0.765921 5.26301 0.0159248 70.728 53.171 70.728 1 S GPSLNPVLDYDHGSRSQESGYYDRMDYEDDR X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(0.766)QES(0.228)GY(0.006)YDR S(5.26)QES(-5.26)GY(-21.19)Y(-34.28)DR 1 2 -0.49333 13391 0 0 13335 0 0 14160 0 0 13393 0 0 24976 0 0 14843 0 0 29131 0 0 17091 0 0 12342 0 0 4754.4 0 0 12674 0 0 12598 0 0 14355 0 0 13771 0 0 24750 0 0 14850 0 0 28993 0 0 17200 0 0 12890 0 0 4872.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 33799000 33799000 0 0 NaN 971 595 208 208 4229 4507 4803 5330 4803 5330 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7739 4803 5330 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7739 4803 5330 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7739 P43307 268 P43307 P43307 Translocon-associated protein subunit alpha SSR1 sp|P43307|SSRA_HUMAN Translocon-associated protein subunit alpha OS=Homo sapiens GN=SSR1 PE=1 SV=3 0.999435 32.4734 1.31483E-34 296.91 266.54 213.43 1 S MSWIPQETLNQINKASPRRLPRKRAQKRSVG Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX VEMGTSSQNDVDMSWIPQET(0.001)LNQINKAS(0.999)PR VEMGT(-177.8)S(-172.92)S(-167.4)QNDVDMS(-77.1)WIPQET(-32.47)LNQINKAS(32.47)PR 28 4 1.6678 27579 0 0 13540 0 0 29974 0 0 16067 0 0 26231 0 0 29760 0 0 30019 0 0 28681 0 0 15341 0 0 77874 0 0 26106 0 0 12806 0 0 30005 0 0 16563 0 0 26880 0 0 29352 0 0 29973 0 0 31157 0 0 15760 0 0 73992 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 183770000 183770000 0 0 NaN 972 596 268 268 5095 5431;5432 5783;5784;5785 6427;6428;6429;6430 5783 6427 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20536 5785 6430 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22540 5785 6430 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22540 P43378 592 P43378 P43378 Tyrosine-protein phosphatase non-receptor type 9 PTPN9 sp|P43378|PTN9_HUMAN Tyrosine-protein phosphatase non-receptor type 9 OS=Homo sapiens GN=PTPN9 PE=1 SV=1 1 100.645 0.000122671 108.25 94.048 108.25 1 S KEGMVSSGQNLLAVESQ______________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPXXXXXXXXXXXXXX EGMVSSGQNLLAVES(1)Q EGMVS(-102.77)S(-100.64)GQNLLAVES(100.64)Q 15 2 -0.76094 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 973 597 592 592 969 1023 1108 1223 1108 1223 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18785 1108 1223 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18785 1108 1223 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18785 P43405 295 P43405 P43405 Tyrosine-protein kinase SYK SYK sp|P43405|KSYK_HUMAN Tyrosine-protein kinase SYK OS=Homo sapiens GN=SYK PE=1 SV=1 0.695581 3.60127 0.0140256 62.088 24.533 62.088 1 S HPATWSAGGIISRIKSYSFPKPGHRKSSPAQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPXXXXXX S(0.696)Y(0.001)S(0.304)FPKPGHR S(3.6)Y(-29)S(-3.6)FPKPGHR 1 3 0.27608 24846 0 0 14175 0 0 23707 0 0 15304 0 0 18636 0 0 31253 0 0 21708 0 0 21950 0 0 15809 0 0 4002.1 0 0 23507 0 0 13397 0 0 23881 0 0 15901 0 0 19249 0 0 30505 0 0 21788 0 0 22499 0 0 15849 0 0 4276.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 55185000 55185000 0 0 NaN 974 598 295 295 4598 4904 5224 5801 5224 5801 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12045 5224 5801 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12045 5224 5801 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12045 P43487 60 P43487 P43487 Ran-specific GTPase-activating protein RANBP1 sp|P43487|RANG_HUMAN Ran-specific GTPase-activating protein OS=Homo sapiens GN=RANBP1 PE=1 SV=1 1 89.2595 0.00398238 89.26 70.303 89.26 1 S EEELFKMRAKLFRFASENDLPEWKERGTGDV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX FAS(1)ENDLPEWK FAS(89.26)ENDLPEWK 3 3 -0.010867 4634.9 0 0 7976 0 0 4529.1 0 0 8133.7 0 0 4556.7 0 0 4393.8 0 0 5163.7 0 0 5072.9 0 0 9157 0 0 6031.8 0 0 4385.4 0 0 7535.5 0 0 4568.1 0 0 8281.7 0 0 4634.8 0 0 4590.9 0 0 5336.4 0 0 5243.9 0 0 8865.9 0 0 5797.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9936300 9936300 0 0 NaN 975 599 60 60 1241 1306 1407 1559 1407 1559 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20758 1407 1559 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20758 1407 1559 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20758 P45379 73 P45379 P45379 Troponin T, cardiac muscle TNNT2 sp|P45379|TNNT2_HUMAN Troponin T, cardiac muscle OS=Homo sapiens GN=TNNT2 PE=1 SV=3 1 92.2953 0.00330533 92.295 55.448 92.295 1 S EEEEAKEAEDGPMEESKPKPRSFMPNLVPPK X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPXXXXXXXXXXXXXX EAEDGPMEES(1)K EAEDGPMEES(92.3)K 10 4 1.7594 12402 0 0 16060 0 0 15891 0 0 16535 0 0 20109 0 0 14008 0 0 22302 0 0 17136 0 0 16104 0 0 1150.9 0 0 11748 0 0 15174 0 0 15856 0 0 16908 0 0 20183 0 0 14195 0 0 22426 0 0 17102 0 0 16153 0 0 1480.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 317830000 317830000 0 0 NaN 976 601 73 73 867 920 997 1103 997 1103 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10908 997 1103 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10908 997 1103 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10908 P45880 115 P45880 P45880 Voltage-dependent anion-selective channel protein 2 VDAC2 sp|P45880|VDAC2_HUMAN Voltage-dependent anion-selective channel protein 2 OS=Homo sapiens GN=VDAC2 PE=1 SV=2 0.99999 50.1567 7.53205E-16 227.46 194.1 171.08 1 S DQICQGLKLTFDTTFSPNTGKKSGKIKSSYK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPXXXXXXXXX LTFDTTFS(1)PNTGK LT(-86.32)FDT(-65.94)T(-50.16)FS(50.16)PNT(-87.71)GK 8 3 -0.41618 73902 0 0 122980 0 0 66989 0 0 129280 0 0 67907 0 0 74252 0 0 67512 0 0 91395 0 0 142320 0 0 76780 0 0 69904 0 0 116210 0 0 67862 0 0 131470 0 0 68923 0 0 77242 0 0 70789 0 0 93325 0 0 137250 0 0 74413 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 152770000 152770000 0 0 NaN 977 602 115 115 2619;2620 2766;2767 2966;2967 3303;3304 2966 3303 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20531 2967 3304 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18961 2967 3304 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18961 P46013 2528 P46013 P46013 Antigen KI-67 MKI67 sp|P46013|KI67_HUMAN Antigen KI-67 OS=Homo sapiens GN=MKI67 PE=1 SV=2 1 72.1522 0.0114749 72.152 46.493 72.152 1 S TEPTGDSKSIKAFKESPKQILDPAASVTGSR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX AFKES(1)PK AFKES(72.15)PK 5 3 0.041337 59390 0 0 49044 0 0 57535 0 0 46981 0 0 14115 0 0 50982 0 0 14935 0 0 39340 0 0 49108 0 0 2193.9 0 0 56192 0 0 46318 0 0 57512 0 0 48428 0 0 16932 0 0 50782 0 0 16099 0 0 39978 0 0 47005 0 0 2976.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 136550000 136550000 0 0 NaN 978 603 2528 2528 176 184 198 223 198 223 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11099 198 223 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11099 198 223 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11099 P46013 1679 P46013 P46013 Antigen KI-67 MKI67 sp|P46013|KI67_HUMAN Antigen KI-67 OS=Homo sapiens GN=MKI67 PE=1 SV=2 1 108.57 0.00193033 108.57 71.094 108.57 1 S TEPTGDGKSMKAFMESPKQILDSAASLTGSK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP AFMES(1)PK AFMES(108.57)PK 5 2 -0.192 41271 0 0 39596 0 0 38997 0 0 38348 0 0 21325 0 0 44452 0 0 23913 0 0 37627 0 0 43382 0 0 69156 0 0 39044 0 0 37398 0 0 39187 0 0 39548 0 0 22739 0 0 44328 0 0 24750 0 0 40091 0 0 41979 0 0 65989 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 57413000 57413000 0 0 NaN 979 603 1679 1679 180;181 188;189 202;203 227;228 202 227 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14935 202 227 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14935 202 227 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14935 P46013 584 P46013 P46013 Antigen KI-67 MKI67 sp|P46013|KI67_HUMAN Antigen KI-67 OS=Homo sapiens GN=MKI67 PE=1 SV=2 0.999935 41.8587 6.03674E-05 126.8 113.6 126.8 1 S VEVKAQSLVISPPAPSPRKTPVASDQRRRSC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPXXXXXXXXXXXXX AQSLVISPPAPS(1)PR AQS(-99.12)LVIS(-41.86)PPAPS(41.86)PR 12 3 -0.4149 11491 0 0 9905.5 0 0 11580 0 0 9488.5 0 0 9747.2 0 0 11966 0 0 9713.1 0 0 10329 0 0 10189 0 0 5293 0 0 10874 0 0 9355 0 0 11633 0 0 9807.7 0 0 9999.7 0 0 11873 0 0 9901.8 0 0 10584 0 0 10034 0 0 5223 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 89010000 89010000 0 0 NaN 980 603 584 584 400 428 463 514;515 463 515 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16213 463 515 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16213 463 515 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16213 P46013 2105 P46013 P46013 Antigen KI-67 MKI67 sp|P46013|KI67_HUMAN Antigen KI-67 OS=Homo sapiens GN=MKI67 PE=1 SV=2 0.999984 48.0847 2.01703E-07 146.15 133.35 146.15 1 S EESTTDDKTTKIACKSPPPESMDTPTSTRRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPXX IACKS(1)PPPESMDTPTSTR IACKS(48.08)PPPES(-48.08)MDT(-75.01)PT(-85.04)S(-88.35)T(-87.2)R 5 3 -0.92149 12643 0 0 18679 0 0 14331 0 0 19884 0 0 11408 0 0 13943 0 0 11421 0 0 15582 0 0 20582 0 0 9313.1 0 0 11970 0 0 17652 0 0 14298 0 0 20247 0 0 11758 0 0 14279 0 0 11876 0 0 15847 0 0 19920 0 0 9130.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28517000 28517000 0 0 NaN 981 603 2105 2105 1766 1865 2012 2243 2012 2243 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12197 2012 2243 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12197 2012 2243 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12197 P46013 1131 P46013 P46013 Antigen KI-67 MKI67 sp|P46013|KI67_HUMAN Antigen KI-67 OS=Homo sapiens GN=MKI67 PE=1 SV=2 0.999204 30.986 2.34201E-11 203.4 171.93 203.4 1 S EESMTDEKTTKIACKSPPPESVDTPTSTKQW X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPXX IACKS(0.999)PPPES(0.001)VDTPTSTK IACKS(30.99)PPPES(-30.99)VDT(-78.29)PT(-86.66)S(-93.15)T(-99.56)K 5 3 0.11339 26084 0 0 31559 0 0 30945 0 0 33423 0 0 16141 0 0 27653 0 0 17143 0 0 28276 0 0 35692 0 0 10101 0 0 24700 0 0 29823 0 0 30701 0 0 34111 0 0 17286 0 0 28003 0 0 17910 0 0 28643 0 0 34431 0 0 10166 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 47292000 47292000 0 0 NaN 982 603 1131 1131 1767 1866 2013 2244 2013 2244 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12978 2013 2244 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12978 2013 2244 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12978 P46013 2344 P46013 P46013 Antigen KI-67 MKI67 sp|P46013|KI67_HUMAN Antigen KI-67 OS=Homo sapiens GN=MKI67 PE=1 SV=2 1 68.5441 1.09964E-05 132.84 106.21 132.84 1 S DKPTTDEKTTKIACKSPQPDPVDTPASTKQR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPXX IACKS(1)PQPDPVDTPASTK IACKS(68.54)PQPDPVDT(-68.54)PAS(-90.46)T(-96.73)K 5 3 0.38926 13303 0 0 13792 0 0 16712 0 0 14918 0 0 9669.9 0 0 15312 0 0 9591.1 0 0 13770 0 0 16976 0 0 12412 0 0 12600 0 0 13035 0 0 16546 0 0 15255 0 0 10235 0 0 15334 0 0 9968.9 0 0 14246 0 0 16437 0 0 12006 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11802000 11802000 0 0 NaN 983 603 2344 2344 1768 1867 2014 2245 2014 2245 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13440 2014 2245 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13440 2014 2245 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13440 P46013 2223 P46013 P46013 Antigen KI-67 MKI67 sp|P46013|KI67_HUMAN Antigen KI-67 OS=Homo sapiens GN=MKI67 PE=1 SV=2 1 78.2084 5.51523E-08 150.14 129.48 150.14 1 S DKPTTHEKTTKIACRSPQPDPVGTPTIFKPQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP IACRS(1)PQPDPVGTPTIFKPQSK IACRS(78.21)PQPDPVGT(-78.21)PT(-90.24)IFKPQS(-118)K 5 4 0.030173 10851 0 0 23007 0 0 12637 0 0 22706 0 0 11116 0 0 12744 0 0 11907 0 0 16899 0 0 26500 0 0 19978 0 0 10274 0 0 21732 0 0 12605 0 0 23172 0 0 11396 0 0 13308 0 0 12482 0 0 17392 0 0 25529 0 0 19203 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24347000 24347000 0 0 NaN 984 603 2223 2223 1769 1868 2015 2246 2015 2246 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16969 2015 2246 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16969 2015 2246 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16969 P46013 1861 P46013 P46013 Antigen KI-67 MKI67 sp|P46013|KI67_HUMAN Antigen KI-67 OS=Homo sapiens GN=MKI67 PE=1 SV=2 0.706164 3.80801 2.19241E-11 204.04 169.88 204.04 1 S NPTTDEKTTKKILCKSPQSDPADTPTNTKQR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPXX ILCKS(0.706)PQS(0.294)DPADTPTNTK ILCKS(3.81)PQS(-3.81)DPADT(-87.69)PT(-101.38)NT(-121.77)K 5 3 0.047791 15218 0 0 15478 0 0 15433 0 0 16445 0 0 6831.7 0 0 15841 0 0 7104.8 0 0 11585 0 0 15804 0 0 11770 0 0 14401 0 0 14627 0 0 15423 0 0 16817 0 0 7452.7 0 0 15874 0 0 7457.2 0 0 12140 0 0 15225 0 0 11351 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14345000 14345000 0 0 NaN 985 603 1861 1861 1872 1976 2134 2392 2134 2392 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14603 2134 2392 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14603 2134 2392 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14603 P46013 2827 P46013 P46013 Antigen KI-67 MKI67 sp|P46013|KI67_HUMAN Antigen KI-67 OS=Homo sapiens GN=MKI67 PE=1 SV=2 0.590944 1.59774 0.0161716 65.915 47.083 65.915 1 S EESMTDDKTTKIPCKSSPELEDTATSSKRRP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPXXX IPCKS(0.591)S(0.409)PELEDTATSSK IPCKS(1.6)S(-1.6)PELEDT(-48.62)AT(-56.91)S(-56.97)S(-61.21)K 5 4 -2.6532 24367 0 0 24116 0 0 22415 0 0 22290 0 0 24339 0 0 21048 0 0 22899 0 0 24194 0 0 25324 0 0 10506 0 0 23050 0 0 22771 0 0 22704 0 0 22978 0 0 24568 0 0 21212 0 0 23445 0 0 24463 0 0 24884 0 0 10453 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 49626000 49626000 0 0 NaN 986 603 2827 2827 1904 2011 2172 2432 2172 2432 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14424 2172 2432 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14424 2172 2432 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14424 P46013 2828 P46013 P46013 Antigen KI-67 MKI67 sp|P46013|KI67_HUMAN Antigen KI-67 OS=Homo sapiens GN=MKI67 PE=1 SV=2 0.90094 9.58797 7.2864E-23 267.54 234.98 267.54 1 S ESMTDDKTTKIPCKSSPELEDTATSSKRRPR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPXXXX IPCKS(0.099)S(0.901)PELEDTATSSK IPCKS(-9.59)S(9.59)PELEDT(-68.27)AT(-101.65)S(-133.6)S(-138.8)K 6 3 0.12612 23162 0 0 40272 0 0 22450 0 0 43103 0 0 12496 0 0 20622 0 0 13782 0 0 26140 0 0 45592 0 0 19490 0 0 21915 0 0 38059 0 0 22528 0 0 43723 0 0 13317 0 0 21780 0 0 14838 0 0 26594 0 0 43636 0 0 18957 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 95913000 95913000 0 0 NaN 987 603 2828 2828 1904 2011 2171 2431 2171 2431 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14347 2171 2431 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14347 2171 2431 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14347 P46013 1937 P46013 P46013 Antigen KI-67 MKI67 sp|P46013|KI67_HUMAN Antigen KI-67 OS=Homo sapiens GN=MKI67 PE=1 SV=2 1 96.0959 0.00217157 96.096 74.465 96.096 1 S GTPVEKLDLLGNLPGSKRRPQTPKEKAKALE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX LDLLGNLPGS(1)KR LDLLGNLPGS(96.1)KR 10 3 0.077471 5896.9 0 0 5442.7 0 0 6215.8 0 0 4987 0 0 2184.7 0 0 5984.3 0 0 2911.8 0 0 5067.3 0 0 4807.2 0 0 3986 0 0 5581.2 0 0 5138.9 0 0 6192.7 0 0 5164.3 0 0 2467.1 0 0 5949.8 0 0 2980.9 0 0 5238.5 0 0 4662.9 0 0 3870.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8320500 8320500 0 0 NaN 988 603 1937 1937 2312 2444 2633 2943 2633 2943 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20660 2633 2943 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20660 2633 2943 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20660 P46013 1636 P46013 P46013 Antigen KI-67 MKI67 sp|P46013|KI67_HUMAN Antigen KI-67 OS=Homo sapiens GN=MKI67 PE=1 SV=2 0.749264 4.75418 0.00793605 82.417 33.116 82.417 1 S DPDKNPASSKRRLKTSLGKVGVKEELLAVGK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX LKT(0.251)S(0.749)LGK LKT(-4.75)S(4.75)LGK 4 3 0.36995 19328 0 0 17648 0 0 19220 0 0 16239 0 0 8687 0 0 19259 0 0 10419 0 0 15341 0 0 17354 0 0 4102.8 0 0 18289 0 0 16664 0 0 19234 0 0 16808 0 0 9468.5 0 0 19128 0 0 10712 0 0 15664 0 0 16829 0 0 4218.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11973000 11973000 0 0 NaN 989 603 1636 1636 2424 2562 2756 3078 2756 3078 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13551 2756 3078 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13551 2756 3078 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13551 P46013 1376 P46013 P46013 Antigen KI-67 MKI67 sp|P46013|KI67_HUMAN Antigen KI-67 OS=Homo sapiens GN=MKI67 PE=1 SV=2 0.933044 11.4567 0.00424639 95.622 83.772 95.622 1 S EAVAAGKTTKMPCESSPPESADTPTSTRRQP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPXXX MPCES(0.067)S(0.933)PPESADTPTSTR MPCES(-11.46)S(11.46)PPES(-36)ADT(-52.02)PT(-64.78)S(-67.98)T(-67.98)R 6 3 0.095535 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 990 603 1376 1376 2722 2887 3096 3443 3096 3443 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10858 3096 3443 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10858 3096 3443 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10858 P46013 374 P46013 P46013 Antigen KI-67 MKI67 sp|P46013|KI67_HUMAN Antigen KI-67 OS=Homo sapiens GN=MKI67 PE=1 SV=2 1 66.3263 0.0144419 66.326 39.62 66.326 1 S QKHKNKDLYTTGRRESVNLGKSEGFKAGDKT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX RES(1)VNLGK RES(66.33)VNLGK 3 3 0.36771 40110 0 0 18858 0 0 43862 0 0 17315 0 0 19231 0 0 45014 0 0 18211 0 0 26898 0 0 21155 0 0 2020.1 0 0 37968 0 0 17806 0 0 43648 0 0 18318 0 0 20958 0 0 43660 0 0 18667 0 0 27744 0 0 20749 0 0 2524.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 36994000 36994000 0 0 NaN 991 603 374 374 3229 3425 3660 4060 3660 4060 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10182 3660 4060 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10182 3660 4060 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10182 P46013 2261 P46013 P46013 Antigen KI-67 MKI67 sp|P46013|KI67_HUMAN Antigen KI-67 OS=Homo sapiens GN=MKI67 PE=1 SV=2 0.574164 1.29794 0.04397 44.57 24.808 44.57 1 S ADVEEESLALRKRTPSVGKAMDTPKPAGGDE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX RT(0.426)PS(0.574)VGK RT(-1.3)PS(1.3)VGK 4 3 0.20267 29190 0 0 17806 0 0 28705 0 0 17736 0 0 14767 0 0 28354 0 0 14185 0 0 19328 0 0 17527 0 0 3270.9 0 0 27620 0 0 16821 0 0 28760 0 0 18386 0 0 15804 0 0 27839 0 0 14559 0 0 19836 0 0 17153 0 0 3527.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18423000 18423000 0 0 NaN 992 603 2261 2261 3526 3743 3989 4429 3989 4429 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7676 3989 4429 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7676 3989 4429 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7676 P46013 127 P46013 P46013 Antigen KI-67 MKI67 sp|P46013|KI67_HUMAN Antigen KI-67 OS=Homo sapiens GN=MKI67 PE=1 SV=2 0.87354 8.39378 2.59958E-14 227.72 160.39 227.72 1 S PRKIREQEPARRVSRSSFSSDPDEKAQDSKA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPXXXXXX S(0.874)S(0.126)FSSDPDEK S(8.39)S(-8.39)FS(-48)S(-77.4)DPDEK 1 2 -4.2313 42778 0 0 21415 0 0 43545 0 0 22005 0 0 33281 0 0 43223 0 0 31808 0 0 34207 0 0 22640 0 0 9102.2 0 0 40482 0 0 20233 0 0 43675 0 0 22899 0 0 34350 0 0 42282 0 0 32198 0 0 34936 0 0 22728 0 0 9362.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19472000 19472000 0 0 NaN 993 603 127 127 4343 4629 4932 5476 4932 5476 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10812 4932 5476 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10812 4932 5476 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10812 P46013 1071 P46013 P46013 Antigen KI-67 MKI67 sp|P46013|KI67_HUMAN Antigen KI-67 OS=Homo sapiens GN=MKI67 PE=1 SV=2 0.999458 32.6547 0.0128827 68.069 23.759 68.069 1 S REPAGDGKSIRTFKESPKQILDPAARVTGMK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX T(0.001)FKES(0.999)PK T(-32.65)FKES(32.65)PK 5 3 1.122 28964 0 0 26365 0 0 31437 0 0 25906 0 0 11071 0 0 30119 0 0 11454 0 0 25478 0 0 28274 0 0 2782.4 0 0 27417 0 0 24904 0 0 31265 0 0 26696 0 0 12459 0 0 29949 0 0 12101 0 0 25820 0 0 27184 0 0 3209.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 86130000 86130000 0 0 NaN 994 603 1071 1071 4703 5014 5341 5936 5341 5936 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10885 5341 5936 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10885 5341 5936 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10885 P46013 357 P46013 P46013 Antigen KI-67 MKI67 sp|P46013|KI67_HUMAN Antigen KI-67 OS=Homo sapiens GN=MKI67 PE=1 SV=2 1 98.0518 1.35117E-10 188.71 163.92 188.71 1 S PAKMKTPVQYSQQQNSPQKHKNKDLYTTGRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPXXXXXXXXXXXX TPVQYSQQQNS(1)PQK T(-139.82)PVQY(-144.25)S(-98.05)QQQNS(98.05)PQK 11 3 0.27592 29959 0 0 22066 0 0 33277 0 0 19483 0 0 9990.2 0 0 30842 0 0 12668 0 0 23181 0 0 21106 0 0 5975.5 0 0 28361 0 0 20830 0 0 33037 0 0 20345 0 0 11559 0 0 30323 0 0 12997 0 0 23729 0 0 20467 0 0 6163.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 115310000 115310000 0 0 NaN 995 603 357 357 4865 5190 5529 6147 5529 6147 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10354 5529 6147 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10354 5529 6147 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10354 P46019 729 P46019 P46019 Phosphorylase b kinase regulatory subunit alpha, liver isoform PHKA2 sp|P46019|KPB2_HUMAN Phosphorylase b kinase regulatory subunit alpha, liver isoform OS=Homo sapiens GN=PHKA2 PE=1 SV=1 0.995558 23.5051 8.1748E-05 122.53 89.58 122.53 1 S VPMTLPTKVLSAHRKSLNLVDSPQPLLEKVP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPXX S(0.996)LNLVDS(0.004)PQPLLEK S(23.51)LNLVDS(-23.51)PQPLLEK 1 3 -0.049782 7227 0 0 3594 0 0 6692.6 0 0 4855.9 0 0 13089 0 0 7607.9 0 0 13677 0 0 9253.3 0 0 5106.2 0 0 8002.4 0 0 6836.6 0 0 3402.3 0 0 6849.2 0 0 4953.1 0 0 12905 0 0 7538.6 0 0 13659 0 0 9459.1 0 0 5401.8 0 0 7749.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17325000 17325000 0 0 NaN 996 604 729 729 3955 4214 4497 4999 4497 4999 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22258 4497 4999 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22258 4497 4999 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22258 P46060 428 P46060 P46060 Ran GTPase-activating protein 1 RANGAP1 sp|P46060|RAGP1_HUMAN Ran GTPase-activating protein 1 OS=Homo sapiens GN=RANGAP1 PE=1 SV=1 0.81831 6.68535 4.0822E-05 113.37 96.402 113.37 1 S KILDPNTGEPAPVLSSPPPADVSTFLAFPSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP ILDPNTGEPAPVLS(0.176)S(0.818)PPPADVS(0.003)T(0.003)FLAFPSPEK ILDPNT(-42.74)GEPAPVLS(-6.69)S(6.69)PPPADVS(-24.29)T(-24.29)FLAFPS(-51.5)PEK 15 4 -0.31892 16505 0 0 19892 0 0 11637 0 0 16544 0 0 6417 0 0 11040 0 0 6691.6 0 0 16303 0 0 15599 0 0 50556 0 0 15599 0 0 18772 0 0 11934 0 0 17103 0 0 6832.5 0 0 11473 0 0 7042.2 0 0 17673 0 0 15014 0 0 47982 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 92477000 92477000 0 0 NaN 997 605 428 428 1874 1978 2136 2394 2136 2394 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23954 2136 2394 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23954 2136 2394 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23954 P46087 786 P46087 P46087 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase NOP2 sp|P46087|NOP2_HUMAN Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase OS=Homo sapiens GN=NOP2 PE=1 SV=2 0.999997 54.8387 6.28027E-10 177.36 138.48 177.36 1 S QKQNDTPKGPQPPTVSPIRSSRPPPAKRKKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX GPQPPTVS(1)PIR GPQPPT(-54.84)VS(54.84)PIR 8 2 0.83513 77367 0 0 72540 0 0 84013 0 0 65205 0 0 48577 0 0 80190 0 0 43224 0 0 67253 0 0 80634 0 0 9865.9 0 0 73234 0 0 68484 0 0 83770 0 0 67639 0 0 51348 0 0 79566 0 0 45280 0 0 68258 0 0 77975 0 0 10846 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 140980000 140980000 0 0 NaN 998 606 786 786 1558 1642 1775 1973 1775 1973 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12555 1775 1973 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12555 1775 1973 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12555 P46087 732 P46087 P46087 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase NOP2 sp|P46087|NOP2_HUMAN Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase OS=Homo sapiens GN=NOP2 PE=1 SV=2 0.998682 28.7945 8.57257E-07 139.81 119.43 139.81 1 S NAPPKGTDTQTPAVLSPSKTQATLKPKDHHQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPXXXXXXXXXXXX GTDTQTPAVLS(0.999)PS(0.001)K GT(-102.66)DT(-97.18)QT(-76.87)PAVLS(28.79)PS(-28.79)K 11 3 -0.49918 22371 0 0 23210 0 0 21620 0 0 20655 0 0 14258 0 0 21909 0 0 16739 0 0 22416 0 0 26518 0 0 5421.6 0 0 21166 0 0 21911 0 0 21727 0 0 21384 0 0 14948 0 0 21921 0 0 17188 0 0 22628 0 0 25751 0 0 5623.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 304240000 304240000 0 0 NaN 999 606 732 732 1651 1742 1883 2101 1883 2101 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13208 1883 2101 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13208 1883 2101 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13208 P46087 58 P46087 P46087 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase NOP2 sp|P46087|NOP2_HUMAN Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase OS=Homo sapiens GN=NOP2 PE=1 SV=2 1 44.4259 0.0421635 44.426 24.097 44.426 1 S LSSRARKRAAKRRLGSVEAPKTNKSPEAKPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX RLGS(1)VEAPK RLGS(44.43)VEAPK 4 3 0.26263 20313 0 0 13673 0 0 19041 0 0 13898 0 0 22079 0 0 21436 0 0 23749 0 0 19487 0 0 16137 0 0 1733.5 0 0 19216 0 0 12917 0 0 19287 0 0 14377 0 0 22243 0 0 21128 0 0 23886 0 0 19674 0 0 16245 0 0 2083.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16197000 16197000 0 0 NaN 1000 606 58 58 3311 3512 3749 4165 3749 4165 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11431 3749 4165 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11431 3749 4165 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11431 P46087 67 P46087 P46087 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase NOP2 sp|P46087|NOP2_HUMAN Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase OS=Homo sapiens GN=NOP2 PE=1 SV=2 0.740377 4.55109 0.0271936 52.555 29.638 52.555 1 S AKRRLGSVEAPKTNKSPEAKPLPGKLPKGIS X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX T(0.26)NKS(0.74)PEAK T(-4.55)NKS(4.55)PEAK 4 3 -1.0614 18497 0 0 12393 0 0 17489 0 0 13603 0 0 10858 0 0 18237 0 0 9412 0 0 13989 0 0 15055 0 0 2920.3 0 0 17499 0 0 11714 0 0 17584 0 0 13968 0 0 11395 0 0 18026 0 0 9804.6 0 0 14284 0 0 14615 0 0 3073.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13965000 13965000 0 0 NaN 1001 606 67 67 4804 5124 5463 6079 5463 6079 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7260 5463 6079 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7260 5463 6079 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7260 P46100 598 P46100 P46100 Transcriptional regulator ATRX ATRX sp|P46100|ATRX_HUMAN Transcriptional regulator ATRX OS=Homo sapiens GN=ATRX PE=1 SV=5 0.998692 28.8268 5.40064E-05 125.5 58.364 125.5 1 S TKELYVKLTPVSLSNSPIKGADCQEVPQDKD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPXXXXXXXXXXXX LTPVSLS(0.001)NS(0.999)PIK LT(-85.87)PVS(-72.97)LS(-28.83)NS(28.83)PIK 9 3 -1.5112 4514.3 0 0 6058.4 0 0 4510.1 0 0 5921.1 0 0 6244.8 0 0 5151.6 0 0 6374.8 0 0 6179.4 0 0 6789.9 0 0 4215.3 0 0 4271.7 0 0 5722.4 0 0 4563.2 0 0 6075.6 0 0 6237 0 0 5218.8 0 0 6494.1 0 0 6285.5 0 0 6682 0 0 4112.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16068000 16068000 0 0 NaN 1002 607 598 598 2632 2779 2980 3317 2980 3317 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19087 2980 3317 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19087 2980 3317 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19087 P46109 107 P46109 P46109 Crk-like protein CRKL sp|P46109|CRKL_HUMAN Crk-like protein OS=Homo sapiens GN=CRKL PE=1 SV=1 0.999984 48.0271 4.05069E-12 192.77 174.23 192.77 1 S YLDTTTLIEPAPRYPSPPMGSVSAPNLPTAE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP YPS(1)PPMGSVSAPNLPTAEDNLEYVR Y(-61.96)PS(48.03)PPMGS(-48.03)VS(-91.38)APNLPT(-168.9)AEDNLEY(-189.65)VR 3 3 -0.21479 4693.6 0 0 6300.6 0 0 4383 0 0 7270.8 0 0 5438.7 0 0 3922.5 0 0 5306.6 0 0 7090.9 0 0 5729.8 0 0 42587 0 0 4440.2 0 0 5957.5 0 0 4444 0 0 7352.4 0 0 5455.4 0 0 4201.1 0 0 5419.6 0 0 8273.1 0 0 5635.7 0 0 40265 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 69661000 69661000 0 0 NaN 1003 608 107 107 5411 5763;5764 6150;6151 6837;6838 6151 6838 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21020 6151 6838 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21020 6151 6838 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21020 P46379 1081 P46379 P46379 Large proline-rich protein BAG6 BAG6 sp|P46379|BAG6_HUMAN Large proline-rich protein BAG6 OS=Homo sapiens GN=BAG6 PE=1 SV=2 0.656875 6.31681 0.00586085 91.076 60.526 91.076 1 S AVSRAAKAAGARPLTSPESLSRDLEAPEVQE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPXXXXXXXXX AAGARPLT(0.153)S(0.657)PES(0.153)LS(0.036)R AAGARPLT(-6.32)S(6.32)PES(-6.32)LS(-12.57)R 9 2 0.16724 18446 0 0 18183 0 0 19690 0 0 19792 0 0 14122 0 0 18399 0 0 13166 0 0 18061 0 0 21084 0 0 9789.6 0 0 17459 0 0 17186 0 0 19685 0 0 20201 0 0 14653 0 0 18519 0 0 13665 0 0 18424 0 0 20468 0 0 9636 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8072100 8072100 0 0 NaN 1004 609 1081 1081 32 34 38 48 38 48 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11373 38 48 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11373 38 48 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11373 P46379 113 P46379 P46379 Large proline-rich protein BAG6 BAG6 sp|P46379|BAG6_HUMAN Large proline-rich protein BAG6 OS=Homo sapiens GN=BAG6 PE=1 SV=2 0.92506 11.2422 7.86367E-18 216.18 198.65 216.18 1 S ASSGTGSASATHGGGSPPGTRGPGASVHDRN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX APPQTHLPSGASSGTGSAS(0.002)AT(0.069)HGGGS(0.925)PPGT(0.004)R APPQT(-178.99)HLPS(-140.17)GAS(-99.83)S(-86.03)GT(-75.49)GS(-54.2)AS(-27.01)AT(-11.24)HGGGS(11.24)PPGT(-24.1)R 26 4 1.036 21949 0 0 23565 0 0 22096 0 0 21695 0 0 24140 0 0 19136 0 0 27457 0 0 23809 0 0 22765 0 0 21081 0 0 20770 0 0 22251 0 0 22272 0 0 22349 0 0 24419 0 0 19393 0 0 27662 0 0 24336 0 0 22661 0 0 20401 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 120160000 120160000 0 0 NaN 1005 609 113 113 364 390 422 467;468 422 467 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8395 422 467 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8395 422 467 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8395 P46379 973 P46379 P46379 Large proline-rich protein BAG6 BAG6 sp|P46379|BAG6_HUMAN Large proline-rich protein BAG6 OS=Homo sapiens GN=BAG6 PE=1 SV=2 0.999996 56.5955 1.10598E-22 269.63 248.9 269.63 1 S QGAERASPEPQRENASPAPGTTAEEAMSRGP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPXX ENAS(1)PAPGTTAEEAMSR ENAS(56.6)PAPGT(-56.6)T(-56.6)AEEAMS(-103.33)R 4 2 0.7479 11197 0 0 14419 0 0 10113 0 0 13516 0 0 8100.6 0 0 10058 0 0 7745.1 0 0 9899.7 0 0 13706 0 0 2909.3 0 0 10591 0 0 13616 0 0 10220 0 0 13877 0 0 8340 0 0 10240 0 0 8064.1 0 0 10024 0 0 13271 0 0 2968.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29559000 29559000 0 0 NaN 1006 609 973 973 1068 1126 1214 1335 1214 1335 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11012 1214 1335 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11012 1214 1335 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11012 P46379 1117 P46379 P46379 Large proline-rich protein BAG6 BAG6 sp|P46379|BAG6_HUMAN Large proline-rich protein BAG6 OS=Homo sapiens GN=BAG6 PE=1 SV=2 1 123.602 2.39104E-16 240.46 199.67 240.46 1 S LRSDIQKRLQEDPNYSPQRFPNAQRAFADDP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPXXXXXX LQEDPNYS(1)PQRFPNAQR LQEDPNY(-123.6)S(123.6)PQRFPNAQR 8 3 0.069837 43661 0 0 61116 0 0 43955 0 0 60797 0 0 87192 0 0 48013 0 0 86487 0 0 72123 0 0 70291 0 0 53312 0 0 41315 0 0 57732 0 0 44771 0 0 62238 0 0 85905 0 0 49099 0 0 87627 0 0 73017 0 0 70043 0 0 51869 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 70023000 70023000 0 0 NaN 1007 609 1117 1117 2520;2521 2662;2663 2858;2859 3188;3189 2859 3189 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12946 2859 3189 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12946 2859 3189 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12946 P46527 10 P46527 P46527 Cyclin-dependent kinase inhibitor 1B CDKN1B sp|P46527|CDN1B_HUMAN Cyclin-dependent kinase inhibitor 1B OS=Homo sapiens GN=CDKN1B PE=1 SV=1 0.795239 6.96349 0.0125853 77.527 62.853 77.527 1 S ______MSNVRVSNGSPSLERMDARQAEHPK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX VS(0.045)NGS(0.795)PS(0.16)LER VS(-12.5)NGS(6.96)PS(-6.96)LER 5 2 -0.021406 18647 0 0 15369 0 0 18031 0 0 16301 0 0 23151 0 0 19180 0 0 23312 0 0 19731 0 0 16470 0 0 4519.2 0 0 17642 0 0 14524 0 0 18254 0 0 16726 0 0 23187 0 0 19112 0 0 23535 0 0 19907 0 0 16541 0 0 4712 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10674000 10674000 0 0 NaN 1008 611 10 10 5254 5600 5970 6634 5970 6634 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8685 5970 6634 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8685 5970 6634 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8685 P46776 68 P46776 P46776 60S ribosomal protein L27a RPL27A sp|P46776|RL27A_HUMAN 60S ribosomal protein L27a OS=Homo sapiens GN=RPL27A PE=1 SV=2 0.999994 51.9627 5.08991E-05 126.26 80.724 126.26 1 S FGKVGMKHYHLKRNQSFCPTVNLDKLWTLVS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX NQS(1)FCPTVNLDK NQS(51.96)FCPT(-51.96)VNLDK 3 3 -0.46729 18253 0 0 9860.7 0 0 17055 0 0 6621.4 0 0 7911.6 0 0 18080 0 0 7629.4 0 0 12309 0 0 8743.5 0 0 9853.5 0 0 17268 0 0 9296.6 0 0 17130 0 0 7180.5 0 0 8565.6 0 0 17558 0 0 7810.1 0 0 12867 0 0 8580 0 0 9563.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17070000 17070000 0 0 NaN 1009 612 68 68 2897 3071 3289 3646 3289 3646 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16730 3289 3646 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16730 3289 3646 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16730 P46783;Q9NQ39 146;157 P46783 P46783 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like RPS10;RPS10P5 sp|P46783|RS10_HUMAN 40S ribosomal protein S10 OS=Homo sapiens GN=RPS10 PE=1 SV=1;sp|Q9NQ39|RS10L_HUMAN Putative 40S ribosomal protein S10-like OS=Homo sapiens GN=RPS10P5 PE=5 SV=1 0.968605 14.8929 8.16547E-05 129.1 110.48 118.16 1 S AVPPGADKKAEAGAGSATEFQFRGGFGRGRG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPXXXXXXXX KAEAGAGS(0.969)AT(0.031)EFQFR KAEAGAGS(14.89)AT(-14.89)EFQFR 8 3 -0.076357 45139 0 0 40337 0 0 45130 0 0 41292 0 0 44311 0 0 50041 0 0 40017 0 0 43489 0 0 47520 0 0 22692 0 0 42713 0 0 38110 0 0 45426 0 0 42479 0 0 44962 0 0 49729 0 0 41145 0 0 44560 0 0 46570 0 0 22373 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 46699000 46699000 0 0 NaN 1010 615 146 146 127;1994 133;2109 143;2273 158;2539 2273 2539 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14331 143 158 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15485 143 158 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15485 P46821 1793 P46821 P46821 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 MAP1B sp|P46821|MAP1B_HUMAN Microtubule-associated protein 1B OS=Homo sapiens GN=MAP1B PE=1 SV=2 0.577491 1.35709 4.11082E-16 231.42 201.29 231.42 1 S LSPKSDISPLTPRESSPLYSPTFSDSTSAVK X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP ES(0.423)S(0.577)PLYSPTFSDSTSAVK ES(-1.36)S(1.36)PLY(-77.7)S(-67.89)PT(-93.43)FS(-147.31)DS(-170.12)T(-185.76)S(-190.78)AVK 3 3 0.20267 5689.6 0 0 31867 0 0 5196.7 0 0 30876 0 0 5612.1 0 0 5589.4 0 0 7136.5 0 0 16488 0 0 34120 0 0 14424 0 0 5381.9 0 0 30098 0 0 5269.1 0 0 31357 0 0 5717.7 0 0 6895 0 0 7930 0 0 16551 0 0 32522 0 0 13964 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 44982000 44982000 0 0 NaN 1011 616 1793 1793 1169 1230 1327 1466 1327 1466 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17592 1327 1466 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17592 1327 1466 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17592 P46821 1797 P46821 P46821 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 MAP1B sp|P46821|MAP1B_HUMAN Microtubule-associated protein 1B OS=Homo sapiens GN=MAP1B PE=1 SV=2 0.987876 22.2786 1.45748E-06 138.04 120.55 138.04 1 S SDISPLTPRESSPLYSPTFSDSTSAVKEKTA X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPXXXX ES(0.006)S(0.005)PLYS(0.988)PT(0.001)FSDSTSAVK ES(-22.28)S(-23.15)PLY(-76.87)S(22.28)PT(-28.19)FS(-74.54)DS(-96.48)T(-95.76)S(-105.04)AVK 7 3 -0.2347 11347 0 0 26072 0 0 12530 0 0 26163 0 0 15915 0 0 13403 0 0 14901 0 0 19393 0 0 27429 0 0 30759 0 0 10742 0 0 24630 0 0 12589 0 0 26652 0 0 15948 0 0 14137 0 0 15559 0 0 20147 0 0 26533 0 0 29412 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 10451000 10451000 0 0 NaN 1012 616 1797 1797 1169 1230 1328 1467;1468 1328 1467 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17863 1328 1467 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17863 1328 1467 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17863 P46821 1427 P46821 P46821 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 MAP1B sp|P46821|MAP1B_HUMAN Microtubule-associated protein 1B OS=Homo sapiens GN=MAP1B PE=1 SV=2 1 97.4517 0.00262635 97.452 61.134 97.452 1 S SFLSADDKASGRGAESPFEEKSGKQGSPDQV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX GAES(1)PFEEK GAES(97.45)PFEEK 4 2 0.86095 10961 0 0 76448 0 0 10605 0 0 74446 0 0 14335 0 0 9702.4 0 0 11486 0 0 33925 0 0 85077 0 0 12288 0 0 10371 0 0 72206 0 0 10740 0 0 75521 0 0 14356 0 0 12942 0 0 13844 0 0 33461 0 0 80825 0 0 12356 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37383000 37383000 0 0 NaN 1013 616 1427 1427 1357 1431 1539 1702 1539 1702 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12688 1539 1702 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12688 1539 1702 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12688 P46821 1501 P46821 P46821 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 MAP1B sp|P46821|MAP1B_HUMAN Microtubule-associated protein 1B OS=Homo sapiens GN=MAP1B PE=1 SV=2 0.901822 9.63108 8.5627E-08 162.73 138.81 162.73 1 S SQPALALDERKLGDVSPTQIDVSQFGSFKED X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPXX KLGDVS(0.902)PT(0.098)QIDVSQFGSFK KLGDVS(9.63)PT(-9.63)QIDVS(-81.25)QFGS(-105.39)FK 6 3 0.18993 4906.2 0 0 19485 0 0 4601.9 0 0 16403 0 0 5220.9 0 0 5297.6 0 0 4919.9 0 0 10807 0 0 21061 0 0 34200 0 0 4641.4 0 0 18389 0 0 4658.3 0 0 16852 0 0 5272.6 0 0 5939.2 0 0 5464.5 0 0 11657 0 0 20096 0 0 32454 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13004000 13004000 0 0 NaN 1014 616 1501 1501 2114 2235 2408 2684 2408 2684 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21764 2408 2684 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21764 2408 2684 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21764 P46821 1438 P46821 P46821 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 MAP1B sp|P46821|MAP1B_HUMAN Microtubule-associated protein 1B OS=Homo sapiens GN=MAP1B PE=1 SV=2 0.99981 37.2225 3.83048E-06 136.66 116.59 136.66 1 S RGAESPFEEKSGKQGSPDQVSPVSEMTSTSL X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP QGS(1)PDQVSPVSEMTSTSLYQDK QGS(37.22)PDQVS(-37.22)PVS(-69.3)EMT(-103)S(-116.91)T(-116.46)S(-117.45)LY(-129.86)QDK 3 3 0.28391 4455.1 0 0 16140 0 0 5159.9 0 0 16136 0 0 6296.8 0 0 5685.9 0 0 5675.1 0 0 9230 0 0 17877 0 0 39993 0 0 4218.3 0 0 15247 0 0 5168 0 0 16400 0 0 6325.6 0 0 6285.4 0 0 6140.7 0 0 10326 0 0 17121 0 0 37871 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 10590000 10590000 0 0 NaN 1015 616 1438 1438 3041 3225 3450 3823;3824 3450 3824 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19471 3450 3824 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19471 3450 3824 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19471 P46821 1265 P46821 P46821 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 MAP1B sp|P46821|MAP1B_HUMAN Microtubule-associated protein 1B OS=Homo sapiens GN=MAP1B PE=1 SV=2 0.999667 34.7869 0.000181015 102.69 43.858 102.69 1 S KVSPSKSPSLSPSPPSPLEKTPLGERSVNFS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPXXXXXXXXXXX SPSLSPSPPS(1)PLEK S(-77.84)PS(-77.84)LS(-62.68)PS(-34.79)PPS(34.79)PLEK 10 3 -0.1043 5053.5 0 0 9600.8 0 0 5032.3 0 0 8837.3 0 0 4756.5 0 0 5564.6 0 0 5741.5 0 0 6992.8 0 0 9573.3 0 0 4725.3 0 0 4781.8 0 0 9065.2 0 0 5066.9 0 0 9067.9 0 0 4860.7 0 0 5750.6 0 0 5902 0 0 7101.3 0 0 9283.4 0 0 4611.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7878400 7878400 0 0 NaN 1016 616 1265 1265 4179 4454 4747 5266 4747 5266 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16010 4747 5266 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16010 4747 5266 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16010 P46821 1915 P46821 P46821 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 MAP1B sp|P46821|MAP1B_HUMAN Microtubule-associated protein 1B OS=Homo sapiens GN=MAP1B PE=1 SV=2 0.675657 3.74131 3.49182E-16 235.76 207.55 235.76 1 S DVGGYYYEKIERTTKSPSDSGYSYETIGKTT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPXX T(0.007)T(0.032)KS(0.676)PS(0.285)DSGYSYETIGK T(-19.92)T(-13.3)KS(3.74)PS(-3.74)DS(-33.1)GY(-121.48)S(-64.46)Y(-132.09)ET(-104.34)IGK 4 3 0.77908 7593 0 0 41048 0 0 7677.3 0 0 37290 0 0 8330 0 0 6824.3 0 0 10187 0 0 18940 0 0 43573 0 0 10877 0 0 7185.3 0 0 38756 0 0 7737.3 0 0 38028 0 0 8472.5 0 0 8372.5 0 0 11194 0 0 18857 0 0 41578 0 0 10680 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21970000 21970000 0 0 NaN 1017 616 1915 1915 4978 5307 5654 6283 5654 6283 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14174 5654 6283 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14174 5654 6283 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14174 P46821 1965 P46821 P46821 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 MAP1B sp|P46821|MAP1B_HUMAN Microtubule-associated protein 1B OS=Homo sapiens GN=MAP1B PE=1 SV=2 0.99042 20.3778 1.09811E-07 173.25 128.26 173.25 1 S PEEGGYSYDISEKTTSPPEVSGYSYEKTERS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX TT(0.009)S(0.99)PPEVSGYSYEK T(-38.12)T(-20.38)S(20.38)PPEVS(-34.71)GY(-108.56)S(-48.84)Y(-102.33)EK 3 2 0.65387 2783.4 0 0 14385 0 0 3431.5 0 0 13143 0 0 3546.8 0 0 3621 0 0 3256.5 0 0 7126.2 0 0 15657 0 0 12451 0 0 2636.2 0 0 13582 0 0 3418.9 0 0 13418 0 0 3600.1 0 0 4122 0 0 3668.4 0 0 7387.4 0 0 14923 0 0 11889 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9400600 9400600 0 0 NaN 1018 616 1965 1965 4988 5317 5665 6294 5665 6294 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14527 5665 6294 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14527 5665 6294 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14527 P46821 1779 P46821 P46821 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 MAP1B sp|P46821|MAP1B_HUMAN Microtubule-associated protein 1B OS=Homo sapiens GN=MAP1B PE=1 SV=2 0.999897 39.8705 0.00146919 97.284 77.706 97.284 1 S SLTSEKVQSLEGEKLSPKSDISPLTPRESSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX VQSLEGEKLS(1)PK VQS(-39.87)LEGEKLS(39.87)PK 10 3 -0.67798 7636 0 0 31943 0 0 7369.9 0 0 31729 0 0 7819.8 0 0 7083.3 0 0 5929.8 0 0 15875 0 0 35213 0 0 5986.5 0 0 7224.6 0 0 30174 0 0 7438.3 0 0 32195 0 0 7909.9 0 0 8321.5 0 0 6928.7 0 0 15764 0 0 33503 0 0 6004.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19786000 19786000 0 0 NaN 1019 616 1779 1779 5228 5573 5941 6605 5941 6605 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15051 5941 6605 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15051 5941 6605 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15051 P46940 1443 P46940 P46940 Ras GTPase-activating-like protein IQGAP1 IQGAP1 sp|P46940|IQGA1_HUMAN Ras GTPase-activating-like protein IQGAP1 OS=Homo sapiens GN=IQGAP1 PE=1 SV=1 0.987321 19.8232 3.84984E-07 164.94 139.53 89.011 1 S AIRDAKTPDKMKKSKSVKEDSNLTLQEKKEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX S(0.987)VKEDS(0.01)NLT(0.002)LQEK S(19.82)VKEDS(-19.82)NLT(-26.15)LQEK 1 3 2.3263 29403 0 0 31247 0 0 30809 0 0 33013 0 0 17134 0 0 31456 0 0 16103 0 0 28567 0 0 35513 0 0 50771 0 0 27828 0 0 29528 0 0 30773 0 0 33764 0 0 18199 0 0 31659 0 0 16973 0 0 30296 0 0 34217 0 0 48468 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 43475000 43475000 0 0 NaN 1020 617 1443 1443 3914;4555 4172;4859 4453;5176 4951;5748 5176 5748 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13914 4453 4951 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13228 4453 4951 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13228 P47712 729 P47712 P47712 Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase PLA2G4A sp|P47712|PA24A_HUMAN Cytosolic phospholipase A2 OS=Homo sapiens GN=PLA2G4A PE=1 SV=2 0.889215 10.5381 1.22496E-06 143.58 96.623 143.58 1 S ESIEYRRQNPSRCSVSLSNVEARRFFNKEFL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX CS(0.032)VS(0.889)LS(0.079)NVEAR CS(-14.41)VS(10.54)LS(-10.54)NVEAR 4 2 -0.38985 25269 0 0 17440 0 0 23177 0 0 18168 0 0 38636 0 0 25182 0 0 40245 0 0 29840 0 0 17137 0 0 15791 0 0 23903 0 0 16479 0 0 23651 0 0 18722 0 0 38296 0 0 25016 0 0 40256 0 0 30227 0 0 17889 0 0 15560 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14619000 14619000 0 0 NaN 1021 618 729 729 624 665 709 785 709 785 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12948 709 785 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12948 709 785 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12948 P47914 158 P47914 P47914 60S ribosomal protein L29 RPL29 sp|P47914|RL29_HUMAN 60S ribosomal protein L29 OS=Homo sapiens GN=RPL29 PE=1 SV=2 0.998906 29.607 0.0126988 76.311 57.531 76.311 1 S VPAQAPKRTQAPTKASE______________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPXXXXXXXXXXXXXX RTQAPT(0.001)KAS(0.999)E RT(-69.11)QAPT(-29.61)KAS(29.61)E 9 3 -0.40692 14366 0 0 9946.1 0 0 16215 0 0 11038 0 0 7856.2 0 0 13802 0 0 7782.4 0 0 12433 0 0 11612 0 0 1979.8 0 0 13601 0 0 9401.9 0 0 16118 0 0 11311 0 0 8468.6 0 0 13698 0 0 8030.2 0 0 12584 0 0 11295 0 0 2152 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 49103000 49103000 0 0 NaN 1022 622 158 158 3528 3745 3991 4431 3991 4431 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6233 3991 4431 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6233 3991 4431 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6233 P47914 31 P47914 P47914 60S ribosomal protein L29 RPL29 sp|P47914|RL29_HUMAN 60S ribosomal protein L29 OS=Homo sapiens GN=RPL29 PE=1 SV=2 0.999211 31.0247 0.00856035 73.834 58.632 73.834 1 S WHRNGIKKPRSQRYESLKGVDPKFLRNMRFA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX Y(0.001)ES(0.999)LKGVDPK Y(-31.02)ES(31.02)LKGVDPK 3 3 -1.0238 20650 0 0 18730 0 0 23862 0 0 17411 0 0 13110 0 0 24169 0 0 10459 0 0 17840 0 0 18646 0 0 13163 0 0 19552 0 0 17686 0 0 23706 0 0 18066 0 0 13909 0 0 23870 0 0 10998 0 0 18537 0 0 18051 0 0 12808 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23093000 23093000 0 0 NaN 1023 622 31 31 5367 5717 6096 6775 6096 6775 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14758 6096 6775 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14758 6096 6775 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14758 P48357 882 P48357 P48357 Leptin receptor LEPR sp|P48357|LEPR_HUMAN Leptin receptor OS=Homo sapiens GN=LEPR PE=1 SV=2 1 149.216 2.88756E-07 149.22 118.89 149.22 1 S MKKLFWEDVPNPKNCSWAQGLNFQKPETFEH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX NCS(1)WAQGLNFQK NCS(149.22)WAQGLNFQK 3 3 1.3943 3066 0 0 17064 0 0 3158.5 0 0 18851 0 0 5659.9 0 0 3865.7 0 0 6291.6 0 0 8345.7 0 0 19630 0 0 6406.3 0 0 2901.6 0 0 16130 0 0 3206.9 0 0 19005 0 0 5617.5 0 0 4611.9 0 0 6739.2 0 0 8390.8 0 0 18803 0 0 6225.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 32049000 32049000 0 0 NaN 1024 623 882 882 2787 2956 3166 3517 3166 3517 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19479 3166 3517 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19479 3166 3517 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19479 P48634 1310 P48634 P48634 Protein PRRC2A PRRC2A sp|P48634|PRC2A_HUMAN Protein PRRC2A OS=Homo sapiens GN=PRRC2A PE=1 SV=3 0.501484 0.0257843 2.42936E-57 378.08 366.84 378.08 1 S VAPAPRRAAAKSPDLSNQNSDQANEEWETAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPPPPPP AAAKS(0.499)PDLS(0.501)NQNSDQANEEWETASESSDFTSER AAAKS(-0.03)PDLS(0.03)NQNS(-59.1)DQANEEWET(-298.17)AS(-312.15)ES(-323.15)S(-327.62)DFT(-339.61)S(-342.86)ER 9 4 0.92304 1180.5 0 0 2206.3 0 0 1423.7 0 0 1748.5 0 0 533.37 0 0 1613.1 0 0 1303.3 0 0 2378.9 0 0 1795.1 0 0 26699 0 0 1118 0 0 2081.6 0 0 1410.2 0 0 1821 0 0 605.19 0 0 1682.8 0 0 1303.2 0 0 3161 0 0 1750.4 0 0 25195 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22133000 22133000 0 0 NaN 1025 624 1310 1310 6 7 10 17 10 17 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15720 10 17 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15720 10 17 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15720 P48634 1147 P48634 P48634 Protein PRRC2A PRRC2A sp|P48634|PRC2A_HUMAN Protein PRRC2A OS=Homo sapiens GN=PRRC2A PE=1 SV=3 0.999988 49.5486 0.00850743 79.408 62.039 79.408 1 S LTQVPLAPPPPGAPPSPAPARFTARGGRVFT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX EGTLTQVPLAPPPPGAPPS(1)PAPAR EGT(-60.62)LT(-49.55)QVPLAPPPPGAPPS(49.55)PAPAR 19 3 3.3068 7445.1 0 0 7807 0 0 4871.1 0 0 7256.9 0 0 5439.7 0 0 5036.6 0 0 4933.2 0 0 6269.7 0 0 8267.7 0 0 27431 0 0 7035.3 0 0 7371.9 0 0 5058.9 0 0 7449 0 0 5482.7 0 0 5214.7 0 0 5137.2 0 0 7067.8 0 0 8016.3 0 0 25975 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18308000 18308000 0 0 NaN 1026 624 1147 1147 982 1037 1123 1238 1123 1238 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18024 1123 1238 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18024 1123 1238 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18024 P48634 761 P48634 P48634 Protein PRRC2A PRRC2A sp|P48634|PRC2A_HUMAN Protein PRRC2A OS=Homo sapiens GN=PRRC2A PE=1 SV=3 0.839287 9.82785 0.0475805 41.615 22.557 41.615 1 S PGVHPSGLVPRERSDSGGSSSEPFDRHAPAM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPXXXXX ERS(0.087)DS(0.839)GGS(0.02)S(0.022)S(0.031)EPFDR ERS(-9.83)DS(9.83)GGS(-16.3)S(-15.73)S(-14.29)EPFDR 5 3 0.61686 22071 0 0 25983 0 0 23013 0 0 29840 0 0 22995 0 0 24946 0 0 26631 0 0 26072 0 0 31592 0 0 4770.2 0 0 20888 0 0 24567 0 0 23126 0 0 30324 0 0 23392 0 0 25246 0 0 27069 0 0 26252 0 0 30961 0 0 5095.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16092000 16092000 0 0 NaN 1027 624 761 761 1131 1190 1280 1407 1280 1407 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7832 1280 1407 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7832 1280 1407 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7832 P48634 380 P48634 P48634 Protein PRRC2A PRRC2A sp|P48634|PRC2A_HUMAN Protein PRRC2A OS=Homo sapiens GN=PRRC2A PE=1 SV=3 0.939453 11.9078 6.37841E-07 144.5 117.54 144.5 1 S SGEERPPEADGKKGNSPNSEPPTPKTAWAET X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX KGNS(0.939)PNS(0.061)EPPTPK KGNS(11.91)PNS(-11.91)EPPT(-81.61)PK 4 3 0.36032 29054 0 0 26462 0 0 30713 0 0 25326 0 0 23419 0 0 29846 0 0 25455 0 0 27823 0 0 27098 0 0 5798.7 0 0 27499 0 0 24991 0 0 30745 0 0 26146 0 0 24227 0 0 29700 0 0 25859 0 0 28161 0 0 26668 0 0 6104.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 34475000 34475000 0 0 NaN 1028 624 380 380 2069 2189 2357 2627 2357 2627 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8729 2357 2627 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8729 2357 2627 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8729 P48634 456 P48634 P48634 Protein PRRC2A PRRC2A sp|P48634|PRC2A_HUMAN Protein PRRC2A OS=Homo sapiens GN=PRRC2A PE=1 SV=3 0.976124 16.29 5.36104E-07 149.53 120.51 149.53 1 S APEDEDEAWRQRRKQSSSEISLAVERARRRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX KQS(0.976)S(0.023)S(0.001)EISLAVER KQS(16.29)S(-16.29)S(-30.16)EIS(-68.67)LAVER 3 3 0.34518 11645 0 0 12840 0 0 13345 0 0 15119 0 0 14574 0 0 12354 0 0 15777 0 0 14850 0 0 15137 0 0 5758.7 0 0 11025 0 0 12143 0 0 13357 0 0 15341 0 0 14734 0 0 12548 0 0 15984 0 0 14972 0 0 14963 0 0 5766.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 48071000 48071000 0 0 NaN 1029 624 456 456 2188 2312 2489 2771 2489 2771 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13394 2489 2771 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13394 2489 2771 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13394 P48634 808 P48634 P48634 Protein PRRC2A PRRC2A sp|P48634|PRC2A_HUMAN Protein PRRC2A OS=Homo sapiens GN=PRRC2A PE=1 SV=3 0.995071 23.0508 2.14526E-42 325.36 295.63 325.36 1 S GDVFTATPAEPRPLTSPLRQAADEDDKGMRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX LAWVGDVFTATPAEPRPLT(0.005)S(0.995)PLR LAWVGDVFT(-132.51)AT(-98.17)PAEPRPLT(-23.05)S(23.05)PLR 20 3 -0.55379 91404 0 0 95496 0 0 95009 0 0 101820 0 0 60101 0 0 92711 0 0 59374 0 0 85809 0 0 113590 0 0 116080 0 0 86505 0 0 90248 0 0 95033 0 0 104010 0 0 63093 0 0 93468 0 0 61958 0 0 89838 0 0 109780 0 0 111290 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 418730000 418730000 0 0 NaN 1030 624 808 808 2303;2982 2432;3161 2621;3384 2929;3754 2621 2929 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23560 2621 2929 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23560 2621 2929 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23560 P48634 1219 P48634 P48634 Protein PRRC2A PRRC2A sp|P48634|PRC2A_HUMAN Protein PRRC2A OS=Homo sapiens GN=PRRC2A PE=1 SV=3 1 190.679 3.95638E-10 190.68 132.45 190.68 1 S PSKEPLKEKLIPGPLSPVARGGSNGGSNVGM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX LIPGPLS(1)PVAR LIPGPLS(190.68)PVAR 7 2 -0.33046 11812 0 0 12375 0 0 12228 0 0 12231 0 0 7511.2 0 0 10444 0 0 8706.4 0 0 11097 0 0 11683 0 0 12387 0 0 11179 0 0 11689 0 0 12233 0 0 12538 0 0 7920.6 0 0 10580 0 0 8886.5 0 0 11479 0 0 11401 0 0 11920 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 363320000 363320000 0 0 NaN 1031 624 1219 1219 2408 2545 2738 3058 2738 3058 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20677 2738 3058 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20677 2738 3058 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20677 P48634 1384 P48634 P48634 Protein PRRC2A PRRC2A sp|P48634|PRC2A_HUMAN Protein PRRC2A OS=Homo sapiens GN=PRRC2A PE=1 SV=3 0.648621 2.72907 0.0241114 61.042 30.17 61.042 1 S SRGDLSQRAKDLSKRSFSSQRPGMERQNRRP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPXXXXX S(0.649)FS(0.346)S(0.005)QRPGMER S(2.73)FS(-2.73)S(-20.82)QRPGMER 1 2 -1.3323 13638 0 0 14815 0 0 12441 0 0 16824 0 0 10824 0 0 13223 0 0 10754 0 0 11183 0 0 14819 0 0 7195.4 0 0 12901 0 0 14007 0 0 12576 0 0 17093 0 0 11083 0 0 13402 0 0 11062 0 0 11513 0 0 14450 0 0 7034.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9906200 9906200 0 0 NaN 1032 624 1384 1384 3765 4006 4271 4746 4271 4746 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8765 4271 4746 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8765 4271 4746 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8765 P48634 1670 P48634 P48634 Protein PRRC2A PRRC2A sp|P48634|PRC2A_HUMAN Protein PRRC2A OS=Homo sapiens GN=PRRC2A PE=1 SV=3 0.9054 9.80949 0.00155038 102.01 36.786 102.01 1 S LSGDSQVSSGPCSQRSSPDGGLKGAAEGPPK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX S(0.905)S(0.095)PDGGLK S(9.81)S(-9.81)PDGGLK 1 2 -1.8974 36902 0 0 22558 0 0 33734 0 0 23080 0 0 19086 0 0 38781 0 0 18787 0 0 25575 0 0 24657 0 0 6545.6 0 0 34907 0 0 21313 0 0 33971 0 0 23919 0 0 20234 0 0 38018 0 0 19299 0 0 26363 0 0 24080 0 0 6755.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16704000 16704000 0 0 NaN 1033 624 1670 1670 4375 4661 4965 5510 4965 5510 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9921 4965 5510 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9921 4965 5510 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9921 P48634 1085 P48634 P48634 Protein PRRC2A PRRC2A sp|P48634|PRC2A_HUMAN Protein PRRC2A OS=Homo sapiens GN=PRRC2A PE=1 SV=3 0.872999 9.18359 2.01104E-07 160.36 133.63 160.36 2 S TGGPNHPPAPRGRTASETRSEGSEYEEIPKR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX T(0.105)AS(0.873)ET(0.092)RS(0.901)EGS(0.028)EYEEIPK T(-9.18)AS(9.18)ET(-10.95)RS(10.95)EGS(-15.03)EY(-50.51)EEIPK 3 3 0.18221 0 13963 0 0 12750 0 0 14397 0 0 12853 0 0 10496 0 0 15914 0 0 11146 0 0 12547 0 0 13809 0 0 14501 0 0 13214 0 0 12045 0 0 14425 0 0 13240 0 0 10893 0 0 15799 0 0 11387 0 0 13153 0 0 13513 0 0 13945 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 14446000 0 14446000 0 NaN 1034 624 1085 1085 4627 4935;4936 5258 5840 5258 5840 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13866 5258 5840 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13866 5258 5840 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13866 P48634 1089 P48634 P48634 Protein PRRC2A PRRC2A sp|P48634|PRC2A_HUMAN Protein PRRC2A OS=Homo sapiens GN=PRRC2A PE=1 SV=3 0.901105 10.9494 3.61964E-08 172.8 143.66 160.36 1;2 S NHPPAPRGRTASETRSEGSEYEEIPKRRRQR X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPXXXXX T(0.105)AS(0.873)ET(0.092)RS(0.901)EGS(0.028)EYEEIPK T(-9.18)AS(9.18)ET(-10.95)RS(10.95)EGS(-15.03)EY(-50.51)EEIPK 7 3 0.18221 12339 13963 0 17530 12750 0 11823 14397 0 17963 12853 0 13675 10496 0 12994 15914 0 15078 11146 0 16482 12547 0 18763 13809 0 9088.5 14501 0 11674 13214 0 16562 12045 0 11960 14425 0 18338 13240 0 13792 10893 0 13307 15799 0 15381 11387 0 16671 13153 0 18357 13513 0 8939.4 13945 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 29307000 14861000 14446000 0 NaN 1035 624 1089 1089 4627 4935;4936 5257;5258 5839;5840 5258 5840 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13866 5257 5839 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12509 5257 5839 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12509 P48634 932 P48634 P48634 Protein PRRC2A PRRC2A sp|P48634|PRC2A_HUMAN Protein PRRC2A OS=Homo sapiens GN=PRRC2A PE=1 SV=3 0.632098 2.35052 0.00862637 73.435 54.81 73.435 1 S RRESRTETRWGPRPGSSRRGIPPEEPGAPPR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX WGPRPGS(0.632)S(0.368)R WGPRPGS(2.35)S(-2.35)R 7 3 -0.14082 22096 0 0 29310 0 0 21392 0 0 28566 0 0 16784 0 0 21274 0 0 17702 0 0 23021 0 0 30429 0 0 1677.3 0 0 20906 0 0 27684 0 0 21526 0 0 29259 0 0 17330 0 0 21674 0 0 18324 0 0 23074 0 0 29485 0 0 2112.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 41973000 41973000 0 0 NaN 1036 624 932 932 5337 5685 6063 6737 6063 6737 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9228 6063 6737 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9228 6063 6737 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9228 P48637 415 P48637 P48637 Glutathione synthetase GSS sp|P48637|GSHB_HUMAN Glutathione synthetase OS=Homo sapiens GN=GSS PE=1 SV=1 1 131.322 1.3784E-05 131.32 94.725 131.32 1 S KIEPEPFENCLLRPGSPARVVQCISELGIFG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX IEPEPFENCLLRPGS(1)PAR IEPEPFENCLLRPGS(131.32)PAR 15 3 -0.25615 6614.1 0 0 10984 0 0 7451.1 0 0 9957.6 0 0 10154 0 0 8374.4 0 0 10109 0 0 9220.4 0 0 11163 0 0 11973 0 0 6261.8 0 0 10370 0 0 7487.7 0 0 10261 0 0 10145 0 0 8497.9 0 0 10321 0 0 9576.7 0 0 10970 0 0 11487 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26554000 26554000 0 0 NaN 1037 625 415 415 1819 1920 2074 2324 2074 2324 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19623 2074 2324 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19623 2074 2324 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19623 P48651 442 P48651 P48651 Phosphatidylserine synthase 1 PTDSS1 sp|P48651|PTSS1_HUMAN Phosphatidylserine synthase 1 OS=Homo sapiens GN=PTDSS1 PE=1 SV=1 0.999985 48.1783 0.0012739 108.7 92.026 108.7 1 S EISWHHRKGTKGSEDSPPKHAGNNESHSSRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX GSEDS(1)PPK GS(-48.18)EDS(48.18)PPK 5 2 1.1149 24541 0 0 18101 0 0 22411 0 0 17992 0 0 18134 0 0 25190 0 0 19940 0 0 20720 0 0 17134 0 0 4044 0 0 23214 0 0 17099 0 0 22640 0 0 18595 0 0 18678 0 0 24880 0 0 20134 0 0 21078 0 0 17026 0 0 4287.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18447000 18447000 0 0 NaN 1038 627 442 442 1597 1683 1819 2022 1819 2022 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7426 1819 2022 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7426 1819 2022 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7426 P48681 768 P48681 P48681 Nestin NES sp|P48681|NEST_HUMAN Nestin OS=Homo sapiens GN=NES PE=1 SV=2 0.999996 54.4095 0.000703034 99.846 68.426 99.846 1 S ETLRTLEKETQQRRRSLGEQDQMTLRPPEKV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPX S(1)LGEQDQMTLRPPEK S(54.41)LGEQDQMT(-54.41)LRPPEK 1 3 1.4486 6373.5 0 0 19877 0 0 6894.6 0 0 17416 0 0 7234.2 0 0 6205.5 0 0 7290.5 0 0 10575 0 0 18303 0 0 9262.9 0 0 6032.9 0 0 18763 0 0 6916.8 0 0 17852 0 0 7332.5 0 0 6792.7 0 0 7719.9 0 0 10718 0 0 17592 0 0 8966.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10963000 10963000 0 0 NaN 1039 628 768 768 3934 4193 4475 4974 4475 4974 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15336 4475 4974 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15336 4475 4974 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15336 P48730 383 P48730 P48730 Casein kinase I isoform delta CSNK1D sp|P48730|KC1D_HUMAN Casein kinase I isoform delta OS=Homo sapiens GN=CSNK1D PE=1 SV=2 0.520816 0.99215 0.00028605 104.66 82.617 104.66 1 S KVSMRLHRGAPVNISSSDLTGRQDTSRMSTS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPXXXXXXXXX GAPVNIS(0.414)S(0.521)S(0.064)DLTGR GAPVNIS(-0.99)S(0.99)S(-9.08)DLT(-31.76)GR 8 2 -0.47309 15755 0 0 14742 0 0 17269 0 0 17428 0 0 14029 0 0 15430 0 0 14128 0 0 16414 0 0 17176 0 0 19242 0 0 14914 0 0 13942 0 0 17262 0 0 17698 0 0 14432 0 0 15604 0 0 14460 0 0 17006 0 0 16818 0 0 18499 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17587000 17587000 0 0 NaN 1040 629 383 383 1370 1445 1553 1717 1553 1717 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15182 1553 1717 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15182 1553 1717 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15182 P48960 831 P48960 P48960 CD97 antigen;CD97 antigen subunit alpha;CD97 antigen subunit beta CD97 sp|P48960|CD97_HUMAN CD97 antigen OS=Homo sapiens GN=CD97 PE=1 SV=4 0.949903 12.7787 6.13081E-06 147.62 122.24 147.62 1 S TTSGTGHNQTRALRASESGI___________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX ALRAS(0.95)ES(0.05)GI ALRAS(12.78)ES(-12.78)GI 5 2 0.53594 61151 0 0 9784.1 0 0 59614 0 0 10791 0 0 8569.8 0 0 63924 0 0 13596 0 0 24731 0 0 12751 0 0 4750.7 0 0 57859 0 0 9248.4 0 0 59501 0 0 11873 0 0 11781 0 0 61220 0 0 13575 0 0 26469 0 0 12617 0 0 5045.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 143390000 143390000 0 0 NaN 1041 630 831 831 308 329 350 390 350 390 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12980 350 390 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12980 350 390 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12980 P49006 151 P49006 P49006 MARCKS-related protein MARCKSL1 sp|P49006|MRP_HUMAN MARCKS-related protein OS=Homo sapiens GN=MARCKSL1 PE=1 SV=2 0.998939 29.7374 0.000177561 118.52 95.51 118.52 1 S DEGTAQEGKAAATPESQEPQAKGAEASAASE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPXXXXXXXXX AAAT(0.001)PES(0.999)QEPQAK AAAT(-29.74)PES(29.74)QEPQAK 7 3 -0.48305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1042 631 151 151 12 13 16 23 16 23 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8454 16 23 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8454 16 23 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8454 P49006 22 P49006 P49006 MARCKS-related protein MARCKSL1 sp|P49006|MRP_HUMAN MARCKS-related protein OS=Homo sapiens GN=MARCKSL1 PE=1 SV=2 1 102.542 2.19664E-05 133.93 115.1 133.93 1 S KAPRGDVTAEEAAGASPAKANGQENGHVKSN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX GDVTAEEAAGAS(1)PAK GDVT(-102.54)AEEAAGAS(102.54)PAK 12 3 0.25763 24426 0 0 67405 0 0 35626 0 0 64375 0 0 25195 0 0 35553 0 0 18169 0 0 45651 0 0 74780 0 0 28897 0 0 23155 0 0 63658 0 0 35088 0 0 65820 0 0 26138 0 0 37104 0 0 20382 0 0 46271 0 0 71385 0 0 28267 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 215920000 215920000 0 0 NaN 1043 631 22 22 1397 1473 1582 1747 1582 1747 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10367 1582 1747 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10367 1582 1747 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10367 P49006 101 P49006 P49006 MARCKS-related protein MARCKSL1 sp|P49006|MRP_HUMAN MARCKS-related protein OS=Homo sapiens GN=MARCKSL1 PE=1 SV=2 0.999872 38.9342 0.0314492 60.398 6.6415 60.398 1 S PKKKKKFSFKKPFKLSGLSFKRNRKEGGGDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPXXXXXXXXXX LS(1)GLSFK LS(38.93)GLS(-38.93)FK 2 2 -0.48391 9687.9 0 0 34479 0 0 7916.6 0 0 34975 0 0 8890 0 0 7162.4 0 0 8522.6 0 0 18634 0 0 39149 0 0 11001 0 0 9160.6 0 0 32574 0 0 8084.6 0 0 35434 0 0 8987.8 0 0 8585.1 0 0 9531.6 0 0 18578 0 0 37330 0 0 10790 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17811000 17811000 0 0 NaN 1044 631 101 101 2558;2559 2702;2703 2900 3234 2900 3234 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20973 2900 3234 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20973 2900 3234 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20973 P49006 104 P49006 P49006 MARCKS-related protein MARCKSL1 sp|P49006|MRP_HUMAN MARCKS-related protein OS=Homo sapiens GN=MARCKSL1 PE=1 SV=2 0.999837 37.8708 0.0138305 67.93 32.22 67.93 1 S KKKFSFKKPFKLSGLSFKRNRKEGGGDSSAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX LSGLS(1)FKR LS(-37.87)GLS(37.87)FKR 5 3 -0.28876 17238 0 0 35875 0 0 17061 0 0 31460 0 0 8613 0 0 15500 0 0 10478 0 0 18991 0 0 34212 0 0 1445.3 0 0 16311 0 0 33865 0 0 17090 0 0 32315 0 0 9288.1 0 0 16295 0 0 11227 0 0 18957 0 0 32751 0 0 1800.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1879700000 1879700000 0 0 NaN 1045 631 104 104 2558;2559 2702;2703 2901 3235 2901 3235 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16583 2901 3235 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16583 2901 3235 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16583 P49023 137 P49023 P49023 Paxillin PXN sp|P49023|PAXI_HUMAN Paxillin OS=Homo sapiens GN=PXN PE=1 SV=3 0.897179 9.4318 1.40022E-08 169.41 149.32 169.41 1 S NKQKSAEPSPTVMSTSLGSNLSELDRLLLEL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPPPPXXXXX SAEPSPTVMST(0.102)S(0.897)LGSNLSELDR S(-103.99)AEPS(-91.97)PT(-84.73)VMS(-33.79)T(-9.43)S(9.43)LGS(-37.08)NLS(-48.39)ELDR 12 3 0.42102 4078.1 0 0 3970.9 0 0 4453.9 0 0 4775 0 0 4351.1 0 0 3922.3 0 0 3032.3 0 0 4402.6 0 0 4793 0 0 16760 0 0 3860.3 0 0 3755.8 0 0 4459.4 0 0 4840 0 0 4404.6 0 0 4007.2 0 0 3198.1 0 0 4902.5 0 0 4654.5 0 0 15884 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10356000 10356000 0 0 NaN 1046 632 137 137 3578 3801 4054 4509 4054 4509 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20119 4054 4509 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20119 4054 4509 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20119 P49116 19 P49116 P49116 Nuclear receptor subfamily 2 group C member 2 NR2C2 sp|P49116|NR2C2_HUMAN Nuclear receptor subfamily 2 group C member 2 OS=Homo sapiens GN=NR2C2 PE=1 SV=1 0.999995 52.6652 7.02168E-07 143.52 131.93 143.52 1 S PSPRIQIISTDSAVASPQRIQIVTDQQTGQK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX IQIISTDSAVAS(1)PQR IQIIS(-83.42)T(-76.29)DS(-52.67)AVAS(52.67)PQR 12 3 0.33761 4235.9 0 0 11052 0 0 5390.2 0 0 11412 0 0 7623 0 0 4747.8 0 0 7579.6 0 0 7153 0 0 8943.7 0 0 5142.6 0 0 4012.5 0 0 10442 0 0 5388.5 0 0 11588 0 0 7604.7 0 0 5096.3 0 0 7754.8 0 0 7236.7 0 0 8766.8 0 0 5007.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14239000 14239000 0 0 NaN 1047 633 19 19 1922 2030 2191 2451 2191 2451 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17166 2191 2451 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17166 2191 2451 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17166 P49116 46 P49116 P49116 Nuclear receptor subfamily 2 group C member 2 NR2C2 sp|P49116|NR2C2_HUMAN Nuclear receptor subfamily 2 group C member 2 OS=Homo sapiens GN=NR2C2 PE=1 SV=1 0.999767 36.3263 4.76484E-08 174.02 159.33 174.02 1 S TGQKIQIVTAVDASGSPKQQFILTSPDGAGT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPXXXXXXXXXXXXX IQIVTAVDASGS(1)PK IQIVT(-123.84)AVDAS(-36.33)GS(36.33)PK 12 3 0.013704 5994.3 0 0 5281.5 0 0 6449.5 0 0 5844.6 0 0 6343.8 0 0 5940.5 0 0 6489.2 0 0 5028.7 0 0 5841.9 0 0 6702.6 0 0 5673.8 0 0 4992.5 0 0 6467.1 0 0 5968.2 0 0 6445.4 0 0 5951.3 0 0 6580.8 0 0 5281.4 0 0 5791.7 0 0 6427.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16193000 16193000 0 0 NaN 1048 633 46 46 1923 2031 2192 2452 2192 2452 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18814 2192 2452 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18814 2192 2452 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18814 P49207 12 P49207 P49207 60S ribosomal protein L34 RPL34 sp|P49207|RL34_HUMAN 60S ribosomal protein L34 OS=Homo sapiens GN=RPL34 PE=1 SV=3 0.999764 36.2917 2.69678E-07 172.43 134.71 172.43 1 S ____MVQRLTYRRRLSYNTASNKTRLSRTPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX RLS(1)YNTASNK RLS(36.29)Y(-61.5)NT(-36.29)AS(-96.47)NK 3 3 -0.11666 58365 0 0 37297 0 0 58852 0 0 32566 0 0 51596 0 0 53719 0 0 56518 0 0 45825 0 0 34930 0 0 3582.1 0 0 55230 0 0 35206 0 0 59153 0 0 34067 0 0 52837 0 0 52809 0 0 56703 0 0 46380 0 0 35381 0 0 4433.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 147130000 147130000 0 0 NaN 1049 634 12 12 3353 3555 3793 4211 3793 4211 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9923 3793 4211 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9923 3793 4211 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9923 P49321 726 P49321 P49321 Nuclear autoantigenic sperm protein NASP sp|P49321|NASP_HUMAN Nuclear autoantigenic sperm protein OS=Homo sapiens GN=NASP PE=1 SV=2 1 120.136 0.00033207 120.14 74.22 120.14 1 S DISHLVRKKRKPEEESPRKDDAKKAKQEPEV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX RKPEEES(1)PR RKPEEES(120.14)PR 7 3 -0.47769 27083 0 0 46077 0 0 29040 0 0 44512 0 0 33194 0 0 27325 0 0 29524 0 0 36861 0 0 46913 0 0 4567 0 0 25635 0 0 43519 0 0 29173 0 0 45523 0 0 33405 0 0 28285 0 0 30705 0 0 36743 0 0 45551 0 0 5153.5 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 121570000 121570000 0 0 NaN 1050 635 726 726 2152;3295 2274;3496 2448;3733 2726;4147 3733 4147 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5607 3733 4147 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5607 3733 4147 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5607 P49321 421 P49321 P49321 Nuclear autoantigenic sperm protein NASP sp|P49321|NASP_HUMAN Nuclear autoantigenic sperm protein OS=Homo sapiens GN=NASP PE=1 SV=2 0.99982 37.4503 7.42447E-05 135.08 100.33 135.08 1 S DGSGLEEKVRAKLVPSQEETKLSVEESEAAG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX LVPS(1)QEETK LVPS(37.45)QEET(-37.45)K 4 2 0.043451 17173 0 0 45032 0 0 18357 0 0 42409 0 0 41724 0 0 17183 0 0 38767 0 0 34319 0 0 47178 0 0 13530 0 0 16254 0 0 42525 0 0 18697 0 0 43299 0 0 40928 0 0 18589 0 0 39834 0 0 34168 0 0 46194 0 0 13534 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24834000 24834000 0 0 NaN 1051 635 421 421 2651 2798 2999 3337 2999 3337 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13431 2999 3337 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13431 2999 3337 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13431 P49327 974 P49327 P49327 Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase FASN sp|P49327|FAS_HUMAN Fatty acid synthase OS=Homo sapiens GN=FASN PE=1 SV=3 0.851809 7.59522 6.8993E-18 230.94 211.56 230.94 1 S YQWDDPDPRLFDHPESPTPNPTEPLFLAQAE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPPPP LFDHPES(0.852)PT(0.148)PNPTEPLFLAQAEVYK LFDHPES(7.6)PT(-7.6)PNPT(-67.92)EPLFLAQAEVY(-224.71)K 7 4 -0.89584 11825 0 0 13207 0 0 11876 0 0 13218 0 0 7904.9 0 0 10543 0 0 8998.8 0 0 13699 0 0 18626 0 0 132020 0 0 11190 0 0 12476 0 0 11909 0 0 13528 0 0 8281 0 0 10975 0 0 9371.1 0 0 17597 0 0 17970 0 0 124630 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 61143000 61143000 0 0 NaN 1052 636 974 974 2345 2478 2667 2979 2667 2979 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23481 2667 2979 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23481 2667 2979 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23481 P49327 207 P49327 P49327 Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase FASN sp|P49327|FAS_HUMAN Fatty acid synthase OS=Homo sapiens GN=FASN PE=1 SV=3 0.999989 49.6214 0.00243841 97.276 75.044 81.278 1 S LKPNTSVQFLRLGMLSPEGTCKAFDTAGNGY X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX LGMLS(1)PEGTCK LGMLS(49.62)PEGT(-49.62)CK 5 3 -0.38113 21144 0 0 27158 0 0 20535 0 0 25124 0 0 18742 0 0 20869 0 0 19311 0 0 24061 0 0 28971 0 0 22872 0 0 20005 0 0 25644 0 0 20692 0 0 25852 0 0 19143 0 0 21191 0 0 19894 0 0 24701 0 0 28176 0 0 22094 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 22696000 22696000 0 0 NaN 1053 636 207 207 2377 2513;2514 2705;2706 3023;3024 2705 3023 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14964 2706 3024 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18178 2706 3024 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18178 P49407 412 P49407 P49407 Beta-arrestin-1 ARRB1 sp|P49407|ARRB1_HUMAN Beta-arrestin-1 OS=Homo sapiens GN=ARRB1 PE=1 SV=2 0.929836 11.2229 6.74214E-08 155.14 137.76 155.14 1 S KGMKDDKEEEEDGTGSPQLNNR_________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPPPPXXXXXXXXX GMKDDKEEEEDGT(0.07)GS(0.93)PQLNNR GMKDDKEEEEDGT(-11.22)GS(11.22)PQLNNR 15 4 0.029749 18621 0 0 14175 0 0 19341 0 0 13856 0 0 36386 0 0 20954 0 0 38971 0 0 26069 0 0 15948 0 0 45484 0 0 17623 0 0 13389 0 0 19647 0 0 14361 0 0 35933 0 0 20836 0 0 38915 0 0 27321 0 0 16712 0 0 43432 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17950000 17950000 0 0 NaN 1054 637 412 412 1523 1604 1733 1925 1733 1925 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9693 1733 1925 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9693 1733 1925 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9693 P49450 17 P49450 P49450 Histone H3-like centromeric protein A CENPA sp|P49450|CENPA_HUMAN Histone H3-like centromeric protein A OS=Homo sapiens GN=CENPA PE=1 SV=1 0.987161 18.2192 0.0110035 76.378 58.872 76.378 2 S GPRRRSRKPEAPRRRSPSPTPTPGPSRRGPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX RRS(0.987)PS(0.864)PT(0.149)PTPGPSR RRS(18.22)PS(7.97)PT(-7.97)PT(-36.47)PGPS(-57.06)R 3 3 0.16004 0 4147.3 0 0 3454.6 0 0 3245.8 0 0 2933.7 0 0 4137 0 0 4263.7 0 0 3717.5 0 0 3801.4 0 0 4264 0 0 2254.3 0 0 3921 0 0 3260.4 0 0 3330.3 0 0 3065.4 0 0 4140.2 0 0 4212.8 0 0 3819.2 0 0 3899 0 0 4184.1 0 0 2210.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 14767000 0 14767000 0 NaN 1055 639 17 17 3452 3667 3910 4343 3910 4343 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5386 3910 4343 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5386 3910 4343 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5386 P49450 19 P49450 P49450 Histone H3-like centromeric protein A CENPA sp|P49450|CENPA_HUMAN Histone H3-like centromeric protein A OS=Homo sapiens GN=CENPA PE=1 SV=1 0.863903 7.96734 0.0110035 76.378 58.872 76.378 2 S RRRSRKPEAPRRRSPSPTPTPGPSRRGPSLG X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPXXXXXX RRS(0.987)PS(0.864)PT(0.149)PTPGPSR RRS(18.22)PS(7.97)PT(-7.97)PT(-36.47)PGPS(-57.06)R 5 3 0.16004 0 4147.3 0 0 3454.6 0 0 3245.8 0 0 2933.7 0 0 4137 0 0 4263.7 0 0 3717.5 0 0 3801.4 0 0 4264 0 0 2254.3 0 0 3921 0 0 3260.4 0 0 3330.3 0 0 3065.4 0 0 4140.2 0 0 4212.8 0 0 3819.2 0 0 3899 0 0 4184.1 0 0 2210.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 14767000 0 14767000 0 NaN 1056 639 19 19 3452 3667 3910 4343 3910 4343 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5386 3910 4343 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5386 3910 4343 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5386 P49454 3119 P49454 P49454 Centromere protein F CENPF sp|P49454|CENPF_HUMAN Centromere protein F OS=Homo sapiens GN=CENPF PE=1 SV=2 0.999771 36.3997 2.42409E-06 153.54 124.18 153.54 1 S ATRTSPRLAAQKLALSPLSLGKENLAESSKP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX LALS(1)PLSLGK LALS(36.4)PLS(-36.4)LGK 4 2 -0.75165 14935 0 0 16107 0 0 14237 0 0 14240 0 0 9783.2 0 0 14666 0 0 8908.9 0 0 15307 0 0 14412 0 0 33099 0 0 14130 0 0 15206 0 0 14320 0 0 14742 0 0 10184 0 0 14752 0 0 9261.2 0 0 16326 0 0 13987 0 0 31521 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14559000 14559000 0 0 NaN 1057 640 3119 3119 2288 2417 2601 2906 2601 2906 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22746 2601 2906 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22746 2601 2906 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22746 P49454 3175 P49454 P49454 Centromere protein F CENPF sp|P49454|CENPF_HUMAN Centromere protein F OS=Homo sapiens GN=CENPF PE=1 SV=2 0.987593 19.0527 0.00501206 87.729 48.344 87.729 1 S EPTTKSVPVNNLPERSPTDSPREGLRVKRGR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPXXXXXXXXX SVPVNNLPERS(0.988)PT(0.012)DSPR S(-39.91)VPVNNLPERS(19.05)PT(-19.05)DS(-46.38)PR 11 3 -1.6334 25292 0 0 21439 0 0 21713 0 0 21716 0 0 19717 0 0 22311 0 0 18516 0 0 21681 0 0 21710 0 0 10103 0 0 23919 0 0 20254 0 0 22043 0 0 22290 0 0 20113 0 0 22348 0 0 18993 0 0 22076 0 0 21286 0 0 10015 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19271000 19271000 0 0 NaN 1058 640 3175 3175 4559 4863 5180 5752 5180 5752 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11155 5180 5752 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11155 5180 5752 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11155 P49454 3150 P49454 P49454 Centromere protein F CENPF sp|P49454|CENPF_HUMAN Centromere protein F OS=Homo sapiens GN=CENPF PE=1 SV=2 0.999933 42.0031 1.27024E-07 153.31 132.11 153.31 1 S TAGGSRSQKVKVAQRSPVDSGTILREPTTKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPX VAQRS(1)PVDSGTILREPTTK VAQRS(42)PVDS(-42)GT(-54.16)ILREPT(-119.6)T(-123.41)K 5 4 1.4217 28075 0 0 33808 0 0 29059 0 0 32320 0 0 22215 0 0 26694 0 0 23970 0 0 27805 0 0 35985 0 0 8925 0 0 26570 0 0 31929 0 0 29123 0 0 33186 0 0 22984 0 0 27039 0 0 24644 0 0 28116 0 0 34996 0 0 9047.4 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 59253000 59253000 0 0 NaN 1059 640 3150 3150 5050;5051 5384;5385 5736;5737 6375;6376 5737 6376 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13129 5737 6376 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13129 5737 6376 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13129 P49585 362 P49585 P49585 Choline-phosphate cytidylyltransferase A PCYT1A sp|P49585|PCY1A_HUMAN Choline-phosphate cytidylyltransferase A OS=Homo sapiens GN=PCYT1A PE=1 SV=2 1 102.331 6.71655E-07 138.71 130.37 138.71 1 S SPANLSRHKAAAYDISEDEED__________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX AAAYDIS(1)EDEED AAAY(-102.33)DIS(102.33)EDEED 7 2 0.51255 27369 0 0 25570 0 0 27019 0 0 24835 0 0 23689 0 0 28093 0 0 23653 0 0 26864 0 0 28324 0 0 28512 0 0 25897 0 0 24151 0 0 27186 0 0 25597 0 0 24240 0 0 28052 0 0 24207 0 0 27853 0 0 27749 0 0 27469 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 18998000 18998000 0 0 NaN 1060 641 362 362 16 17 20 27;28 20 27 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13519 20 27 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13519 20 27 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13519 P49585 329 P49585 P49585 Choline-phosphate cytidylyltransferase A PCYT1A sp|P49585|PCY1A_HUMAN Choline-phosphate cytidylyltransferase A OS=Homo sapiens GN=PCYT1A PE=1 SV=2 0.988303 17.0578 0.0475515 47.062 35.719 47.062 2 S ISPKQSPSSSPTRERSPSPSFRWPFSGKTSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX ERS(0.988)PS(0.606)PS(0.406)FR ERS(17.06)PS(1.78)PS(-1.78)FR 3 2 2.3795 0 10672 0 0 14370 0 0 11640 0 0 13270 0 0 13716 0 0 10314 0 0 13636 0 0 12159 0 0 12196 0 0 3522.6 0 0 10102 0 0 13568 0 0 11691 0 0 13644 0 0 13794 0 0 10500 0 0 13844 0 0 12231 0 0 12094 0 0 3598.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 9835500 0 9835500 0 NaN 1061 641 329 329 1140 1200 1292 1421 1292 1421 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7849 1292 1421 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7849 1292 1421 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7849 P49585 331 P49585 P49585 Choline-phosphate cytidylyltransferase A PCYT1A sp|P49585|PCY1A_HUMAN Choline-phosphate cytidylyltransferase A OS=Homo sapiens GN=PCYT1A PE=1 SV=2 0.605807 1.78157 0.0475515 47.062 35.719 47.062 2 S PKQSPSSSPTRERSPSPSFRWPFSGKTSPPC X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX ERS(0.988)PS(0.606)PS(0.406)FR ERS(17.06)PS(1.78)PS(-1.78)FR 5 2 2.3795 0 10672 0 0 14370 0 0 11640 0 0 13270 0 0 13716 0 0 10314 0 0 13636 0 0 12159 0 0 12196 0 0 3522.6 0 0 10102 0 0 13568 0 0 11691 0 0 13644 0 0 13794 0 0 10500 0 0 13844 0 0 12231 0 0 12094 0 0 3598.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 9835500 0 9835500 0 NaN 1062 641 331 331 1140 1200 1292 1421 1292 1421 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7849 1292 1421 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7849 1292 1421 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7849 P49585 343 P49585 P49585 Choline-phosphate cytidylyltransferase A PCYT1A sp|P49585|PCY1A_HUMAN Choline-phosphate cytidylyltransferase A OS=Homo sapiens GN=PCYT1A PE=1 SV=2 0.398668 0.412864 0.00918084 76.21 47.56 76.21 S RSPSPSFRWPFSGKTSPPCSPANLSRHKAAA X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPXXXXX WPFS(0.363)GKT(0.239)S(0.399)PPCSPANLSR WPFS(-0.41)GKT(-2.23)S(0.41)PPCS(-34.3)PANLS(-37.49)R 8 3 -0.47194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1063 641 343 343 5345 5694 6072 6749 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19578 6072 6749 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19578 6072 6749 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19578 P49589 19 P49589 P49589 Cysteine--tRNA ligase, cytoplasmic CARS sp|P49589|SYCC_HUMAN Cysteine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=CARS PE=1 SV=3 0.999004 30.0113 0.019329 60.329 47.562 60.329 1 S SSGQQGKGRRVQPQWSPPAGTQPCRLHLYNS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPXXXXXX VQPQWS(0.999)PPAGT(0.001)QPCR VQPQWS(30.01)PPAGT(-30.01)QPCR 6 3 1.0491 15305 0 0 14805 0 0 14721 0 0 12590 0 0 12740 0 0 14701 0 0 11666 0 0 13227 0 0 14961 0 0 8342.9 0 0 14480 0 0 13973 0 0 14830 0 0 13096 0 0 13034 0 0 14638 0 0 12017 0 0 13576 0 0 14623 0 0 8162 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18255000 18255000 0 0 NaN 1064 643 19 19 5226 5571 5939 6603 5939 6603 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14339 5939 6603 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14339 5939 6603 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14339 P49674 389 P49674 P49674 Casein kinase I isoform epsilon CSNK1E sp|P49674|KC1E_HUMAN Casein kinase I isoform epsilon OS=Homo sapiens GN=CSNK1E PE=1 SV=1 0.674663 4.48891 2.18829E-10 189.47 168.32 189.47 1 S RKVSMRLHRGAPANVSSSDLTGRQEVSRIPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPXXXXXXXX GAPANVS(0.675)S(0.24)S(0.085)DLTGR GAPANVS(4.49)S(-4.49)S(-8.98)DLT(-58.41)GR 7 2 0.18881 17459 0 0 15244 0 0 16311 0 0 14445 0 0 16066 0 0 16973 0 0 14092 0 0 16310 0 0 16205 0 0 7003.2 0 0 16516 0 0 14396 0 0 16483 0 0 14921 0 0 16292 0 0 16905 0 0 14497 0 0 16596 0 0 15900 0 0 6971.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18037000 18037000 0 0 NaN 1065 645 389 389 1368 1443 1551 1714 1551 1714 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11046 1551 1714 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11046 1551 1714 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11046 P49674 363 P49674 P49674 Casein kinase I isoform epsilon CSNK1E sp|P49674|KC1E_HUMAN Casein kinase I isoform epsilon OS=Homo sapiens GN=CSNK1E PE=1 SV=1 0.993097 21.5797 0.000314158 112.7 88.614 112.7 1 S VASTPASRIQPAGNTSPRAISRVDRERKVSM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX IQPAGNT(0.007)S(0.993)PR IQPAGNT(-21.58)S(21.58)PR 8 2 -0.64747 40124 0 0 42403 0 0 38974 0 0 41149 0 0 31594 0 0 33680 0 0 36445 0 0 44018 0 0 40885 0 0 9684.8 0 0 37963 0 0 40049 0 0 39229 0 0 42207 0 0 32570 0 0 34241 0 0 36987 0 0 44044 0 0 40153 0 0 10138 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 62733000 62733000 0 0 NaN 1066 645 363 363 1924 2032 2193 2453 2193 2453 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8039 2193 2453 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8039 2193 2453 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8039 P49716 191 P49716 P49716 CCAAT/enhancer-binding protein delta CEBPD sp|P49716|CEBPD_HUMAN CCAAT/enhancer-binding protein delta OS=Homo sapiens GN=CEBPD PE=1 SV=2 0.999991 50.2242 0.0267288 60.55 39.49 60.55 1 S PAREKSAGKRGPDRGSPEYRQRRERNNIAVR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX RGPDRGS(1)PEYR RGPDRGS(50.22)PEY(-50.22)R 7 3 0.20333 5953.1 0 0 2144.9 0 0 4995.1 0 0 3099.4 0 0 1654.6 0 0 4563.7 0 0 2346.7 0 0 3204.3 0 0 2557.1 0 0 2112.6 0 0 5629.6 0 0 2031.7 0 0 5045.2 0 0 3147.6 0 0 1886.3 0 0 4496 0 0 2361.3 0 0 3330.5 0 0 2514.2 0 0 2063.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 4580600 4580600 0 0 NaN 1067 646 191 191 3246 3443 3679 4082 3679 4082 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5280 3679 4082 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5280 3679 4082 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5280 P49736 13 P49736 P49736 DNA replication licensing factor MCM2 MCM2 sp|P49736|MCM2_HUMAN DNA replication licensing factor MCM2 OS=Homo sapiens GN=MCM2 PE=1 SV=4 0.971935 15.3967 1.88079E-42 246.34 213.14 143.69 1 S ___MAESSESFTMASSPAQRRRGNDPLTSSP X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Phospho (STY);X XXXXPPPPPPPPPPPPPPPPXXXXXXXXXXX AESSESFTMAS(0.028)S(0.972)PAQR AES(-105.46)S(-96.54)ES(-76.36)FT(-48.93)MAS(-15.4)S(15.4)PAQR 12 2 0.092123 24382 0 0 25519 0 0 28995 0 0 29654 0 0 25281 0 0 29061 0 0 23571 0 0 27213 0 0 31225 0 0 19562 0 0 23089 0 0 24131 0 0 28882 0 0 30186 0 0 25857 0 0 29170 0 0 24285 0 0 27957 0 0 30485 0 0 19050 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 322720000 322720000 0 0 NaN 1068 647 13 13 162 169;170 182;183 206;207 182 206 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9918 183 207 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12999 183 207 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12999 P49736 108 P49736 P49736 DNA replication licensing factor MCM2 MCM2 sp|P49736|MCM2_HUMAN DNA replication licensing factor MCM2 OS=Homo sapiens GN=MCM2 PE=1 SV=4 0.995425 23.3763 1.32549E-25 273.84 260.77 273.84 1 S EGLALDDEDVEELTASQREAAERAMRQRDRE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPXXXXXXXX AIPELDAYEAEGLALDDEDVEELT(0.005)AS(0.995)QR AIPELDAY(-240)EAEGLALDDEDVEELT(-23.38)AS(23.38)QR 26 4 -0.61261 22856 0 0 24590 0 0 20435 0 0 22208 0 0 21774 0 0 25395 0 0 23781 0 0 33768 0 0 25271 0 0 420360 0 0 21618 0 0 23216 0 0 20737 0 0 22999 0 0 22047 0 0 26209 0 0 24100 0 0 46213 0 0 24871 0 0 396600 0 0 7 0 0 7 0 0 7 0 0 7 0 0 7 0 0 7 0 0 6 0 0 7 0 0 7 0 0 7 0 0 1872500000 1872500000 0 0 17.804 1069 647 108 108 254;255 272;273 290;291;292;293;294 321;322;323;324;325;326;327 290 321 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23548 290 321 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23548 290 321 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23548 P49736 139 P49736 P49736 DNA replication licensing factor MCM2 MCM2 sp|P49736|MCM2_HUMAN DNA replication licensing factor MCM2 OS=Homo sapiens GN=MCM2 PE=1 SV=4 1 88.4102 8.34979E-11 193.27 162.68 193.27 1 S AGRGLGRMRRGLLYDSDEEDEERPARKRRQV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPXXXXX GLLYDS(1)DEEDEERPAR GLLY(-88.41)DS(88.41)DEEDEERPAR 6 3 0.22525 12470 0 0 12231 0 0 10895 0 0 11607 0 0 11175 0 0 12387 0 0 13505 0 0 12831 0 0 13088 0 0 16077 0 0 11794 0 0 11550 0 0 11069 0 0 11969 0 0 11357 0 0 12417 0 0 13624 0 0 13338 0 0 12932 0 0 15435 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25849000 25849000 0 0 NaN 1070 647 139 139 1504 1582 1710;1711 1892;1893 1710 1892 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13273 1710 1892 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13273 1710 1892 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13273 P49736 26 P49736 P49736 DNA replication licensing factor MCM2 MCM2 sp|P49736|MCM2_HUMAN DNA replication licensing factor MCM2 OS=Homo sapiens GN=MCM2 PE=1 SV=4 0.705832 6.1657 0.0215965 63.691 37.15 63.691 1 S ASSPAQRRRGNDPLTSSPGRSSRRTDALTSS X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY) XXXXXXXPPPPPPPPPPPPPXXXXXXXXXXX RRGNDPLT(0.124)S(0.706)S(0.171)PGR RRGNDPLT(-7.57)S(6.17)S(-6.17)PGR 9 3 -0.73973 6354.4 0 0 5521.2 0 0 7048.7 0 0 5123.9 0 0 6826.9 0 0 7080.7 0 0 7584.9 0 0 6549.1 0 0 5808.6 0 0 2359.2 0 0 6015.5 0 0 5213.4 0 0 7056.4 0 0 5316.7 0 0 6950.1 0 0 7007.8 0 0 7635.7 0 0 6660.9 0 0 5806.7 0 0 2373 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 44568000 44568000 0 0 NaN 1071 647 26 26 1525;3245;3434 1606;3442;3647 3889 4317 3889 4317 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6174 3889 4317 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6174 3889 4317 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6174 P49736 27 P49736 P49736 DNA replication licensing factor MCM2 MCM2 sp|P49736|MCM2_HUMAN DNA replication licensing factor MCM2 OS=Homo sapiens GN=MCM2 PE=1 SV=4 0.992315 21.1151 6.03287E-11 198.29 156.69 151.3 1 S SSPAQRRRGNDPLTSSPGRSSRRTDALTSSP X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXPPPPPPPPPPPPXXXXXXXXXXXX GNDPLTS(0.008)S(0.992)PGR GNDPLT(-50.57)S(-21.12)S(21.12)PGR 8 2 -0.082603 60643 0 0 47831 0 0 61944 0 0 47015 0 0 68412 0 0 61108 0 0 66388 0 0 59552 0 0 51567 0 0 18606 0 0 57388 0 0 45180 0 0 62375 0 0 48549 0 0 69000 0 0 60638 0 0 67269 0 0 60356 0 0 51510 0 0 18898 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 2207600000 2207600000 0 0 NaN 1072 647 27 27 1525;3245;3434 1606;3442;3647 1735;3678 1927;1928;4081 1735 1927 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9220 3678 4081 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7409 3678 4081 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7409 P49736 41 P49736 P49736 DNA replication licensing factor MCM2 MCM2 sp|P49736|MCM2_HUMAN DNA replication licensing factor MCM2 OS=Homo sapiens GN=MCM2 PE=1 SV=4 0.995137 23.1235 6.00291E-07 153.08 99.828 147.72 1 S SSPGRSSRRTDALTSSPGRDLPPFEDESEGL Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX TDALTS(0.005)S(0.995)PGR T(-96.63)DALT(-48.18)S(-23.12)S(23.12)PGR 7 2 -0.012099 56388 0 0 34604 0 0 51700 0 0 35757 0 0 56123 0 0 53723 0 0 53685 0 0 50348 0 0 37286 0 0 5370 0 0 53340 0 0 32696 0 0 52378 0 0 36933 0 0 56643 0 0 53015 0 0 54314 0 0 50795 0 0 37486 0 0 6221.8 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 824520000 824520000 0 0 NaN 1073 647 41 41 3517;4655 3734;4966 3980;5290 4419;5878 5290 5878 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8649 3980 4419 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6599 3980 4419 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6599 P49750 634 P49750 P49750 YLP motif-containing protein 1 YLPM1 sp|P49750|YLPM1_HUMAN YLP motif-containing protein 1 OS=Homo sapiens GN=YLPM1 PE=1 SV=3 0.999306 32.5594 4.21613E-07 153.75 126.74 153.75 1 S RGPASQFYITPSTSLSPRQSGPQWKGPKPAF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX GPASQFYITPSTS(0.001)LS(0.999)PR GPAS(-118.22)QFY(-111.71)IT(-50.97)PS(-41.82)T(-41.82)S(-32.56)LS(32.56)PR 15 2 0.65586 2622.8 0 0 4466.2 0 0 3340.2 0 0 4146.7 0 0 5447.2 0 0 3244.5 0 0 7041.3 0 0 5773.4 0 0 5050.3 0 0 23633 0 0 2484.5 0 0 4217.3 0 0 3350.9 0 0 4262.7 0 0 5424.1 0 0 3368.6 0 0 7036.4 0 0 6405.3 0 0 5067.5 0 0 22387 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7592200 7592200 0 0 NaN 1074 648 634 634 1539 1621 1750 1943 1750 1943 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18876 1750 1943 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18876 1750 1943 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18876 P49754 249 P49754 P49754 Vacuolar protein sorting-associated protein 41 homolog VPS41 sp|P49754|VPS41_HUMAN Vacuolar protein sorting-associated protein 41 homolog OS=Homo sapiens GN=VPS41 PE=1 SV=3 1 43.3077 0.0385763 43.308 38.951 43.308 1 S WGTSVKVCSVKERHASEMRDLPSRYVEIVSQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX ERHAS(1)EMR ERHAS(43.31)EMR 5 3 -2.4557 2690.4 0 0 3762.1 0 0 2840.9 0 0 3416.6 0 0 3475.6 0 0 2761.9 0 0 3307.4 0 0 2700.7 0 0 2959.4 0 0 3267.7 0 0 2546.3 0 0 3552 0 0 2859.4 0 0 3518.6 0 0 3486.9 0 0 2803 0 0 3365.2 0 0 2809.8 0 0 2934.8 0 0 3139.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 2259200 2259200 0 0 NaN 1075 649 249 249 1118 1177 1267 1393 1267 1393 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4895 1267 1393 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4895 1267 1393 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4895 P49756 677 P49756 P49756 RNA-binding protein 25 RBM25 sp|P49756|RBM25_HUMAN RNA-binding protein 25 OS=Homo sapiens GN=RBM25 PE=1 SV=3 0.99223 21.0621 1.164E-22 265.6 202.39 265.6 1 S HRPKIGLSLKLGASNSPGQPNSVKRKKLPVD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPXXXXXXX LGAS(0.008)NS(0.992)PGQPNSVK LGAS(-21.06)NS(21.06)PGQPNS(-92.45)VK 6 2 -0.40483 33071 0 0 41298 0 0 32247 0 0 38071 0 0 29316 0 0 31293 0 0 31745 0 0 33847 0 0 40952 0 0 4296.9 0 0 31291 0 0 38995 0 0 32487 0 0 39178 0 0 29966 0 0 31709 0 0 32449 0 0 33982 0 0 40017 0 0 4829.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 135310000 135310000 0 0 NaN 1076 650 677 677 2361;2362 2494;2495 2683 2996 2683 2996 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11577 2683 2996 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11577 2683 2996 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11577 P49756 683 P49756 P49756 RNA-binding protein 25 RBM25 sp|P49756|RBM25_HUMAN RNA-binding protein 25 OS=Homo sapiens GN=RBM25 PE=1 SV=3 0.958585 14.87 0.035936 52.72 23.764 52.72 1 S LSLKLGASNSPGQPNSVKRKKLPVDSVFNKF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX LGAS(0.01)NS(0.031)PGQPNS(0.959)VKR LGAS(-19.74)NS(-14.87)PGQPNS(14.87)VKR 12 3 0.05317 15019 0 0 17500 0 0 17247 0 0 14790 0 0 23958 0 0 17093 0 0 26903 0 0 19550 0 0 16927 0 0 5130.2 0 0 14220 0 0 16516 0 0 17326 0 0 15388 0 0 23949 0 0 17071 0 0 26971 0 0 19670 0 0 17125 0 0 5283.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 81154000 81154000 0 0 NaN 1077 650 683 683 2361;2362 2494;2495 2684 2997 2684 2997 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9202 2684 2997 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9202 2684 2997 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9202 P49756 583 P49756 P49756 RNA-binding protein 25 RBM25 sp|P49756|RBM25_HUMAN RNA-binding protein 25 OS=Homo sapiens GN=RBM25 PE=1 SV=3 1 193.639 1.0162E-10 193.64 142.15 193.64 1 S EAERRRQPQIKQEPESEEEEEEKQEKEEKRE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPXXXXX QEPES(1)EEEEEEKQEK QEPES(193.64)EEEEEEKQEK 5 3 -1.2478 16640 0 0 21667 0 0 16407 0 0 21708 0 0 21414 0 0 19243 0 0 20570 0 0 19441 0 0 24130 0 0 4345 0 0 15745 0 0 20468 0 0 16594 0 0 22247 0 0 21427 0 0 19409 0 0 21077 0 0 19624 0 0 23658 0 0 4541.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22107000 22107000 0 0 NaN 1078 650 583 583 3018 3199 3422 3795 3422 3795 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9135 3422 3795 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9135 3422 3795 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9135 P49757 7 P49757 P49757 Protein numb homolog NUMB sp|P49757|NUMB_HUMAN Protein numb homolog OS=Homo sapiens GN=NUMB PE=1 SV=2 1 60.7167 0.0296248 60.717 44.71 60.717 1 S _________MNKLRQSFRRKKDVYVPEASRP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX LRQS(1)FRR LRQS(60.72)FRR 4 3 -0.26943 18747 0 0 15872 0 0 17628 0 0 16741 0 0 15924 0 0 19829 0 0 14473 0 0 18459 0 0 18834 0 0 2251.5 0 0 17736 0 0 14999 0 0 17791 0 0 17186 0 0 16244 0 0 19725 0 0 14921 0 0 18636 0 0 18399 0 0 2547.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15006000 15006000 0 0 NaN 1079 651 7 7 2538 2682 2879 3211 2879 3211 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7240 2879 3211 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7240 2879 3211 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7240 P49757 438 P49757 P49757 Protein numb homolog NUMB sp|P49757|NUMB_HUMAN Protein numb homolog OS=Homo sapiens GN=NUMB PE=1 SV=2 0.959754 13.7743 1.36086E-05 136.96 121.33 136.96 1 S AASPGLFQAGHRRTPSEADRWLEEVSKSVRA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPXXXX RT(0.04)PS(0.96)EADRWLEEVSK RT(-13.77)PS(13.77)EADRWLEEVS(-103.72)K 4 3 1.7246 8393.2 0 0 11417 0 0 9246.2 0 0 10141 0 0 7192.5 0 0 6878.9 0 0 7981.4 0 0 9132.1 0 0 10862 0 0 12622 0 0 7945.3 0 0 10778 0 0 9237.7 0 0 10438 0 0 7434.1 0 0 7092.7 0 0 8165.4 0 0 9453.1 0 0 10596 0 0 12096 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26310000 26310000 0 0 NaN 1080 651 438 438 3525 3742 3988 4428 3988 4428 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18060 3988 4428 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18060 3988 4428 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18060 P49760 50 P49760 P49760 Dual specificity protein kinase CLK2 CLK2 sp|P49760|CLK2_HUMAN Dual specificity protein kinase CLK2 OS=Homo sapiens GN=CLK2 PE=1 SV=1 0.999997 55.0105 0.00864939 81.525 60.97 81.525 1 S WSSSSDRTRRRRREDSYHVRSRSSYDDRSSD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX REDS(1)YHVR REDS(55.01)Y(-55.01)HVR 4 3 0.50418 10045 0 0 8827.4 0 0 11333 0 0 8370.7 0 0 6745.5 0 0 10509 0 0 7217.2 0 0 7329.6 0 0 8430.8 0 0 3570 0 0 9510.3 0 0 8336.3 0 0 11282 0 0 8657 0 0 7124 0 0 10405 0 0 7357 0 0 7582.9 0 0 8267.2 0 0 3531.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7029000 7029000 0 0 NaN 1081 652 50 50 3221 3416 3651 4049 3651 4049 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5683 3651 4049 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5683 3651 4049 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5683 P49761 283 P49761 P49761 Dual specificity protein kinase CLK3 CLK3 sp|P49761|CLK3_HUMAN Dual specificity protein kinase CLK3 OS=Homo sapiens GN=CLK3 PE=1 SV=3 1 126.799 5.41672E-05 126.8 108.43 126.8 1 S SASSRSQQSSKRSSRSVEDDKEGHLVCRIGD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX S(1)VEDDKEGHLVCR S(126.8)VEDDKEGHLVCR 1 3 -0.098272 15392 0 0 16227 0 0 15204 0 0 15242 0 0 20409 0 0 17317 0 0 20099 0 0 17502 0 0 18157 0 0 9141.4 0 0 14564 0 0 15324 0 0 15384 0 0 15743 0 0 20398 0 0 17284 0 0 20421 0 0 17824 0 0 17998 0 0 9012.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23494000 23494000 0 0 NaN 1082 653 283 283 4550 4853 5170 5740 5170 5740 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9760 5170 5740 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9760 5170 5740 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9760 P49761 157 P49761 P49761 Dual specificity protein kinase CLK3 CLK3 sp|P49761|CLK3_HUMAN Dual specificity protein kinase CLK3 OS=Homo sapiens GN=CLK3 PE=1 SV=3 0.999912 40.5763 3.61962E-07 155.08 130.18 155.08 1 S AAGAWETMHHCKRYRSPEPDPYLSYRWKRRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX YRS(1)PEPDPYLSYR Y(-40.58)RS(40.58)PEPDPY(-99.9)LS(-95.47)Y(-117.48)R 3 3 -0.54499 13279 0 0 16031 0 0 13801 0 0 13331 0 0 17731 0 0 13998 0 0 18861 0 0 16101 0 0 17356 0 0 5765.2 0 0 12568 0 0 15128 0 0 13917 0 0 13863 0 0 17776 0 0 14038 0 0 19103 0 0 16243 0 0 17189 0 0 5801.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 50142000 50142000 0 0 NaN 1083 653 157 157 5419 5772 6162 6857 6162 6857 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14150 6162 6857 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14150 6162 6857 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14150 P49790 192 P49790 P49790 Nuclear pore complex protein Nup153 NUP153 sp|P49790|NU153_HUMAN Nuclear pore complex protein Nup153 OS=Homo sapiens GN=NUP153 PE=1 SV=2 0.999969 45.1029 5.49901E-05 131.24 99.712 131.24 1 S DDDNISTTSGFSSRASDKDITVSKNTSLPPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPXXXXXXX AS(1)DKDITVSK AS(45.1)DKDIT(-45.1)VS(-68.84)K 2 3 0.028158 69073 0 0 38191 0 0 68367 0 0 39087 0 0 39403 0 0 70205 0 0 45988 0 0 51032 0 0 37981 0 0 5230.6 0 0 65358 0 0 36083 0 0 68540 0 0 40578 0 0 41782 0 0 68751 0 0 46277 0 0 52089 0 0 37815 0 0 6106.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 90407000 90407000 0 0 NaN 1084 654 192 192 440 469 504 565 504 565 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12147 504 565 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12147 504 565 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12147 P49790 687 P49790 P49790 Nuclear pore complex protein Nup153 NUP153 sp|P49790|NU153_HUMAN Nuclear pore complex protein Nup153 OS=Homo sapiens GN=NUP153 PE=1 SV=2 1 80.6319 0.00686904 80.632 62.715 80.632 1 S KVTDNKCIACQAAKLSPRDTAKQTGIETPNK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX CIACQAAKLS(1)PR CIACQAAKLS(80.63)PR 10 3 0.94489 21248 0 0 21925 0 0 24800 0 0 23060 0 0 15467 0 0 23800 0 0 15334 0 0 20118 0 0 24512 0 0 4426.7 0 0 20119 0 0 20719 0 0 24654 0 0 23620 0 0 16253 0 0 23785 0 0 15867 0 0 20456 0 0 23797 0 0 4633.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 62144000 62144000 0 0 NaN 1085 654 687 687 607 646 688 764 688 764 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12258 688 764 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12258 688 764 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12258 P49790 529 P49790 P49790 Nuclear pore complex protein Nup153 NUP153 sp|P49790|NU153_HUMAN Nuclear pore complex protein Nup153 OS=Homo sapiens GN=NUP153 PE=1 SV=2 0.996076 24.0455 4.7936E-05 143.91 81.336 143.91 1 S MTSPSSTGSPMFKFSSPIVKSTEANVLPPSS Oxidation (M);Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX FS(0.004)S(0.996)PIVK FS(-24.05)S(24.05)PIVK 3 2 0.10239 22962 0 0 36931 0 0 24657 0 0 37432 0 0 16583 0 0 22582 0 0 16315 0 0 26595 0 0 42218 0 0 8105.9 0 0 21734 0 0 34890 0 0 24632 0 0 38165 0 0 17326 0 0 23364 0 0 17329 0 0 26766 0 0 40557 0 0 8248.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 42756000 42756000 0 0 NaN 1086 654 529 529 1329 1402 1509 1671 1509 1671 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16688 1509 1671 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16688 1509 1671 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16688 P49790 633 P49790 P49790 Nuclear pore complex protein Nup153 NUP153 sp|P49790|NU153_HUMAN Nuclear pore complex protein Nup153 OS=Homo sapiens GN=NUP153 PE=1 SV=2 0.694484 5.30504 0.00862216 66.143 48.927 66.143 1 S ASPKIDSVAAQPTATSPVVYTRPAISSFSSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPPPPPPPPP IDSVAAQPT(0.009)AT(0.205)S(0.694)PVVY(0.027)T(0.029)RPAIS(0.007)S(0.007)FS(0.007)S(0.007)S(0.007)GIGFGESLK IDS(-42.39)VAAQPT(-19.1)AT(-5.31)S(5.31)PVVY(-14.17)T(-13.8)RPAIS(-19.79)S(-19.79)FS(-19.79)S(-19.79)S(-19.79)GIGFGES(-35.23)LK 12 4 0.47095 4573.1 0 0 5854.5 0 0 3859.5 0 0 4535.8 0 0 2011.9 0 0 5437.6 0 0 5693.1 0 0 6679.8 0 0 7614.2 0 0 93793 0 0 4324.7 0 0 5523.1 0 0 3911.6 0 0 4752.2 0 0 2204.6 0 0 5602.3 0 0 5670.9 0 0 9478.3 0 0 7431.4 0 0 88472 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 274150000 274150000 0 0 NaN 1087 654 633 633 1800;1801 1900;1901 2048 2284 2048 2284 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23057 2048 2284 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23057 2048 2284 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23057 P49790 334 P49790 P49790 Nuclear pore complex protein Nup153 NUP153 sp|P49790|NU153_HUMAN Nuclear pore complex protein Nup153 OS=Homo sapiens GN=NUP153 PE=1 SV=2 0.923725 10.8326 8.45963E-05 118.08 91.643 118.08 1 S SSPLADAKRIPSIVSSPLNSPLDRSGIDITD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPXXXXXXX RIPSIVS(0.076)S(0.924)PLNSPLDR RIPS(-48.82)IVS(-10.83)S(10.83)PLNS(-52.76)PLDR 8 3 -0.40836 7309.3 0 0 8616 0 0 8034.2 0 0 9727.4 0 0 9214.9 0 0 9326.6 0 0 8793.3 0 0 10903 0 0 10398 0 0 16780 0 0 6919.2 0 0 8145.6 0 0 8062 0 0 9913.5 0 0 9277.2 0 0 9417.7 0 0 9015 0 0 11381 0 0 10192 0 0 16053 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 46712000 46712000 0 0 NaN 1088 654 334 334 1915;3279 2023;3479 2184;3716 2444;4129 3716 4129 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19078 3716 4129 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19078 3716 4129 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19078 P49790 209 P49790 P49790 Nuclear pore complex protein Nup153 NUP153 sp|P49790|NU153_HUMAN Nuclear pore complex protein Nup153 OS=Homo sapiens GN=NUP153 PE=1 SV=2 1 89.7205 8.81272E-16 231.85 203.23 231.85 1 S KDITVSKNTSLPPLWSPEAERSHSLSQHTAT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPXXXXXXXXXX NTSLPPLWS(1)PEAER NT(-101.77)S(-89.72)LPPLWS(89.72)PEAER 9 2 -0.30009 7196 0 0 11452 0 0 9097.9 0 0 10128 0 0 6810 0 0 7785.5 0 0 6499.5 0 0 9185.8 0 0 11481 0 0 25992 0 0 6816.4 0 0 10810 0 0 9023.1 0 0 10442 0 0 7046.2 0 0 7974.8 0 0 6767.3 0 0 9942.9 0 0 11117 0 0 24687 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23442000 23442000 0 0 NaN 1089 654 209 209 2949 3128 3349 3714 3349 3714 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19998 3349 3714 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19998 3349 3714 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19998 P49790 516 P49790 P49790 Nuclear pore complex protein Nup153 NUP153 sp|P49790|NU153_HUMAN Nuclear pore complex protein Nup153 OS=Homo sapiens GN=NUP153 PE=1 SV=2 0.422936 0 0.000742702 100.21 69.381 100.21 S PINSSQALTNKVQMTSPSSTGSPMFKFSSPI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VQMT(0.423)S(0.423)PS(0.154)STGSPMFK VQMT(0)S(0)PS(-4.39)S(-31.06)T(-40.17)GS(-56.25)PMFK 5 3 -0.52751 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1090 654 516 516 5225 5569;5570 5937 6601 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15693 5937 6601 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15693 5937 6601 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15693 P49790 518 P49790 P49790 Nuclear pore complex protein Nup153 NUP153 sp|P49790|NU153_HUMAN Nuclear pore complex protein Nup153 OS=Homo sapiens GN=NUP153 PE=1 SV=2 0.546173 1.82122 0.000983251 99.092 77.251 99.092 1 S NSSQALTNKVQMTSPSSTGSPMFKFSSPIVK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPXXXXXXX VQMT(0.054)S(0.359)PS(0.546)S(0.039)T(0.002)GSPMFK VQMT(-10.08)S(-1.82)PS(1.82)S(-11.42)T(-25.28)GS(-37.99)PMFK 7 3 -0.40144 12763 0 0 14994 0 0 13635 0 0 13079 0 0 6756.1 0 0 12892 0 0 7168.9 0 0 13104 0 0 14772 0 0 7153.1 0 0 12080 0 0 14153 0 0 13596 0 0 13543 0 0 7275.3 0 0 12946 0 0 7485.7 0 0 13351 0 0 14253 0 0 7038.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 67150000 67150000 0 0 NaN 1091 654 518 518 5225 5569;5570 5938 6602 5938 6602 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18020 5938 6602 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18020 5938 6602 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18020 P49792;Q7Z3J3;P0DJD0;P0DJD1;A6NKT7;Q99666;O14715 2510;1535;1519;1527;1535;1534;1534 P49792 P49792 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 RANBP2;RGPD4;RGPD1;RGPD2;RGPD3;RGPD5;RGPD8 sp|P49792|RBP2_HUMAN E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2;sp|Q7Z3J3|RGPD4_HUMAN RanBP2-like and GRIP domain-containing protein 4 OS=Homo sapiens GN=RGPD4 PE=2 SV=3;sp|P0DJD0|RGPD1_HUMAN RANBP2-like and GRIP domain-containing pr 1 72.607 5.77942E-07 140.17 123.1 72.607 1 S VEVSSTSETTPKAVVSPPKFVFGSESVKSIF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPXXX AVVS(1)PPK AVVS(72.61)PPK 4 2 -0.13502 41974 0 0 49287 0 0 41953 0 0 51679 0 0 29603 0 0 41306 0 0 30832 0 0 41041 0 0 56094 0 0 19628 0 0 39718 0 0 46574 0 0 42096 0 0 52750 0 0 30811 0 0 41900 0 0 32017 0 0 41769 0 0 54276 0 0 19432 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 48314000 48314000 0 0 NaN 1092 655 2510 2510 579;580 617;618 658;659 733;734 658 733 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11971 659 734 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21277 659 734 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21277 P49792 1575 P49792 P49792 E3 SUMO-protein ligase RanBP2 RANBP2 sp|P49792|RBP2_HUMAN E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2 0.6907 7.10213 3.37044E-05 125.11 97.21 125.11 1 S ATRCVACQNPDKPSPSTSVPAPASFKFGTSE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPPPXXXXX CVACQNPDKPS(0.075)PS(0.691)T(0.1)S(0.135)VPAPASFK CVACQNPDKPS(-9.66)PS(7.1)T(-8.39)S(-7.1)VPAPAS(-60.44)FK 13 4 0.79481 15855 0 0 26351 0 0 14230 0 0 25218 0 0 19120 0 0 15865 0 0 17443 0 0 20334 0 0 26811 0 0 42149 0 0 14996 0 0 24886 0 0 14479 0 0 25812 0 0 19099 0 0 16455 0 0 18092 0 0 21494 0 0 26057 0 0 40159 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 12778000 12778000 0 0 NaN 1093 655 1575 1575 626 667 711 787;788 711 787 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15879 711 787 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15879 711 787 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15879 P49792;Q7Z3J3;P0DJD0;P0DJD1;A6NKT7;Q99666;O14715 2454;1479;1463;1471;1479;1478;1478 P49792 P49792 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 RANBP2;RGPD4;RGPD1;RGPD2;RGPD3;RGPD5;RGPD8 sp|P49792|RBP2_HUMAN E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2;sp|Q7Z3J3|RGPD4_HUMAN RanBP2-like and GRIP domain-containing protein 4 OS=Homo sapiens GN=RGPD4 PE=2 SV=3;sp|P0DJD0|RGPD1_HUMAN RANBP2-like and GRIP domain-containing pr 0.999907 40.3215 0.0047346 86.699 70.227 86.699 1 S AKTAQEKDSLITPHVSRSSTPRESPCGKIAV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPXXXXXXXXXXXXXX DSLITPHVS(1)R DS(-73.56)LIT(-40.32)PHVS(40.32)R 9 3 -0.23441 5938.4 0 0 5322.9 0 0 6162.1 0 0 5237.1 0 0 4891.4 0 0 6218.3 0 0 4532.3 0 0 5051.2 0 0 6198.1 0 0 1600.1 0 0 5620.1 0 0 5027.9 0 0 6175.8 0 0 5398.3 0 0 5035.3 0 0 6177.5 0 0 4676.4 0 0 5160.2 0 0 6045 0 0 1623.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13654000 13654000 0 0 NaN 1094 655 2454 2454 812 860 916 1009 916 1009 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12452 916 1009 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12452 916 1009 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12452 P49792 955 P49792 P49792 E3 SUMO-protein ligase RanBP2 RANBP2 sp|P49792|RBP2_HUMAN E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2 1 84.4453 6.28373E-08 172.54 121.52 172.54 1 S GPPALRFESPATGILSPRGDDYFNYNVQQTS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX FESPATGILS(1)PR FES(-107.37)PAT(-84.45)GILS(84.45)PR 10 2 0.39068 15793 0 0 33095 0 0 16734 0 0 29423 0 0 25735 0 0 15615 0 0 27014 0 0 25149 0 0 33754 0 0 16010 0 0 14948 0 0 31243 0 0 16908 0 0 30213 0 0 25609 0 0 16418 0 0 27621 0 0 25339 0 0 33019 0 0 15657 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 47515000 47515000 0 0 NaN 1095 655 955 955 1256 1321 1422 1575 1422 1575 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18854 1422 1575 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18854 1422 1575 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18854 P49792 3207 P49792 P49792 E3 SUMO-protein ligase RanBP2 RANBP2 sp|P49792|RBP2_HUMAN E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2 0.999479 32.8252 0.000485842 101.32 50.228 80.916 1 S VKDGMDTVKKIESFGSPKGSVCRRITITECG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX IES(0.001)FGS(0.999)PK IES(-32.83)FGS(32.83)PK 6 2 1.0667 18340 0 0 33213 0 0 15347 0 0 33031 0 0 17434 0 0 16441 0 0 16295 0 0 21873 0 0 36998 0 0 3796.7 0 0 17343 0 0 31374 0 0 15649 0 0 33660 0 0 17572 0 0 17296 0 0 17209 0 0 21844 0 0 35628 0 0 4081.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 47701000 47701000 0 0 NaN 1096 655 3207 3207 1824;2092 1925;2213 2079;2382 2329;2654 2079 2329 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15696 2382 2654 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13938 2382 2654 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13938 P49792 1509 P49792 P49792 E3 SUMO-protein ligase RanBP2 RANBP2 sp|P49792|RBP2_HUMAN E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2 0.891571 9.50538 5.19182E-07 148.52 104.01 148.52 1 S GSSTKCAACQNPRKQSLPATSIPTPASFKFG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX KQS(0.892)LPAT(0.1)S(0.009)IPTPASFK KQS(9.51)LPAT(-9.51)S(-20.2)IPT(-60.59)PAS(-104.23)FK 3 3 -0.31695 14013 0 0 10938 0 0 12371 0 0 9078.3 0 0 33342 0 0 15018 0 0 29682 0 0 20058 0 0 11330 0 0 18150 0 0 13253 0 0 10322 0 0 12801 0 0 9530.3 0 0 32528 0 0 14886 0 0 29887 0 0 20471 0 0 11958 0 0 17554 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 40961000 40961000 0 0 NaN 1097 655 1509 1509 2187 2311 2488 2770 2488 2770 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18893 2488 2770 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18893 2488 2770 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18893 P49792;Q7Z3J3 2276;1301 P49792 P49792 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4 RANBP2;RGPD4 sp|P49792|RBP2_HUMAN E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2;sp|Q7Z3J3|RGPD4_HUMAN RanBP2-like and GRIP domain-containing protein 4 OS=Homo sapiens GN=RGPD4 PE=2 SV=3 0.910719 10.071 0.000158214 109.14 88.312 109.14 2 S GESTTGFNFSFKSALSPSKSPAKLNQSGTSV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX SALS(0.911)PS(0.094)KS(0.995)PAK S(-37.23)ALS(10.07)PS(-10.07)KS(22.6)PAK 4 3 0.05321 0 21469 0 0 44985 0 0 24807 0 0 42433 0 0 14155 0 0 23657 0 0 13839 0 0 27529 0 0 42828 0 0 5941.1 0 0 20328 0 0 42481 0 0 24657 0 0 43423 0 0 15016 0 0 24611 0 0 14896 0 0 27643 0 0 41029 0 0 6231.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 90262000 0 90262000 0 NaN 1098 655 2276 2276 3587 3810;3811 4064 4519 4064 4519 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11289 4064 4519 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11289 4064 4519 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11289 P49792;Q7Z3J3 2280;1305 P49792 P49792 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4 RANBP2;RGPD4 sp|P49792|RBP2_HUMAN E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2;sp|Q7Z3J3|RGPD4_HUMAN RanBP2-like and GRIP domain-containing protein 4 OS=Homo sapiens GN=RGPD4 PE=2 SV=3 0.999547 33.6831 0.000158214 109.14 88.312 101.01 1;2 S TGFNFSFKSALSPSKSPAKLNQSGTSVGTDE X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX SALSPSKS(1)PAK S(-71.1)ALS(-46.11)PS(-33.68)KS(33.68)PAK 8 3 0.0019666 45639 21469 0 52044 44985 0 46631 24807 0 53038 42433 0 35181 14155 0 44233 23657 0 35620 13839 0 43193 27529 0 59438 42828 0 5393.9 5941.1 0 43190 20328 0 49170 42481 0 46759 24657 0 54256 43423 0 36407 15016 0 44727 24611 0 36889 14896 0 43528 27643 0 57637 41029 0 6078.7 6231.4 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 155900000 65640000 90262000 0 NaN 1099 655 2280 2280 3587 3810;3811 4063;4064 4518;4519 4063 4518 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10543 4064 4519 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11289 4064 4519 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11289 P49792 2804 P49792 P49792 E3 SUMO-protein ligase RanBP2 RANBP2 sp|P49792|RBP2_HUMAN E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2 0.523996 5.21189 0.0454264 44.6 27.378 44.6 1 S SFCKSEEPDSITKSISSPSVSSETMDKPVDL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.099)IS(0.524)S(0.158)PS(0.142)VS(0.032)S(0.036)ET(0.009)MDKPVDLSTRK S(-7.26)IS(5.21)S(-5.21)PS(-5.67)VS(-12.21)S(-11.58)ET(-17.76)MDKPVDLS(-31.28)T(-31.28)RK 3 4 0.87498 10766 0 0 15426 0 0 11369 0 0 15909 0 0 9461.5 0 0 14414 0 0 10647 0 0 13659 0 0 19171 0 0 14575 0 0 10189 0 0 14575 0 0 11392 0 0 16281 0 0 9739 0 0 14533 0 0 11014 0 0 14169 0 0 18555 0 0 14040 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29203000 29203000 0 0 NaN 1100 655 2804 2804 3871;3872 4124;4125;4126 4403 4897 4403 4897 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15687 4403 4897 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15687 4403 4897 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15687 P49792 2805 P49792 P49792 E3 SUMO-protein ligase RanBP2 RANBP2 sp|P49792|RBP2_HUMAN E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2 0.95302 13.1161 1.63958E-81 444.3 416.36 444.3 1 S FCKSEEPDSITKSISSPSVSSETMDKPVDLS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP SIS(0.047)S(0.953)PSVSSETMDKPVDLSTR S(-64.17)IS(-13.12)S(13.12)PS(-33.02)VS(-109.59)S(-132.9)ET(-168.12)MDKPVDLS(-292.47)T(-320.98)R 4 3 -0.12504 66050 0 0 162850 0 0 69214 0 0 171160 0 0 62936 0 0 78805 0 0 60613 0 0 117030 0 0 191330 0 0 82746 0 0 62512 0 0 153890 0 0 69431 0 0 173750 0 0 64329 0 0 83747 0 0 65390 0 0 118400 0 0 183240 0 0 80623 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 274250000 274250000 0 0 NaN 1101 655 2805 2805 3871;3872 4124;4125;4126 4400;4401;4402 4894;4895;4896 4402 4896 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16251 4402 4896 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16251 4402 4896 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16251 P49792;Q7Z3J3;P0DJD0;P0DJD1;A6NKT7 796;797;787;795;797 P49792 P49792 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 3 RANBP2;RGPD4;RGPD1;RGPD2;RGPD3 sp|P49792|RBP2_HUMAN E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2;sp|Q7Z3J3|RGPD4_HUMAN RanBP2-like and GRIP domain-containing protein 4 OS=Homo sapiens GN=RGPD4 PE=2 SV=3;sp|P0DJD0|RGPD1_HUMAN RANBP2-like and GRIP domain-containing pr 0.999035 32.4677 0.0183186 60.641 26.771 60.641 1;2 S SPTRYSLSPSKSYKYSPKTPPRWAEDQNSLL X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX SYKY(0.001)S(0.999)PK S(-34.52)Y(-43.32)KY(-32.47)S(32.47)PK 5 3 0.34677 24613 26554 0 26270 45407 0 26548 30293 0 26111 45081 0 17926 19397 0 25968 36213 0 23503 21500 0 26276 34866 0 26474 50958 0 2323.5 28756 0 23297 25141 0 24816 42893 0 26526 30159 0 26817 46165 0 18782 20385 0 26043 36731 0 23737 22591 0 26415 35892 0 25996 49030 0 2796 27884 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 106070000 49994000 56071000 0 NaN 1102 655 796 796 4595;4596;5430 4901;4902;5783 5221;5222 5798;5799 5221 5798 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10686 5221 5798 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10686 5221 5798 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10686 P49792 1400 P49792 P49792 E3 SUMO-protein ligase RanBP2 RANBP2 sp|P49792|RBP2_HUMAN E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2 0.986561 18.6576 4.39022E-10 210.44 108.38 210.44 1 S LVGPPLAETVFTPKTSPENVQDRFALVTPKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXXXXXXXXXPPPPPPPPPXXXXXXXX T(0.013)S(0.987)PENVQDR T(-18.66)S(18.66)PENVQDR 2 2 -0.016243 17618 0 0 25244 0 0 16075 0 0 25699 0 0 19695 0 0 17197 0 0 18615 0 0 22884 0 0 27624 0 0 7945.8 0 0 16665 0 0 23850 0 0 16317 0 0 26222 0 0 19766 0 0 17703 0 0 19247 0 0 22973 0 0 26874 0 0 8011.5 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 15556000 15556000 0 0 NaN 1103 655 1400 1400 4933 5258 5601 6224;6225 5601 6224 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6294 5601 6224 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6294 5601 6224 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6294 P49792 2900 P49792 P49792 E3 SUMO-protein ligase RanBP2 RANBP2 sp|P49792|RBP2_HUMAN E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2 1 230.868 6.47809E-27 286.79 271.97 286.79 1 S VGTQSAGKVGEDEDGSDEEVVHNEDIHFEPI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPPP VGEDEDGS(1)DEEVVHNEDIHFEPIVSLPEVEVK VGEDEDGS(230.87)DEEVVHNEDIHFEPIVS(-230.87)LPEVEVK 8 4 -0.24196 6578.5 0 0 9581.2 0 0 8198.2 0 0 10286 0 0 7449.9 0 0 6164.8 0 0 7137.8 0 0 10576 0 0 8792.7 0 0 126020 0 0 6231 0 0 9055.1 0 0 8152.3 0 0 10452 0 0 7601.5 0 0 6655.9 0 0 7325.9 0 0 14235 0 0 8605.6 0 0 118910 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 43674000 43674000 0 0 NaN 1104 655 2900 2900 5113 5450 5805 6454;6455 5805 6455 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22937 5805 6455 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22937 5805 6455 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22937 P49792 21 P49792 P49792 E3 SUMO-protein ligase RanBP2 RANBP2 sp|P49792|RBP2_HUMAN E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2 0.813405 7.86426 0.00800289 78.486 66.62 78.486 1 S ADVERYIASVQGSTPSPRQKSMKGFYFAKLY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPXXXXXXXXXXXXX YIASVQGS(0.054)T(0.133)PS(0.813)PR Y(-73.94)IAS(-57.39)VQGS(-11.81)T(-7.86)PS(7.86)PR 11 3 0.52026 11625 0 0 9201.5 0 0 10535 0 0 10854 0 0 6988.3 0 0 12595 0 0 6342.2 0 0 10166 0 0 10781 0 0 2326.2 0 0 10996 0 0 8701.8 0 0 10626 0 0 11071 0 0 7296.2 0 0 12521 0 0 6608.4 0 0 10361 0 0 10450 0 0 2425.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13530000 13530000 0 0 NaN 1105 655 21 21 5390 5742 6129 6816 6129 6816 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12694 6129 6816 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12694 6129 6816 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12694 P49792;Q7Z3J3;P0DJD0;P0DJD1;A6NKT7;Q99666;O14715 788;789;779;787;789;788;788 P49792 P49792 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 RANBP2;RGPD4;RGPD1;RGPD2;RGPD3;RGPD5;RGPD8 sp|P49792|RBP2_HUMAN E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2;sp|Q7Z3J3|RGPD4_HUMAN RanBP2-like and GRIP domain-containing protein 4 OS=Homo sapiens GN=RGPD4 PE=2 SV=3;sp|P0DJD0|RGPD1_HUMAN RANBP2-like and GRIP domain-containing pr 0.900758 10.6461 0.00133031 118.21 69.113 118.21 1 S SEIKHSTPSPTRYSLSPSKSYKYSPKTPPRW X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX YS(0.078)LS(0.901)PS(0.022)K Y(-52.97)S(-10.65)LS(10.65)PS(-16.2)K 4 2 -0.095655 24939 0 0 28286 0 0 25512 0 0 27999 0 0 14749 0 0 23677 0 0 17967 0 0 25115 0 0 30376 0 0 5968 0 0 23600 0 0 26720 0 0 25530 0 0 28697 0 0 15660 0 0 23955 0 0 18475 0 0 25316 0 0 29446 0 0 6200.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 134860000 134860000 0 0 NaN 1106 655 788 788 5427 5780 6170 6866 6170 6866 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13156 6170 6866 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13156 6170 6866 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13156 P49795 215 P49795 P49795 Regulator of G-protein signaling 19 RGS19 sp|P49795|RGS19_HUMAN Regulator of G-protein signaling 19 OS=Homo sapiens GN=RGS19 PE=1 SV=1 0.835002 7.19648 0.021774 65.295 46.68 65.295 1 S PTYRALLLQGPSQSSSEA_____________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPXXXXXXXXXXXXX ALLLQGPSQS(0.006)S(0.159)S(0.835)EA ALLLQGPS(-38.51)QS(-21.7)S(-7.2)S(7.2)EA 12 2 -0.1623 7155.1 0 0 6703.8 0 0 6666.8 0 0 6563.8 0 0 6815.9 0 0 6808.6 0 0 8864.8 0 0 8275.1 0 0 7024.5 0 0 33795 0 0 6768.7 0 0 6332 0 0 6746.9 0 0 6752 0 0 6935.3 0 0 6895.7 0 0 8874.8 0 0 9262 0 0 7009.2 0 0 32014 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10215000 10215000 0 0 NaN 1107 656 215 215 297 318 339 379 339 379 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19487 339 379 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19487 339 379 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19487 P49815 1411 P49815 P49815 Tuberin TSC2 sp|P49815|TSC2_HUMAN Tuberin OS=Homo sapiens GN=TSC2 PE=1 SV=2 1 117.484 9.92751E-05 117.48 83.598 117.48 1 S DILGDPGDKADVGRLSPEVKARSQSGTLDGE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX ADVGRLS(1)PEVK ADVGRLS(117.48)PEVK 7 3 -0.029702 15650 0 0 12009 0 0 15047 0 0 13327 0 0 11114 0 0 14408 0 0 11887 0 0 13878 0 0 11854 0 0 2966.1 0 0 14807 0 0 11352 0 0 15140 0 0 13621 0 0 11521 0 0 14392 0 0 12062 0 0 14031 0 0 11697 0 0 3114.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23592000 23592000 0 0 NaN 1108 657 1411 1411 124 130 140 155 140 155 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12944 140 155 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12944 140 155 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12944 P49815 1385 P49815 P49815 Tuberin TSC2 sp|P49815|TSC2_HUMAN Tuberin OS=Homo sapiens GN=TSC2 PE=1 SV=2 0.342722 0 9.53557E-08 154.13 129.57 154.13 S PSVDLSFQPSQPLSKSSSSPELQTLQDILGD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.343)S(0.343)S(0.27)S(0.044)PELQTLQDILGDPGDK S(0)S(0)S(-1.03)S(-8.87)PELQT(-62.4)LQDILGDPGDK 1 3 0.16343 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1109 657 1385 1385 4464 4755 5060 5615 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23785 5060 5615 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23785 5060 5615 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23785 P49815 1386 P49815 P49815 Tuberin TSC2 sp|P49815|TSC2_HUMAN Tuberin OS=Homo sapiens GN=TSC2 PE=1 SV=2 0.342722 0 9.53557E-08 154.13 129.57 154.13 S SVDLSFQPSQPLSKSSSSPELQTLQDILGDP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.343)S(0.343)S(0.27)S(0.044)PELQTLQDILGDPGDK S(0)S(0)S(-1.03)S(-8.87)PELQT(-62.4)LQDILGDPGDK 2 3 0.16343 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1110 657 1386 1386 4464 4755 5060 5615 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23785 5060 5615 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23785 5060 5615 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23785 P49840 21 P49840 P49840 Glycogen synthase kinase-3 alpha GSK3A sp|P49840|GSK3A_HUMAN Glycogen synthase kinase-3 alpha OS=Homo sapiens GN=GSK3A PE=1 SV=2 0.629183 5.30648 4.44092E-18 230.39 206.48 230.39 1 S PSGGGPGGSGRARTSSFAEPGGGGGGGGGGP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP T(0.185)S(0.185)S(0.629)FAEPGGGGGGGGGGPGGSASGPGGTGGGK T(-5.31)S(-5.31)S(5.31)FAEPGGGGGGGGGGPGGS(-161.32)AS(-172.68)GPGGT(-197.39)GGGK 3 3 -0.15349 8177.7 0 0 10635 0 0 8977.9 0 0 10176 0 0 10271 0 0 8817.6 0 0 11025 0 0 10066 0 0 10959 0 0 9701.8 0 0 7741.2 0 0 10044 0 0 9011.5 0 0 10454 0 0 10357 0 0 8932.9 0 0 11184 0 0 10341 0 0 10816 0 0 9368.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16519000 16519000 0 0 NaN 1111 658 21 21 4957 5285 5628 6255 5628 6255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11401 5628 6255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11401 5628 6255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11401 P49915 332 P49915 P49915 GMP synthase [glutamine-hydrolyzing] GMPS sp|P49915|GUAA_HUMAN GMP synthase [glutamine-hydrolyzing] OS=Homo sapiens GN=GMPS PE=1 SV=1 0.742456 5.4866 0.0445243 41.378 18.499 41.378 1 S RTPRKRISKTLNMTTSPEEKRKIIGDTFVKI X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX T(0.009)LNMT(0.039)T(0.21)S(0.742)PEEK T(-19.18)LNMT(-12.83)T(-5.49)S(5.49)PEEK 7 3 0.66237 11382 0 0 14162 0 0 12058 0 0 12860 0 0 11573 0 0 10447 0 0 11983 0 0 12399 0 0 14051 0 0 3480.8 0 0 10773 0 0 13371 0 0 12098 0 0 13245 0 0 11781 0 0 10610 0 0 12234 0 0 12466 0 0 13776 0 0 3564.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13039000 13039000 0 0 NaN 1112 659 332 332 4780 5097;5098 5431 6039 5431 6039 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10307 5431 6039 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10307 5431 6039 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10307 P49916 853 P49916 P49916 DNA ligase 3 LIG3 sp|P49916|DNLI3_HUMAN DNA ligase 3 OS=Homo sapiens GN=LIG3 PE=1 SV=2 0.889564 9.1201 1.49247E-34 291.03 275.26 291.03 1 S FTVVAGDEGSSTTGGSSEENKGPSGSAVSRK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPX ADFTVVAGDEGSSTT(0.001)GGS(0.89)S(0.109)EENKGPSGSAVSR ADFT(-227.3)VVAGDEGS(-81.6)S(-57.92)T(-35.59)T(-28.74)GGS(9.12)S(-9.12)EENKGPS(-41.4)GS(-56.95)AVS(-61.72)R 18 4 0.81378 6076.9 0 0 7108.6 0 0 6305 0 0 6579 0 0 7406.9 0 0 7236.1 0 0 7803.7 0 0 9485 0 0 7228.7 0 0 50617 0 0 5751.2 0 0 6712.2 0 0 6349.9 0 0 6798 0 0 7456.6 0 0 7347.2 0 0 7908.7 0 0 10952 0 0 7157 0 0 47882 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 17182000 17182000 0 0 NaN 1113 660 853 853 104 110 119 132;133 119 132 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14714 119 132 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14714 119 132 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14714 P49916 242 P49916 P49916 DNA ligase 3 LIG3 sp|P49916|DNLI3_HUMAN DNA ligase 3 OS=Homo sapiens GN=LIG3 PE=1 SV=2 0.974279 15.8394 5.35259E-05 110.03 87.656 110.03 1 S SGFSAKPNNSGEAPSSPTPKRSLSSSKCDPR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX KFSGFSAKPNNSGEAPS(0.025)S(0.974)PTPK KFS(-81.63)GFS(-82.64)AKPNNS(-65.44)GEAPS(-15.84)S(15.84)PT(-34.76)PK 18 4 -0.6763 14380 0 0 12674 0 0 16280 0 0 12328 0 0 14936 0 0 18440 0 0 16043 0 0 13604 0 0 14659 0 0 12008 0 0 13615 0 0 11971 0 0 16270 0 0 12777 0 0 15251 0 0 18172 0 0 16239 0 0 14195 0 0 14523 0 0 11622 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22689000 22689000 0 0 NaN 1114 660 242 242 2058 2177 2345 2612 2345 2612 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14471 2345 2612 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14471 2345 2612 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14471 P49916 913 P49916 P49916 DNA ligase 3 LIG3 sp|P49916|DNLI3_HUMAN DNA ligase 3 OS=Homo sapiens GN=LIG3 PE=1 SV=2 0.605604 1.86505 0.000525441 107.12 53.548 107.12 1 S KPSAMKVGEKLATKSSPVKVGEKRKAADETL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX LATKS(0.394)S(0.606)PVK LAT(-34.3)KS(-1.87)S(1.87)PVK 6 2 -0.3806 23566 0 0 19951 0 0 23666 0 0 19683 0 0 29558 0 0 25460 0 0 28850 0 0 24762 0 0 21089 0 0 23381 0 0 22300 0 0 18846 0 0 23895 0 0 20319 0 0 29630 0 0 25297 0 0 29188 0 0 25570 0 0 21138 0 0 22589 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10826000 10826000 0 0 NaN 1115 660 913 913 2301 2430 2619 2927 2619 2927 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11458 2619 2927 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11458 2619 2927 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11458 P49916 210 P49916 P49916 DNA ligase 3 LIG3 sp|P49916|DNLI3_HUMAN DNA ligase 3 OS=Homo sapiens GN=LIG3 PE=1 SV=2 0.999859 38.5028 5.08866E-06 136.14 105.38 119.63 1 S KAVVQAKLTTTGQVTSPVKGASFVTSTNPRK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPPPPPX LTTTGQVTS(1)PVK LT(-89.3)T(-84.69)T(-79.01)GQVT(-38.5)S(38.5)PVK 9 3 0.0030246 40475 0 0 37834 0 0 44009 0 0 35479 0 0 62105 0 0 47700 0 0 67507 0 0 48356 0 0 40009 0 0 29095 0 0 38313 0 0 35727 0 0 44343 0 0 36769 0 0 62006 0 0 47330 0 0 67704 0 0 49356 0 0 40644 0 0 28515 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 302020000 302020000 0 0 NaN 1116 660 210 210 2637;2638 2784;2785 2985;2986 3322;3323 2985 3322 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13875 2986 3323 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16647 2986 3323 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16647 P50395 61 P50395 P50395 Rab GDP dissociation inhibitor beta GDI2 sp|P50395|GDIB_HUMAN Rab GDP dissociation inhibitor beta OS=Homo sapiens GN=GDI2 PE=1 SV=2 0.980105 16.9253 0.0164324 61.524 45.633 61.524 1 S ITPLEDLYKRFKIPGSPPESMGRGRDWNVDL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPXXXXXXXX FKIPGS(0.98)PPES(0.02)MGR FKIPGS(16.93)PPES(-16.93)MGR 6 3 -0.5305 9816.2 0 0 13427 0 0 10972 0 0 13870 0 0 6491.9 0 0 11352 0 0 7558.1 0 0 11347 0 0 15311 0 0 7263 0 0 9293 0 0 12687 0 0 10929 0 0 14173 0 0 6874.9 0 0 11505 0 0 7854.6 0 0 11601 0 0 14778 0 0 7101.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16670000 16670000 0 0 NaN 1117 661 61 61 1286 1355 1457 1616 1457 1616 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17109 1457 1616 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17109 1457 1616 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17109 P50402 49 P50402 P50402 Emerin EMD sp|P50402|EMD_HUMAN Emerin OS=Homo sapiens GN=EMD PE=1 SV=1 0.99997 45.1685 3.89815E-32 305 287.5 305 1 S YEKKIFEYETQRRRLSPPSSSAASSYSFSDL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP RLS(1)PPSSSAASSYSFSDLNSTR RLS(45.17)PPS(-45.17)S(-74.29)S(-96.81)AAS(-163.28)S(-181.28)Y(-242.94)S(-207.94)FS(-219.38)DLNS(-261.8)T(-266.48)R 3 3 0.061871 20416 0 0 33597 0 0 19575 0 0 33154 0 0 18123 0 0 21940 0 0 19499 0 0 28506 0 0 35577 0 0 45159 0 0 19316 0 0 31735 0 0 19744 0 0 33889 0 0 18512 0 0 22659 0 0 20223 0 0 29700 0 0 34422 0 0 43182 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 107200000 107200000 0 0 NaN 1118 662 49 49 3337;3438 3539;3651 3776;3893 4192;4193;4321 3776 4192 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16124 3776 4192 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16124 3776 4192 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16124 P50402 175 P50402 P50402 Emerin EMD sp|P50402|EMD_HUMAN Emerin OS=Homo sapiens GN=EMD PE=1 SV=1 0.499626 0 1.14411E-11 177.99 160.09 177.99 S AYQSITHYRPVSASRSSLDLSYYPTSSSTSF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.5)S(0.5)LDLS(0.001)YYPTSSSTSFMSSSSSSSSWLTR S(0)S(0)LDLS(-28.25)Y(-61.64)Y(-61.05)PT(-77.05)S(-76.5)S(-84.33)S(-92.01)T(-99.54)S(-106.91)FMS(-132.48)S(-137.9)S(-143.11)S(-148.09)S(-152.81)S(-157.26)S(-161.39)S(-165.18)WLT(-173.65)R 1 3 -0.87664 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1119 662 175 175 4362 4646 4950 5495 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21876 4950 5495 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21876 4950 5495 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21876 P50402 176 P50402 P50402 Emerin EMD sp|P50402|EMD_HUMAN Emerin OS=Homo sapiens GN=EMD PE=1 SV=1 0.499626 0 1.14411E-11 177.99 160.09 177.99 S YQSITHYRPVSASRSSLDLSYYPTSSSTSFM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.5)S(0.5)LDLS(0.001)YYPTSSSTSFMSSSSSSSSWLTR S(0)S(0)LDLS(-28.25)Y(-61.64)Y(-61.05)PT(-77.05)S(-76.5)S(-84.33)S(-92.01)T(-99.54)S(-106.91)FMS(-132.48)S(-137.9)S(-143.11)S(-148.09)S(-152.81)S(-157.26)S(-161.39)S(-165.18)WLT(-173.65)R 2 3 -0.87664 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1120 662 176 176 4362 4646 4950 5495 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21876 4950 5495 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21876 4950 5495 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21876 P50479 112 P50479 P50479 PDZ and LIM domain protein 4 PDLIM4 sp|P50479|PDLI4_HUMAN PDZ and LIM domain protein 4 OS=Homo sapiens GN=PDLIM4 PE=1 SV=2 0.983861 19.544 3.90643E-07 152.06 138.1 152.06 1 S AQAHRIHIDPEIQDGSPTTSRRPSGTGTGPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPXXXXXXXXXX IHIDPEIQDGS(0.984)PT(0.011)T(0.004)S(0.001)R IHIDPEIQDGS(19.54)PT(-19.54)T(-24.17)S(-28.34)R 11 3 0.19108 7724.6 0 0 12690 0 0 7439.1 0 0 13100 0 0 6691.6 0 0 7242.2 0 0 6685.8 0 0 9661.6 0 0 14446 0 0 5674.1 0 0 7308.4 0 0 11990 0 0 7498 0 0 13332 0 0 6842 0 0 7561.7 0 0 7018.3 0 0 9768.5 0 0 13924 0 0 5566.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 67394000 67394000 0 0 NaN 1121 663 112 112 1848 1951 2108 2362 2108 2362 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14344 2108 2362 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14344 2108 2362 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14344 P50548 20 P50548 P50548 ETS domain-containing transcription factor ERF ERF sp|P50548|ERF_HUMAN ETS domain-containing transcription factor ERF OS=Homo sapiens GN=ERF PE=1 SV=2 0.588293 1.55561 3.11409E-12 180.06 152.45 180.06 1 S ADTGFAFPDWAYKPESSPGSRQIQLWHFILE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX TPADTGFAFPDWAYKPES(0.588)S(0.411)PGS(0.001)R T(-151.09)PADT(-136.45)GFAFPDWAY(-120.06)KPES(1.56)S(-1.56)PGS(-30.48)R 18 3 -0.070194 7955.5 0 0 6424 0 0 7654.1 0 0 6678.6 0 0 3017.2 0 0 8240 0 0 3124.5 0 0 6834.5 0 0 8062.3 0 0 29735 0 0 7526.8 0 0 6070 0 0 7668 0 0 6866.9 0 0 3341.8 0 0 8228 0 0 3310.6 0 0 7806 0 0 7745.6 0 0 28157 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10601000 10601000 0 0 NaN 1122 664 20 20 4823 5147 5486 6104 5486 6104 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22299 5486 6104 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22299 5486 6104 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22299 P50552 322 P50552 P50552 Vasodilator-stimulated phosphoprotein VASP sp|P50552|VASP_HUMAN Vasodilator-stimulated phosphoprotein OS=Homo sapiens GN=VASP PE=1 SV=3 0.43955 0 1.95498E-19 250.19 231.73 228.72 S RRPWEKNSTTLPRMKSSSSVTTSETQPCTPS X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP MKS(0.44)S(0.44)S(0.119)S(0.002)VTTSETQPCTPSSSDYSDLQR MKS(0)S(0)S(-5.67)S(-24.03)VT(-45.89)T(-58.81)S(-64.15)ET(-100.94)QPCT(-148.36)PS(-154.91)S(-162.27)S(-169.44)DY(-183.45)S(-189.56)DLQR 3 3 0.1146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1123 665 322 322 2712;4471 2877;2878;4762 3087 3434 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12959 5068 5624 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12077 5068 5624 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12077 P50552 323 P50552 P50552 Vasodilator-stimulated phosphoprotein VASP sp|P50552|VASP_HUMAN Vasodilator-stimulated phosphoprotein OS=Homo sapiens GN=VASP PE=1 SV=3 0.43955 0 1.95498E-19 250.19 231.73 228.72 S RPWEKNSTTLPRMKSSSSVTTSETQPCTPSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MKS(0.44)S(0.44)S(0.119)S(0.002)VTTSETQPCTPSSSDYSDLQR MKS(0)S(0)S(-5.67)S(-24.03)VT(-45.89)T(-58.81)S(-64.15)ET(-100.94)QPCT(-148.36)PS(-154.91)S(-162.27)S(-169.44)DY(-183.45)S(-189.56)DLQR 4 3 0.1146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1124 665 323 323 2712;4471 2877;2878;4762 3087 3434 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12959 5068 5624 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12077 5068 5624 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12077 P50616 205 P50616 P50616 Protein Tob1 TOB1 sp|P50616|TOB1_HUMAN Protein Tob1 OS=Homo sapiens GN=TOB1 PE=1 SV=1 0.5 0 1.48594E-08 175.59 143.95 175.59 1 S TKMKNSGRSNKVARTSPINLGLNVNDLLKQK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T(0.5)S(0.5)PINLGLNVNDLLK T(0)S(0)PINLGLNVNDLLK 2 3 0.075999 22220 0 0 21378 0 0 21274 0 0 20583 0 0 9144.7 0 0 23726 0 0 10457 0 0 19175 0 0 23342 0 0 35864 0 0 21022 0 0 20191 0 0 21330 0 0 21233 0 0 10027 0 0 23652 0 0 10934 0 0 20491 0 0 22485 0 0 34214 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 41441000 41441000 0 0 NaN 1125 668 205 205 4937 5262 5605 6229 5605 6229 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23806 5605 6229 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23806 5605 6229 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23806 P50750 347 P50750 P50750 Cyclin-dependent kinase 9 CDK9 sp|P50750|CDK9_HUMAN Cyclin-dependent kinase 9 OS=Homo sapiens GN=CDK9 PE=1 SV=3 0.999996 54.5185 1.26118E-06 139.7 119.8 139.7 1 S LTSMFEYLAPPRRKGSQITQQSTNQSRNPAT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPXXXX RKGS(1)QITQQSTNQSR RKGS(54.52)QIT(-54.52)QQS(-70.08)T(-84.66)NQS(-94.34)R 4 3 -0.46227 19462 0 0 19865 0 0 19709 0 0 18803 0 0 16541 0 0 20530 0 0 17976 0 0 20142 0 0 20888 0 0 4580.8 0 0 18417 0 0 18760 0 0 19796 0 0 19399 0 0 16996 0 0 20505 0 0 18309 0 0 20357 0 0 20487 0 0 4779.5 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 40747000 40747000 0 0 NaN 1126 669 347 347 2078;3291 2198;3492 2367;3729 2637;4142 3729 4142 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5966 3729 4142 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5966 3729 4142 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5966 P50914 139 P50914 P50914 60S ribosomal protein L14 RPL14 sp|P50914|RL14_HUMAN 60S ribosomal protein L14 OS=Homo sapiens GN=RPL14 PE=1 SV=4 1 78.5288 0.0071264 78.529 43.641 78.529 1 S KNEVKKLQKAALLKASPKKAPGTKGTAAAAA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX AALLKAS(1)PK AALLKAS(78.53)PK 7 3 0.28003 62226 0 0 63491 0 0 64385 0 0 60989 0 0 32494 0 0 55108 0 0 37387 0 0 51113 0 0 60306 0 0 2932.8 0 0 58889 0 0 59964 0 0 64327 0 0 62680 0 0 34949 0 0 55456 0 0 38450 0 0 51513 0 0 58532 0 0 3944.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 613530000 613530000 0 0 NaN 1127 670 139 139 44 47 51 62 51 62 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14402 51 62 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14402 51 62 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14402 P51003 24 P51003 P51003 Poly(A) polymerase alpha PAPOLA sp|P51003|PAPOA_HUMAN Poly(A) polymerase alpha OS=Homo sapiens GN=PAPOLA PE=1 SV=4 0.878526 8.59549 8.38056E-05 122.12 99.198 122.12 1 S GSQQTQPPQKHYGITSPISLAAPKETDCVLT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPXXXXXXX HYGIT(0.121)S(0.879)PISLAAPK HY(-66.14)GIT(-8.6)S(8.6)PIS(-40.55)LAAPK 6 3 -0.76211 22928 0 0 26517 0 0 25615 0 0 25214 0 0 17355 0 0 30049 0 0 18278 0 0 23792 0 0 31140 0 0 6674.1 0 0 21705 0 0 25042 0 0 25539 0 0 26046 0 0 18125 0 0 29838 0 0 18913 0 0 24308 0 0 30180 0 0 6835.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 64234000 64234000 0 0 NaN 1128 674 24 24 1763 1862 2009 2239 2009 2239 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17990 2009 2239 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17990 2009 2239 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17990 P51003 653 P51003 P51003 Poly(A) polymerase alpha PAPOLA sp|P51003|PAPOA_HUMAN Poly(A) polymerase alpha OS=Homo sapiens GN=PAPOLA PE=1 SV=4 0.350067 0 0.0327746 51.495 36.947 51.495 S AATKIPTPIVGVKRTSSPHKEESPKKTKTEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPXXXXXX T(0.3)S(0.35)S(0.35)PHKEES(0.999)PK T(-0.66)S(0)S(0)PHKEES(32.66)PK 2 3 -2.0641 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1129 674 653 653 4965;4966 5293;5294;5295 5639 6268 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6859 5639 6268 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6859 5639 6268 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6859 P51003 654 P51003 P51003 Poly(A) polymerase alpha PAPOLA sp|P51003|PAPOA_HUMAN Poly(A) polymerase alpha OS=Homo sapiens GN=PAPOLA PE=1 SV=4 0.978649 17.4193 0.000471685 110.84 87.726 110.84 1 S ATKIPTPIVGVKRTSSPHKEESPKKTKTEED X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX T(0.004)S(0.018)S(0.979)PHKEESPK T(-24.35)S(-17.42)S(17.42)PHKEES(-46.05)PK 3 3 0.76825 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1130 674 654 654 4965;4966 5293;5294;5295 5640 6269 5640 6269 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6601 5640 6269 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6601 5640 6269 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6601 P51003 660 P51003 P51003 Poly(A) polymerase alpha PAPOLA sp|P51003|PAPOA_HUMAN Poly(A) polymerase alpha OS=Homo sapiens GN=PAPOLA PE=1 SV=4 0.999995 51.8389 0.000279706 107.65 81.219 107.65 2 S PIVGVKRTSSPHKEESPKKTKTEEDETSEDA X;X;X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPXXXXXXXXXXXX T(0.442)S(0.176)S(0.382)PHKEES(1)PKK T(0.63)S(-3.99)S(-0.63)PHKEES(51.84)PKK 9 3 0.38734 0 32304 0 0 26937 0 0 33248 0 0 27007 0 0 23268 0 0 39959 0 0 31107 0 0 34155 0 0 28863 0 0 5144.2 0 0 30572 0 0 25447 0 0 33317 0 0 27934 0 0 24311 0 0 39412 0 0 31227 0 0 34639 0 0 28574 0 0 5634.4 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 21543000 0 21543000 0 NaN 1131 674 660 660 4965;4966 5293;5294;5295 5639;5641 6268;6270 5641 6270 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7161 5641 6270 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7161 5641 6270 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7161 P51116 603 P51116 P51116 Fragile X mental retardation syndrome-related protein 2 FXR2 sp|P51116|FXR2_HUMAN Fragile X mental retardation syndrome-related protein 2 OS=Homo sapiens GN=FXR2 PE=1 SV=2 0.81331 6.40989 6.46862E-05 103.53 81.731 103.53 1 S SRRRRNRGNRTDGSISGDRQPVTVADYISRA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPX T(0.001)DGS(0.186)IS(0.813)GDRQPVTVADYISR T(-30.1)DGS(-6.41)IS(6.41)GDRQPVT(-67.05)VADY(-100.73)IS(-92.12)R 6 3 0.022622 13901 0 0 26180 0 0 14880 0 0 25913 0 0 16827 0 0 15512 0 0 16643 0 0 19124 0 0 27138 0 0 16900 0 0 13158 0 0 24730 0 0 14950 0 0 26456 0 0 16969 0 0 16089 0 0 17237 0 0 19552 0 0 26332 0 0 16356 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9707300 9707300 0 0 NaN 1132 675 603 603 4659 4970 5294 5882 5294 5882 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16246 5294 5882 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16246 5294 5882 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16246 P51149 72 P51149 P51149 Ras-related protein Rab-7a RAB7A sp|P51149|RAB7A_HUMAN Ras-related protein Rab-7a OS=Homo sapiens GN=RAB7A PE=1 SV=1 1 92.5892 7.84397E-07 168.76 137.34 168.76 1 S VTMQIWDTAGQERFQSLGVAFYRGADCCVLV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX FQS(1)LGVAFYR FQS(92.59)LGVAFY(-92.59)R 3 2 -0.34933 12239 0 0 3736 0 0 13241 0 0 3714.5 0 0 2898.7 0 0 15489 0 0 3716.4 0 0 7341.7 0 0 4228.5 0 0 19953 0 0 11585 0 0 3529.1 0 0 13150 0 0 4004.4 0 0 3564.3 0 0 14935 0 0 3757.7 0 0 8281.2 0 0 4150.6 0 0 18958 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8450300 8450300 0 0 NaN 1133 676 72 72 1309 1380 1486 1648 1486 1648 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22471 1486 1648 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22471 1486 1648 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22471 P51397 2 P51397 P51397 Death-associated protein 1 DAP sp|P51397|DAP1_HUMAN Death-associated protein 1 OS=Homo sapiens GN=DAP PE=1 SV=3 0.499989 0 0.0194154 55.452 38.127 55.452 1 S ______________MSSPPEGKLETKAGHPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPXXXXX S(0.5)S(0.5)PPEGKLETK S(0)S(0)PPEGKLET(-43.68)K 1 3 0.059649 12207 0 0 15312 0 0 11495 0 0 15727 0 0 15906 0 0 14258 0 0 16739 0 0 15696 0 0 16606 0 0 4453.3 0 0 11548 0 0 14467 0 0 11671 0 0 16099 0 0 15893 0 0 14384 0 0 16996 0 0 15823 0 0 16391 0 0 4556.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17849000 17849000 0 0 NaN 1134 677 2 2 4389;4390 4677;4678 4982 5529 4982 5529 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12468 4982 5529 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12468 4982 5529 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12468 P51397 3 P51397 P51397 Death-associated protein 1 DAP sp|P51397|DAP1_HUMAN Death-associated protein 1 OS=Homo sapiens GN=DAP PE=1 SV=3 0.56955 1.21609 0.0194154 55.452 38.127 48.283 1 S _____________MSSPPEGKLETKAGHPPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPXXXXXXXXXX S(0.43)S(0.57)PPEGK S(-1.22)S(1.22)PPEGK 2 2 -0.034099 20848 0 0 27843 0 0 20853 0 0 26584 0 0 25995 0 0 24338 0 0 26656 0 0 27266 0 0 28769 0 0 7262.2 0 0 19727 0 0 26295 0 0 21062 0 0 27336 0 0 26088 0 0 24546 0 0 27160 0 0 27455 0 0 28297 0 0 7469.3 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 25007000 25007000 0 0 NaN 1135 677 3 3 4389;4390 4677;4678 4981;4982 5528;5529 4981 5528 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7209 4982 5529 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12468 4982 5529 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12468 P51531 329 P51531 P51531 Probable global transcription activator SNF2L2 SMARCA2 sp|P51531|SMCA2_HUMAN Probable global transcription activator SNF2L2 OS=Homo sapiens GN=SMARCA2 PE=1 SV=2 1 203.783 1.72193E-11 203.78 164.55 203.78 1 S QPSPVLQLQQKQSRISPIQKPQGLDPVEILQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP IS(1)PIQKPQGLDPVEILQER IS(203.78)PIQKPQGLDPVEILQER 2 3 -0.46135 15756 0 0 20796 0 0 17468 0 0 19512 0 0 22013 0 0 18449 0 0 23573 0 0 23819 0 0 20762 0 0 60799 0 0 14915 0 0 19638 0 0 17550 0 0 20096 0 0 22090 0 0 18722 0 0 23843 0 0 25516 0 0 20605 0 0 57801 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 49296000 49296000 0 0 NaN 1136 678 329 329 1947 2058 2221 2482 2221 2482 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22901 2221 2482 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22901 2221 2482 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22901 P51532 1382 P51532 P51532 Transcription activator BRG1 SMARCA4 sp|P51532|SMCA4_HUMAN Transcription activator BRG1 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2 0.499902 0 4.1633E-21 252.44 183.1 252.44 1 S FGRGSRHRKEVDYSDSLTEKQWLKAIEEGTL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX EVDYSDS(0.5)LT(0.5)EK EVDY(-128.58)S(-34.05)DS(0)LT(0)EK 7 2 0.0060816 31929 0 0 29325 0 0 32157 0 0 26985 0 0 52235 0 0 30398 0 0 53817 0 0 36305 0 0 28585 0 0 43029 0 0 30214 0 0 27689 0 0 32616 0 0 27905 0 0 51822 0 0 30472 0 0 54014 0 0 37484 0 0 29275 0 0 41357 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 26509000 26509000 0 0 NaN 1137 679 1382 1382 1203 1266 1365 1512;1513 1365 1512 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14228 1365 1512 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14228 1365 1512 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14228 P51608 80 P51608 P51608 Methyl-CpG-binding protein 2 MECP2 sp|P51608|MECP2_HUMAN Methyl-CpG-binding protein 2 OS=Homo sapiens GN=MECP2 PE=1 SV=1 0.994866 22.8734 3.74951E-05 118.54 105.11 118.54 1 S SEGSGSAPAVPEASASPKQRRSIIRDRGPMY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX AETSEGSGSAPAVPEAS(0.005)AS(0.995)PK AET(-98.74)S(-95.74)EGS(-84.56)GS(-71.17)APAVPEAS(-22.87)AS(22.87)PK 19 3 0.003734 11640 0 0 12618 0 0 11812 0 0 13656 0 0 11628 0 0 10984 0 0 12138 0 0 13381 0 0 13409 0 0 9204.3 0 0 11015 0 0 11926 0 0 11883 0 0 13916 0 0 11819 0 0 11177 0 0 12366 0 0 13607 0 0 13177 0 0 8976.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 86768000 86768000 0 0 NaN 1138 680 80 80 169 177 190 214 190 214 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11296 190 214 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11296 190 214 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11296 P51608 229 P51608 P51608 Methyl-CpG-binding protein 2 MECP2 sp|P51608|MECP2_HUMAN Methyl-CpG-binding protein 2 OS=Homo sapiens GN=MECP2 PE=1 SV=1 0.562454 1.09063 0.0243606 54.343 26.138 54.343 1 S EKSPGKLLVKMPFQTSPGGKAEGGGATTSTQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX MPFQT(0.438)S(0.562)PGGK MPFQT(-1.09)S(1.09)PGGK 6 3 -0.33411 3229 0 0 6659.6 0 0 3604.3 0 0 6891.5 0 0 4436.2 0 0 4043.6 0 0 3592.7 0 0 5575 0 0 6829.4 0 0 2338.4 0 0 3056.9 0 0 6292.4 0 0 3616.3 0 0 7016.1 0 0 4443.9 0 0 4203.8 0 0 3786.2 0 0 5603.3 0 0 6601.3 0 0 2330.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7841300 7841300 0 0 NaN 1139 680 229 229 2724 2889 3098 3445 3098 3445 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16732 3098 3445 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16732 3098 3445 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16732 P51610 6 P51610 P51610 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 HCFC1 sp|P51610|HCFC1_HUMAN Host cell factor 1 OS=Homo sapiens GN=HCFC1 PE=1 SV=2 0.988983 19.5313 6.49811E-08 80.975 67.547 80.975 1 S __________MASAVSPANLPAVLLQPRWKR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPXXX AS(0.011)AVS(0.989)PANLPAVLLQPR AS(-19.53)AVS(19.53)PANLPAVLLQPR 5 3 -0.26397 1194.7 0 0 539.32 0 0 1087.9 0 0 1192.9 0 0 1453 0 0 1204.8 0 0 1010.1 0 0 1524.1 0 0 1466.5 0 0 6756 0 0 1130.1 0 0 513.21 0 0 1105.2 0 0 1185.1 0 0 1447.2 0 0 1223.8 0 0 1062 0 0 1719.9 0 0 1427.7 0 0 6396.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 43829000 43829000 0 0 NaN 1140 681 6 6 438 467 502 563 502 563 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24002 502 563 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24002 502 563 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24002 P51610 1507 P51610 P51610 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 HCFC1 sp|P51610|HCFC1_HUMAN Host cell factor 1 OS=Homo sapiens GN=HCFC1 PE=1 SV=2 0.999999 61.1728 1.79513E-08 172.79 169.79 172.79 1 S PVPGPSVPPPEELQVSPGPRQQLPPRQLLQS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX AVTTVTQSTPVPGPSVPPPEELQVS(1)PGPR AVT(-132.9)T(-132.27)VT(-120.01)QS(-105.59)T(-97.94)PVPGPS(-61.17)VPPPEELQVS(61.17)PGPR 25 3 -0.15435 3632 0 0 4641.9 0 0 2758.4 0 0 3811.2 0 0 3431 0 0 3508.8 0 0 3748.8 0 0 4190.5 0 0 5321.2 0 0 19908 0 0 3433.5 0 0 4380.3 0 0 2836.6 0 0 3959.1 0 0 3448 0 0 3576.6 0 0 3843.7 0 0 4776.8 0 0 5183.7 0 0 18842 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 59454000 59454000 0 0 NaN 1141 681 1507 1507 577 615 656 731 656 731 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18558 656 731 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18558 656 731 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18558 P51610 2019 P51610 P51610 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 HCFC1 sp|P51610|HCFC1_HUMAN Host cell factor 1 OS=Homo sapiens GN=HCFC1 PE=1 SV=2 0.5 0 0.00755283 89.189 57.758 89.189 1 S SKDSSGTKPANKRPMSSPEMKSAPKKSKADG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX RPMS(0.5)S(0.5)PEMK RPMS(0)S(0)PEMK 4 2 0.39538 17338 0 0 20415 0 0 16360 0 0 19930 0 0 15297 0 0 16900 0 0 17364 0 0 17707 0 0 19838 0 0 7641.3 0 0 16403 0 0 19283 0 0 16521 0 0 20444 0 0 15618 0 0 17099 0 0 17644 0 0 17960 0 0 19469 0 0 7605 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10684000 10684000 0 0 NaN 1142 681 2019 2019 3394 3606 3846 4271 3846 4271 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9743 3846 4271 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9743 3846 4271 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9743 P51610 2020 P51610 P51610 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 HCFC1 sp|P51610|HCFC1_HUMAN Host cell factor 1 OS=Homo sapiens GN=HCFC1 PE=1 SV=2 0.5 0 0.00755283 89.189 57.758 89.189 1 S KDSSGTKPANKRPMSSPEMKSAPKKSKADGQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RPMS(0.5)S(0.5)PEMK RPMS(0)S(0)PEMK 5 2 0.39538 17338 0 0 20415 0 0 16360 0 0 19930 0 0 15297 0 0 16900 0 0 17364 0 0 17707 0 0 19838 0 0 7641.3 0 0 16403 0 0 19283 0 0 16521 0 0 20444 0 0 15618 0 0 17099 0 0 17644 0 0 17960 0 0 19469 0 0 7605 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10684000 10684000 0 0 NaN 1143 681 2020 2020 3394 3606 3846 4271 3846 4271 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9743 3846 4271 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9743 3846 4271 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9743 P51610 666 P51610 P51610 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 HCFC1 sp|P51610|HCFC1_HUMAN Host cell factor 1 OS=Homo sapiens GN=HCFC1 PE=1 SV=2 0.891957 9.16756 1.21024E-07 165.34 99.074 165.34 1 S TTVVGGVTKTITLVKSPISVPGGSALISNLG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.892)PIS(0.108)VPGGSALISNLGK S(9.17)PIS(-9.17)VPGGS(-55.51)ALIS(-137.13)NLGK 1 3 0.3824 4654.3 0 0 8152.2 0 0 4895.9 0 0 7715.4 0 0 3577.5 0 0 5251.2 0 0 3710.5 0 0 6433.5 0 0 7335.1 0 0 9387.7 0 0 4405.1 0 0 7698.6 0 0 4900.1 0 0 7909 0 0 3713.6 0 0 5406 0 0 3869.8 0 0 6690.3 0 0 7083.8 0 0 8988.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22303000 22303000 0 0 NaN 1144 681 666 666 4124 4397 4688 5204 4688 5204 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22525 4688 5204 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22525 4688 5204 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22525 P51610 598 P51610 P51610 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 HCFC1 sp|P51610|HCFC1_HUMAN Host cell factor 1 OS=Homo sapiens GN=HCFC1 PE=1 SV=2 0.998052 27.0956 1.95258E-31 306.65 271.9 306.65 1 S TPGTTTLPATVKVASSPVMVSNPATRMLKTA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX VAS(0.002)S(0.998)PVMVSNPATR VAS(-27.1)S(27.1)PVMVS(-88.31)NPAT(-140.92)R 4 2 -0.22376 13213 0 0 17928 0 0 13408 0 0 19335 0 0 13644 0 0 15942 0 0 13734 0 0 16263 0 0 17867 0 0 14130 0 0 12504 0 0 16944 0 0 13493 0 0 19713 0 0 13837 0 0 16161 0 0 14088 0 0 16726 0 0 17454 0 0 13681 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 31176000 31176000 0 0 NaN 1145 681 598 598 5058 5392 5744 6383 5744 6383 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12822 5744 6383 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12822 5744 6383 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12822 P51692 128 P51692 P51692 Signal transducer and activator of transcription 5B STAT5B sp|P51692|STA5B_HUMAN Signal transducer and activator of transcription 5B OS=Homo sapiens GN=STAT5B PE=1 SV=2 0.768181 5.20315 6.66672E-08 164.04 140.67 164.04 1 S LYNEQRLVREANNGSSPAGSLADAMSQKHLQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPXXX EANNGS(0.232)S(0.768)PAGSLADAMSQK EANNGS(-5.2)S(5.2)PAGS(-72.45)LADAMS(-132.92)QK 7 3 -0.73732 7794.6 0 0 11518 0 0 7284.2 0 0 12396 0 0 11350 0 0 7086.3 0 0 11068 0 0 9735.6 0 0 11649 0 0 19646 0 0 7373.8 0 0 10886 0 0 7413.3 0 0 12588 0 0 11275 0 0 7410.1 0 0 11296 0 0 10255 0 0 11469 0 0 18724 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 33483000 33483000 0 0 NaN 1146 682 128 128 881 934 1012 1119 1012 1119 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16885 1012 1119 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16885 1012 1119 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16885 P51692 193 P51692 P51692 Signal transducer and activator of transcription 5B STAT5B sp|P51692|STA5B_HUMAN Signal transducer and activator of transcription 5B OS=Homo sapiens GN=STAT5B PE=1 SV=2 1 168.812 1.1764E-07 168.81 148.16 168.81 1 S ESLRIQAQFGPLAQLSPQERLSRETALQQKQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPXXXXXXXXXXX IQAQFGPLAQLS(1)PQER IQAQFGPLAQLS(168.81)PQER 12 3 0.32162 3890.8 0 0 5643.1 0 0 4641.3 0 0 4663.7 0 0 5799.4 0 0 4669.2 0 0 5052.6 0 0 5295.6 0 0 5332.8 0 0 9094.8 0 0 3684.5 0 0 5325.3 0 0 4643.2 0 0 4848.4 0 0 5806.6 0 0 4704.9 0 0 5186.7 0 0 5561.7 0 0 5250 0 0 8686.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10387000 10387000 0 0 NaN 1147 682 193 193 1920 2028 2189 2449 2189 2449 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20674 2189 2449 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20674 2189 2449 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20674 P51825 245 P51825 P51825 AF4/FMR2 family member 1 AFF1 sp|P51825|AFF1_HUMAN AF4/FMR2 family member 1 OS=Homo sapiens GN=AFF1 PE=1 SV=1 0.999956 43.5784 0.00648996 80.69 42.324 80.69 1 S VHGSSNNSKGYCPAKSPKDLAVKVHDKETPQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX GYCPAKS(1)PK GY(-43.58)CPAKS(43.58)PK 7 3 -0.37094 26925 0 0 18358 0 0 30702 0 0 17973 0 0 24662 0 0 28385 0 0 27395 0 0 27106 0 0 21457 0 0 3110.1 0 0 25492 0 0 17340 0 0 30629 0 0 18645 0 0 25417 0 0 27977 0 0 27592 0 0 27333 0 0 21424 0 0 3555.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 31075000 31075000 0 0 NaN 1148 683 245 245 1685 1777 1919 2137 1919 2137 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9707 1919 2137 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9707 1919 2137 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9707 P51825 588 P51825 P51825 AF4/FMR2 family member 1 AFF1 sp|P51825|AFF1_HUMAN AF4/FMR2 family member 1 OS=Homo sapiens GN=AFF1 PE=1 SV=1 0.991893 20.8763 0.00122835 98.391 79.315 98.391 1 S APPEAPHPGKRSCQKSPAQQEPPQRQTVGTK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPXXXXXX S(0.008)CQKS(0.992)PAQQEPPQR S(-20.88)CQKS(20.88)PAQQEPPQR 5 3 -1.0047 9397.8 0 0 5762.9 0 0 10491 0 0 5978.7 0 0 8494 0 0 9413.1 0 0 8892.2 0 0 9425.9 0 0 5960 0 0 2711.2 0 0 8896.8 0 0 5445.2 0 0 10477 0 0 6180.8 0 0 8740.5 0 0 9287.2 0 0 8952 0 0 9536.1 0 0 6005.1 0 0 2771 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13535000 13535000 0 0 NaN 1149 683 588 588 3645 3875 4129 4588 4129 4588 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6071 4129 4588 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6071 4129 4588 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6071 P51858 165 P51858 P51858 Hepatoma-derived growth factor HDGF sp|P51858|HDGF_HUMAN Hepatoma-derived growth factor OS=Homo sapiens GN=HDGF PE=1 SV=1 1 195.268 7.04809E-11 195.27 167.77 195.27 1 S EKGALKRRAGDLLEDSPKRPKEAENPEGEEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPXXXXXXXXXX AGDLLEDS(1)PKRPK AGDLLEDS(195.27)PKRPK 8 4 0.1385 94241 0 0 89975 0 0 103250 0 0 85974 0 0 92391 0 0 92817 0 0 96347 0 0 98441 0 0 96881 0 0 3461.8 0 0 89210 0 0 84974 0 0 103320 0 0 88629 0 0 94456 0 0 92806 0 0 97898 0 0 98630 0 0 95570 0 0 3703.4 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 2 0 0 2144400000 2144400000 0 0 NaN 1150 684 165 165 189;190 197;198 212;213 237;238;239 213 239 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13011 213 239 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13011 213 239 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13011 P51858 103 P51858 P51858 Hepatoma-derived growth factor HDGF sp|P51858|HDGF_HUMAN Hepatoma-derived growth factor OS=Homo sapiens GN=HDGF PE=1 SV=1 0.985547 18.3372 0.000224886 111.83 80.192 111.83 1 S EIENNPTVKASGYQSSQKKSCVEEPEPEPEA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX ASGYQS(0.014)S(0.986)QKK AS(-68.24)GY(-81.5)QS(-18.34)S(18.34)QKK 7 3 -0.22345 43819 0 0 43482 0 0 44888 0 0 41320 0 0 106210 0 0 51689 0 0 121990 0 0 75218 0 0 40392 0 0 3321.6 0 0 41468 0 0 41063 0 0 45919 0 0 42725 0 0 104310 0 0 51649 0 0 121180 0 0 74637 0 0 43316 0 0 4868.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 106200000 106200000 0 0 NaN 1151 684 103 103 462 492 529 593 529 593 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7743 529 593 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7743 529 593 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7743 P51858 132 P51858 P51858 Hepatoma-derived growth factor HDGF sp|P51858|HDGF_HUMAN Hepatoma-derived growth factor OS=Homo sapiens GN=HDGF PE=1 SV=1 0.832219 6.95496 8.47647E-17 217.07 193.5 217.07 1 S EAAEGDGDKKGNAEGSSDEEGKLVIDEPAKE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP GNAEGS(0.832)S(0.168)DEEGKLVIDEPAKEK GNAEGS(6.95)S(-6.95)DEEGKLVIDEPAKEK 6 4 -0.45604 10716 0 0 10508 0 0 10515 0 0 10054 0 0 9373.9 0 0 9823.1 0 0 9106.3 0 0 12489 0 0 11370 0 0 77363 0 0 10139 0 0 9924.3 0 0 10585 0 0 10347 0 0 9578.4 0 0 10036 0 0 9344.3 0 0 14756 0 0 11123 0 0 73136 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28276000 28276000 0 0 NaN 1152 684 132 132 1524 1605 1734 1926 1734 1926 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14760 1734 1926 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14760 1734 1926 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14760 P51991 14 P51991 P51991 Heterogeneous nuclear ribonucleoprotein A3 HNRNPA3 sp|P51991|ROA3_HUMAN Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens GN=HNRNPA3 PE=1 SV=2 1 55.5879 0.0041541 55.588 34.649 55.588 1 S __MEVKPPPGRPQPDSGRRRRRRGEEGHDPK X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPXXXXXXXXXXXXX MEVKPPPGRPQPDS(1)GR MEVKPPPGRPQPDS(55.59)GR 14 3 -0.71238 31951 0 0 41263 0 0 35411 0 0 40761 0 0 31871 0 0 37136 0 0 32122 0 0 38885 0 0 40765 0 0 12156 0 0 30246 0 0 38977 0 0 35415 0 0 41824 0 0 32563 0 0 37430 0 0 32922 0 0 39303 0 0 39857 0 0 12347 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 226330000 226330000 0 0 NaN 1153 686 14 14 2693 2851;2852 3058;3059 3404;3405 3059 3405 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10834 3059 3405 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10834 3059 3405 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10834 P51991 358 P51991 P51991 Heterogeneous nuclear ribonucleoprotein A3 HNRNPA3 sp|P51991|ROA3_HUMAN Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens GN=HNRNPA3 PE=1 SV=2 0.999977 47.0243 6.50746E-54 376.21 358.41 376.21 1 S YGPMKGGSFGGRSSGSPYGGGYGSGGGSGGY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP SSGS(1)PYGGGYGSGGGSGGYGSR S(-54.58)S(-47.02)GS(47.02)PY(-156.95)GGGY(-176.8)GS(-113.83)GGGS(-154.76)GGY(-221.36)GS(-220.05)R 4 2 0.16428 12986 0 0 16499 0 0 16794 0 0 14972 0 0 15022 0 0 19693 0 0 23658 0 0 20724 0 0 19027 0 0 12220 0 0 12302 0 0 15577 0 0 16686 0 0 15542 0 0 15467 0 0 19564 0 0 23540 0 0 21116 0 0 18971 0 0 11986 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 579870000 579870000 0 0 NaN 1154 686 358 358 4355 4641 4944 5488 4944 5488 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9011 4944 5488 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9011 4944 5488 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9011 P51991 366 P51991 P51991 Heterogeneous nuclear ribonucleoprotein A3 HNRNPA3 sp|P51991|ROA3_HUMAN Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens GN=HNRNPA3 PE=1 SV=2 0.999923 43.384 1.47382E-16 215.51 201.04 215.51 1 S FGGRSSGSPYGGGYGSGGGSGGYGSRRF___ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPPPPXXXXX SSGSPYGGGYGS(1)GGGSGGYGSR S(-83.57)S(-71.24)GS(-45.13)PY(-61.57)GGGY(-68.41)GS(43.38)GGGS(-43.38)GGY(-139.77)GS(-111.98)R 12 2 -0.36144 13279 0 0 12995 0 0 14361 0 0 12316 0 0 12134 0 0 18842 0 0 15683 0 0 14581 0 0 13080 0 0 35183 0 0 12569 0 0 12272 0 0 14378 0 0 12792 0 0 12493 0 0 18607 0 0 15722 0 0 15851 0 0 13017 0 0 33466 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 16488000 16488000 0 0 NaN 1155 686 366 366 4355 4641 4945 5489;5490 4945 5490 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9588 4945 5490 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9588 4945 5490 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9588 P52272 637 P52272 P52272 Heterogeneous nuclear ribonucleoprotein M HNRNPM sp|P52272|HNRPM_HUMAN Heterogeneous nuclear ribonucleoprotein M OS=Homo sapiens GN=HNRNPM PE=1 SV=3 0.998916 29.6436 1.32108E-08 169.57 146.67 169.57 1 S AIEMERGNFGGSFAGSFGGAGGHAPGVARKA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPPPPXX GNFGGS(0.001)FAGS(0.999)FGGAGGHAPGVAR GNFGGS(-29.64)FAGS(29.64)FGGAGGHAPGVAR 10 3 -1.4909 7056.9 0 0 6186.9 0 0 8124.2 0 0 6940.1 0 0 7121.3 0 0 7769.8 0 0 8656.4 0 0 8854.3 0 0 6323.9 0 0 13797 0 0 6681.6 0 0 5848.8 0 0 8109.8 0 0 7093.3 0 0 7305.5 0 0 7790.6 0 0 8673.9 0 0 9255.2 0 0 6338.8 0 0 13196 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17490000 17490000 0 0 NaN 1156 688 637 637 1527 1608 1737 1930 1737 1930 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16093 1737 1930 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16093 1737 1930 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16093 P52272 481 P52272 P52272 Heterogeneous nuclear ribonucleoprotein M HNRNPM sp|P52272|HNRPM_HUMAN Heterogeneous nuclear ribonucleoprotein M OS=Homo sapiens GN=HNRNPM PE=1 SV=3 1 98.7299 0.00390679 98.73 33.256 98.73 1 S ASSIERMGQTMERIGSGVERMGAGMGFGLER X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX IGS(1)GVER IGS(98.73)GVER 3 2 0.4299 27523 0 0 36598 0 0 27116 0 0 35718 0 0 50485 0 0 26936 0 0 51612 0 0 36963 0 0 37065 0 0 2659.3 0 0 26042 0 0 34568 0 0 27616 0 0 36587 0 0 49855 0 0 27522 0 0 52084 0 0 36768 0 0 37189 0 0 3359.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 130990000 130990000 0 0 NaN 1157 688 481 481 1843 1946 2102 2356 2102 2356 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9108 2102 2356 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9108 2102 2356 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9108 P52272 575 P52272 P52272 Heterogeneous nuclear ribonucleoprotein M HNRNPM sp|P52272|HNRPM_HUMAN Heterogeneous nuclear ribonucleoprotein M OS=Homo sapiens GN=HNRNPM PE=1 SV=3 1 113.991 0.00105497 113.99 68.83 113.99 1 S ANNLERMGLERMGANSLERMGLERMGANSLE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX MGANS(1)LER MGANS(113.99)LER 5 2 -0.58608 41115 0 0 54959 0 0 39576 0 0 49257 0 0 85973 0 0 37337 0 0 86346 0 0 59547 0 0 54825 0 0 5563.7 0 0 38899 0 0 51886 0 0 40508 0 0 50732 0 0 84481 0 0 38246 0 0 87011 0 0 59037 0 0 55433 0 0 6617 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 164670000 164670000 0 0 NaN 1158 688 575 575 2696 2855 3062 3408 3062 3408 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9502 3062 3408 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9502 3062 3408 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9502 P52272 618 P52272 P52272 Heterogeneous nuclear ribonucleoprotein M HNRNPM sp|P52272|HNRPM_HUMAN Heterogeneous nuclear ribonucleoprotein M OS=Homo sapiens GN=HNRNPM PE=1 SV=3 1 237.101 6.42323E-16 237.1 203.56 237.1 1 S GIERMGLAMGGGGGASFDRAIEMERGNFGGS X;X;X;X;Oxidation (M);X;X;X;Oxidation (M);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX MGLAMGGGGGAS(1)FDR MGLAMGGGGGAS(237.1)FDR 12 2 -1.8486 48620 0 0 53405 0 0 54556 0 0 52561 0 0 47038 0 0 55776 0 0 49144 0 0 51814 0 0 57380 0 0 187200 0 0 46029 0 0 50445 0 0 54505 0 0 54071 0 0 48216 0 0 56066 0 0 50149 0 0 57768 0 0 56268 0 0 177470 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 161410000 161410000 0 0 NaN 1159 688 618 618 2697 2856;2857 3063;3064;3065 3409;3410;3411 3065 3411 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17348 3065 3411 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17348 3065 3411 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17348 P52272 528 P52272 P52272 Heterogeneous nuclear ribonucleoprotein M HNRNPM sp|P52272|HNRPM_HUMAN Heterogeneous nuclear ribonucleoprotein M OS=Homo sapiens GN=HNRNPM PE=1 SV=3 1 48.091 0.0563384 48.091 12.646 48.091 1 S SGVERMGPAIERMGLSMERMVPAGMGAGLER X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX MGLS(1)MER MGLS(48.09)MER 4 2 -1.0115 60686 0 0 52705 0 0 59629 0 0 52596 0 0 37005 0 0 55999 0 0 36337 0 0 51126 0 0 60195 0 0 1730.1 0 0 57421 0 0 49788 0 0 59825 0 0 54066 0 0 38901 0 0 55921 0 0 37673 0 0 51524 0 0 58382 0 0 2812.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 267660000 267660000 0 0 NaN 1160 688 528 528 2698 2858 3066 3412 3066 3412 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13882 3066 3412 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13882 3066 3412 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13882 P52272 468 P52272 P52272 Heterogeneous nuclear ribonucleoprotein M HNRNPM sp|P52272|HNRPM_HUMAN Heterogeneous nuclear ribonucleoprotein M OS=Homo sapiens GN=HNRNPM PE=1 SV=3 0.814145 6.41528 1.0868E-05 136.43 108.32 136.43 1 S GIERMGPLGLDHMASSIERMGQTMERIGSGV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX MGPLGLDHMAS(0.186)S(0.814)IER MGPLGLDHMAS(-6.42)S(6.42)IER 12 3 0.041897 5182.9 0 0 4467.9 0 0 3466 0 0 4182.3 0 0 5171.4 0 0 5429.3 0 0 6043.5 0 0 4287 0 0 5426.6 0 0 4102.3 0 0 4897.9 0 0 4219 0 0 3611.3 0 0 4331.7 0 0 5159 0 0 5379.9 0 0 6093 0 0 4468.1 0 0 5380.5 0 0 3962 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11151000 11151000 0 0 NaN 1161 688 468 468 2700 2860 3068 3414 3068 3414 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18240 3068 3414 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18240 3068 3414 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18240 P52292 62 P52292 P52292 Importin subunit alpha-1 KPNA2 sp|P52292|IMA1_HUMAN Importin subunit alpha-1 OS=Homo sapiens GN=KPNA2 PE=1 SV=1 0.937122 11.733 5.7747E-31 290.92 252.73 290.92 1 S MLKRRNVSSFPDDATSPLQENRNNQGTVNWS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPXXXXXXXXX NVSSFPDDAT(0.063)S(0.937)PLQENR NVS(-118.61)S(-112.9)FPDDAT(-11.73)S(11.73)PLQENR 11 2 0.0086586 4320 0 0 9364 0 0 5025.4 0 0 10794 0 0 4640.9 0 0 5663.6 0 0 5300 0 0 6390.8 0 0 10514 0 0 9624.1 0 0 4090.5 0 0 8854 0 0 5016.2 0 0 10913 0 0 4746.6 0 0 5933.2 0 0 5506.1 0 0 6672.3 0 0 10153 0 0 9210.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 35256000 35256000 0 0 NaN 1162 689 62 62 2961 3140 3362 3727 3362 3727 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14930 3362 3727 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14930 3362 3727 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14930 P52594 181 P52594 P52594 Arf-GAP domain and FG repeat-containing protein 1 AGFG1 sp|P52594|AGFG1_HUMAN Arf-GAP domain and FG repeat-containing protein 1 OS=Homo sapiens GN=AGFG1 PE=1 SV=2 0.998874 29.4827 2.74728E-07 168.76 120.69 168.76 1 S DSAPTLHLNKGTPSQSPVVGRSQGQQQEKKQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX GTPS(0.001)QS(0.999)PVVGR GT(-60.22)PS(-29.48)QS(29.48)PVVGR 6 2 0.66691 67500 0 0 41416 0 0 67331 0 0 43292 0 0 29830 0 0 73390 0 0 36504 0 0 44417 0 0 44018 0 0 2823.7 0 0 63871 0 0 39135 0 0 67361 0 0 44820 0 0 32587 0 0 71862 0 0 37044 0 0 45761 0 0 43114 0 0 3686.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 79133000 79133000 0 0 NaN 1163 693 181 181 1660 1751 1893 2111 1893 2111 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7555 1893 2111 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7555 1893 2111 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7555 P52597 187 P52597 P52597 Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed HNRNPF sp|P52597|HNRPF_HUMAN Heterogeneous nuclear ribonucleoprotein F OS=Homo sapiens GN=HNRNPF PE=1 SV=3 0.837146 7.11001 6.54845E-05 124.29 90.49 124.29 1 S HKERIGHRYIEVFKSSQEEVRSYSDPPLKFM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPXXXXXXXXXX YIEVFKS(0.163)S(0.837)QEEVR Y(-96.95)IEVFKS(-7.11)S(7.11)QEEVR 8 3 0.51701 7662 0 0 7156.7 0 0 7179.2 0 0 9782.1 0 0 11437 0 0 7978.6 0 0 12193 0 0 11732 0 0 9815 0 0 67099 0 0 7248.4 0 0 6775.6 0 0 7310.4 0 0 9854.8 0 0 11363 0 0 8251.2 0 0 12310 0 0 13644 0 0 9785.3 0 0 63454 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30010000 30010000 0 0 NaN 1164 694 187 187 5392 5744 6131 6818 6131 6818 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17860 6131 6818 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17860 6131 6818 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17860 P52701 830 P52701 P52701 DNA mismatch repair protein Msh6 MSH6 sp|P52701|MSH6_HUMAN DNA mismatch repair protein Msh6 OS=Homo sapiens GN=MSH6 PE=1 SV=2 1 91.6203 0.00330773 91.62 46.484 91.62 1 S LPDLERLLSKIHNVGSPLKSQNHPDSRAIMY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX IHNVGS(1)PLK IHNVGS(91.62)PLK 6 3 0.38752 6965.3 0 0 13904 0 0 8545.1 0 0 14261 0 0 8839.1 0 0 8848.9 0 0 9023.6 0 0 11375 0 0 14986 0 0 1336.4 0 0 6596.9 0 0 13137 0 0 8517.5 0 0 14534 0 0 8960.8 0 0 9145.4 0 0 9339.6 0 0 11352 0 0 14534 0 0 1521.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 32534000 32534000 0 0 NaN 1165 695 830 830 1851 1954 2111 2365 2111 2365 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12443 2111 2365 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12443 2111 2365 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12443 P52701 309 P52701 P52701 DNA mismatch repair protein Msh6 MSH6 sp|P52701|MSH6_HUMAN DNA mismatch repair protein Msh6 OS=Homo sapiens GN=MSH6 PE=1 SV=2 0.999998 57.6699 0.000254647 117.95 28.92 108.23 1 S VKVARKRKRMVTGNGSLKRKSSRKETPSATK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX MVTGNGS(1)LKR MVT(-57.67)GNGS(57.67)LKR 7 3 -0.25077 65652 0 0 117970 0 0 68157 0 0 114990 0 0 88337 0 0 62591 0 0 95090 0 0 89319 0 0 126530 0 0 20612 0 0 62133 0 0 111430 0 0 68746 0 0 117410 0 0 88579 0 0 65451 0 0 97330 0 0 89179 0 0 123520 0 0 21476 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 194880000 194880000 0 0 NaN 1166 695 309 309 2763;2764 2932;2933 3142;3143 3491;3492 3143 3492 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10626 3142 3491 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13452 3143 3492 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10626 P52701 65 P52701 P52701 DNA mismatch repair protein Msh6 MSH6 sp|P52701|MSH6_HUMAN DNA mismatch repair protein Msh6 OS=Homo sapiens GN=MSH6 PE=1 SV=2 0.987608 19.0143 0.0252991 54.094 34.307 54.094 1 S WSEAGPGPRPLARSASPPKAKNLNGGLRRSV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX S(0.012)AS(0.988)PPKAK S(-19.01)AS(19.01)PPKAK 3 3 -0.019864 59352 0 0 102050 0 0 60771 0 0 102870 0 0 110410 0 0 59859 0 0 113870 0 0 104850 0 0 120560 0 0 4311.8 0 0 56168 0 0 96407 0 0 61726 0 0 104880 0 0 109170 0 0 62492 0 0 115930 0 0 103560 0 0 118680 0 0 6486.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 105130000 105130000 0 0 NaN 1167 695 65 65 3614 3842 4095 4552 4095 4552 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7910 4095 4552 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7910 4095 4552 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7910 P52701 137 P52701 P52701 DNA mismatch repair protein Msh6 MSH6 sp|P52701|MSH6_HUMAN DNA mismatch repair protein Msh6 OS=Homo sapiens GN=MSH6 PE=1 SV=2 0.991083 20.459 2.53602E-07 152.48 141.87 152.48 1 S EKGKSVRVHVQFFDDSPTRGWVSKRLLKPYT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPXXXXXXXXXXXX VHVQFFDDS(0.991)PT(0.009)R VHVQFFDDS(20.46)PT(-20.46)R 9 3 -0.65354 10302 0 0 12779 0 0 9963.4 0 0 14402 0 0 10142 0 0 8464.1 0 0 10793 0 0 12363 0 0 12752 0 0 38835 0 0 9747.1 0 0 12081 0 0 10055 0 0 14593 0 0 10293 0 0 8871.1 0 0 11008 0 0 13420 0 0 12499 0 0 36854 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 56270000 56270000 0 0 NaN 1168 695 137 137 5134 5471 5827;5828 6478;6479 5827 6478 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17352 5827 6478 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17352 5827 6478 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17352 P52948 1023 P52948 P52948 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 NUP98 sp|P52948|NUP98_HUMAN Nuclear pore complex protein Nup98-Nup96 OS=Homo sapiens GN=NUP98 PE=1 SV=4 0.832391 6.96809 0.0166703 70.225 56.106 70.225 1 S ALDQRFSRLPSKADTSQEICSPRLPISASHS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX ADT(0.167)S(0.832)QEICSPR ADT(-6.97)S(6.97)QEICS(-34.43)PR 4 2 1.0924 25796 0 0 30598 0 0 25773 0 0 29429 0 0 19778 0 0 26377 0 0 22851 0 0 26789 0 0 32916 0 0 8082.2 0 0 24410 0 0 28898 0 0 25885 0 0 30239 0 0 20477 0 0 26596 0 0 23389 0 0 27099 0 0 32052 0 0 8230.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20706000 20706000 0 0 NaN 1169 699 1023 1023 123 129 139 154 139 154 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8527 139 154 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8527 139 154 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8527 P52948 1028 P52948 P52948 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 NUP98 sp|P52948|NUP98_HUMAN Nuclear pore complex protein Nup98-Nup96 OS=Homo sapiens GN=NUP98 PE=1 SV=4 1 72.6408 7.51448E-05 129.29 105.46 129.29 1 S FSRLPSKADTSQEICSPRLPISASHSSKTRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX ADTSQEICS(1)PR ADT(-75.22)S(-72.64)QEICS(72.64)PR 9 2 -1.5246 12903 0 0 17720 0 0 14291 0 0 16082 0 0 16234 0 0 13999 0 0 14634 0 0 14996 0 0 18387 0 0 4061.1 0 0 12215 0 0 16730 0 0 14331 0 0 16579 0 0 16341 0 0 14145 0 0 15076 0 0 15125 0 0 17983 0 0 4171.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30540000 30540000 0 0 NaN 1170 699 1028 1028 123 129 138 153 138 153 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7781 138 153 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7781 138 153 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7781 P52948 839 P52948 P52948 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 NUP98 sp|P52948|NUP98_HUMAN Nuclear pore complex protein Nup98-Nup96 OS=Homo sapiens GN=NUP98 PE=1 SV=4 1 55.4522 0.036087 55.452 24.021 55.452 1 S DGVWPTDKTSRCLIKSPDRLADINYEGRLEA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX CLIKS(1)PDR CLIKS(55.45)PDR 5 2 0.47741 21819 0 0 27744 0 0 22306 0 0 31298 0 0 20041 0 0 23285 0 0 17935 0 0 23822 0 0 29225 0 0 13147 0 0 20648 0 0 26229 0 0 22401 0 0 31790 0 0 20452 0 0 23729 0 0 18666 0 0 24271 0 0 28358 0 0 12931 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13007000 13007000 0 0 NaN 1171 699 839 839 611 650 692 768 692 768 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11375 692 768 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11375 692 768 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11375 P52948 623 P52948 P52948 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 NUP98 sp|P52948|NUP98_HUMAN Nuclear pore complex protein Nup98-Nup96 OS=Homo sapiens GN=NUP98 PE=1 SV=4 0.999069 30.3205 2.85777E-05 128.01 110.75 128.01 1 S SNLFSPVNRDSENLASPSEYPENGERFSFLS Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPXXXXX DSENLAS(0.999)PS(0.001)EYPENGER DS(-54.61)ENLAS(30.32)PS(-30.32)EY(-92.83)PENGER 7 3 -0.95704 8847.8 0 0 9928.7 0 0 10931 0 0 10545 0 0 8156 0 0 10081 0 0 9233.7 0 0 11361 0 0 10526 0 0 6241.9 0 0 8380.1 0 0 9382.8 0 0 10855 0 0 10782 0 0 8457.1 0 0 10153 0 0 9382.8 0 0 11534 0 0 10332 0 0 6140.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14297000 14297000 0 0 NaN 1172 699 623 623 802 850 906 998 906 998 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11400 906 998 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11400 906 998 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11400 P52948 1060 P52948 P52948 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 NUP98 sp|P52948|NUP98_HUMAN Nuclear pore complex protein Nup98-Nup96 OS=Homo sapiens GN=NUP98 PE=1 SV=4 0.998692 29.8497 5.92264E-05 116.39 98.025 116.39 1 S VGGLLQSKFTSGAFLSPSVSVQECRTPRAAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPXXXXXX FTSGAFLS(0.999)PS(0.001)VSVQECR FT(-38.3)S(-39)GAFLS(29.85)PS(-29.85)VS(-61.72)VQECR 8 3 0.29198 6037.5 0 0 6870.3 0 0 5674.9 0 0 6257.9 0 0 6691.8 0 0 5208.8 0 0 6752.8 0 0 5872.2 0 0 7020.6 0 0 8593.4 0 0 5711.7 0 0 6486.7 0 0 5747.7 0 0 6446 0 0 6731.9 0 0 5292.4 0 0 6878.2 0 0 6123.5 0 0 6915.9 0 0 8227.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12433000 12433000 0 0 NaN 1173 699 1060 1060 1338 1411 1518 1681 1518 1681 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20004 1518 1681 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20004 1518 1681 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20004 P52948 608 P52948 P52948 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 NUP98 sp|P52948|NUP98_HUMAN Nuclear pore complex protein Nup98-Nup96 OS=Homo sapiens GN=NUP98 PE=1 SV=4 0.993017 21.5294 8.57246E-07 146.67 110.94 146.67 1 S PKKSIKKLVLKNLNNSNLFSPVNRDSENLAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY) XXXXXXXXXXXPPPPPPPPPPPPPXXXXXXX NLNNS(0.993)NLFS(0.007)PVNR NLNNS(21.53)NLFS(-21.53)PVNR 5 2 -3.2032 16889 0 0 21412 0 0 20252 0 0 20810 0 0 16050 0 0 17557 0 0 17531 0 0 22059 0 0 24479 0 0 55965 0 0 15994 0 0 20223 0 0 20150 0 0 21351 0 0 16563 0 0 17905 0 0 17965 0 0 23639 0 0 23859 0 0 53208 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 10286000 10286000 0 0 NaN 1174 699 608 608 2853 3023 3238 3593;3594 3238 3594 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17292 3238 3594 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17292 3238 3594 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17292 P52948 612 P52948 P52948 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 NUP98 sp|P52948|NUP98_HUMAN Nuclear pore complex protein Nup98-Nup96 OS=Homo sapiens GN=NUP98 PE=1 SV=4 1 103.519 9.42599E-23 268.44 198.89 268.44 1 S IKKLVLKNLNNSNLFSPVNRDSENLASPSEY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXPPPPPPPPPPPPPXXXXXXXXXXX NLNNSNLFS(1)PVNR NLNNS(-103.52)NLFS(103.52)PVNR 9 2 0.19024 23865 0 0 27897 0 0 20992 0 0 27040 0 0 15573 0 0 22926 0 0 17100 0 0 23181 0 0 28131 0 0 45524 0 0 22572 0 0 26349 0 0 21239 0 0 27750 0 0 16155 0 0 23252 0 0 17635 0 0 24614 0 0 27289 0 0 43403 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 53329000 53329000 0 0 NaN 1175 699 612 612 2853 3023 3237 3592 3237 3592 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17025 3237 3592 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17025 3237 3592 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17025 P53355 696 P53355 P53355 Death-associated protein kinase 1 DAPK1 sp|P53355|DAPK1_HUMAN Death-associated protein kinase 1 OS=Homo sapiens GN=DAPK1 PE=1 SV=6 0.566329 1.15909 0.00647607 80.979 57.23 80.979 1 S TQNLQPRIKLKLFGHSGSGKTTLVESLKCGL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX LFGHS(0.566)GS(0.434)GK LFGHS(1.16)GS(-1.16)GK 5 3 0.053856 16655 0 0 17969 0 0 16807 0 0 20158 0 0 13133 0 0 17934 0 0 15217 0 0 18754 0 0 18759 0 0 1825.6 0 0 15760 0 0 16987 0 0 16874 0 0 20528 0 0 13577 0 0 18090 0 0 15486 0 0 18835 0 0 18359 0 0 2153.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23052000 23052000 0 0 NaN 1176 700 696 696 2349 2482 2671 2983 2671 2983 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12062 2671 2983 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12062 2671 2983 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12062 P53367 79 P53367 P53367 Arfaptin-1 ARFIP1 sp|P53367|ARFP1_HUMAN Arfaptin-1 OS=Homo sapiens GN=ARFIP1 PE=1 SV=2 0.538392 2.23497 0.010385 74.605 64.089 74.605 1 S GAFQGSPAPPLPSVMSPSRVAASRLAQQGSD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX EGVIEAGAFQGSPAPPLPS(0.322)VMS(0.538)PS(0.14)R EGVIEAGAFQGS(-33.11)PAPPLPS(-2.23)VMS(2.23)PS(-5.86)R 22 3 -0.68773 3134.9 0 0 4021.9 0 0 3888.5 0 0 4057.6 0 0 2696.2 0 0 3300.3 0 0 3489.3 0 0 5226 0 0 4536.1 0 0 35810 0 0 2969.2 0 0 3799.5 0 0 3859.1 0 0 4151.9 0 0 2818.7 0 0 3433.5 0 0 3542.4 0 0 6246.5 0 0 4431.4 0 0 33841 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13686000 13686000 0 0 NaN 1177 701 79 79 986 1041 1127 1244 1127 1244 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21792 1127 1244 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21792 1127 1244 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21792 P53367 132 P53367 P53367 Arfaptin-1 ARFIP1 sp|P53367|ARFP1_HUMAN Arfaptin-1 OS=Homo sapiens GN=ARFIP1 PE=1 SV=2 0.999949 42.9561 0.00849887 82.261 50.839 82.261 1 S IKNPAMEKLELVRKWSLNTYKCTRQIISEKL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX WS(1)LNTYK WS(42.96)LNT(-42.96)Y(-63.53)K 2 2 0.37117 34296 0 0 20601 0 0 33720 0 0 21134 0 0 33103 0 0 35446 0 0 35212 0 0 31529 0 0 22642 0 0 24386 0 0 32450 0 0 19464 0 0 33983 0 0 21897 0 0 33648 0 0 34887 0 0 35397 0 0 32512 0 0 22874 0 0 23692 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 65145000 65145000 0 0 NaN 1178 701 132 132 2277;5349 2406;5698 2589;6076 2894;6753 6076 6753 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18935 6076 6753 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18935 2589 2894 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17261 P53396 481 P53396 P53396 ATP-citrate synthase ACLY sp|P53396|ACLY_HUMAN ATP-citrate synthase OS=Homo sapiens GN=ACLY PE=1 SV=3 0.999942 42.3323 6.84671E-07 146.78 119.29 146.78 1 S PAKKAKPAMPQDSVPSPRSLQGKSTTLFSRH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPXXXXXXXXXXXXX AKPAMPQDSVPS(1)PR AKPAMPQDS(-42.33)VPS(42.33)PR 12 3 -0.53081 21330 0 0 22541 0 0 19295 0 0 22432 0 0 26224 0 0 20706 0 0 30139 0 0 26367 0 0 20983 0 0 6366.4 0 0 20176 0 0 21293 0 0 19638 0 0 23011 0 0 26250 0 0 20914 0 0 30240 0 0 26421 0 0 21092 0 0 6605 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 292290000 292290000 0 0 NaN 1179 702 481 481 269 290 311 346 311 346 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11579 311 346 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11579 311 346 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11579 P53396 455 P53396 P53396 ATP-citrate synthase ACLY sp|P53396|ACLY_HUMAN ATP-citrate synthase OS=Homo sapiens GN=ACLY PE=1 SV=3 0.999964 44.4945 8.12949E-20 263.43 149.48 263.43 1 S NASGSTSTPAPSRTASFSESRADEVAPAKKA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX TAS(1)FSESR T(-60.46)AS(44.49)FS(-44.49)ES(-109.39)R 3 2 -0.30063 171220 0 0 104540 0 0 166520 0 0 101820 0 0 234460 0 0 163980 0 0 234180 0 0 179150 0 0 107240 0 0 34978 0 0 162000 0 0 98742 0 0 168780 0 0 105710 0 0 233790 0 0 161850 0 0 234920 0 0 180170 0 0 111200 0 0 37082 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 511950000 511950000 0 0 NaN 1180 702 455 455 4628;4629;4630 4937;4938;4939 5259;5260;5261 5841;5842;5843;5844 5259 5841 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8233 5259 5841 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8233 5259 5841 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8233 P53602 96 P53602 P53602 Diphosphomevalonate decarboxylase MVD sp|P53602|MVD1_HUMAN Diphosphomevalonate decarboxylase OS=Homo sapiens GN=MVD PE=1 SV=1 1 74.8208 1.2719E-10 188.68 158.53 188.68 1 S ACLREIRCLARKRRNSRDGDPLPSSLSCKVH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX NS(1)RDGDPLPSSLSCK NS(74.82)RDGDPLPS(-74.82)S(-97.26)LS(-147.15)CK 2 3 -0.58069 21767 0 0 29238 0 0 20898 0 0 30743 0 0 30271 0 0 19618 0 0 29452 0 0 27309 0 0 33022 0 0 13695 0 0 20594 0 0 27629 0 0 21207 0 0 31295 0 0 30157 0 0 20283 0 0 30116 0 0 27507 0 0 32432 0 0 13527 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 43528000 43528000 0 0 NaN 1181 703 96 96 2934;3367 3112;3574 3332;3813 3694;4233 3332 3694 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14019 3332 3694 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14019 3332 3694 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14019 P53621 173 P53621 P53621 Coatomer subunit alpha;Xenin;Proxenin COPA sp|P53621|COPA_HUMAN Coatomer subunit alpha OS=Homo sapiens GN=COPA PE=1 SV=2 0.999987 48.9888 8.26694E-08 171.44 123.57 171.44 1 S TVRVWDISGLRKKNLSPGAVESDVRGITGVD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX NLS(1)PGAVESDVR NLS(48.99)PGAVES(-48.99)DVR 3 2 0.42006 16859 0 0 19028 0 0 16601 0 0 18401 0 0 19253 0 0 17471 0 0 22490 0 0 17713 0 0 19656 0 0 18599 0 0 15952 0 0 17971 0 0 16769 0 0 18917 0 0 19425 0 0 17592 0 0 22660 0 0 18318 0 0 19514 0 0 17923 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 54585000 54585000 0 0 NaN 1182 704 173 173 2866 3037 3252 3608 3252 3608 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15042 3252 3608 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15042 3252 3608 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15042 P53985 483 P53985 P53985 Monocarboxylate transporter 1 SLC16A1 sp|P53985|MOT1_HUMAN Monocarboxylate transporter 1 OS=Homo sapiens GN=SLC16A1 PE=1 SV=3 1 90.1036 0.00776433 90.104 53.41 90.104 1 S IDVAGKPNEVTKAAESPDQKDTDGGPKEEES X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX AAES(1)PDQK AAES(90.1)PDQK 4 2 3.3888 17930 0 0 19799 0 0 17761 0 0 20646 0 0 13736 0 0 17976 0 0 14107 0 0 17622 0 0 25222 0 0 5168.8 0 0 16966 0 0 18708 0 0 17845 0 0 21104 0 0 14192 0 0 18142 0 0 14646 0 0 17845 0 0 24416 0 0 5274.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10715000 10715000 0 0 NaN 1183 705 483 483 28 30 33 43 33 43 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7016 33 43 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7016 33 43 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7016 P53985 213 P53985 P53985 Monocarboxylate transporter 1 SLC16A1 sp|P53985|MOT1_HUMAN Monocarboxylate transporter 1 OS=Homo sapiens GN=SLC16A1 PE=1 SV=3 0.99985 38.228 0.00824356 81.525 35.927 81.525 1 S IGPKPTKAGKDKSKASLEKAGKSGVKKDLHD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX SKAS(1)LEK S(-38.23)KAS(38.23)LEK 4 3 -0.22342 88087 0 0 107100 0 0 83314 0 0 103610 0 0 110890 0 0 94498 0 0 120030 0 0 104160 0 0 124050 0 0 4923.1 0 0 83335 0 0 101150 0 0 84521 0 0 106450 0 0 111040 0 0 95257 0 0 121850 0 0 104260 0 0 122230 0 0 7046.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 113350000 113350000 0 0 NaN 1184 705 213 213 3876 4130 4407 4901 4407 4901 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10261 4407 4901 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10261 4407 4901 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10261 P53999 55 P53999 P53999 Activated RNA polymerase II transcriptional coactivator p15 SUB1 sp|P53999|TCP4_HUMAN Activated RNA polymerase II transcriptional coactivator p15 OS=Homo sapiens GN=SUB1 PE=1 SV=3 0.693306 4.67277 0.00545236 86.557 56.405 86.557 1 S QKTGETSRALSSSKQSSSSRDDNMFQIGKMR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPXX QS(0.693)S(0.236)S(0.025)S(0.045)RDDNMFQIGK QS(4.67)S(-4.67)S(-14.41)S(-11.86)RDDNMFQIGK 2 3 -1.6515 12514 0 0 8130.4 0 0 13115 0 0 8268.2 0 0 9779.5 0 0 13755 0 0 9583.4 0 0 10323 0 0 8462.7 0 0 10760 0 0 11844 0 0 7681.3 0 0 13130 0 0 8569.3 0 0 10117 0 0 13519 0 0 9733.8 0 0 10811 0 0 8397.6 0 0 10371 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 45922000 45922000 0 0 NaN 1185 706 55 55 3150 3341;3342 3573 3963 3573 3963 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15802 3573 3963 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15802 3573 3963 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15802 P53999 56 P53999 P53999 Activated RNA polymerase II transcriptional coactivator p15 SUB1 sp|P53999|TCP4_HUMAN Activated RNA polymerase II transcriptional coactivator p15 OS=Homo sapiens GN=SUB1 PE=1 SV=3 0.499868 1.28875 0.0513332 54.008 36.727 54.008 S KTGETSRALSSSKQSSSSRDDNMFQIGKMRY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX QS(0.372)S(0.5)S(0.055)S(0.074)RDDNMFQIGK QS(-1.29)S(1.29)S(-9.59)S(-8.31)RDDNMFQIGK 3 3 -0.76617 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1186 706 56 56 3150 3341;3342 3572 3962 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12590 3572 3962 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12590 3572 3962 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12590 P54198 661 P54198 P54198 Protein HIRA HIRA sp|P54198|HIRA_HUMAN Protein HIRA OS=Homo sapiens GN=HIRA PE=1 SV=2 0.999999 61.4906 5.77783E-11 189.07 161.86 189.07 1 S PRKDSRLMPVSLSVQSPAALTAEKEAMCLSA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPXXXXXXX LMPVSLSVQS(1)PAALTAEK LMPVS(-80.82)LS(-61.49)VQS(61.49)PAALT(-102.01)AEK 10 3 0.36261 8399.1 0 0 26115 0 0 8860 0 0 21598 0 0 9563.3 0 0 10615 0 0 10324 0 0 16229 0 0 24883 0 0 33988 0 0 7949.4 0 0 24644 0 0 8905.1 0 0 22276 0 0 9687.9 0 0 11264 0 0 10871 0 0 17086 0 0 23934 0 0 32380 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 56232000 56232000 0 0 NaN 1187 708 661 661 2470 2608 2802 3129 2802 3129 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23315 2802 3129 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23315 2802 3129 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23315 P54259 645 P54259 P54259 Atrophin-1 ATN1 sp|P54259|ATN1_HUMAN Atrophin-1 OS=Homo sapiens GN=ATN1 PE=1 SV=3 0.999999 59.6148 0.00566916 86.288 46.243 86.288 1 S TASPPGPPPYGKRAPSPGAYKTATPPGYKPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX RAPS(1)PGAYK RAPS(59.61)PGAY(-59.61)K 4 3 1.0361 17936 0 0 20502 0 0 20481 0 0 19294 0 0 14725 0 0 19302 0 0 17279 0 0 19178 0 0 22006 0 0 1615.5 0 0 16982 0 0 19360 0 0 20411 0 0 19884 0 0 15324 0 0 19349 0 0 17596 0 0 19291 0 0 21513 0 0 1965 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19739000 19739000 0 0 NaN 1188 709 645 645 3183 3376 3608 3999 3608 3999 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9734 3608 3999 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9734 3608 3999 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9734 P54259 661 P54259 P54259 Atrophin-1 ATN1 sp|P54259|ATN1_HUMAN Atrophin-1 OS=Homo sapiens GN=ATN1 PE=1 SV=3 0.728246 4.35792 0.0221448 58.366 31.931 58.366 1 S PGAYKTATPPGYKPGSPPSFRTGTPPGYRGT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPXXXXXXXXXX T(0.001)AT(0.004)PPGYKPGS(0.728)PPS(0.267)FR T(-29.95)AT(-22.66)PPGY(-39.14)KPGS(4.36)PPS(-4.36)FR 11 3 1.1674 17564 0 0 18675 0 0 20553 0 0 17566 0 0 15752 0 0 18782 0 0 17211 0 0 19114 0 0 18644 0 0 7949.6 0 0 16631 0 0 17636 0 0 20468 0 0 18123 0 0 16291 0 0 18791 0 0 17488 0 0 19400 0 0 18335 0 0 7927.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 42547000 42547000 0 0 NaN 1189 709 661 661 4642 4953 5276 5862 5276 5862 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14000 5276 5862 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14000 5276 5862 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14000 Q68D20;P54278 59;445 Q68D20 Q68D20 Protein PMS2CL;Mismatch repair endonuclease PMS2 PMS2CL;PMS2 sp|Q68D20|PMS2L_HUMAN Protein PMS2CL OS=Homo sapiens GN=PMS2CL PE=2 SV=1;sp|P54278|PMS2_HUMAN Mismatch repair endonuclease PMS2 OS=Homo sapiens GN=PMS2 PE=1 SV=2 1 73.2601 0.0129889 73.26 36.926 73.26 1 S TENKPHSPKTPEPRRSPLGQKRGMSSSSTSD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPXXXXXXXXXX RS(1)PLGQK RS(73.26)PLGQK 2 3 0.30092 25723 0 0 35360 0 0 26363 0 0 33169 0 0 22994 0 0 24339 0 0 23681 0 0 25258 0 0 36768 0 0 1840.8 0 0 24343 0 0 33391 0 0 26469 0 0 34049 0 0 23556 0 0 24806 0 0 24431 0 0 25355 0 0 35724 0 0 2317.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 33896000 33896000 0 0 NaN 1190 710 59 59 3479 3696 3942 4378 3942 4378 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8006 3942 4378 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8006 3942 4378 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8006 P54578 143 P54578 P54578 Ubiquitin carboxyl-terminal hydrolase 14 USP14 sp|P54578|UBP14_HUMAN Ubiquitin carboxyl-terminal hydrolase 14 OS=Homo sapiens GN=USP14 PE=1 SV=3 1 89.2599 4.15675E-12 205.15 180.28 199.27 1 S ELKDALKRYAGALRASGEMASAQYITAALRD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPPX YAGALRAS(1)GEMASAQYITAALR Y(-124.09)AGALRAS(89.26)GEMAS(-89.26)AQY(-148.4)IT(-134.72)AALR 8 3 -1.0166 19108 0 0 23642 0 0 18568 0 0 23132 0 0 17636 0 0 21421 0 0 22866 0 0 24247 0 0 26287 0 0 117340 0 0 18079 0 0 22331 0 0 18727 0 0 23755 0 0 18030 0 0 21804 0 0 23118 0 0 27748 0 0 25792 0 0 111050 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 96015000 96015000 0 0 NaN 1191 711 143 143 457;5357 486;487;5706;5707 521;522;6084;6085 583;584;6762;6763 6085 6763 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21978 522 584 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21706 6085 6763 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21978 P54578 393 P54578 P54578 Ubiquitin carboxyl-terminal hydrolase 14 USP14 sp|P54578|UBP14_HUMAN Ubiquitin carboxyl-terminal hydrolase 14 OS=Homo sapiens GN=USP14 PE=1 SV=3 0.593257 1.63922 0.0446856 71.241 50.578 71.241 1 S EDKKVNQQPNTSDKKSSPQKEVKYEPFSFAD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPXXXXXXXX KS(0.593)S(0.407)PQKEVK KS(1.64)S(-1.64)PQKEVK 2 3 0.014432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1192 711 393 393 2232;4394 2360;4682 2541 2838 2541 2838 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8415 2541 2838 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8415 2541 2838 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8415 P54578 394 P54578 P54578 Ubiquitin carboxyl-terminal hydrolase 14 USP14 sp|P54578|UBP14_HUMAN Ubiquitin carboxyl-terminal hydrolase 14 OS=Homo sapiens GN=USP14 PE=1 SV=3 0.961545 13.9802 0.000313508 131.12 91.179 131.12 1 S DKKVNQQPNTSDKKSSPQKEVKYEPFSFADD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPXXXXXXXXX S(0.038)S(0.962)PQKEVK S(-13.98)S(13.98)PQKEVK 2 2 0.36282 11120 0 0 17450 0 0 11119 0 0 17393 0 0 11587 0 0 11006 0 0 12596 0 0 13157 0 0 19553 0 0 4401.1 0 0 10522 0 0 16484 0 0 11204 0 0 17759 0 0 11752 0 0 11352 0 0 12964 0 0 13247 0 0 18998 0 0 4448.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 4708700 4708700 0 0 NaN 1193 711 394 394 2232;4394 2360;4682 4986 5533 4986 5533 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8369 4986 5533 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8369 4986 5533 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8369 P54727 160 P54727 P54727 UV excision repair protein RAD23 homolog B RAD23B sp|P54727|RD23B_HUMAN UV excision repair protein RAD23 homolog B OS=Homo sapiens GN=RAD23B PE=1 SV=1 0.99014 21.126 5.66132E-12 195.19 179.91 195.19 1 S QEKPAEKPAETPVATSPTATDSTSGDSSRSN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPPXX QEKPAEKPAETPVAT(0.008)S(0.99)PT(0.002)ATDSTSGDSSR QEKPAEKPAET(-74.74)PVAT(-21.13)S(21.13)PT(-26.54)AT(-46.86)DS(-60.96)T(-67.82)S(-81.12)GDS(-91.25)S(-90.05)R 16 4 0.062927 19577 0 0 35029 0 0 23907 0 0 33578 0 0 16445 0 0 20385 0 0 19865 0 0 29128 0 0 37343 0 0 11600 0 0 18541 0 0 33083 0 0 23739 0 0 34354 0 0 17194 0 0 21153 0 0 20535 0 0 29228 0 0 36105 0 0 11597 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 146880000 146880000 0 0 NaN 1194 713 160 160 3011 3192 3415 3787 3415 3787 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9779 3415 3787 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9779 3415 3787 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9779 P54819 4 P54819 P54819 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed AK2 sp|P54819|KAD2_HUMAN Adenylate kinase 2, mitochondrial OS=Homo sapiens GN=AK2 PE=1 SV=2 1 103.117 0.00010001 116.86 95.305 116.86 1 S ____________MAPSVPAAEPEYPKGIRAV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX APS(1)VPAAEPEYPK APS(103.12)VPAAEPEY(-103.12)PK 3 3 0.73098 12759 0 0 12627 0 0 13583 0 0 13189 0 0 20723 0 0 15680 0 0 19969 0 0 16749 0 0 13241 0 0 7248.8 0 0 12076 0 0 11931 0 0 13715 0 0 13548 0 0 20591 0 0 15633 0 0 20178 0 0 16978 0 0 13351 0 0 7213.2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 11040000 11040000 0 0 NaN 1195 714 4 4 378 404 439 487;488 439 487 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14755 439 487 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14755 439 487 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14755 P55196 1238 P55196 P55196 Afadin MLLT4 sp|P55196|AFAD_HUMAN Afadin OS=Homo sapiens GN=MLLT4 PE=1 SV=3 0.797541 5.95416 4.75879E-05 128.26 97.287 128.26 1 S TQTYTREYFTFPASKSQDRMAPPQNQWPNYE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX EYFTFPAS(0.202)KS(0.798)QDR EY(-121.2)FT(-76.09)FPAS(-5.95)KS(5.95)QDR 10 3 -0.22742 4752.9 0 0 16352 0 0 5139.5 0 0 16281 0 0 5074.8 0 0 4714.9 0 0 6319.7 0 0 9530.9 0 0 15854 0 0 7722.1 0 0 4498.9 0 0 15446 0 0 5154.5 0 0 16535 0 0 5180.3 0 0 5317.1 0 0 6634.3 0 0 9606.3 0 0 15239 0 0 7491.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17289000 17289000 0 0 NaN 1196 720 1238 1238 1230 1294 1394 1545 1394 1545 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17680 1394 1545 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17680 1394 1545 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17680 P55196 1201 P55196 P55196 Afadin MLLT4 sp|P55196|AFAD_HUMAN Afadin OS=Homo sapiens GN=MLLT4 PE=1 SV=3 0.490772 0 5.09897E-12 191.21 158.41 191.21 S KSAYASGTTAKITSVSTGNLCTEEQTPPPRP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP IT(0.003)S(0.015)VS(0.491)T(0.491)GNLCTEEQTPPPRPEAYPIPTQTYTR IT(-22.16)S(-15.13)VS(0)T(0)GNLCT(-30.62)EEQT(-86.33)PPPRPEAY(-160.3)PIPT(-143.12)QT(-147.51)Y(-172.42)T(-147.51)R 5 4 0.69604 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1197 720 1201 1201 1970 2082 2246 2508 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17790 2246 2508 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17790 2246 2508 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17790 P55196 1107 P55196 P55196 Afadin MLLT4 sp|P55196|AFAD_HUMAN Afadin OS=Homo sapiens GN=MLLT4 PE=1 SV=3 0.999991 50.5927 7.3138E-05 124.17 104.12 124.17 1 S QGAIYHGLATLLNQPSPMMQRISDRRGSGKP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX QGAIYHGLATLLNQPS(1)PMMQR QGAIY(-116.89)HGLAT(-50.59)LLNQPS(50.59)PMMQR 16 3 1.6256 2507.2 0 0 3158.2 0 0 3409.7 0 0 3287.7 0 0 2392.1 0 0 2899.1 0 0 2919.6 0 0 3712.8 0 0 4514.4 0 0 21803 0 0 2375.8 0 0 2984.2 0 0 3370 0 0 3361.5 0 0 2496.6 0 0 2974.5 0 0 2990.3 0 0 4349.6 0 0 4386.7 0 0 20616 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6364800 6364800 0 0 NaN 1198 720 1107 1107 3029 3210;3211 3433;3434 3806;3807 3434 3807 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22870 3434 3807 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22870 3434 3807 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22870 P55196 1275 P55196 P55196 Afadin MLLT4 sp|P55196|AFAD_HUMAN Afadin OS=Homo sapiens GN=MLLT4 PE=1 SV=3 1 84.7534 0.00529344 84.753 23.643 84.753 1 S TDSNHSSIAIQRVTRSQEELREDKAYQLERH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(1)QEELREDK S(84.75)QEELREDK 1 3 -0.014161 33646 0 0 55072 0 0 33853 0 0 51957 0 0 41257 0 0 35171 0 0 36705 0 0 46957 0 0 66007 0 0 4803.5 0 0 31839 0 0 52006 0 0 34158 0 0 53268 0 0 41394 0 0 36160 0 0 38383 0 0 46789 0 0 63886 0 0 5609.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 91469000 91469000 0 0 NaN 1199 720 1275 1275 4224 4502 4798 5324 4798 5324 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8424 4798 5324 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8424 4798 5324 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8424 P55196 1182 P55196 P55196 Afadin MLLT4 sp|P55196|AFAD_HUMAN Afadin OS=Homo sapiens GN=MLLT4 PE=1 SV=3 1 94.729 0.000117654 112.43 94.513 112.43 1 S RADHRSSPNVANQPPSPGGKSAYASGTTAKI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPXXXXXXXXXXX SSPNVANQPPS(1)PGGK S(-94.73)S(-94.73)PNVANQPPS(94.73)PGGK 11 3 -1.4529 10181 0 0 19317 0 0 10821 0 0 20104 0 0 12201 0 0 10333 0 0 12583 0 0 14959 0 0 21455 0 0 8499.8 0 0 9636.5 0 0 18253 0 0 10877 0 0 20437 0 0 12314 0 0 10868 0 0 13033 0 0 15082 0 0 20794 0 0 8349.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28872000 28872000 0 0 NaN 1200 720 1182 1182 4387 4674 4978 5524 4978 5524 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9367 4978 5524 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9367 4978 5524 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9367 P55196 216 P55196 P55196 Afadin MLLT4 sp|P55196|AFAD_HUMAN Afadin OS=Homo sapiens GN=MLLT4 PE=1 SV=3 0.992118 20.9995 2.77383E-06 150.29 116.42 150.29 1 S EVYKDMPETSFTRTISNPEVVMKRRRQQKLE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX T(0.008)IS(0.992)NPEVVMK T(-21)IS(21)NPEVVMK 3 2 0.063641 15506 0 0 75097 0 0 17152 0 0 70932 0 0 20776 0 0 13294 0 0 19730 0 0 36846 0 0 77696 0 0 21249 0 0 14679 0 0 70918 0 0 17219 0 0 72159 0 0 20910 0 0 16233 0 0 21721 0 0 36686 0 0 74204 0 0 20862 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 109420000 109420000 0 0 NaN 1201 720 216 216 4752 5068;5069 5401;5402 6005;6006 5402 6006 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16739 5402 6006 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16739 5402 6006 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16739 P55199 309 P55199 P55199 RNA polymerase II elongation factor ELL ELL sp|P55199|ELL_HUMAN RNA polymerase II elongation factor ELL OS=Homo sapiens GN=ELL PE=1 SV=1 0.986972 18.7942 1.89794E-24 266.58 246.84 266.58 1 S QPQSTGSLLGDPAASSPPGERGRSASPPQKR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX KLCQPQSTGSLLGDPAAS(0.013)S(0.987)PPGER KLCQPQS(-142.85)T(-134.88)GS(-118.24)LLGDPAAS(-18.79)S(18.79)PPGER 19 3 1.099 9520.2 0 0 7031.7 0 0 9631.1 0 0 6911.8 0 0 6291.2 0 0 9872 0 0 6722.2 0 0 8845.2 0 0 7563.4 0 0 13770 0 0 9009 0 0 6642 0 0 9651.6 0 0 7151.7 0 0 6588.5 0 0 9776.2 0 0 6844.9 0 0 9327.1 0 0 7427.2 0 0 13171 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37897000 37897000 0 0 NaN 1202 721 309 309 2108 2229 2402 2678 2402 2678 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15519 2402 2678 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15519 2402 2678 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15519 P55199 437 P55199 P55199 RNA polymerase II elongation factor ELL ELL sp|P55199|ELL_HUMAN RNA polymerase II elongation factor ELL OS=Homo sapiens GN=ELL PE=1 SV=1 0.504891 1.02396 0.0094009 81.477 60.019 81.477 1 S TVRLGLPLLTDCAQPSRPHGSPSRSKPKKKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPXXXXXXX LGLPLLTDCAQPS(0.505)RPHGS(0.399)PS(0.096)R LGLPLLT(-40.27)DCAQPS(1.02)RPHGS(-1.02)PS(-7.2)R 13 4 0.14548 2227.8 0 0 3104 0 0 1947.1 0 0 2797.6 0 0 2399.7 0 0 3113.8 0 0 2802.8 0 0 3412.7 0 0 3953.4 0 0 5954.6 0 0 2107 0 0 2930.5 0 0 1983.1 0 0 2896.3 0 0 2415.3 0 0 3122 0 0 2865.1 0 0 3591.1 0 0 3852 0 0 5685.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 63367000 63367000 0 0 NaN 1203 721 437 437 2376 2512 2704 3022 2704 3022 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18880 2704 3022 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18880 2704 3022 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18880 P55265 825 P55265 P55265 Double-stranded RNA-specific adenosine deaminase ADAR sp|P55265|DSRAD_HUMAN Double-stranded RNA-specific adenosine deaminase OS=Homo sapiens GN=ADAR PE=1 SV=4 1 57.5496 0.00478848 88.282 62.458 57.55 1 S VTGASLRRTMLLLSRSPEAQPKTLPLTGSTF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPXXXXXXXXX S(1)PEAQPK S(57.55)PEAQPK 1 2 0.79863 40391 0 0 34237 0 0 45517 0 0 39646 0 0 39586 0 0 40909 0 0 39746 0 0 38789 0 0 38857 0 0 14196 0 0 38239 0 0 32374 0 0 45466 0 0 40397 0 0 40524 0 0 40949 0 0 40426 0 0 39418 0 0 38378 0 0 14265 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 141010000 141010000 0 0 NaN 1204 722 825 825 4086;4800 4357;5120 4647;5459 5160;6075 4647 5160 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7114 5459 6075 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17565 5459 6075 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17565 P55327 176 P55327 P55327 Tumor protein D52 TPD52 sp|P55327|TPD52_HUMAN Tumor protein D52 OS=Homo sapiens GN=TPD52 PE=1 SV=2 1 143.377 8.20541E-07 143.38 105.78 143.38 1 S ITKKLEDVKNSPTFKSFEEKVENLKSKVGGT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPXXXXXX S(1)FEEKVENLK S(143.38)FEEKVENLK 1 3 -0.14849 253160 0 0 25331 0 0 263700 0 0 24765 0 0 32173 0 0 261300 0 0 33610 0 0 106540 0 0 24942 0 0 25021 0 0 239590 0 0 23926 0 0 262100 0 0 29263 0 0 46332 0 0 249460 0 0 33906 0 0 113620 0 0 24978 0 0 26026 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 234450000 234450000 0 0 NaN 1205 723 176 176 2929;2930;3737 3105;3106;3977 3325;3326;4241 3685;3686;3687;4714 4241 4714 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18484 4241 4714 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18484 3325 3685 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15767 P55884 154 P55884 P55884 Eukaryotic translation initiation factor 3 subunit B EIF3B sp|P55884|EIF3B_HUMAN Eukaryotic translation initiation factor 3 subunit B OS=Homo sapiens GN=EIF3B PE=1 SV=3 0.970535 15.1774 1.78733E-05 124.76 113.66 124.76 1 S EPRALENGDADEPSFSDPEDFVDDVSEEELL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPPPPPPPP ALENGDADEPS(0.029)FS(0.971)DPEDFVDDVSEEELLGDVLK ALENGDADEPS(-15.18)FS(15.18)DPEDFVDDVS(-56.5)EEELLGDVLK 13 4 -0.30423 9214.3 0 0 7964.2 0 0 8529.5 0 0 8515 0 0 7792.7 0 0 9311.9 0 0 8194.4 0 0 16443 0 0 9651.5 0 0 219240 0 0 8716.5 0 0 7526.7 0 0 8619.8 0 0 8722.2 0 0 7958.6 0 0 9800.5 0 0 8361.8 0 0 22824 0 0 9461.3 0 0 206830 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 65050000 65050000 0 0 NaN 1206 725 154 154 289 310 331 369;370 331 369 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24131 331 369 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24131 331 369 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24131 P55884 119 P55884 P55884 Eukaryotic translation initiation factor 3 subunit B EIF3B sp|P55884|EIF3B_HUMAN Eukaryotic translation initiation factor 3 subunit B OS=Homo sapiens GN=EIF3B PE=1 SV=3 0.909966 10.0462 6.92884E-11 183.91 168.49 183.91 1 S QGEAPGEQARDERSDSRAQAVSEDAGGNEGR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.09)DS(0.91)RAQAVSEDAGGNEGR S(-10.05)DS(10.05)RAQAVS(-93.99)EDAGGNEGR 3 3 -0.9421 10370 0 0 7228.6 0 0 9786 0 0 8588.1 0 0 8272.8 0 0 10937 0 0 7023.1 0 0 9415.2 0 0 7740.7 0 0 1841.4 0 0 9810.5 0 0 6836.3 0 0 9866.7 0 0 8772.8 0 0 8467.6 0 0 10842 0 0 7228.6 0 0 9558.5 0 0 7607.3 0 0 1951.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29450000 29450000 0 0 NaN 1207 725 119 119 3676 3911 4171 4637 4171 4637 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6361 4171 4637 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6361 4171 4637 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6361 P56181 105 P56181 P56181 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial NDUFV3 sp|P56181|NDUV3_HUMAN NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial OS=Homo sapiens GN=NDUFV3 PE=1 SV=2 0.95404 14.3661 0.0250607 53.255 38.569 53.255 1 S ELSKFRMPQPSSGRESPRH____________ X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX MPQPS(0.011)S(0.035)GRES(0.954)PRH MPQPS(-19.36)S(-14.37)GRES(14.37)PRH 10 3 -1.0041 979.74 0 0 1901.9 0 0 1409.4 0 0 925.36 0 0 1593.1 0 0 1112.5 0 0 1885.1 0 0 2227.6 0 0 1267.6 0 0 1060.4 0 0 928.69 0 0 1791.1 0 0 1397.3 0 0 1012.7 0 0 1609.4 0 0 1122.7 0 0 1887.9 0 0 2223.2 0 0 1276.9 0 0 1050 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5036500 5036500 0 0 NaN 1208 727 105 105 2726 2891 3100 3447 3100 3447 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4757 3100 3447 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4757 3100 3447 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4757 P56192 825 P56192 P56192 Methionine--tRNA ligase, cytoplasmic MARS sp|P56192|SYMC_HUMAN Methionine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=MARS PE=1 SV=2 0.847374 7.44467 1.88904E-10 176.7 160.94 176.7 1 S IESLRQRFGGGQAKTSPKPAVVETVTTAKPQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPXX T(0.153)S(0.847)PKPAVVETVTTAK T(-7.44)S(7.44)PKPAVVET(-50.33)VT(-87.02)T(-99.47)AK 2 3 -0.057205 14619 0 0 22083 0 0 16085 0 0 22466 0 0 13788 0 0 14374 0 0 14905 0 0 17356 0 0 25052 0 0 9525.4 0 0 13839 0 0 20863 0 0 16086 0 0 22914 0 0 14154 0 0 14824 0 0 15397 0 0 17581 0 0 24289 0 0 9371 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 50919000 50919000 0 0 NaN 1209 728 825 825 4938 5263 5606 6230 5606 6230 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15621 5606 6230 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15621 5606 6230 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15621 P56211 104 P56211 P56211 cAMP-regulated phosphoprotein 19 ARPP19 sp|P56211|ARP19_HUMAN cAMP-regulated phosphoprotein 19 OS=Homo sapiens GN=ARPP19 PE=1 SV=2 0.999897 39.8638 0.0156085 78.903 41.791 78.903 1 S GDHIPTPQDLPQRKPSLVASKLAG_______ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX KPS(1)LVASK KPS(39.86)LVAS(-39.86)K 3 2 0.42505 26788 0 0 18363 0 0 26944 0 0 18187 0 0 24377 0 0 27332 0 0 26491 0 0 24207 0 0 19616 0 0 15910 0 0 25349 0 0 17346 0 0 27095 0 0 18832 0 0 24913 0 0 26979 0 0 26676 0 0 24882 0 0 19647 0 0 15541 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11905000 11905000 0 0 NaN 1210 729 104 104 2168 2290 2464 2744 2464 2744 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12754 2464 2744 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12754 2464 2744 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12754 P56211 23 P56211 P56211 cAMP-regulated phosphoprotein 19 ARPP19 sp|P56211|ARP19_HUMAN cAMP-regulated phosphoprotein 19 OS=Homo sapiens GN=ARPP19 PE=1 SV=2 0.806311 6.19396 0.000156603 105.14 76.125 105.14 1 S AASAEEQKEMEDKVTSPEKAEEAKLKARYPH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX VT(0.194)S(0.806)PEKAEEAK VT(-6.19)S(6.19)PEKAEEAK 3 3 -0.22306 21708 0 0 20457 0 0 20904 0 0 20919 0 0 18233 0 0 19500 0 0 17480 0 0 21478 0 0 21860 0 0 13887 0 0 20538 0 0 19328 0 0 21061 0 0 21428 0 0 18654 0 0 19660 0 0 17950 0 0 21886 0 0 21384 0 0 13574 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17732000 17732000 0 0 NaN 1211 729 23 23 5299 5646 6018 6685 6018 6685 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10680 6018 6685 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10680 6018 6685 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10680 P56524 632 P56524 P56524 Histone deacetylase 4 HDAC4 sp|P56524|HDAC4_HUMAN Histone deacetylase 4 OS=Homo sapiens GN=HDAC4 PE=1 SV=3 0.802022 6.07574 1.25727E-08 171.25 156.32 171.25 1 S IPVSFGGHRPLSRAQSSPASATFPVSVQEPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP AQS(0.802)S(0.198)PASATFPVSVQEPPTKPR AQS(6.08)S(-6.08)PAS(-57.75)AT(-100.26)FPVS(-146.59)VQEPPT(-158.76)KPR 3 4 -0.11453 15769 0 0 10068 0 0 16061 0 0 10560 0 0 11673 0 0 16763 0 0 10162 0 0 12611 0 0 10869 0 0 11598 0 0 14923 0 0 9513.4 0 0 16099 0 0 10912 0 0 12084 0 0 16495 0 0 10436 0 0 13160 0 0 10695 0 0 11213 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 34592000 34592000 0 0 NaN 1212 730 632 632 404 432 467 520;521 467 520 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15791 467 520 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15791 467 520 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15791 P56524;Q9UKV0;Q9UQL6 246;220;259 P56524;Q9UKV0;Q9UQL6 P56524 Histone deacetylase 4;Histone deacetylase 9;Histone deacetylase 5 HDAC4;HDAC9;HDAC5 sp|P56524|HDAC4_HUMAN Histone deacetylase 4 OS=Homo sapiens GN=HDAC4 PE=1 SV=3;sp|Q9UKV0|HDAC9_HUMAN Histone deacetylase 9 OS=Homo sapiens GN=HDAC9 PE=1 SV=2;sp|Q9UQL6|HDAC5_HUMAN Histone deacetylase 5 OS=Homo sapiens GN=HDAC5 PE=1 SV=2 0.791675 5.79806 0.0249713 54.584 11.415 54.584 1 S GAQDAKDDFPLRKTASEPNLKVRSRLKQKVA;GMYDAKDDFPLRKTASEPNLKLRSRLKQKVA;GPYDSRDDFPLRKTASEPNLKVRSRLKQKVA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX T(0.208)AS(0.792)EPNLK T(-5.8)AS(5.8)EPNLK 3 3 0.38548 29820 0 0 19410 0 0 27775 0 0 21136 0 0 19738 0 0 24979 0 0 16424 0 0 20246 0 0 21962 0 0 1792.9 0 0 28210 0 0 18346 0 0 27981 0 0 21658 0 0 20463 0 0 24810 0 0 17029 0 0 20546 0 0 21435 0 0 2156.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 62842000 62842000 0 0 NaN 1213 730;2179;2231 246;220;259 246 4626 4934 5256 5838 5256 5838 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11021 5256 5838 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11021 5256 5838 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11021 P56524 467 P56524 P56524 Histone deacetylase 4 HDAC4 sp|P56524|HDAC4_HUMAN Histone deacetylase 4 OS=Homo sapiens GN=HDAC4 PE=1 SV=3 0.805207 6.16335 2.89363E-56 392.33 363.4 392.33 1 S SIHKLRQHRPLGRTQSAPLPQNAQALQHLVI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP T(0.195)QS(0.805)APLPQNAQALQHLVIQQQHQQFLEK T(-6.16)QS(6.16)APLPQNAQALQHLVIQQQHQQFLEK 3 4 0.16366 10398 0 0 5643.4 0 0 10719 0 0 6133.9 0 0 5745.6 0 0 10140 0 0 5977.3 0 0 8056.9 0 0 5238.3 0 0 37130 0 0 9840.7 0 0 5333.9 0 0 10715 0 0 6332.6 0 0 6126.9 0 0 10029 0 0 6053 0 0 9281.2 0 0 5200 0 0 35148 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 177900000 177900000 0 0 NaN 1214 730 467 467 4881 5206 5546 6164 5546 6164 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20475 5546 6164 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20475 5546 6164 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20475 P57060 172 P57060 P57060 RWD domain-containing protein 2B RWDD2B sp|P57060|RWD2B_HUMAN RWD domain-containing protein 2B OS=Homo sapiens GN=RWDD2B PE=1 SV=1 0.347178 0 0.00664408 83.934 70.516 83.934 S WVREHASGYVSRDTSSSPTTGSTVQSVDLIF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP DT(0.103)S(0.087)S(0.347)S(0.347)PT(0.111)T(0.004)GSTVQSVDLIFTR DT(-5.29)S(-6)S(0)S(0)PT(-4.96)T(-19.06)GS(-29.26)T(-36.54)VQS(-63.04)VDLIFT(-81.17)R 4 3 2.2395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1215 732 172 172 833 881 937 1032 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21598 937 1032 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21598 937 1032 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21598 P57060 173 P57060 P57060 RWD domain-containing protein 2B RWDD2B sp|P57060|RWD2B_HUMAN RWD domain-containing protein 2B OS=Homo sapiens GN=RWDD2B PE=1 SV=1 0.347178 0 0.00664408 83.934 70.516 83.934 S VREHASGYVSRDTSSSPTTGSTVQSVDLIFT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DT(0.103)S(0.087)S(0.347)S(0.347)PT(0.111)T(0.004)GSTVQSVDLIFTR DT(-5.29)S(-6)S(0)S(0)PT(-4.96)T(-19.06)GS(-29.26)T(-36.54)VQS(-63.04)VDLIFT(-81.17)R 5 3 2.2395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1216 732 173 173 833 881 937 1032 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21598 937 1032 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21598 937 1032 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21598 P57081 391 P57081 P57081 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 WDR4 sp|P57081|WDR4_HUMAN tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 OS=Homo sapiens GN=WDR4 PE=1 SV=2 1 146.77 6.60847E-07 146.77 121.38 146.77 1 S EERLQQQLEKKQRRRSPPPGPDGHAKKMRPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX S(1)PPPGPDGHAK S(146.77)PPPGPDGHAK 1 3 -0.024214 32174 0 0 30230 0 0 30341 0 0 30390 0 0 32159 0 0 32352 0 0 32477 0 0 33708 0 0 31783 0 0 14245 0 0 30438 0 0 28558 0 0 30680 0 0 31225 0 0 32532 0 0 32385 0 0 33024 0 0 34188 0 0 31390 0 0 14193 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 83553000 83553000 0 0 NaN 1217 733 391 391 3447;4146 3661;4419 3904;4710 4333;4334;5227;5228 4710 5227 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7122 4710 5227 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7122 4710 5227 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7122 P57682 250 P57682 P57682 Krueppel-like factor 3 KLF3 sp|P57682|KLF3_HUMAN Krueppel-like factor 3 OS=Homo sapiens GN=KLF3 PE=1 SV=1 0.755417 4.8976 0.00853894 79.326 55.484 79.326 1 S PSVIVQPGKRPLPVESPDTQRKRRIHRCDYD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX RPLPVES(0.755)PDT(0.245)QR RPLPVES(4.9)PDT(-4.9)QR 7 3 -1.5477 9626.5 0 0 12379 0 0 11497 0 0 17113 0 0 15458 0 0 11601 0 0 14485 0 0 10998 0 0 14090 0 0 2826.8 0 0 9116.2 0 0 11721 0 0 11516 0 0 17194 0 0 15438 0 0 11872 0 0 14781 0 0 11141 0 0 13920 0 0 2916.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19553000 19553000 0 0 NaN 1218 734 250 250 3391 3601 3841 4266 3841 4266 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9658 3841 4266 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9658 3841 4266 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9658 P57737 462 P57737 P57737 Coronin-7 CORO7 sp|P57737|CORO7_HUMAN Coronin-7 OS=Homo sapiens GN=CORO7 PE=1 SV=2 0.994953 22.9479 4.00664E-06 138.01 113.16 138.01 1 S SLSSTSGIGTSPSLRSLQSLLGPSSKFRHAQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPXXXXX S(0.995)LQS(0.005)LLGPSSK S(22.95)LQS(-22.95)LLGPS(-91.22)S(-98.27)K 1 3 0.47508 6584.9 0 0 1889.3 0 0 6733.3 0 0 2597 0 0 6010.1 0 0 7314.2 0 0 7358.1 0 0 5229 0 0 2937 0 0 2531.6 0 0 6231.5 0 0 1788.8 0 0 6765.2 0 0 2699.1 0 0 6156.6 0 0 7099.4 0 0 7304.1 0 0 5402.2 0 0 3085.5 0 0 2504.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11152000 11152000 0 0 NaN 1219 735 462 462 3972 4232 4516 5019 4516 5019 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20051 4516 5019 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20051 4516 5019 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20051 P57740 86 P57740 P57740 Nuclear pore complex protein Nup107 NUP107 sp|P57740|NU107_HUMAN Nuclear pore complex protein Nup107 OS=Homo sapiens GN=NUP107 PE=1 SV=1 0.878654 8.60025 0.0100567 73.711 44.327 73.711 1 S LRQPDISCILGTGGKSPRLTQSSGFFGNLSM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPXXXXXXXXXXXXX QPDISCILGT(0.121)GGKS(0.879)PR QPDIS(-41.36)CILGT(-8.6)GGKS(8.6)PR 14 3 0.84703 12458 0 0 16288 0 0 11431 0 0 17123 0 0 7409.9 0 0 11888 0 0 7242.1 0 0 14117 0 0 18338 0 0 10390 0 0 11785 0 0 15391 0 0 11520 0 0 17446 0 0 7765.1 0 0 12197 0 0 7683.7 0 0 14387 0 0 17623 0 0 10110 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 51712000 51712000 0 0 NaN 1220 736 86 86 3096 3284 3514 3896 3514 3896 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17776 3514 3896 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17776 3514 3896 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17776 P57740 58 P57740 P57740 Nuclear pore complex protein Nup107 NUP107 sp|P57740|NU107_HUMAN Nuclear pore complex protein Nup107 OS=Homo sapiens GN=NUP107 PE=1 SV=1 0.798869 6.82237 0.000144243 109.72 71.624 109.72 1 S GNTTPRNQVIPRTPSSFRQPFTPTSRSLLRQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX T(0.035)PS(0.166)S(0.799)FRQPFTPTSR T(-13.57)PS(-6.82)S(6.82)FRQPFT(-67.34)PT(-86.03)S(-91.26)R 4 3 -0.026737 10386 0 0 7331.8 0 0 10447 0 0 7292.7 0 0 7015.6 0 0 9992.4 0 0 7160.8 0 0 9069.2 0 0 7002.5 0 0 4447 0 0 9828 0 0 6925.9 0 0 10474 0 0 7533.7 0 0 7324 0 0 9892.2 0 0 7277.8 0 0 9266.8 0 0 6916.1 0 0 4397.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17650000 17650000 0 0 NaN 1221 736 58 58 4858 5183 5522 6140 5522 6140 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13810 5522 6140 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13810 5522 6140 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13810 P57740 37 P57740 P57740 Nuclear pore complex protein Nup107 NUP107 sp|P57740|NU107_HUMAN Nuclear pore complex protein Nup107 OS=Homo sapiens GN=NUP107 PE=1 SV=1 1 127.191 1.61076E-07 161.8 141.36 161.8 1 S TARKQSAQKRVLLQASQDENFGNTTPRNQVI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPXXXX VLLQAS(1)QDENFGNTTPR VLLQAS(127.19)QDENFGNT(-127.86)T(-127.19)PR 6 3 -0.98021 5695.8 0 0 5797 0 0 6371.5 0 0 6606.4 0 0 5791.5 0 0 6298.2 0 0 6724.4 0 0 5997.5 0 0 6263.3 0 0 13425 0 0 5392.3 0 0 5480.9 0 0 6371.6 0 0 6728.9 0 0 5924.3 0 0 6348.3 0 0 6787.4 0 0 6432.1 0 0 6199.6 0 0 12780 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14365000 14365000 0 0 NaN 1222 736 37 37 5164 5502 5864 6518 5864 6518 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17639 5864 6518 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17639 5864 6518 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17639 P60174 58 P60174 P60174 Triosephosphate isomerase TPI1 sp|P60174|TPIS_HUMAN Triosephosphate isomerase OS=Homo sapiens GN=TPI1 PE=1 SV=3 1 81.998 8.75106E-16 223.97 191.23 223.97 1 S KFFVGGNWKMNGRKQSLGELIGTLNAAKVPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX KQS(1)LGELIGTLNAAK KQS(82)LGELIGT(-82)LNAAK 3 3 -0.26023 17816 0 0 17230 0 0 18601 0 0 16792 0 0 32494 0 0 19267 0 0 35044 0 0 24878 0 0 15741 0 0 40786 0 0 16861 0 0 16274 0 0 18860 0 0 17308 0 0 32172 0 0 19349 0 0 35021 0 0 25966 0 0 16350 0 0 38981 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 176390000 176390000 0 0 NaN 1223 738 58 58 2186 2310 2487 2767;2768;2769 2487 2767 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22586 2487 2767 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22586 2487 2767 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22586 P60228 399 P60228 P60228 Eukaryotic translation initiation factor 3 subunit E EIF3E sp|P60228|EIF3E_HUMAN Eukaryotic translation initiation factor 3 subunit E OS=Homo sapiens GN=EIF3E PE=1 SV=1 1 91.8936 2.56499E-16 228.29 183.24 228.29 1 S IDSKLGHVVMGNNAVSPYQQVIEKTKSLSFR X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPPXXXXXXX LGHVVMGNNAVS(1)PYQQVIEK LGHVVMGNNAVS(91.89)PY(-91.89)QQVIEK 12 3 0.15039 13449 0 0 22481 0 0 13985 0 0 21552 0 0 10543 0 0 14420 0 0 14359 0 0 15876 0 0 22249 0 0 44031 0 0 12729 0 0 21232 0 0 14017 0 0 22071 0 0 10964 0 0 14874 0 0 14649 0 0 17195 0 0 21618 0 0 41828 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 41552000 41552000 0 0 NaN 1224 739 399 399 2371 2504;2505 2693;2694 3007;3008 2694 3008 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18933 2694 3008 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18933 2694 3008 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18933 P60468 17 P60468 P60468 Protein transport protein Sec61 subunit beta SEC61B sp|P60468|SC61B_HUMAN Protein transport protein Sec61 subunit beta OS=Homo sapiens GN=SEC61B PE=1 SV=2 0.997463 27.1237 3.40633E-16 229.51 206.87 229.51 1 S PGPTPSGTNVGSSGRSPSKAVAARAAGSTVR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX PGPTPSGTNVGSSGRS(0.997)PS(0.002)K PGPT(-120.53)PS(-109.54)GT(-99.59)NVGS(-37.35)S(-33.76)GRS(27.12)PS(-27.12)K 16 3 0.24314 50235 0 0 34547 0 0 47683 0 0 40130 0 0 31520 0 0 54065 0 0 53618 0 0 55461 0 0 43896 0 0 7718.1 0 0 47526 0 0 32668 0 0 48005 0 0 41087 0 0 33244 0 0 53603 0 0 53251 0 0 55810 0 0 43725 0 0 8551.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 662150000 662150000 0 0 NaN 1225 740 17 17 2976 3155 3378 3746 3378 3746 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8528 3378 3746 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8528 3378 3746 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8528 P60468 49 P60468 P60468 Protein transport protein Sec61 subunit beta SEC61B sp|P60468|SC61B_HUMAN Protein transport protein Sec61 subunit beta OS=Homo sapiens GN=SEC61B PE=1 SV=2 0.41388 0 0.00012037 126.59 108.26 126.59 S RKNASCGTRSAGRTTSAGTGGMWRFYTEDSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T(0.414)T(0.172)S(0.414)AGTGGMWR T(0)T(-3.81)S(0)AGT(-34.9)GGMWR 3 2 -0.19547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1226 740 49 49 4983 5312 5659 6288 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13053 5659 6288 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13053 5659 6288 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13053 P60709;Q6S8J3;A5A3E0;P0CG38;Q9BYX7;P63267;P68133;P68032;P62736;P63261 33;733;733;733;33;34;35;35;35;33 P60709;P63267;P63261 P63261 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed ACTB;POTEE;POTEF;POTEI;POTEKP;ACTG2;ACTA1;ACTC1;ACTA2;ACTG1 sp|P60709|ACTB_HUMAN Actin, cytoplasmic 1 OS=Homo sapiens GN=ACTB PE=1 SV=1;sp|Q6S8J3|POTEE_HUMAN POTE ankyrin domain family member E OS=Homo sapiens GN=POTEE PE=1 SV=3;sp|A5A3E0|POTEF_HUMAN POTE ankyrin domain family member F OS=Homo sapiens GN=POTEF PE=1 1 86.6992 0.00473565 86.699 61.226 86.699 1 S KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX AVFPS(1)IVGRPR AVFPS(86.7)IVGRPR 5 3 0.28305 7414.9 0 0 7022 0 0 7005.9 0 0 6779.6 0 0 11292 0 0 6825.7 0 0 10689 0 0 8217.6 0 0 6592.3 0 0 999.09 0 0 7014.9 0 0 6632 0 0 7129.4 0 0 6976.6 0 0 11194 0 0 6859 0 0 10798 0 0 8219 0 0 6678.3 0 0 1131 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21641000 21641000 0 0 2.8571 1227 742;766;783 33;34;33 33 553 590 631 704 631 704 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17020 631 704 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17020 631 704 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17020 P60709;P63267;P68133;P68032;P62736;P63261 323;324;325;325;325;323 P60709;P63267;P63261 P63261 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed ACTB;ACTG2;ACTA1;ACTC1;ACTA2;ACTG1 sp|P60709|ACTB_HUMAN Actin, cytoplasmic 1 OS=Homo sapiens GN=ACTB PE=1 SV=1;sp|P63267|ACTH_HUMAN Actin, gamma-enteric smooth muscle OS=Homo sapiens GN=ACTG2 PE=1 SV=1;sp|P68133|ACTS_HUMAN Actin, alpha skeletal muscle OS=Homo sapiens GN=ACTA1 PE=1 SV=1;sp|P 0.875817 8.48378 0.00854393 74.769 50.387 74.769 1 S GIADRMQKEITALAPSTMKIKIIAPPERKYS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX EITALAPS(0.876)T(0.124)MK EIT(-50.51)ALAPS(8.48)T(-8.48)MK 8 3 -0.48433 6720.3 0 0 4722.4 0 0 5357.2 0 0 4271.9 0 0 7391.2 0 0 6695.6 0 0 9207.3 0 0 8667.7 0 0 5401.7 0 0 6613.1 0 0 6354 0 0 4458.5 0 0 5501.1 0 0 4452.7 0 0 7402.6 0 0 6640.3 0 0 9180.8 0 0 8817.1 0 0 5491.2 0 0 6427.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13972000 13972000 0 0 NaN 1228 742;766;783 323;324;323 323 1001 1057 1143 1261 1143 1261 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18310 1143 1261 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18310 1143 1261 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18310 P60709;Q6S8J3;P63261 235;935;235 P60709;P63261 P63261 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed ACTB;POTEE;ACTG1 sp|P60709|ACTB_HUMAN Actin, cytoplasmic 1 OS=Homo sapiens GN=ACTB PE=1 SV=1;sp|Q6S8J3|POTEE_HUMAN POTE ankyrin domain family member E OS=Homo sapiens GN=POTEE PE=1 SV=3;sp|P63261|ACTG_HUMAN Actin, cytoplasmic 2 OS=Homo sapiens GN=ACTG1 PE=1 SV=1 0.413502 1.3155 0.0155145 63.713 48.459 63.713 S ALDFEQEMATAASSSSLEKSYELPDGQVITI X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX LCYVALDFEQEMAT(0.004)AAS(0.091)S(0.185)S(0.305)S(0.414)LEK LCY(-60.94)VALDFEQEMAT(-19.83)AAS(-6.56)S(-3.48)S(-1.32)S(1.32)LEK 20 3 -1.8483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1229 742;783 235;235 235 2307 2438 2627 2937 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23449 2627 2937 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23449 2627 2937 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23449 P61006 185 P61006 P61006 Ras-related protein Rab-8A RAB8A sp|P61006|RAB8A_HUMAN Ras-related protein Rab-8A OS=Homo sapiens GN=RAB8A PE=1 SV=1 1 75.9202 1.98825E-10 180.41 141.8 135.29 1 S KAKMDKKLEGNSPQGSNQGVKITPDQQKRSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPXXXXXXXXXX LEGNSPQGS(1)NQGVK LEGNS(-75.92)PQGS(75.92)NQGVK 9 3 -0.071116 86147 0 0 46287 0 0 79745 0 0 45802 0 0 52966 0 0 82771 0 0 56208 0 0 61600 0 0 43452 0 0 63534 0 0 81493 0 0 43723 0 0 80345 0 0 47652 0 0 55365 0 0 81169 0 0 56710 0 0 64524 0 0 43415 0 0 61251 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 59040000 59040000 0 0 NaN 1230 745 185 185 2110;2326 2231;2459 2404;2648 2680;2959;2960 2648 2960 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11075 2404 2680 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10062 2404 2680 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10062 P61011 16 P61011 P61011 Signal recognition particle 54 kDa protein SRP54 sp|P61011|SRP54_HUMAN Signal recognition particle 54 kDa protein OS=Homo sapiens GN=SRP54 PE=1 SV=1 0.478123 0 4.10308E-05 116.74 93.177 116.74 S MVLADLGRKITSALRSLSNATIINEEVLNAM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.478)LS(0.478)NAT(0.044)IINEEVLNAMLK S(0)LS(0)NAT(-10.39)IINEEVLNAMLK 1 3 2.2443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1231 746 16 16 3989 4253 4540 5048 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24106 4540 5048 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24106 4540 5048 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24106 P61011 18 P61011 P61011 Signal recognition particle 54 kDa protein SRP54 sp|P61011|SRP54_HUMAN Signal recognition particle 54 kDa protein OS=Homo sapiens GN=SRP54 PE=1 SV=1 0.478123 0 4.10308E-05 116.74 93.177 116.74 S LADLGRKITSALRSLSNATIINEEVLNAMLK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.478)LS(0.478)NAT(0.044)IINEEVLNAMLK S(0)LS(0)NAT(-10.39)IINEEVLNAMLK 3 3 2.2443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1232 746 18 18 3989 4253 4540 5048 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24106 4540 5048 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24106 4540 5048 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24106 P61081 28 P61081 P61081 NEDD8-conjugating enzyme Ubc12 UBE2M sp|P61081|UBC12_HUMAN NEDD8-conjugating enzyme Ubc12 OS=Homo sapiens GN=UBE2M PE=1 SV=1 1 51.5667 0.0332659 51.567 31.733 51.567 1 S EEESAGGTKGSSKKASAAQLRIQKDINELNL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX KAS(1)AAQLR KAS(51.57)AAQLR 3 3 -0.65961 40851 0 0 23296 0 0 44881 0 0 26015 0 0 16749 0 0 22964 0 0 18207 0 0 20944 0 0 20354 0 0 1546.1 0 0 38670 0 0 22022 0 0 44619 0 0 26496 0 0 18681 0 0 23132 0 0 18522 0 0 21133 0 0 19992 0 0 1940.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8313600 8313600 0 0 NaN 1233 747 28 28 2009 2124 2289 2556 2289 2556 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8108 2289 2556 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8108 2289 2556 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8108 P61247 263 P61247 P61247 40S ribosomal protein S3a RPS3A sp|P61247|RS3A_HUMAN 40S ribosomal protein S3a OS=Homo sapiens GN=RPS3A PE=1 SV=2 1 170.022 1.07117E-10 183.37 174.43 183.37 1 S AKVERADGYEPPVQESV______________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPXXXXXXXXXXXXXX ADGYEPPVQES(1)V ADGY(-170.02)EPPVQES(170.02)V 11 2 0.2082 16396 0 0 17375 0 0 12726 0 0 16509 0 0 19161 0 0 16622 0 0 21507 0 0 18057 0 0 15715 0 0 25124 0 0 15501 0 0 16409 0 0 13109 0 0 17005 0 0 19093 0 0 16721 0 0 21621 0 0 18814 0 0 15752 0 0 24075 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 77316000 77316000 0 0 1.3484 1234 749 263 263 105 112 121 135 121 135 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14606 121 135 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14606 121 135 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14606 P61247 236 P61247 P61247 40S ribosomal protein S3a RPS3A sp|P61247|RS3A_HUMAN 40S ribosomal protein S3a OS=Homo sapiens GN=RPS3A PE=1 SV=2 0.792317 6.03818 0.00357905 91.401 57.559 91.401 1 S PKFELGKLMELHGEGSSSGKATGDETGAKVE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPXXXXXXXXXXX LMELHGEGS(0.792)S(0.197)S(0.01)GK LMELHGEGS(6.04)S(-6.04)S(-18.82)GK 9 3 1.7659 11000 0 0 7417.5 0 0 9552 0 0 8584.8 0 0 7877.4 0 0 12246 0 0 9778.7 0 0 11201 0 0 8260.9 0 0 3525.7 0 0 10403 0 0 7013.7 0 0 9684.7 0 0 8802.2 0 0 8118.3 0 0 12105 0 0 9821 0 0 11382 0 0 8215.4 0 0 3579.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18456000 18456000 0 0 NaN 1235 749 236 236 2467 2605 2799 3126 2799 3126 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14335 2799 3126 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14335 2799 3126 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14335 P61326;Q96A72 106;108 P61326 P61326 Protein mago nashi homolog;Protein mago nashi homolog 2 MAGOH;MAGOHB sp|P61326|MGN_HUMAN Protein mago nashi homolog OS=Homo sapiens GN=MAGOH PE=1 SV=1;sp|Q96A72|MGN2_HUMAN Protein mago nashi homolog 2 OS=Homo sapiens GN=MAGOHB PE=1 SV=1 0.977622 16.4035 0.0412343 45.88 26.556 45.88 1 S VIGDEHISFTTSKIGSLIDVNQSKDPEGLRV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX IGS(0.978)LIDVNQS(0.022)KDPEGLR IGS(16.4)LIDVNQS(-16.4)KDPEGLR 3 3 0.45732 7160.4 0 0 7967.9 0 0 7528.6 0 0 8650.6 0 0 7721.6 0 0 7192.6 0 0 7663.3 0 0 7809.9 0 0 8692 0 0 22244 0 0 6776.9 0 0 7530.9 0 0 7561.9 0 0 8817.1 0 0 7824.6 0 0 7324.2 0 0 7831.6 0 0 8480.2 0 0 8532.8 0 0 21126 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6063300 6063300 0 0 NaN 1236 750 106 106 1844 1947 2103 2357 2103 2357 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19732 2103 2357 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19732 2103 2357 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19732 P61619 408 P61619 P61619 Protein transport protein Sec61 subunit alpha isoform 1 SEC61A1 sp|P61619|S61A1_HUMAN Protein transport protein Sec61 subunit alpha isoform 1 OS=Homo sapiens GN=SEC61A1 PE=1 SV=2 0.956482 13.4201 0.00560376 91.233 71.471 91.233 1 S QLKEQQMVMRGHRETSMVHELNRYIPTAAAF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX ET(0.044)S(0.956)MVHELNR ET(-13.42)S(13.42)MVHELNR 3 2 0.41607 19277 0 0 32330 0 0 20727 0 0 36271 0 0 20444 0 0 19084 0 0 21350 0 0 25074 0 0 35665 0 0 9790.5 0 0 18247 0 0 30564 0 0 20786 0 0 36725 0 0 20789 0 0 19990 0 0 22081 0 0 25214 0 0 34583 0 0 9799.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10763000 10763000 0 0 NaN 1237 751 408 408 1195 1257 1356 1503 1356 1503 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11370 1356 1503 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11370 1356 1503 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11370 P61978 284 P61978 P61978 Heterogeneous nuclear ribonucleoprotein K HNRNPK sp|P61978|HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K OS=Homo sapiens GN=HNRNPK PE=1 SV=1 1 143.685 2.08543E-08 183.95 168.32 183.95 1 S GGRPMPPSRRDYDDMSPRRGPPPPPPGRGGR X;X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX DYDDMS(1)PR DY(-143.69)DDMS(143.69)PR 6 2 -0.47505 459690 0 0 421490 0 0 452630 0 0 402890 0 0 276980 0 0 468160 0 0 293920 0 0 398030 0 0 434580 0 0 48588 0 0 434950 0 0 398060 0 0 454060 0 0 415860 0 0 291820 0 0 465560 0 0 302230 0 0 403440 0 0 422840 0 0 54963 0 0 10 0 0 10 0 0 10 0 0 10 0 0 10 0 0 10 0 0 10 0 0 10 0 0 10 0 0 10 0 0 1006600000 1006600000 0 0 NaN 1238 752 284 284 851;3220 902;903;3414;3415 978;979;3648;3649;3650 1076;1077;1078;1079;1080;1081;1082;4045;4046;4047;4048 979 1078 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9385 979 1078 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9385 979 1078 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9385 P61978 379 P61978 P61978 Heterogeneous nuclear ribonucleoprotein K HNRNPK sp|P61978|HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K OS=Homo sapiens GN=HNRNPK PE=1 SV=1 1 81.6868 3.62769E-17 248.46 222.02 248.46 1 S QGGSGYDYSYAGGRGSYGDLGGPIITTQVTI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP GS(1)YGDLGGPIITTQVTIPK GS(81.69)Y(-81.69)GDLGGPIIT(-133.71)T(-162.32)QVT(-212.82)IPK 2 3 0.27258 8534 0 0 9337.2 0 0 9783.5 0 0 9053.6 0 0 12990 0 0 8070.5 0 0 14406 0 0 11612 0 0 9597.5 0 0 49819 0 0 8080 0 0 8818.9 0 0 9821.5 0 0 9297.4 0 0 13008 0 0 8271.5 0 0 14464 0 0 13012 0 0 9673.8 0 0 47179 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 90183000 90183000 0 0 NaN 1239 752 379 379 1648 1739 1880 2097;2098 1880 2097 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22477 1880 2097 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22477 1880 2097 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22477 P61978 216 P61978 P61978 Heterogeneous nuclear ribonucleoprotein K HNRNPK sp|P61978|HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K OS=Homo sapiens GN=HNRNPK PE=1 SV=1 0.999999 58.8409 9.12093E-24 285.06 223.65 285.06 1 S RVVECIKIILDLISESPIKGRAQPYDPNFYD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPXXXXXXXXXX IILDLISES(1)PIKGR IILDLIS(-58.84)ES(58.84)PIKGR 9 3 0.38301 36842 0 0 71183 0 0 38397 0 0 61426 0 0 37551 0 0 36198 0 0 42498 0 0 50431 0 0 70249 0 0 32413 0 0 34868 0 0 67189 0 0 38573 0 0 63260 0 0 38253 0 0 37649 0 0 43781 0 0 51011 0 0 68138 0 0 31688 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 111510000 111510000 0 0 NaN 1240 752 216 216 1858;1859 1962;1963 2119;2120 2376;2377 2120 2377 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23693 2120 2377 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23693 2120 2377 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23693 P61978 116 P61978 P61978 Heterogeneous nuclear ribonucleoprotein K HNRNPK sp|P61978|HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K OS=Homo sapiens GN=HNRNPK PE=1 SV=1 0.997028 25.8068 1.37163E-35 320.16 298.51 320.16 1 S LKKIIPTLEEGLQLPSPTATSQLPLESDAVE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPPPPPPPP IIPTLEEGLQLPS(0.997)PT(0.003)ATSQLPLESDAVECLNYQHYK IIPT(-124.24)LEEGLQLPS(25.81)PT(-25.81)AT(-35)S(-44.1)QLPLES(-99.09)DAVECLNY(-246.67)QHY(-264.26)K 13 4 0.14502 18295 0 0 37331 0 0 23606 0 0 31904 0 0 11318 0 0 25712 0 0 12431 0 0 23855 0 0 37073 0 0 31465 0 0 17331 0 0 35234 0 0 23316 0 0 32989 0 0 12250 0 0 26085 0 0 13275 0 0 24948 0 0 35535 0 0 30180 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 829670000 829670000 0 0 NaN 1241 752 116 116 1862 1966 2123 2380 2123 2380 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23700 2123 2380 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23700 2123 2380 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23700 P61978 121 P61978 P61978 Heterogeneous nuclear ribonucleoprotein K HNRNPK sp|P61978|HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K OS=Homo sapiens GN=HNRNPK PE=1 SV=1 0.25 0 1.40404E-12 194.25 183.14 194.25 S PTLEEGLQLPSPTATSQLPLESDAVECLNYQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IIPTLEEGLQLPS(0.25)PT(0.25)AT(0.25)S(0.25)QLPLESDAVECLNYQHYK IIPT(-89.03)LEEGLQLPS(0)PT(0)AT(0)S(0)QLPLES(-62.28)DAVECLNY(-145.09)QHY(-154.35)K 18 6 0.021256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1242 752 121 121 1862 1966 2124 2381 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23716 2124 2381 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23716 2124 2381 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23716 P62263 139 P62263 P62263 40S ribosomal protein S14 RPS14 sp|P62263|RS14_HUMAN 40S ribosomal protein S14 OS=Homo sapiens GN=RPS14 PE=1 SV=3 0.796095 5.91548 5.21737E-11 205.3 162.87 205.3 1 S MKIGRIEDVTPIPSDSTRRKGGRRGRRL___ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPXXXXXXXXXXXXX IEDVTPIPSDS(0.796)T(0.204)R IEDVT(-106.14)PIPS(-52.16)DS(5.92)T(-5.92)R 11 2 -0.22812 12725 0 0 12648 0 0 11505 0 0 12431 0 0 10627 0 0 12329 0 0 11432 0 0 12041 0 0 14573 0 0 16398 0 0 12037 0 0 11947 0 0 11645 0 0 12775 0 0 10851 0 0 12390 0 0 11684 0 0 12583 0 0 14246 0 0 15719 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17753000 17753000 0 0 NaN 1243 759 139 139 1810 1910 2064 2314 2064 2314 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16074 2064 2314 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16074 2064 2314 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16074 P62306 2 P62306 P62306 Small nuclear ribonucleoprotein F SNRPF sp|P62306|RUXF_HUMAN Small nuclear ribonucleoprotein F OS=Homo sapiens GN=SNRPF PE=1 SV=1 1 51.6879 0.0177574 51.688 40.815 51.688 1 S ______________MSLPLNPKPFLNGLTGK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX S(1)LPLNPK S(51.69)LPLNPK 1 2 -2.0554 6820.5 0 0 7301.1 0 0 6593 0 0 7760.8 0 0 6345.9 0 0 6155 0 0 6149.9 0 0 7397.6 0 0 7321.6 0 0 5979.8 0 0 6453.1 0 0 6899.8 0 0 6648.5 0 0 7914.7 0 0 6452.7 0 0 6267.9 0 0 6301.6 0 0 7552.4 0 0 7174.6 0 0 5801.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5382100 5382100 0 0 NaN 1244 761 2 2 3964 4223 4506 5008 4506 5008 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16843 4506 5008 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16843 4506 5008 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16843 P62316 2 P62316 P62316 Small nuclear ribonucleoprotein Sm D2 SNRPD2 sp|P62316|SMD2_HUMAN Small nuclear ribonucleoprotein Sm D2 OS=Homo sapiens GN=SNRPD2 PE=1 SV=1 1 60.1508 0.00924537 60.151 40.389 60.151 1 S ______________MSLLNKPKSEMTPEELQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX S(1)LLNKPK S(60.15)LLNKPK 1 2 -0.33606 36985 0 0 29124 0 0 37397 0 0 27734 0 0 61705 0 0 34262 0 0 59084 0 0 43694 0 0 30415 0 0 13781 0 0 34999 0 0 27504 0 0 37926 0 0 28666 0 0 61120 0 0 34195 0 0 59483 0 0 43878 0 0 31226 0 0 13988 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 88907000 88907000 0 0 NaN 1245 762 2 2 3950 4209 4491 4992 4491 4992 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15022 4491 4992 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15022 4491 4992 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15022 P62328 2 P62328 P62328 Thymosin beta-4;Hematopoietic system regulatory peptide TMSB4X sp|P62328|TYB4_HUMAN Thymosin beta-4 OS=Homo sapiens GN=TMSB4X PE=1 SV=2 1 84.17 3.88758E-05 84.17 58.232 84.17 1 S ______________MSDKPDMAEIEKFDKSK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPXXXXX S(1)DKPDMAEIEK S(84.17)DKPDMAEIEK 1 2 -0.58313 16373 0 0 16420 0 0 16131 0 0 14832 0 0 14933 0 0 15210 0 0 15089 0 0 16328 0 0 17147 0 0 17207 0 0 15492 0 0 15502 0 0 16242 0 0 15332 0 0 15229 0 0 15275 0 0 15408 0 0 16854 0 0 16831 0 0 16580 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16119000 16119000 0 0 0.11949 1246 763 2 2 3661 3896 4155 4618 4155 4618 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15674 4155 4618 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15674 4155 4618 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15674 P62633 49 P62633 P62633 Cellular nucleic acid-binding protein CNBP sp|P62633|CNBP_HUMAN Cellular nucleic acid-binding protein OS=Homo sapiens GN=CNBP PE=1 SV=1 0.803764 6.131 6.44429E-07 146.19 122.71 146.19 1 S RGGFTSDRGFQFVSSSLPDICYRCGESGHLA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPXXXXXXXX GFQFVSS(0.196)S(0.804)LPDICYR GFQFVS(-33.75)S(-6.13)S(6.13)LPDICY(-111.28)R 8 3 -0.21138 2856.4 0 0 2558.3 0 0 1572 0 0 1891.2 0 0 4872.6 0 0 2054.5 0 0 4939.1 0 0 3174.6 0 0 2574.4 0 0 8394.7 0 0 2698.1 0 0 2413 0 0 1697.3 0 0 1985.1 0 0 4748.5 0 0 2081.9 0 0 4959.6 0 0 3393.9 0 0 2640.5 0 0 7978 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 42799000 42799000 0 0 NaN 1247 764 49 49 1422 1499 1608 1778 1608 1778 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22759 1608 1778 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22759 1608 1778 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22759 P62750 43 P62750 P62750 60S ribosomal protein L23a RPL23A sp|P62750|RL23A_HUMAN 60S ribosomal protein L23a OS=Homo sapiens GN=RPL23A PE=1 SV=1 0.791505 5.80452 0.00284351 95.483 56.679 95.483 1 S VLKGVHSHKKKKIRTSPTFRRPKTLRLRRQP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX IRT(0.208)S(0.792)PT(0.001)FR IRT(-5.8)S(5.8)PT(-31.79)FR 4 3 -0.44975 12809 0 0 26191 0 0 14371 0 0 25329 0 0 16906 0 0 13652 0 0 18384 0 0 20275 0 0 27767 0 0 1804.4 0 0 12126 0 0 24737 0 0 14415 0 0 25872 0 0 17037 0 0 14292 0 0 18899 0 0 20135 0 0 26999 0 0 2168.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 144640000 144640000 0 0 NaN 1248 767 43 43 1932 2040 2202 2462 2202 2462 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10544 2202 2462 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10544 2202 2462 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10544 P62753 242 P62753 P62753 40S ribosomal protein S6 RPS6 sp|P62753|RS6_HUMAN 40S ribosomal protein S6 OS=Homo sapiens GN=RPS6 PE=1 SV=1 0.836138 11.4061 3.82459E-07 158.91 124.53 158.91 1 S QIAKRRRLSSLRASTSKSESSQK________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX AS(0.06)T(0.06)S(0.836)KS(0.04)ES(0.003)SQK AS(-11.41)T(-11.41)S(11.41)KS(-13.21)ES(-24.54)S(-44.7)QK 4 3 0.10608 65225 0 0 56312 0 0 73754 0 0 55537 0 0 29339 0 0 63949 0 0 31166 0 0 55134 0 0 64541 0 0 3806.7 0 0 61751 0 0 53192 0 0 73235 0 0 57206 0 0 32453 0 0 63620 0 0 32550 0 0 55760 0 0 62267 0 0 4860.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 126440000 126440000 0 0 NaN 1249 768 242 242 514;2591;2592;3346 546;2737;2738;3548 586 653 586 653 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6613 586 653 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6613 586 653 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6613 P62753 236 P62753 P62753 40S ribosomal protein S6 RPS6 sp|P62753|RS6_HUMAN 40S ribosomal protein S6 OS=Homo sapiens GN=RPS6 PE=1 SV=1 0.883994 8.85318 9.86117E-05 109.44 90.743 106.79 2 S KEKRQEQIAKRRRLSSLRASTSKSESSQK__ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPXX RLS(0.116)S(0.884)LRAS(0.091)T(0.9)S(0.009)K RLS(-8.85)S(8.85)LRAS(-10.01)T(10.01)S(-19.99)K 4 4 0.22492 0 24283 0 0 32451 0 0 27104 0 0 29013 0 0 23408 0 0 24796 0 0 24590 0 0 28618 0 0 37528 0 0 5472.7 0 0 22988 0 0 30635 0 0 27087 0 0 29932 0 0 24002 0 0 25101 0 0 25328 0 0 28723 0 0 36480 0 0 5815.6 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 62822000 0 62822000 0 NaN 1250 768 236 236 2591;2592;3346 2737;2738;3548 2937;3786 3271;4204 3786 4204 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10822 2937 3271 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12124 2937 3271 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12124 P62995;Q13595 264;260 P62995;Q13595 P62995 Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha TRA2B;TRA2A sp|P62995|TRA2B_HUMAN Transformer-2 protein homolog beta OS=Homo sapiens GN=TRA2B PE=1 SV=1;sp|Q13595|TRA2A_HUMAN Transformer-2 protein homolog alpha OS=Homo sapiens GN=TRA2A PE=1 SV=1 0.999726 35.6212 1.35673E-06 162.94 136.27 162.94 1;2 S GWRAAQDRDQIYRRRSPSPYYSRGGYRSRSR;GYDRYEDYDYRYRRRSPSPYYSRYRSRSRSR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX RRS(1)PSPYYSR RRS(35.62)PS(-35.62)PY(-101.46)Y(-124.78)S(-112.14)R 3 3 0.57908 42918 311880 0 55322 382180 0 47236 328060 0 49347 342910 0 79711 328850 0 46479 351540 0 101180 426930 0 72617 88822 0 59878 88367 0 7784.8 119380 0 40628 295180 0 52226 360810 0 47753 329600 0 50987 354620 0 79238 334740 0 47058 348910 0 100830 420600 0 72061 89743 0 60833 87664 0 9010.9 114460 0 2 6 0 2 6 0 2 6 0 2 6 0 2 6 0 2 6 0 2 6 0 2 3 0 2 3 0 2 6 0 1272200000 179660000 1092500000 0 NaN 1251 776;970 264;260 264 3453;3485;4194 3668;3669;3702;4469;4470 3911;3912;3913;3948;4763;4764 4344;4345;4346;4347;4348;4386;5288;5289 3911 4344 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5855 3911 4344 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5855 3911 4344 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5855 P62995;Q13595 266;262 P62995;Q13595 P62995 Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha TRA2B;TRA2A sp|P62995|TRA2B_HUMAN Transformer-2 protein homolog beta OS=Homo sapiens GN=TRA2B PE=1 SV=1;sp|Q13595|TRA2A_HUMAN Transformer-2 protein homolog alpha OS=Homo sapiens GN=TRA2A PE=1 SV=1 0.986072 18.5406 0.000173068 119.02 92.98 71.03 2 S DRYEDYDYRYRRRSPSPYYSRYRSRSRSRSY;RAAQDRDQIYRRRSPSPYYSRGGYRSRSRSR X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX S(0.999)PS(0.986)PY(0.014)YSR S(32.46)PS(18.54)PY(-18.54)Y(-39.54)S(-45.69)R 3 2 0.20345 0 311880 0 0 382180 0 0 328060 0 0 342910 0 0 328850 0 0 351540 0 0 426930 0 0 88822 0 0 88367 0 0 119380 0 0 295180 0 0 360810 0 0 329600 0 0 354620 0 0 334740 0 0 348910 0 0 420600 0 0 89743 0 0 87664 0 0 114460 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 3 0 0 3 0 0 6 0 1092500000 0 1092500000 0 NaN 1252 776;970 266;262 266 3453;3485;4194 3668;3669;3702;4469;4470 3912;3913;3948;4764 4345;4346;4347;4348;4386;5289 4764 5289 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8952 3912 4346 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6196 3912 4346 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6196 P62995 39 P62995 P62995 Transformer-2 protein homolog beta TRA2B sp|P62995|TRA2B_HUMAN Transformer-2 protein homolog beta OS=Homo sapiens GN=TRA2B PE=1 SV=1 0.994964 22.9571 0.0118366 84.31 34.277 84.31 1 S HGSGKSARHTPARSRSKEDSRRSRSKSRSRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX S(0.995)KEDS(0.005)RR S(22.96)KEDS(-22.96)RR 1 3 -0.72298 46348 0 0 45595 0 0 47712 0 0 47946 0 0 45578 0 0 48846 0 0 49182 0 0 51357 0 0 54329 0 0 4910.4 0 0 43862 0 0 43085 0 0 47945 0 0 49100 0 0 46434 0 0 48961 0 0 50031 0 0 51565 0 0 53388 0 0 5812.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 442520000 442520000 0 0 NaN 1253 776 39 39 3882 4136 4413 4907 4413 4907 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4769 4413 4907 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4769 4413 4907 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4769 P63165 2 P63165 P63165 Small ubiquitin-related modifier 1 SUMO1 sp|P63165|SUMO1_HUMAN Small ubiquitin-related modifier 1 OS=Homo sapiens GN=SUMO1 PE=1 SV=1 0.99961 34.6921 1.03035E-07 128.06 114.23 128.06 1 S ______________MSDQEAKPSTEDLGDKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(1)DQEAKPSTEDLGDKK S(34.69)DQEAKPS(-34.69)T(-42.98)EDLGDKK 1 4 -0.68936 44322 0 0 41189 0 0 39720 0 0 44521 0 0 46565 0 0 43161 0 0 56151 0 0 48360 0 0 46500 0 0 12066 0 0 41923 0 0 38929 0 0 40362 0 0 45488 0 0 46976 0 0 43411 0 0 56432 0 0 48670 0 0 46291 0 0 12481 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 79271000 79271000 0 0 NaN 1254 778 2 2 3668 3903 4163 4628;4629 4163 4628 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12189 4163 4628 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12189 4163 4628 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12189 P63218 2 P63218 P63218 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 GNG5 sp|P63218|GBG5_HUMAN Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Homo sapiens GN=GNG5 PE=1 SV=3 0.700324 4.35683 1.88181E-06 53.775 45.843 53.775 1 S ______________MSGSSSVAAMKKVVQQL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPXXXXXX S(0.7)GS(0.257)S(0.037)S(0.006)VAAMK S(4.36)GS(-4.36)S(-12.75)S(-20.93)VAAMK 1 2 0.27804 16593 0 0 13298 0 0 15518 0 0 14193 0 0 17090 0 0 14892 0 0 15734 0 0 16804 0 0 14764 0 0 4716.9 0 0 15697 0 0 12567 0 0 15704 0 0 14529 0 0 17230 0 0 14929 0 0 16054 0 0 16924 0 0 14609 0 0 4830.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11238000 11238000 0 0 NaN 1255 781 2 2 3819 4070;4071 4343 4825 4343 4825 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7962 4343 4825 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7962 4343 4825 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7962 P63218 4 P63218 P63218 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 GNG5 sp|P63218|GBG5_HUMAN Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Homo sapiens GN=GNG5 PE=1 SV=3 0.566039 2.22024 3.78596E-05 49.418 36.21 49.418 1 S ____________MSGSSSVAAMKKVVQQLRL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX S(0.339)GS(0.566)S(0.082)S(0.012)VAAMK S(-2.22)GS(2.22)S(-8.39)S(-16.58)VAAMK 3 2 0.57293 35444 0 0 31601 0 0 30723 0 0 29035 0 0 29010 0 0 36711 0 0 36144 0 0 37505 0 0 33475 0 0 5816 0 0 33522 0 0 29838 0 0 31201 0 0 30093 0 0 29639 0 0 36476 0 0 36375 0 0 37765 0 0 33143 0 0 6344.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 65012000 65012000 0 0 NaN 1256 781 4 4 3819 4070;4071 4344 4826 4344 4826 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11984 4344 4826 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11984 4344 4826 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11984 P67809 314 P67809 P67809 Nuclease-sensitive element-binding protein 1 YBX1 sp|P67809|YBOX1_HUMAN Nuclease-sensitive element-binding protein 1 OS=Homo sapiens GN=YBX1 PE=1 SV=3 0.863256 8.00232 2.86023E-05 123.36 113.99 123.36 1 S DGKETKAADPPAENSSAPEAEQGGAE_____ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPXXXXX AADPPAENS(0.137)S(0.863)APEAEQGGAE AADPPAENS(-8)S(8)APEAEQGGAE 10 3 -0.85479 10734 0 0 10715 0 0 10215 0 0 10007 0 0 14059 0 0 12388 0 0 12564 0 0 11918 0 0 10469 0 0 4560.8 0 0 10155 0 0 10118 0 0 10360 0 0 10356 0 0 14017 0 0 12314 0 0 12803 0 0 12110 0 0 10418 0 0 4570.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 125370000 125370000 0 0 0.97451 1257 785 314 314 19 21 24 32 24 32 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8601 24 32 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8601 24 32 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8601 P67809 165 P67809 P67809 Nuclease-sensitive element-binding protein 1 YBX1 sp|P67809|YBOX1_HUMAN Nuclease-sensitive element-binding protein 1 OS=Homo sapiens GN=YBX1 PE=1 SV=3 0.999974 45.9095 5.11809E-46 358.69 340.87 358.69 1 S RRRGPPRNYQQNYQNSESGEKNEGSESAPEG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPPPPPP NYQQNYQNS(1)ESGEKNEGSESAPEGQAQQR NY(-218.92)QQNY(-181.45)QNS(45.91)ES(-45.91)GEKNEGS(-172.29)ES(-206.49)APEGQAQQR 9 4 -0.11077 7530.1 0 0 8853 0 0 8025.4 0 0 7972.4 0 0 5654.4 0 0 9103.5 0 0 8501.2 0 0 9255.1 0 0 9388 0 0 36138 0 0 7127.2 0 0 8358.1 0 0 8029 0 0 8257.8 0 0 5919.2 0 0 9144.4 0 0 8541.1 0 0 10367 0 0 9225.5 0 0 34242 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 42992000 42992000 0 0 NaN 1258 785 165 165 2969 3148 3370 3735;3736 3370 3735 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8260 3370 3735 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8260 3370 3735 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8260 P67870 209 P67870 P67870 Casein kinase II subunit beta CSNK2B sp|P67870|CSK2B_HUMAN Casein kinase II subunit beta OS=Homo sapiens GN=CSNK2B PE=1 SV=1 0.998635 28.6436 4.61744E-23 257.2 233.33 251.1 1 S PMAYQLQLQAASNFKSPVKTIR_________ X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX IHPMAYQLQLQAAS(0.001)NFKS(0.999)PVK IHPMAY(-174.07)QLQLQAAS(-28.64)NFKS(28.64)PVK 18 4 -0.10034 20131 0 0 23454 0 0 18988 0 0 21923 0 0 24364 0 0 21805 0 0 30965 0 0 24908 0 0 25030 0 0 35441 0 0 19044 0 0 22147 0 0 19264 0 0 22601 0 0 24495 0 0 21967 0 0 31040 0 0 25932 0 0 24949 0 0 33949 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 33686000 33686000 0 0 NaN 1259 786 209 209 1852 1955;1956 2112;2113 2366;2367;2368 2112 2366 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18369 2113 2368 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19893 2113 2368 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19893 P68363;P68366;Q9BQE3;Q9H853;Q9NY65 232;232;232;171;232 P68363;Q9BQE3 P68363 Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1C chain;Putative tubulin-like protein alpha-4B;Tubulin alpha-8 chain TUBA1B;TUBA4A;TUBA1C;TUBA4B;TUBA8 sp|P68363|TBA1B_HUMAN Tubulin alpha-1B chain OS=Homo sapiens GN=TUBA1B PE=1 SV=1;sp|P68366|TBA4A_HUMAN Tubulin alpha-4A chain OS=Homo sapiens GN=TUBA4A PE=1 SV=1;sp|Q9BQE3|TBA1C_HUMAN Tubulin alpha-1C chain OS=Homo sapiens GN=TUBA1C PE=1 SV=1;sp|Q9H853|TBA 0.999919 41.7922 0.0100392 73.688 62.475 73.688 1 S LDIERPTYTNLNRLISQIVSSITASLRFDGA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX LIS(1)QIVSSITASLR LIS(41.79)QIVS(-41.79)S(-49.31)IT(-55.94)AS(-64.79)LR 3 3 -0.056875 0 0 0 282.68 0 0 0 0 0 443.71 0 0 263.68 0 0 0 0 0 166.58 0 0 0 0 0 0 0 0 692.5 0 0 0 0 0 267.95 0 0 0 0 0 438.63 0 0 250.48 0 0 0 0 0 169.67 0 0 0 0 0 0 0 0 652.07 0 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 1810000 1810000 0 0 NaN 1260 789;1805 232;232 232 2412 2549 2742 3062 2742 3062 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24802 2742 3062 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24802 2742 3062 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24802 P68363;P68366 340;340 P68363 P68363 Tubulin alpha-1B chain;Tubulin alpha-4A chain TUBA1B;TUBA4A sp|P68363|TBA1B_HUMAN Tubulin alpha-1B chain OS=Homo sapiens GN=TUBA1B PE=1 SV=1;sp|P68366|TBA4A_HUMAN Tubulin alpha-4A chain OS=Homo sapiens GN=TUBA4A PE=1 SV=1 1 83.8776 7.59897E-05 122.14 95.99 122.14 1 S PKDVNAAIATIKTKRSIQFVDWCPTGFKVGI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX S(1)IQFVDWCPTGFK S(83.88)IQFVDWCPT(-83.88)GFK 1 3 -0.34527 19839 0 0 32728 0 0 17643 0 0 32982 0 0 45737 0 0 18846 0 0 44125 0 0 30417 0 0 35580 0 0 14392 0 0 18765 0 0 30918 0 0 18232 0 0 33622 0 0 44725 0 0 19693 0 0 44759 0 0 30496 0 0 35469 0 0 14256 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 170320000 170320000 0 0 NaN 1261 789 340 340 3857 4110 4386 4877 4386 4877 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23567 4386 4877 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23567 4386 4877 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23567 P68363;Q71U36;Q9BQE3;Q6PEY2;Q13748 48;48;48;48;48 P68363;Q9BQE3 P68363 Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain TUBA1B;TUBA1A;TUBA1C;TUBA3E;TUBA3C sp|P68363|TBA1B_HUMAN Tubulin alpha-1B chain OS=Homo sapiens GN=TUBA1B PE=1 SV=1;sp|Q71U36|TBA1A_HUMAN Tubulin alpha-1A chain OS=Homo sapiens GN=TUBA1A PE=1 SV=1;sp|Q9BQE3|TBA1C_HUMAN Tubulin alpha-1C chain OS=Homo sapiens GN=TUBA1C PE=1 SV=1;sp|Q6PEY2|TBA 0.990406 20.1436 4.05719E-11 181.82 147.62 181.82 1 S DGQMPSDKTIGGGDDSFNTFFSETGAGKHVP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPXXX TIGGGDDS(0.99)FNT(0.01)FFSETGAGK T(-49.1)IGGGDDS(20.14)FNT(-20.14)FFS(-114.18)ET(-130)GAGK 8 3 0.19465 8919.9 0 0 14323 0 0 8498 0 0 16732 0 0 19547 0 0 8759.7 0 0 19401 0 0 17880 0 0 18711 0 0 106890 0 0 8439 0 0 13544 0 0 8716.3 0 0 16904 0 0 19181 0 0 9451.8 0 0 19736 0 0 20803 0 0 18491 0 0 101060 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 339510000 339510000 0 0 1.4633 1262 789;1805 48;48 48 4747 5063 5395 5998;5999 5395 5998 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22497 5395 5998 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22497 5395 5998 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22497 Q71DI3;Q16695;P68431 29;29;29 Q71DI3 Q71DI3 Histone H3.2;Histone H3.1t;Histone H3.1 HIST2H3A;HIST3H3;HIST1H3A sp|Q71DI3|H32_HUMAN Histone H3.2 OS=Homo sapiens GN=HIST2H3A PE=1 SV=3;sp|Q16695|H31T_HUMAN Histone H3.1t OS=Homo sapiens GN=HIST3H3 PE=1 SV=3;sp|P68431|H31_HUMAN Histone H3.1 OS=Homo sapiens GN=HIST1H3A PE=1 SV=2 0.999999 60.7958 0.000133311 131.83 75.815 131.83 1 S GKAPRKQLATKAARKSAPATGGVKKPHRYRP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPXXXXXXX S(1)APATGGVK S(60.8)APAT(-60.8)GGVK 1 2 0.4795 90384 0 0 181900 0 0 90946 0 0 189030 0 0 83288 0 0 86068 0 0 99176 0 0 128920 0 0 197510 0 0 17240 0 0 85528 0 0 171880 0 0 91481 0 0 192000 0 0 85290 0 0 91436 0 0 102880 0 0 128180 0 0 190710 0 0 19218 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 130090000 130090000 0 0 NaN 1263 790 29 29 2207;3592 2333;3818 2514;4071 2807;4526 4071 4526 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8845 4071 4526 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8845 4071 4526 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8845 Q71DI3;Q16695;P68431;P84243;Q6NXT2 58;58;58;58;57 Q71DI3;P84243 Q71DI3 Histone H3.2;Histone H3.1t;Histone H3.1;Histone H3.3;Histone H3.3C HIST2H3A;HIST3H3;HIST1H3A;H3F3A;H3F3C sp|Q71DI3|H32_HUMAN Histone H3.2 OS=Homo sapiens GN=HIST2H3A PE=1 SV=3;sp|Q16695|H31T_HUMAN Histone H3.1t OS=Homo sapiens GN=HIST3H3 PE=1 SV=3;sp|P68431|H31_HUMAN Histone H3.1 OS=Homo sapiens GN=HIST1H3A PE=1 SV=2;sp|P84243|H33_HUMAN Histone H3.3 OS=Homo s 0.991608 20.7246 0.000912472 124.92 57.753 124.92 1 S RPGTVALREIRRYQKSTELLIRKLPFQRLVR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX S(0.992)T(0.008)ELLIR S(20.72)T(-20.72)ELLIR 1 2 -0.1681 7908 0 0 17801 0 0 8564.3 0 0 18609 0 0 9919.1 0 0 8649.3 0 0 8210.7 0 0 12719 0 0 20123 0 0 3499.4 0 0 7485.4 0 0 16820 0 0 8599.4 0 0 18898 0 0 9973 0 0 9171.8 0 0 8766 0 0 12706 0 0 19350 0 0 3589.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17167000 17167000 0 0 0.90236 1264 790;815 58;58 58 4500;5416 4793;5769 5105 5669 5105 5669 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15902 5105 5669 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15902 5105 5669 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15902 P78312 1144 P78312 P78312 Protein FAM193A FAM193A sp|P78312|F193A_HUMAN Protein FAM193A OS=Homo sapiens GN=FAM193A PE=1 SV=2 1 109.721 0.000209263 109.72 71.7 109.72 1 S SPGEHQQNSKLVLAESPQPKGKNKKNKKKKG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX LVLAES(1)PQPK LVLAES(109.72)PQPK 6 3 -0.06088 6668.7 0 0 7014.1 0 0 6448.9 0 0 7316.9 0 0 6509.8 0 0 6341.2 0 0 6715.7 0 0 6825.4 0 0 7743.2 0 0 2521.7 0 0 6309.5 0 0 6627.7 0 0 6507.4 0 0 7478.6 0 0 6606.4 0 0 6410.5 0 0 6854.2 0 0 6903.6 0 0 7596.7 0 0 2532.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16796000 16796000 0 0 NaN 1265 792 1144 1144 2649 2796 2997 3335 2997 3335 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17037 2997 3335 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17037 2997 3335 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17037 P78314 427 P78314 P78314 SH3 domain-binding protein 2 SH3BP2 sp|P78314|3BP2_HUMAN SH3 domain-binding protein 2 OS=Homo sapiens GN=SH3BP2 PE=1 SV=2 0.94693 12.5147 0.00592554 86.014 53.516 86.014 1 S HLQRSPPDGQSFRSFSFEKPRQPSQADTGGD X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX S(0.053)FS(0.947)FEKPR S(-12.51)FS(12.51)FEKPR 3 3 0.5671 12227 0 0 4857.3 0 0 12170 0 0 4334.4 0 0 9396.3 0 0 12791 0 0 9650.7 0 0 8233.6 0 0 4598.4 0 0 1347 0 0 11570 0 0 4585.5 0 0 12224 0 0 4618.2 0 0 9698 0 0 12389 0 0 9673 0 0 8476.1 0 0 4751.5 0 0 1459 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9268000 9268000 0 0 NaN 1266 793 427 427 3756 3996 4260 4735 4260 4735 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15423 4260 4735 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15423 4260 4735 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15423 P78314 416 P78314 P78314 SH3 domain-binding protein 2 SH3BP2 sp|P78314|3BP2_HUMAN SH3 domain-binding protein 2 OS=Homo sapiens GN=SH3BP2 PE=1 SV=2 0.999998 57.8468 0.00845994 85.729 50.218 85.729 1 S VLPRPEKPQLPHLQRSPPDGQSFRSFSFEKP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(1)PPDGQSFR S(57.85)PPDGQS(-57.85)FR 1 2 -0.39403 19395 0 0 14593 0 0 19747 0 0 15086 0 0 16641 0 0 19301 0 0 15508 0 0 16346 0 0 14974 0 0 6255.8 0 0 18354 0 0 13789 0 0 19824 0 0 15528 0 0 17054 0 0 19133 0 0 15825 0 0 16699 0 0 14798 0 0 6268.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8969200 8969200 0 0 NaN 1267 793 416 416 4136 4409 4700 5216 4700 5216 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9529 4700 5216 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9529 4700 5216 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9529 P78316 96 P78316 P78316 Nucleolar protein 14 NOP14 sp|P78316|NOP14_HUMAN Nucleolar protein 14 OS=Homo sapiens GN=NOP14 PE=1 SV=3 0.999849 38.4893 1.02746E-15 221.44 178.65 70.167 1 S NVFRDKRFGEYNSNMSPEEKMMKRFALEQQR X;X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPXXXXXXXXXXX FGEYNSNMS(1)PEEK FGEY(-50.33)NS(-38.49)NMS(38.49)PEEK 9 3 0.1497 31063 0 0 33131 0 0 34586 0 0 30593 0 0 18483 0 0 34939 0 0 22996 0 0 30341 0 0 35317 0 0 21474 0 0 29407 0 0 31283 0 0 34435 0 0 31637 0 0 19783 0 0 34810 0 0 23529 0 0 31259 0 0 34325 0 0 20922 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 26724000 26724000 0 0 NaN 1268 794 96 96 1263 1328;1329 1430;1431 1587;1588 1430 1587 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13831 1431 1588 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15622 1431 1588 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15622 P78332 891 P78332 P78332 RNA-binding protein 6 RBM6 sp|P78332|RBM6_HUMAN RNA-binding protein 6 OS=Homo sapiens GN=RBM6 PE=1 SV=5 1 102.661 0.000458805 102.66 73.685 102.66 1 S DVFKKPLPPTVKKEESPPPPKVVNPLIGLLG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX KEES(1)PPPPK KEES(102.66)PPPPK 4 3 0.22979 28097 0 0 26587 0 0 28764 0 0 29589 0 0 33609 0 0 28443 0 0 31917 0 0 27067 0 0 29932 0 0 2993.4 0 0 26589 0 0 25133 0 0 28982 0 0 30180 0 0 33795 0 0 28549 0 0 32515 0 0 27294 0 0 29618 0 0 3445.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 48024000 48024000 0 0 NaN 1269 795 891 891 2040 2159 2326 2593 2326 2593 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8367 2326 2593 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8367 2326 2593 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8367 P78332 1025 P78332 P78332 RNA-binding protein 6 RBM6 sp|P78332|RBM6_HUMAN RNA-binding protein 6 OS=Homo sapiens GN=RBM6 PE=1 SV=5 0.999966 44.6736 9.01379E-05 134.21 104.67 134.21 1 S KGRGNDRREKLQSFDSPERKRIKYSRETDSD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX LQSFDS(1)PER LQS(-44.67)FDS(44.67)PER 6 2 0.68868 27992 0 0 30023 0 0 25074 0 0 28509 0 0 18919 0 0 24836 0 0 18857 0 0 23920 0 0 28497 0 0 8345 0 0 26477 0 0 28353 0 0 25340 0 0 29305 0 0 19571 0 0 25063 0 0 19461 0 0 24280 0 0 27710 0 0 8411.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 33831000 33831000 0 0 NaN 1270 795 1025 1025 2530 2673 2869 3201 2869 3201 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13849 2869 3201 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13849 2869 3201 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13849 P78344 395 P78344 P78344 Eukaryotic translation initiation factor 4 gamma 2 EIF4G2 sp|P78344|IF4G2_HUMAN Eukaryotic translation initiation factor 4 gamma 2 OS=Homo sapiens GN=EIF4G2 PE=1 SV=1 0.963162 14.174 5.66931E-06 172.25 128.8 172.25 1 S GSGIGTGPGVIQDRFSPTMGRHRSNQLFNGH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPXXXXXXXXXX FS(0.963)PT(0.037)MGR FS(14.17)PT(-14.17)MGR 2 2 -0.58501 50993 0 0 52633 0 0 50254 0 0 46174 0 0 47857 0 0 50025 0 0 45755 0 0 47864 0 0 52339 0 0 245.82 0 0 48250 0 0 49684 0 0 50612 0 0 47866 0 0 48684 0 0 49944 0 0 46856 0 0 48102 0 0 51363 0 0 1339.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 115600000 115600000 0 0 NaN 1271 796 395 395 1325 1398 1505 1667 1505 1667 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13407 1505 1667 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13407 1505 1667 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13407 P78345 12 P78345 P78345 Ribonuclease P protein subunit p38 RPP38 sp|P78345|RPP38_HUMAN Ribonuclease P protein subunit p38 OS=Homo sapiens GN=RPP38 PE=1 SV=2 1 93.8124 1.77662E-05 93.812 77.922 93.812 1 S ____MAAAPQAPGRGSLRKTRPLVVKTSLNN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPXXXXXXXXXXXX AAAPQAPGRGS(1)LRK AAAPQAPGRGS(93.81)LRK 11 3 0.15812 15041 0 0 17431 0 0 14317 0 0 17964 0 0 19305 0 0 12815 0 0 14667 0 0 15348 0 0 16983 0 0 2825.2 0 0 14230 0 0 16470 0 0 14510 0 0 18330 0 0 19233 0 0 13112 0 0 15216 0 0 15382 0 0 16659 0 0 3015.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 75194000 75194000 0 0 NaN 1272 797 12 12 9 10 13 20 13 20 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8720 13 20 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8720 13 20 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8720 P78347 823 P78347 P78347 General transcription factor II-I GTF2I sp|P78347|GTF2I_HUMAN General transcription factor II-I OS=Homo sapiens GN=GTF2I PE=1 SV=2 0.700534 5.97876 0.0245077 54.023 42.872 54.023 1 S PEMFETAIKESTSSKSPPRKINSSPNVNTTA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX ES(0.041)T(0.041)S(0.041)S(0.177)KS(0.701)PPR ES(-12.34)T(-12.34)S(-12.34)S(-5.98)KS(5.98)PPR 7 3 0.29699 20601 0 0 18544 0 0 20056 0 0 17782 0 0 20230 0 0 20609 0 0 20215 0 0 20628 0 0 20532 0 0 4666.1 0 0 19492 0 0 17513 0 0 20229 0 0 18350 0 0 20519 0 0 20540 0 0 20587 0 0 20831 0 0 20246 0 0 4871.1 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 350140000 350140000 0 0 NaN 1273 798 823 823 1173 1234 1332 1473;1474 1332 1473 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6100 1332 1473 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6100 1332 1473 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6100 P78347 831 P78347 P78347 General transcription factor II-I GTF2I sp|P78347|GTF2I_HUMAN General transcription factor II-I OS=Homo sapiens GN=GTF2I PE=1 SV=2 0.820081 6.58784 2.05022E-57 383.79 365.05 383.79 1 S KESTSSKSPPRKINSSPNVNTTASGVEDLNI X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP KINS(0.18)S(0.82)PNVNTTASGVEDLNIIQVTIPDDDNER KINS(-6.59)S(6.59)PNVNT(-56.58)T(-82.67)AS(-125.76)GVEDLNIIQVT(-339.86)IPDDDNER 5 4 0.14483 3510.2 0 0 12066 0 0 3180.5 0 0 10787 0 0 3890.2 0 0 1906.9 0 0 3668.6 0 0 9745.3 0 0 14385 0 0 152480 0 0 3320.3 0 0 11391 0 0 3229.8 0 0 11011 0 0 3912.9 0 0 2693.2 0 0 4038.4 0 0 14066 0 0 13740 0 0 143800 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 329110000 329110000 0 0 NaN 1274 798 831 831 2093 2214 2383;2384 2655;2656;2657 2384 2657 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21861 2384 2657 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21861 2384 2657 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21861 P78347 674 P78347 P78347 General transcription factor II-I GTF2I sp|P78347|GTF2I_HUMAN General transcription factor II-I OS=Homo sapiens GN=GTF2I PE=1 SV=2 0.999815 37.3366 0.000235331 118.52 95.881 118.52 1 S SKINTKALQSPKRPRSPGSNSKVPEIEVTVE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX RPRS(1)PGSNSK RPRS(37.34)PGS(-37.34)NS(-63.23)K 4 3 -0.15556 12701 0 0 13515 0 0 14282 0 0 13275 0 0 22324 0 0 13512 0 0 21171 0 0 17277 0 0 13879 0 0 1714.3 0 0 12024 0 0 12765 0 0 14386 0 0 13649 0 0 22156 0 0 13584 0 0 21406 0 0 17236 0 0 14004 0 0 2014.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 56061000 56061000 0 0 NaN 1275 798 674 674 3403 3615 3856 4281 3856 4281 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5101 3856 4281 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5101 3856 4281 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5101 P78347 210 P78347 P78347 General transcription factor II-I GTF2I sp|P78347|GTF2I_HUMAN General transcription factor II-I OS=Homo sapiens GN=GTF2I PE=1 SV=2 0.975729 17.6068 3.26571E-07 157.33 128.36 157.33 1 S VGGRVMVTDADRSILSPGGSCGPIKVKTEPT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX S(0.007)ILS(0.976)PGGS(0.017)CGPIK S(-21.24)ILS(17.61)PGGS(-17.61)CGPIK 4 3 0.17349 6835.4 0 0 7946.1 0 0 7879.2 0 0 7499.8 0 0 6142.6 0 0 6671.4 0 0 6981.7 0 0 7570.6 0 0 8138 0 0 8541.1 0 0 6472 0 0 7503.9 0 0 7854.2 0 0 7714.4 0 0 6349.1 0 0 6751.4 0 0 7098.1 0 0 7816.4 0 0 7980.7 0 0 8217.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 41512000 41512000 0 0 NaN 1276 798 210 210 3848 4101 4376 4867 4376 4867 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17756 4376 4867 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17756 4376 4867 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17756 P78362 8 P78362 P78362 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal SRPK2 sp|P78362|SRPK2_HUMAN SRSF protein kinase 2 OS=Homo sapiens GN=SRPK2 PE=1 SV=3 0.413131 1.163 0.00976806 71.692 54.41 71.692 S ________MSVNSEKSSSSERPEPQQKAPLV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(0.413)S(0.316)S(0.263)S(0.008)ERPEPQQK S(1.16)S(-1.16)S(-1.96)S(-17.19)ERPEPQQK 1 3 -0.6527 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1277 799 8 8 4463 4754 5059 5614 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6251 5059 5614 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6251 5059 5614 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6251 P78371 3 P78371 P78371 T-complex protein 1 subunit beta CCT2 sp|P78371|TCPB_HUMAN T-complex protein 1 subunit beta OS=Homo sapiens GN=CCT2 PE=1 SV=4 0.82441 6.71643 4.92824E-05 56.432 34.284 56.432 1 S _____________MASLSLAPVNIFKAGADE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPXXXXX AS(0.824)LS(0.176)LAPVNIFK AS(6.72)LS(-6.72)LAPVNIFK 2 2 -1.7434 4933.8 0 0 6158.4 0 0 5232.6 0 0 5571 0 0 5086.3 0 0 5934.2 0 0 5081 0 0 6402.6 0 0 6669.9 0 0 12271 0 0 4669.7 0 0 5814.3 0 0 5250 0 0 5761.8 0 0 5171.7 0 0 5961 0 0 5215.8 0 0 6773.9 0 0 6513.8 0 0 11703 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7844600 7844600 0 0 NaN 1278 800 3 3 475 505 544 608 544 608 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24388 544 608 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24388 544 608 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24388 P78371 260 P78371 P78371 T-complex protein 1 subunit beta CCT2 sp|P78371|TCPB_HUMAN T-complex protein 1 subunit beta OS=Homo sapiens GN=CCT2 PE=1 SV=4 0.794415 5.87055 0.0120447 67.214 47.453 67.214 1 S DTDKIKIFGSRVRVDSTAKVAEIEHAEKEKM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX VRVDS(0.794)T(0.206)AK VRVDS(5.87)T(-5.87)AK 5 3 0.037851 40760 0 0 15885 0 0 43947 0 0 17414 0 0 17349 0 0 41871 0 0 18940 0 0 25212 0 0 18219 0 0 2715 0 0 38582 0 0 15015 0 0 43746 0 0 18180 0 0 19198 0 0 40674 0 0 19183 0 0 26017 0 0 18008 0 0 3140 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24849000 24849000 0 0 NaN 1279 800 260 260 5236 5581 5949 6613 5949 6613 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8728 5949 6613 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8728 5949 6613 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8728 P78395 9 P78395 P78395 Melanoma antigen preferentially expressed in tumors PRAME sp|P78395|PRAME_HUMAN Melanoma antigen preferentially expressed in tumors OS=Homo sapiens GN=PRAME PE=1 SV=1 0.94545 12.3885 0.0119925 82.417 53.172 82.417 1 S _______MERRRLWGSIQSRYISMSVWTSPR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX LWGS(0.945)IQS(0.055)R LWGS(12.39)IQS(-12.39)R 4 2 -0.29995 4724.1 0 0 14613 0 0 6598.7 0 0 15306 0 0 7329 0 0 5346.5 0 0 7528.3 0 0 8242.5 0 0 16003 0 0 9714 0 0 4477.3 0 0 13808 0 0 6546.1 0 0 15513 0 0 7405.2 0 0 5858.2 0 0 7885.7 0 0 8448.3 0 0 15431 0 0 9337.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9043100 9043100 0 0 NaN 1280 801 9 9 2654 2801 3002 3340 3002 3340 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17436 3002 3340 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17436 3002 3340 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17436 P78414 447 P78414 P78414 Iroquois-class homeodomain protein IRX-1 IRX1 sp|P78414|IRX1_HUMAN Iroquois-class homeodomain protein IRX-1 OS=Homo sapiens GN=IRX1 PE=1 SV=3 1 127.174 5.78468E-05 127.17 85.796 127.17 1 S SSPTLPERDLVPRPDSPAQQLKSPFQPVRDN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPXXXXXXXXX DLVPRPDS(1)PAQQLK DLVPRPDS(127.17)PAQQLK 8 3 -0.80633 7036.2 0 0 6307.3 0 0 6524.8 0 0 7407.4 0 0 23536 0 0 6954 0 0 26938 0 0 12939 0 0 6874.3 0 0 6698.6 0 0 6656.1 0 0 5964.5 0 0 6814.2 0 0 7531.3 0 0 22909 0 0 7078.2 0 0 26708 0 0 12949 0 0 7633.8 0 0 6607 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18518000 18518000 0 0 NaN 1281 802 447 447 751 795 846 933 846 933 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15052 846 933 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15052 846 933 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15052 P78527 4026 P78527 P78527 DNA-dependent protein kinase catalytic subunit PRKDC sp|P78527|PRKDC_HUMAN DNA-dependent protein kinase catalytic subunit OS=Homo sapiens GN=PRKDC PE=1 SV=3 1 145.751 8.29969E-07 145.75 98.66 145.75 1 S FDWKNFEQKMLKKGGSWIQEINVAEKNWYPR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX KGGS(1)WIQEINVAEK KGGS(145.75)WIQEINVAEK 4 3 0.42119 8105.9 0 0 7241.4 0 0 8401.6 0 0 7039.3 0 0 10079 0 0 7149.6 0 0 11692 0 0 8823.5 0 0 7488.3 0 0 19073 0 0 7671.4 0 0 6839.5 0 0 8466.5 0 0 7241.8 0 0 10148 0 0 7218.4 0 0 11709 0 0 9360.5 0 0 7567 0 0 18164 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12934000 12934000 0 0 NaN 1282 803 4026 4026 2067 2187 2355 2625 2355 2625 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19851 2355 2625 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19851 2355 2625 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19851 P78527 2612 P78527 P78527 DNA-dependent protein kinase catalytic subunit PRKDC sp|P78527|PRKDC_HUMAN DNA-dependent protein kinase catalytic subunit OS=Homo sapiens GN=PRKDC PE=1 SV=3 0.995488 23.5431 7.82588E-12 203.33 185.74 203.33 1 S FRSTVLTPMFVETQASQGTLQTRTQEGSLSA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPPPXXXXXXXX STVLTPMFVETQAS(0.995)QGT(0.004)LQTR S(-161.01)T(-161.01)VLT(-148.73)PMFVET(-72.01)QAS(23.54)QGT(-23.54)LQT(-39.59)R 14 3 0.16143 4124.8 0 0 3460.4 0 0 4016.3 0 0 3724.3 0 0 5064.9 0 0 4235.8 0 0 3369.8 0 0 4907.6 0 0 4442.5 0 0 18004 0 0 3902.8 0 0 3270.4 0 0 4060.1 0 0 3816.1 0 0 5055 0 0 4265.3 0 0 3541 0 0 5439.1 0 0 4337.9 0 0 17066 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30332000 30332000 0 0 NaN 1283 803 2612 2612 4541 4843 5160 5730 5160 5730 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21499 5160 5730 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21499 5160 5730 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21499 P78536 791 P78536 P78536 Disintegrin and metalloproteinase domain-containing protein 17 ADAM17 sp|P78536|ADA17_HUMAN Disintegrin and metalloproteinase domain-containing protein 17 OS=Homo sapiens GN=ADAM17 PE=1 SV=1 0.999926 41.3289 0.000146152 102.83 76.234 102.83 1 S GFEKDPFPNSSTAAKSFEDLTDHPVTRSEKA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(1)FEDLTDHPVTR S(41.33)FEDLT(-41.33)DHPVT(-82.99)R 1 3 3.1342 8357.3 0 0 7970.6 0 0 9356.5 0 0 8011.2 0 0 8690 0 0 8642.8 0 0 8195.5 0 0 6896.8 0 0 7487.2 0 0 2529.8 0 0 7911.9 0 0 7529.8 0 0 9355 0 0 8233.4 0 0 8850.3 0 0 8617.8 0 0 8346.7 0 0 7061.9 0 0 7417.7 0 0 2541.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14005000 14005000 0 0 NaN 1284 804 791 791 3736 3976 4240 4713 4240 4713 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14337 4240 4713 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14337 4240 4713 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14337 P78549 53 P78549 P78549 Endonuclease III-like protein 1 NTHL1 sp|P78549|NTH_HUMAN Endonuclease III-like protein 1 OS=Homo sapiens GN=NTHL1 PE=1 SV=2 0.987345 18.922 0.0207163 61.165 24.053 61.165 1 S PLRRREAAAEARKSHSPVKRPRKAQRLRVAY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX KS(0.013)HS(0.987)PVK KS(-18.92)HS(18.92)PVK 4 3 -0.33212 25943 0 0 19443 0 0 25172 0 0 18947 0 0 19245 0 0 28079 0 0 20665 0 0 20685 0 0 22674 0 0 3650.3 0 0 24546 0 0 18364 0 0 25321 0 0 19631 0 0 19902 0 0 27652 0 0 21023 0 0 21145 0 0 22288 0 0 3915.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27684000 27684000 0 0 NaN 1285 805 53 53 2212 2338 2519 2812 2519 2812 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6266 2519 2812 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6266 2519 2812 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6266 P78559 2617 P78559 P78559 Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 MAP1A sp|P78559|MAP1A_HUMAN Microtubule-associated protein 1A OS=Homo sapiens GN=MAP1A PE=1 SV=6 1 60.305 0.0269633 60.305 45.611 60.305 1 S QGRVGRRAPGKAKPASPARRLDLRGKRSPTP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX AKPAS(1)PAR AKPAS(60.31)PAR 5 2 -0.61462 6234.6 0 0 21419 0 0 5824 0 0 21659 0 0 6714.9 0 0 5986 0 0 5540 0 0 12711 0 0 25438 0 0 8591.7 0 0 5898 0 0 20235 0 0 5896.7 0 0 21973 0 0 6763.9 0 0 6800.1 0 0 6240.5 0 0 12748 0 0 24255 0 0 8384.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13715000 13715000 0 0 NaN 1286 806 2617 2617 270 291 312 347 312 347 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6000 312 347 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6000 312 347 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6000 P78559 2022 P78559 P78559 Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 MAP1A sp|P78559|MAP1A_HUMAN Microtubule-associated protein 1A OS=Homo sapiens GN=MAP1A PE=1 SV=6 0.999994 52.1542 0.000285704 112.84 35.17 112.84 1 S AGRNTSAEKELSSPISPKSLQSDTPTFSYAA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX ELSSPIS(1)PK ELS(-74.88)S(-52.15)PIS(52.15)PK 7 3 -0.23259 4832.9 0 0 16041 0 0 4628.7 0 0 15837 0 0 5251.4 0 0 5205.9 0 0 5048.4 0 0 8344.2 0 0 16232 0 0 1128.7 0 0 4572.4 0 0 15152 0 0 4679.8 0 0 16103 0 0 5300 0 0 5734.1 0 0 5454.9 0 0 8282.2 0 0 15542 0 0 1255.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18078000 18078000 0 0 NaN 1287 806 2022 2022 1056 1112 1200 1319 1200 1319 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15061 1200 1319 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15061 1200 1319 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15061 P78559 1218 P78559 P78559 Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 MAP1A sp|P78559|MAP1A_HUMAN Microtubule-associated protein 1A OS=Homo sapiens GN=MAP1A PE=1 SV=6 0.996924 25.1072 1.56078E-31 307.48 251 307.48 1 S SPSKETSLDVSSKQLSPESLGTLQFGELNLG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP QLS(0.997)PES(0.003)LGTLQFGELNLGK QLS(25.11)PES(-25.11)LGT(-105.05)LQFGELNLGK 3 3 -0.010424 5462.2 0 0 41558 0 0 7298 0 0 42054 0 0 8486.6 0 0 4490.2 0 0 9483.8 0 0 17504 0 0 46238 0 0 35289 0 0 5175.5 0 0 39261 0 0 7259.5 0 0 42546 0 0 8590.8 0 0 6407 0 0 10612 0 0 18117 0 0 44064 0 0 33634 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 90609000 90609000 0 0 NaN 1288 806 1218 1218 3077 3263 3491 3867 3491 3867 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23661 3491 3867 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23661 3491 3867 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23661 P78559 1172 P78559 P78559 Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 MAP1A sp|P78559|MAP1A_HUMAN Microtubule-associated protein 1A OS=Homo sapiens GN=MAP1A PE=1 SV=6 0.982243 17.4284 3.82396E-05 129.38 108.43 129.38 1 S SVPSPDTANQEPTPKSPCGLTEQYLHKDRWP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(0.982)PCGLT(0.018)EQYLHK S(17.43)PCGLT(-17.43)EQY(-83.47)LHK 1 3 -1.9714 5458.9 0 0 18499 0 0 6734.8 0 0 15937 0 0 5466.3 0 0 6984.5 0 0 5328.7 0 0 9523.5 0 0 18456 0 0 6128.1 0 0 5170.3 0 0 17461 0 0 6692.5 0 0 16376 0 0 5632.5 0 0 7443.9 0 0 5790.3 0 0 9639 0 0 17654 0 0 5990.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 33156000 33156000 0 0 NaN 1289 806 1172 1172 4079 4349 4639 5152 4639 5152 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16822 4639 5152 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16822 4639 5152 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16822 P78559 1069 P78559 P78559 Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 MAP1A sp|P78559|MAP1A_HUMAN Microtubule-associated protein 1A OS=Homo sapiens GN=MAP1A PE=1 SV=6 1 140.345 2.69612E-18 239 224.46 239 1 S EEGTLEKEEKVPPPRSPQAQEAPVNIDEGLT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP VPPPRS(1)PQAQEAPVNIDEGLTGCTIQLLPAQDK VPPPRS(140.34)PQAQEAPVNIDEGLT(-140.34)GCT(-186.8)IQLLPAQDK 6 4 -0.42853 2803.9 0 0 16645 0 0 2497.1 0 0 17887 0 0 5157.6 0 0 4610.3 0 0 5379.4 0 0 9740.3 0 0 18522 0 0 73327 0 0 2652 0 0 15731 0 0 2565.1 0 0 18077 0 0 5092.4 0 0 5416.1 0 0 5825 0 0 11781 0 0 17718 0 0 69272 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 30089000 30089000 0 0 NaN 1290 806 1069 1069 5208 5552 5916 6573;6574 5916 6573 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21755 5916 6573 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21755 5916 6573 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21755 P82094 399 P82094 P82094 TATA element modulatory factor TMF1 sp|P82094|TMF1_HUMAN TATA element modulatory factor OS=Homo sapiens GN=TMF1 PE=1 SV=2 0.538423 0.668798 1.91053E-07 144.55 134.43 144.55 1 S LVIPTEEAEMEESGRSATPVNCEQPDILVSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.538)AT(0.462)PVNCEQPDILVSSTPINEGQTVLDK S(0.67)AT(-0.67)PVNCEQPDILVS(-87.25)S(-94.05)T(-100.62)PINEGQT(-128.66)VLDK 1 3 -0.9245 10341 0 0 9766.1 0 0 10976 0 0 10271 0 0 6974.7 0 0 11741 0 0 8564.5 0 0 10452 0 0 11748 0 0 39524 0 0 9787.3 0 0 9228.6 0 0 10970 0 0 10539 0 0 7339.7 0 0 11761 0 0 8728.8 0 0 11725 0 0 11456 0 0 37458 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 36855000 36855000 0 0 NaN 1291 807 399 399 3633 3862 4115;4116 4572;4573 4116 4573 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21520 4116 4573 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21520 4116 4573 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21520 P83369 15 P83369 P83369 U7 snRNA-associated Sm-like protein LSm11 LSM11 sp|P83369|LSM11_HUMAN U7 snRNA-associated Sm-like protein LSm11 OS=Homo sapiens GN=LSM11 PE=1 SV=2 0.580182 1.40433 0.0513156 43.116 20.884 43.116 2 S _MEERERGARSAGAGSPARPPSPRLDVSSDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPXXXXXXX S(0.42)AGAGS(0.58)PARPPS(1)PR S(-1.4)AGAGS(1.4)PARPPS(37.91)PR 6 3 0.13795 0 11701 0 0 8301.5 0 0 10802 0 0 7590.9 0 0 8397.7 0 0 10859 0 0 8639.4 0 0 8374.4 0 0 8130.3 0 0 2714.5 0 0 11069 0 0 7838.1 0 0 10900 0 0 7890 0 0 8666.9 0 0 10712 0 0 8768.6 0 0 8578.2 0 0 8043.7 0 0 2749.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 5636300 0 5636300 0 NaN 1292 808 15 15 3580 3803 4056 4511 4056 4511 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6517 4056 4511 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6517 4056 4511 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6517 P83369 21 P83369 P83369 U7 snRNA-associated Sm-like protein LSm11 LSM11 sp|P83369|LSM11_HUMAN U7 snRNA-associated Sm-like protein LSm11 OS=Homo sapiens GN=LSM11 PE=1 SV=2 0.999906 37.9059 0.0513156 43.116 20.884 43.116 2 S RGARSAGAGSPARPPSPRLDVSSDSFDPLLA X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPXXXXXXXXXXXXX S(0.42)AGAGS(0.58)PARPPS(1)PR S(-1.4)AGAGS(1.4)PARPPS(37.91)PR 12 3 0.13795 0 11701 0 0 8301.5 0 0 10802 0 0 7590.9 0 0 8397.7 0 0 10859 0 0 8639.4 0 0 8374.4 0 0 8130.3 0 0 2714.5 0 0 11069 0 0 7838.1 0 0 10900 0 0 7890 0 0 8666.9 0 0 10712 0 0 8768.6 0 0 8578.2 0 0 8043.7 0 0 2749.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 5636300 0 5636300 0 NaN 1293 808 21 21 3580 3803 4056 4511 4056 4511 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6517 4056 4511 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6517 4056 4511 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6517 P83436 506 P83436 P83436 Conserved oligomeric Golgi complex subunit 7 COG7 sp|P83436|COG7_HUMAN Conserved oligomeric Golgi complex subunit 7 OS=Homo sapiens GN=COG7 PE=1 SV=1 0.997375 26.3277 0.000643579 103.69 76.308 103.69 1 S NRILSTAGKYLSDSCSPRSLAGFQESILTDK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX YLSDS(0.002)CS(0.997)PR Y(-84.17)LS(-35.2)DS(-26.33)CS(26.33)PR 7 2 0.059156 20685 0 0 24339 0 0 23243 0 0 25990 0 0 16904 0 0 22723 0 0 17551 0 0 22355 0 0 25233 0 0 6552.4 0 0 19582 0 0 23002 0 0 23181 0 0 26532 0 0 17545 0 0 22930 0 0 18045 0 0 22636 0 0 24571 0 0 6687.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9777500 9777500 0 0 NaN 1294 809 506 506 5396 5748 6135 6822 6135 6822 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10323 6135 6822 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10323 6135 6822 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10323 P84098 12 P84098 P84098 60S ribosomal protein L19 RPL19 sp|P84098|RL19_HUMAN 60S ribosomal protein L19 OS=Homo sapiens GN=RPL19 PE=1 SV=1 0.5 0 0.0198418 71.379 6.1273 71.379 1 S ____MSMLRLQKRLASSVLRCGKKKVWLDPN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX LAS(0.5)S(0.5)VLR LAS(0)S(0)VLR 3 2 1.1217 12560 0 0 12323 0 0 13731 0 0 11004 0 0 12735 0 0 12703 0 0 8827.4 0 0 10890 0 0 12711 0 0 1787.4 0 0 11890 0 0 11634 0 0 13739 0 0 11407 0 0 12931 0 0 12637 0 0 9279.5 0 0 11048 0 0 12377 0 0 1935.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8909900 8909900 0 0 NaN 1295 812 12 12 2299 2428 2617 2925 2617 2925 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14678 2617 2925 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14678 2617 2925 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14678 P84098 13 P84098 P84098 60S ribosomal protein L19 RPL19 sp|P84098|RL19_HUMAN 60S ribosomal protein L19 OS=Homo sapiens GN=RPL19 PE=1 SV=1 0.5 0 0.0198418 71.379 6.1273 71.379 1 S ___MSMLRLQKRLASSVLRCGKKKVWLDPNE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LAS(0.5)S(0.5)VLR LAS(0)S(0)VLR 4 2 1.1217 12560 0 0 12323 0 0 13731 0 0 11004 0 0 12735 0 0 12703 0 0 8827.4 0 0 10890 0 0 12711 0 0 1787.4 0 0 11890 0 0 11634 0 0 13739 0 0 11407 0 0 12931 0 0 12637 0 0 9279.5 0 0 11048 0 0 12377 0 0 1935.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8909900 8909900 0 0 NaN 1296 812 13 13 2299 2428 2617 2925 2617 2925 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14678 2617 2925 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14678 2617 2925 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14678 P84098 189 P84098 P84098 60S ribosomal protein L19 RPL19 sp|P84098|RL19_HUMAN 60S ribosomal protein L19 OS=Homo sapiens GN=RPL19 PE=1 SV=1 0.978037 16.4954 0.0178456 65.805 44.554 65.805 1 S EERLQAKKEEIIKTLSKEEETKK________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX T(0.022)LS(0.978)KEEETKK T(-16.5)LS(16.5)KEEET(-43.48)KK 3 3 0.27752 38251 0 0 22505 0 0 42493 0 0 21531 0 0 18358 0 0 44363 0 0 15928 0 0 28483 0 0 26931 0 0 8823.8 0 0 36212 0 0 21254 0 0 42244 0 0 22534 0 0 20030 0 0 43266 0 0 16632 0 0 29452 0 0 26106 0 0 8967.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21091000 21091000 0 0 NaN 1297 812 189 189 4789 5107 5441 6052 5441 6052 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10590 5441 6052 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10590 5441 6052 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10590 P84101 21 P84101 P84101 Small EDRK-rich factor 2 SERF2 sp|P84101|SERF2_HUMAN Small EDRK-rich factor 2 OS=Homo sapiens GN=SERF2 PE=1 SV=1 0.989694 19.8243 0.00784019 86.014 39.195 86.014 1 S QRELARQKNMKKQSDSVKGKRRDDGLSAAAR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX KQS(0.01)DS(0.99)VK KQS(-19.82)DS(19.82)VK 5 3 0.22749 105840 0 0 70256 0 0 103120 0 0 75727 0 0 63466 0 0 102620 0 0 65999 0 0 79798 0 0 77011 0 0 9345.8 0 0 100140 0 0 66400 0 0 103510 0 0 77852 0 0 66793 0 0 101400 0 0 67362 0 0 81210 0 0 75520 0 0 10647 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 171300000 171300000 0 0 NaN 1298 813 21 21 2184;2185;3133 2308;2309;3324 2485;2486;3554 2765;2766;3939 2485 2765 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7373 2485 2765 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7373 2485 2765 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7373 P84103 138 P84103 P84103 Serine/arginine-rich splicing factor 3 SRSF3 sp|P84103|SRSF3_HUMAN Serine/arginine-rich splicing factor 3 OS=Homo sapiens GN=SRSF3 PE=1 SV=1 1 45.3574 0.0441713 45.357 23.415 45.357 2 S RSRSRSLSRDRRRERSLSRERNHKPSRSFSR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX ERS(1)LS(1)RER ERS(45.36)LS(45.36)RER 3 3 0.2546 0 8805.5 0 0 9350.5 0 0 9544.4 0 0 8983.1 0 0 10033 0 0 9964.7 0 0 11415 0 0 7221.8 0 0 11108 0 0 3419.3 0 0 8335 0 0 8831 0 0 9576.7 0 0 9261.7 0 0 10172 0 0 9916.4 0 0 11545 0 0 7453.3 0 0 10973 0 0 3386.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 52106000 0 52106000 0 NaN 1299 814 138 138 1133 1192 1282 1409 1282 1409 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5504 1282 1409 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5504 1282 1409 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5504 P84103 140 P84103 P84103 Serine/arginine-rich splicing factor 3 SRSF3 sp|P84103|SRSF3_HUMAN Serine/arginine-rich splicing factor 3 OS=Homo sapiens GN=SRSF3 PE=1 SV=1 1 45.3574 0.0441713 45.357 23.415 45.357 2 S RSRSLSRDRRRERSLSRERNHKPSRSFSRSR X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX ERS(1)LS(1)RER ERS(45.36)LS(45.36)RER 5 3 0.2546 0 8805.5 0 0 9350.5 0 0 9544.4 0 0 8983.1 0 0 10033 0 0 9964.7 0 0 11415 0 0 7221.8 0 0 11108 0 0 3419.3 0 0 8335 0 0 8831 0 0 9576.7 0 0 9261.7 0 0 10172 0 0 9916.4 0 0 11545 0 0 7453.3 0 0 10973 0 0 3386.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 52106000 0 52106000 0 NaN 1300 814 140 140 1133 1192 1282 1409 1282 1409 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5504 1282 1409 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5504 1282 1409 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5504 P84103 5 P84103 P84103 Serine/arginine-rich splicing factor 3 SRSF3 sp|P84103|SRSF3_HUMAN Serine/arginine-rich splicing factor 3 OS=Homo sapiens GN=SRSF3 PE=1 SV=1 1 56.1471 6.6014E-05 56.147 26.819 56.147 1 S ___________MHRDSCPLDCKVYVGNLGNN X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX MHRDS(1)CPLDCK MHRDS(56.15)CPLDCK 5 3 0.58927 29079 0 0 32951 0 0 31976 0 0 33042 0 0 38035 0 0 31890 0 0 36103 0 0 32210 0 0 34451 0 0 12794 0 0 27527 0 0 31128 0 0 32102 0 0 33902 0 0 38211 0 0 32044 0 0 36797 0 0 32682 0 0 34063 0 0 12792 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 53552000 53552000 0 0 NaN 1301 814 5 5 2706 2869;2870 3078;3079 3425;3426 3079 3426 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10255 3079 3426 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10255 3079 3426 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10255 P84103 108 P84103 P84103 Serine/arginine-rich splicing factor 3 SRSF3 sp|P84103|SRSF3_HUMAN Serine/arginine-rich splicing factor 3 OS=Homo sapiens GN=SRSF3 PE=1 SV=1 1 89.6086 0.00886798 89.609 38.121 89.609 1 S PPSWGRRPRDDYRRRSPPPRRRSPRRRSFSR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX RRS(1)PPPR RRS(89.61)PPPR 3 3 -0.0831 29608 0 0 28789 0 0 28489 0 0 30377 0 0 28339 0 0 28985 0 0 28521 0 0 29664 0 0 31549 0 0 26093 0 0 28012 0 0 27205 0 0 28750 0 0 31071 0 0 28773 0 0 29173 0 0 29106 0 0 30515 0 0 31001 0 0 25256 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 132900000 132900000 0 0 NaN 1302 814 108 108 3448 3662 3905 4335;4336;4337 3905 4336 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4238 3905 4336 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4238 3905 4336 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4238 P84243 29 P84243 P84243 Histone H3.3 H3F3A sp|P84243|H33_HUMAN Histone H3.3 OS=Homo sapiens GN=H3F3A PE=1 SV=2 0.999704 36.3871 0.00456255 93.561 29.264 93.561 1 S GKAPRKQLATKAARKSAPSTGGVKKPHRYRP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(1)APSTGGVK S(36.39)APS(-36.39)T(-41.8)GGVK 1 2 0.070513 17549 0 0 34736 0 0 16461 0 0 33285 0 0 18968 0 0 18028 0 0 18142 0 0 24898 0 0 33327 0 0 7503 0 0 16602 0 0 32806 0 0 16667 0 0 34019 0 0 19103 0 0 18851 0 0 18923 0 0 24935 0 0 32239 0 0 7641.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15060000 15060000 0 0 NaN 1303 815 29 29 3594 3821 4074 4529 4074 4529 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8669 4074 4529 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8669 4074 4529 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8669 P85037 213 P85037 P85037 Forkhead box protein K1 FOXK1 sp|P85037|FOXK1_HUMAN Forkhead box protein K1 OS=Homo sapiens GN=FOXK1 PE=1 SV=1 1 88.1482 7.32247E-08 162.71 136.88 162.71 1;2 S KIQFTSLYHKEEAPASPLRPLYPQISPLKIH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPXX EEAPAS(1)PLRPLYPQISPLK EEAPAS(88.15)PLRPLY(-102.37)PQIS(-88.15)PLK 6 3 0.012303 11429 7189.4 0 13701 10580 0 11223 9117.7 0 13122 9929.5 0 10141 4965.7 0 13272 8264.4 0 11282 6918.5 0 13484 9895.7 0 14076 11407 0 21276 25064 0 10814 6810.2 0 12940 9990.5 0 11302 9023 0 13511 10208 0 10374 5316.2 0 13339 8425.8 0 11505 7071.6 0 14158 10618 0 13770 11065 0 20346 23830 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 74341000 50676000 23665000 0 NaN 1304 816 213 213 916 969;970 1051;1052 1160;1161 1051 1160 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20871 1051 1160 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20871 1051 1160 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20871 P85037 223 P85037 P85037 Forkhead box protein K1 FOXK1 sp|P85037|FOXK1_HUMAN Forkhead box protein K1 OS=Homo sapiens GN=FOXK1 PE=1 SV=1 0.999986 49.0366 1.42564E-07 150.09 106.79 150.09 1;2 S EEAPASPLRPLYPQISPLKIHIPEPDLRSMV X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX EEAPASPLRPLYPQIS(1)PLK EEAPAS(-57.14)PLRPLY(-49.04)PQIS(49.04)PLK 16 3 -0.015475 15017 7189.4 0 22175 10580 0 16422 9117.7 0 23146 9929.5 0 10697 4965.7 0 16726 8264.4 0 12863 6918.5 0 18784 9895.7 0 21918 11407 0 22755 25064 0 14215 6810.2 0 20953 9990.5 0 16390 9023 0 23603 10208 0 11232 5316.2 0 17120 8425.8 0 13237 7071.6 0 19448 10618 0 21242 11065 0 21862 23830 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 45232000 21567000 23665000 0 NaN 1305 816 223 223 916 969;970 1050;1052 1159;1161 1050 1159 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20519 1050 1159 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20519 1050 1159 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20519 P85037 445 P85037 P85037 Forkhead box protein K1 FOXK1 sp|P85037|FOXK1_HUMAN Forkhead box protein K1 OS=Homo sapiens GN=FOXK1 PE=1 SV=1 1 105.801 1.01989E-06 138.66 113.29 138.66 1 S RSGGLQTPECLSREGSPIPHDPEFGSKLASV X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX EGS(1)PIPHDPEFGSK EGS(105.8)PIPHDPEFGS(-105.8)K 3 3 0.020315 24543 0 0 26661 0 0 24865 0 0 26051 0 0 18232 0 0 26828 0 0 21304 0 0 26680 0 0 28334 0 0 9804 0 0 23225 0 0 25182 0 0 24943 0 0 26798 0 0 18943 0 0 26873 0 0 21731 0 0 27063 0 0 27659 0 0 9849.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 263270000 263270000 0 0 NaN 1306 816 445 445 979 1033 1119 1234 1119 1234 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14061 1119 1234 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14061 1119 1234 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14061 P85037 101 P85037 P85037 Forkhead box protein K1 FOXK1 sp|P85037|FOXK1_HUMAN Forkhead box protein K1 OS=Homo sapiens GN=FOXK1 PE=1 SV=1 1 95.4772 0.00360896 95.477 41.702 95.477 1 S AAPALVAAAAASVRQSPGPALARLEGREFEF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPXXXXXXXX QS(1)PGPALAR QS(95.48)PGPALAR 2 2 -1.4609 33857 0 0 28104 0 0 35299 0 0 30917 0 0 22891 0 0 31823 0 0 22439 0 0 27621 0 0 29270 0 0 6218.2 0 0 32043 0 0 26564 0 0 35309 0 0 31587 0 0 23962 0 0 31817 0 0 23050 0 0 28056 0 0 28591 0 0 6494.4 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 28757000 28757000 0 0 NaN 1307 816 101 101 3144 3335 3566 3954;3955 3566 3954 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8445 3566 3954 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8445 3566 3954 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8445 P85037 420 P85037 P85037 Forkhead box protein K1 FOXK1 sp|P85037|FOXK1_HUMAN Forkhead box protein K1 OS=Homo sapiens GN=FOXK1 PE=1 SV=1 0.985922 18.4607 3.95243E-07 157.73 127.66 157.73 1 S FRTPFGPLSSRSAPASPTHPGLMSPRSGGLQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPXXXXX SAPAS(0.986)PT(0.014)HPGLMSPR S(-46)APAS(18.46)PT(-18.46)HPGLMS(-98.46)PR 5 3 0.25337 15960 0 0 15698 0 0 15942 0 0 14575 0 0 13134 0 0 18397 0 0 15441 0 0 15502 0 0 15131 0 0 2314 0 0 15102 0 0 14823 0 0 16023 0 0 15095 0 0 13526 0 0 18238 0 0 15599 0 0 15731 0 0 14943 0 0 2537.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 38918000 38918000 0 0 NaN 1308 816 420 420 3590 3816 4069 4524 4069 4524 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10477 4069 4524 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10477 4069 4524 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10477 P85037 441 P85037 P85037 Forkhead box protein K1 FOXK1 sp|P85037|FOXK1_HUMAN Forkhead box protein K1 OS=Homo sapiens GN=FOXK1 PE=1 SV=1 0.999993 51.4342 0.0050163 92.661 72.28 92.661 1 S LMSPRSGGLQTPECLSREGSPIPHDPEFGSK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPXXXXXXXXXXXXXX SGGLQTPECLS(1)R S(-86.13)GGLQT(-51.43)PECLS(51.43)R 11 2 -0.70825 24943 0 0 24515 0 0 25929 0 0 24572 0 0 19037 0 0 23596 0 0 23671 0 0 25153 0 0 27663 0 0 8193.8 0 0 23606 0 0 23158 0 0 25977 0 0 25211 0 0 19795 0 0 23730 0 0 23982 0 0 25417 0 0 27126 0 0 8297.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 44832000 44832000 0 0 NaN 1309 816 441 441 3785 4032 4301 4780 4301 4780 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11583 4301 4780 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11583 4301 4780 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11583 P85037 243 P85037 P85037 Forkhead box protein K1 FOXK1 sp|P85037|FOXK1_HUMAN Forkhead box protein K1 OS=Homo sapiens GN=FOXK1 PE=1 SV=1 0.82287 7.04698 0.00358253 92.238 69.139 92.238 1 S HIPEPDLRSMVSPVPSPTGTISVPNSCPASP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPPP SMVS(0.001)PVPS(0.823)PT(0.162)GT(0.013)ISVPNSCPASPR S(-33.78)MVS(-29.84)PVPS(7.05)PT(-7.05)GT(-17.86)IS(-44.11)VPNS(-64.88)CPAS(-64.2)PR 8 3 -1.364 4553.8 0 0 6148.9 0 0 4771.5 0 0 5817.1 0 0 5315.7 0 0 3800.3 0 0 4728.4 0 0 5251.4 0 0 5463.6 0 0 17245 0 0 4309.9 0 0 5806.8 0 0 4797.7 0 0 5960.6 0 0 5354.6 0 0 3949.9 0 0 4861.4 0 0 5730.9 0 0 5359.7 0 0 16360 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11387000 11387000 0 0 NaN 1310 816 243 243 4038 4307 4595 5103 4595 5103 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17631 4595 5103 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17631 4595 5103 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17631 P85037 257 P85037 P85037 Forkhead box protein K1 FOXK1 sp|P85037|FOXK1_HUMAN Forkhead box protein K1 OS=Homo sapiens GN=FOXK1 PE=1 SV=1 0.861004 7.92156 5.81239E-08 156.11 114.2 156.11 1 S PSPTGTISVPNSCPASPRGAGSSSYRFVQNV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX SMVSPVPSPTGTISVPNS(0.139)CPAS(0.861)PR S(-125.91)MVS(-114.92)PVPS(-103.29)PT(-90.31)GT(-71.94)IS(-42.47)VPNS(-7.92)CPAS(7.92)PR 22 3 -1.2692 5690.1 0 0 4711.9 0 0 5691.2 0 0 5515.6 0 0 7475.3 0 0 5496.7 0 0 6655.9 0 0 5756 0 0 5765.3 0 0 21649 0 0 5384.3 0 0 4455.7 0 0 5750.9 0 0 5613.9 0 0 7468.2 0 0 5554.5 0 0 6790.1 0 0 6415.9 0 0 5726.4 0 0 20518 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17116000 17116000 0 0 NaN 1311 816 257 257 4038 4307 4596 5104 4596 5104 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18066 4596 5104 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18066 4596 5104 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18066 P98082 401 P98082 P98082 Disabled homolog 2 DAB2 sp|P98082|DAB2_HUMAN Disabled homolog 2 OS=Homo sapiens GN=DAB2 PE=1 SV=3 1 85.8419 0.000140567 104.21 84.445 104.21 1 S QNGFSVKSSPNPFVGSPPKGLSIQNGVKQDL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPXXXXXXXXXXXX SSPNPFVGS(1)PPK S(-85.84)S(-85.84)PNPFVGS(85.84)PPK 9 3 0.39645 5775.5 0 0 6686.7 0 0 5604.9 0 0 7672.9 0 0 5695.1 0 0 5356.9 0 0 6339.6 0 0 6297.8 0 0 7602.3 0 0 2830.3 0 0 5464.5 0 0 6322.4 0 0 5656 0 0 7780.9 0 0 5784.4 0 0 5490 0 0 6456.8 0 0 6366 0 0 7447.6 0 0 2810.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9709100 9709100 0 0 NaN 1312 817 401 401 4386 4673 4977 5523 4977 5523 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15905 4977 5523 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15905 4977 5523 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15905 P98171 906 P98171 P98171 Rho GTPase-activating protein 4 ARHGAP4 sp|P98171|RHG04_HUMAN Rho GTPase-activating protein 4 OS=Homo sapiens GN=ARHGAP4 PE=1 SV=2 0.99681 25.8759 8.23719E-08 161.04 137.87 161.04 1 S GLGPASTTSPSPGPRSPKAPPSSRLGRNKGF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX QGLGPASTTSPS(0.003)PGPRS(0.997)PK QGLGPAS(-50.8)T(-39.6)T(-35.05)S(-37.33)PS(-25.88)PGPRS(25.88)PK 17 3 -0.078676 38683 0 0 15933 0 0 37652 0 0 18922 0 0 30833 0 0 37087 0 0 33157 0 0 28507 0 0 17168 0 0 9876.4 0 0 36601 0 0 15068 0 0 37893 0 0 19538 0 0 31709 0 0 36275 0 0 33201 0 0 29225 0 0 17618 0 0 9959.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 80490000 80490000 0 0 NaN 1313 818 906 906 3033 3215 3438 3811 3438 3811 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10279 3438 3811 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10279 3438 3811 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10279 P98175 723 P98175 P98175 RNA-binding protein 10 RBM10 sp|P98175|RBM10_HUMAN RNA-binding protein 10 OS=Homo sapiens GN=RBM10 PE=1 SV=3 1 67.5466 3.40506E-07 160.79 119.7 160.79 1 S HTSMDLPKLASDDRPSPPRGLVAAYSGESDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX LASDDRPS(1)PPR LAS(-67.55)DDRPS(67.55)PPR 8 3 -0.066705 61338 0 0 58450 0 0 60490 0 0 61580 0 0 66110 0 0 66977 0 0 70139 0 0 61245 0 0 58354 0 0 7662.5 0 0 58038 0 0 55233 0 0 61035 0 0 63125 0 0 66803 0 0 66836 0 0 70879 0 0 61886 0 0 58078 0 0 8632.6 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 128160000 128160000 0 0 NaN 1314 819 723 723 2292 2421 2605 2910;2911 2605 2911 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8882 2605 2911 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8882 2605 2911 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8882 Q00059 193 Q00059 Q00059 Transcription factor A, mitochondrial TFAM sp|Q00059|TFAM_HUMAN Transcription factor A, mitochondrial OS=Homo sapiens GN=TFAM PE=1 SV=1 0.936298 11.6726 0.000142013 113.17 82.204 113.17 1 S PQEKLKTVKENWKNLSDSEKELYIQHAKEDE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX NLS(0.936)DS(0.064)EKELYIQHAK NLS(11.67)DS(-11.67)EKELY(-68.87)IQHAK 3 4 -0.58747 5734.6 0 0 6497.3 0 0 5937.6 0 0 6004.4 0 0 5379.1 0 0 4890.8 0 0 5054 0 0 5698.6 0 0 6262.5 0 0 3529.6 0 0 5427.2 0 0 6135 0 0 5959.7 0 0 6177.3 0 0 5488.2 0 0 4968.7 0 0 5193.2 0 0 5791.2 0 0 6127.9 0 0 3455.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10206000 10206000 0 0 NaN 1315 820 193 193 2857 3028 3243 3599 3243 3599 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15364 3243 3599 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15364 3243 3599 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15364 Q00341 31 Q00341 Q00341 Vigilin HDLBP sp|Q00341|VIGLN_HUMAN Vigilin OS=Homo sapiens GN=HDLBP PE=1 SV=2 0.999104 31.0352 3.28023E-08 174.02 145.69 174.02 1 S RSGLVPQQIKVATLNSEEESDPPTYKDAFPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPXXXXX VAT(0.001)LNS(0.999)EEESDPPTYK VAT(-31.04)LNS(31.04)EEES(-39.65)DPPT(-103.04)Y(-112.92)K 6 3 -0.21889 11462 0 0 10490 0 0 10470 0 0 9946.9 0 0 11860 0 0 12432 0 0 13133 0 0 12051 0 0 10920 0 0 8880.6 0 0 10842 0 0 9906.7 0 0 10619 0 0 10286 0 0 11969 0 0 12362 0 0 13247 0 0 12370 0 0 10869 0 0 8641 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26355000 26355000 0 0 NaN 1316 821 31 31 5060 5394 5746 6385 5746 6385 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15095 5746 6385 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15095 5746 6385 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15095 Q00536 64 Q00536 Q00536 Cyclin-dependent kinase 16 CDK16 sp|Q00536|CDK16_HUMAN Cyclin-dependent kinase 16 OS=Homo sapiens GN=CDK16 PE=1 SV=1 0.57069 1.2363 6.50347E-07 145.91 118.58 145.91 1 S TRAAPGELRSARGPLSSAPEIVHEDLKMGSD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPXXXX GPLS(0.571)S(0.429)APEIVHEDLK GPLS(1.24)S(-1.24)APEIVHEDLK 4 3 2.791 7442.1 0 0 8535.1 0 0 7221.6 0 0 8061.5 0 0 7832.5 0 0 8217.1 0 0 8583.7 0 0 7324.5 0 0 9405.3 0 0 8893.5 0 0 7041.3 0 0 8060.1 0 0 7293.3 0 0 8308.7 0 0 7923.8 0 0 8235 0 0 8723.9 0 0 7649.6 0 0 9245.3 0 0 8543.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17519000 17519000 0 0 NaN 1317 822 64 64 1549 1631 1760 1954 1760 1954 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18593 1760 1954 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18593 1760 1954 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18593 Q00536;Q00537 119;146 Q00536 Q00536 Cyclin-dependent kinase 16;Cyclin-dependent kinase 17 CDK16;CDK17 sp|Q00536|CDK16_HUMAN Cyclin-dependent kinase 16 OS=Homo sapiens GN=CDK16 PE=1 SV=1;sp|Q00537|CDK17_HUMAN Cyclin-dependent kinase 17 OS=Homo sapiens GN=CDK17 PE=1 SV=2 1 114.705 0.000307485 114.7 51.614 114.7 1 S HPPRKISTEDINKRLSLPADIRLPEGYLEKL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX RLS(1)LPADIR RLS(114.7)LPADIR 3 3 -1.0667 5498.9 0 0 3900.2 0 0 4897.3 0 0 3247.7 0 0 5890.1 0 0 4843.5 0 0 4951.4 0 0 5763.7 0 0 3176 0 0 394.65 0 0 5201.1 0 0 3680.7 0 0 4976.3 0 0 3400.1 0 0 5903.8 0 0 4795.9 0 0 5036.6 0 0 5757.7 0 0 3209.1 0 0 505 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11760000 11760000 0 0 NaN 1318 822 119 119 3330 3532 3769 4185 3769 4185 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16099 3769 4185 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16099 3769 4185 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16099 Q00536 153 Q00536 Q00536 Cyclin-dependent kinase 16 CDK16 sp|Q00536|CDK16_HUMAN Cyclin-dependent kinase 16 OS=Homo sapiens GN=CDK16 PE=1 SV=1 0.994986 22.9761 4.56336E-05 130.47 96.586 130.47 1 S SPIFDKPLSRRLRRVSLSEIGFGKLETYIKL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX RVS(0.995)LS(0.005)EIGFGK RVS(22.98)LS(-22.98)EIGFGK 3 3 -0.09905 6084.9 0 0 6775.6 0 0 5927.8 0 0 6914.4 0 0 11320 0 0 6037.1 0 0 10931 0 0 7973.5 0 0 7284.5 0 0 4526.5 0 0 5757.3 0 0 6401.5 0 0 6043.3 0 0 7076.9 0 0 11161 0 0 6123.2 0 0 11046 0 0 8059.3 0 0 7342.3 0 0 4446.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14271000 14271000 0 0 NaN 1319 822 153 153 3557 3776 4025 4471 4025 4471 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19263 4025 4471 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19263 4025 4471 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19263 Q00577 182 Q00577 Q00577 Transcriptional activator protein Pur-alpha PURA sp|Q00577|PURA_HUMAN Transcriptional activator protein Pur-alpha OS=Homo sapiens GN=PURA PE=1 SV=2 0.852551 7.6208 2.39227E-08 164.35 145.84 164.35 1 S FLRIRQTVNRGPGLGSTQGQTIALPAQGLIE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP GPGLGS(0.853)T(0.147)QGQTIALPAQGLIEFR GPGLGS(7.62)T(-7.62)QGQT(-73.27)IALPAQGLIEFR 6 3 -0.75854 5191.4 0 0 5872 0 0 5629.9 0 0 7983.7 0 0 6850.4 0 0 7141.8 0 0 7271.8 0 0 7892.4 0 0 7232.8 0 0 37224 0 0 4914.1 0 0 5559.1 0 0 5659.5 0 0 8055 0 0 6885.7 0 0 7275.7 0 0 7380.8 0 0 9009.2 0 0 7138.2 0 0 35233 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 39006000 39006000 0 0 NaN 1320 823 182 182 1543 1625 1754 1947 1754 1947 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23544 1754 1947 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23544 1754 1947 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23544 Q00587 350 Q00587 Q00587 Cdc42 effector protein 1 CDC42EP1 sp|Q00587|BORG5_HUMAN Cdc42 effector protein 1 OS=Homo sapiens GN=CDC42EP1 PE=1 SV=1 0.99613 24.1064 0.000102378 125.82 104.59 125.82 1 S DARQERVEVLPQARASWESLDEEWRAPQAGS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPXXXXXX AS(0.996)WES(0.004)LDEEWR AS(24.11)WES(-24.11)LDEEWR 2 2 -1.4505 11711 0 0 12167 0 0 13330 0 0 11532 0 0 4785.1 0 0 12719 0 0 5950.5 0 0 12408 0 0 11535 0 0 41264 0 0 11087 0 0 11491 0 0 13227 0 0 11899 0 0 5382.2 0 0 12770 0 0 6154 0 0 13702 0 0 11144 0 0 39143 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17272000 17272000 0 0 NaN 1321 824 350 350 517 549 589 656 589 656 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20938 589 656 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20938 589 656 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20938 Q00587 101 Q00587 Q00587 Cdc42 effector protein 1 CDC42EP1 sp|Q00587|BORG5_HUMAN Cdc42 effector protein 1 OS=Homo sapiens GN=CDC42EP1 PE=1 SV=1 0.999362 31.9476 6.66104E-06 135.21 115.9 135.21 1 S LQLVRRVGAPPRRMASPPAPSPAPPAISPII X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP MAS(0.999)PPAPS(0.001)PAPPAISPIIK MAS(31.95)PPAPS(-31.95)PAPPAIS(-109.06)PIIK 3 3 -0.83459 6706.4 0 0 6012.8 0 0 6863.6 0 0 6771.6 0 0 4068.2 0 0 6785.3 0 0 3206.6 0 0 6809.4 0 0 7383.4 0 0 18243 0 0 6346.5 0 0 5684.5 0 0 6866.4 0 0 6906.8 0 0 4285.3 0 0 6835.3 0 0 3419.8 0 0 7379.1 0 0 7108 0 0 17336 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11303000 11303000 0 0 NaN 1322 824 101 101 2668 2819 3024 3369 3024 3369 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21041 3024 3369 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21041 3024 3369 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21041 Q00587 121 Q00587 Q00587 Cdc42 effector protein 1 CDC42EP1 sp|Q00587|BORG5_HUMAN Cdc42 effector protein 1 OS=Homo sapiens GN=CDC42EP1 PE=1 SV=1 1 125.89 5.14102E-17 246.2 216.82 246.2 1 S SPAPPAISPIIKNAISLPQLNQAAYDSLVVG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP NAIS(1)LPQLNQAAYDSLVVGK NAIS(125.89)LPQLNQAAY(-125.89)DS(-146.81)LVVGK 4 3 -0.36416 53820 0 0 50952 0 0 64382 0 0 52560 0 0 5167.3 0 0 63860 0 0 6389 0 0 46692 0 0 55173 0 0 47575 0 0 50967 0 0 48142 0 0 63499 0 0 54050 0 0 8803.4 0 0 63380 0 0 7780.7 0 0 48934 0 0 52370 0 0 45878 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 117560000 117560000 0 0 NaN 1323 824 121 121 2772 2941 3151 3501 3151 3501 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23573 3151 3501 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23573 3151 3501 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23573 Q00587 192 Q00587 Q00587 Cdc42 effector protein 1 CDC42EP1 sp|Q00587|BORG5_HUMAN Cdc42 effector protein 1 OS=Homo sapiens GN=CDC42EP1 PE=1 SV=1 0.987179 18.8655 0.000155117 126.83 81.234 126.83 1 S RDGSFPSEPGLRRSDSLLSFRLDLDLGPSLL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX RS(0.013)DS(0.987)LLSFR RS(-18.87)DS(18.87)LLS(-55.68)FR 4 3 -3.1111 8882.7 0 0 7660.6 0 0 8337.9 0 0 6903.1 0 0 5648.4 0 0 9620.5 0 0 5816.5 0 0 6929.3 0 0 7306.1 0 0 1647.3 0 0 8403.3 0 0 7232.4 0 0 8394.5 0 0 7177.8 0 0 5894.6 0 0 9491.2 0 0 5953.4 0 0 7104.6 0 0 7145.8 0 0 1711.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9638800 9638800 0 0 NaN 1324 824 192 192 3465 3681 3927 4362 3927 4362 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15312 3927 4362 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15312 3927 4362 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15312 Q00613 121 Q00613 Q00613 Heat shock factor protein 1 HSF1 sp|Q00613|HSF1_HUMAN Heat shock factor protein 1 OS=Homo sapiens GN=HSF1 PE=1 SV=1 0.93813 12.4477 0.0318122 51.463 36.773 51.463 1 S RGQEQLLENIKRKVTSVSTLKSEDIKIRQDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX KVT(0.053)S(0.938)VS(0.008)T(0.001)LK KVT(-12.45)S(12.45)VS(-20.9)T(-30.42)LK 4 3 0.41916 19254 0 0 18026 0 0 21479 0 0 17632 0 0 17710 0 0 20788 0 0 20093 0 0 20736 0 0 19722 0 0 6849.3 0 0 18228 0 0 17027 0 0 21458 0 0 18178 0 0 18228 0 0 20708 0 0 20329 0 0 21008 0 0 19476 0 0 6929.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14450000 14450000 0 0 NaN 1325 826 121 121 2271 2400 2583 2886 2583 2886 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13678 2583 2886 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13678 2583 2886 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13678 Q00613 314 Q00613 Q00613 Heat shock factor protein 1 HSF1 sp|Q00613|HSF1_HUMAN Heat shock factor protein 1 OS=Homo sapiens GN=HSF1 PE=1 SV=1 0.999967 46.9084 1.58392E-18 246.32 222.75 246.32 1 S EEPPSPPQSPRVEEASPGRPSSVDTLLSPTA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP VEEAS(1)PGRPSSVDTLLSPTALIDSILR VEEAS(46.91)PGRPS(-49.19)S(-46.91)VDT(-65.7)LLS(-112.85)PT(-112.04)ALIDS(-152.3)ILR 5 3 0.35209 15545 0 0 13791 0 0 16952 0 0 12450 0 0 11675 0 0 19710 0 0 12375 0 0 18077 0 0 14004 0 0 180700 0 0 14715 0 0 13020 0 0 16925 0 0 12982 0 0 12171 0 0 19752 0 0 12608 0 0 23640 0 0 13749 0 0 170570 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 92142000 92142000 0 0 NaN 1326 826 314 314 5085 5420 5772 6414;6415 5772 6414 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24215 5772 6414 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24215 5772 6414 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24215 Q00722 953 Q00722 Q00722 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 PLCB2 sp|Q00722|PLCB2_HUMAN 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 OS=Homo sapiens GN=PLCB2 PE=1 SV=2 1 74.9442 0.00952873 74.944 49.385 74.944 1 S GVGGVGACKLGPGKGSRKKRSLPREESAGAA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPXXXXXXXXXXXXXX LGPGKGS(1)R LGPGKGS(74.94)R 7 3 0.31923 26070 0 0 13091 0 0 27638 0 0 12049 0 0 149320 0 0 24414 0 0 148360 0 0 65696 0 0 10690 0 0 1639.8 0 0 24675 0 0 12360 0 0 29228 0 0 12634 0 0 144210 0 0 24440 0 0 147300 0 0 64347 0 0 16387 0 0 3064.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 145960000 145960000 0 0 NaN 1327 828 953 953 2378 2515 2707 3025 2707 3025 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8430 2707 3025 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8430 2707 3025 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8430 Q00839 187 Q00839 Q00839 Heterogeneous nuclear ribonucleoprotein U HNRNPU sp|Q00839|HNRPU_HUMAN Heterogeneous nuclear ribonucleoprotein U OS=Homo sapiens GN=HNRNPU PE=1 SV=6 0.423071 0 2.25629E-07 142.97 121.38 142.97 S QPQQQRGAAKEAAGKSSGPTSLFAVTVAPPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.423)S(0.423)GPT(0.15)S(0.004)LFAVTVAPPGAR S(0)S(0)GPT(-4.51)S(-19.97)LFAVT(-113.39)VAPPGAR 1 3 0.19796 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1328 829 187 187 4351 4637 4940 5484 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21821 4940 5484 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21821 4940 5484 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21821 Q00839 188 Q00839 Q00839 Heterogeneous nuclear ribonucleoprotein U HNRNPU sp|Q00839|HNRPU_HUMAN Heterogeneous nuclear ribonucleoprotein U OS=Homo sapiens GN=HNRNPU PE=1 SV=6 0.423071 0 2.25629E-07 142.97 121.38 142.97 S PQQQRGAAKEAAGKSSGPTSLFAVTVAPPGA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.423)S(0.423)GPT(0.15)S(0.004)LFAVTVAPPGAR S(0)S(0)GPT(-4.51)S(-19.97)LFAVT(-113.39)VAPPGAR 2 3 0.19796 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1329 829 188 188 4351 4637 4940 5484 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21821 4940 5484 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21821 4940 5484 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21821 Q00839 2 Q00839 Q00839 Heterogeneous nuclear ribonucleoprotein U HNRNPU sp|Q00839|HNRPU_HUMAN Heterogeneous nuclear ribonucleoprotein U OS=Homo sapiens GN=HNRNPU PE=1 SV=6 0.391882 1.10198 0.000317571 63.565 44.109 63.565 S ______________MSSSPVNVKKLKVSELK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(0.392)S(0.304)S(0.304)PVNVKK S(1.1)S(-1.1)S(-1.1)PVNVKK 1 2 -0.76011 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1330 829 2 2 4454;4455 4745;4746 5051 5604 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10404 5051 5604 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10404 5051 5604 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10404 Q00839 4 Q00839 Q00839 Heterogeneous nuclear ribonucleoprotein U HNRNPU sp|Q00839|HNRPU_HUMAN Heterogeneous nuclear ribonucleoprotein U OS=Homo sapiens GN=HNRNPU PE=1 SV=6 0.849918 8.05338 0.000886102 91.318 86.962 91.318 1 S ____________MSSSPVNVKKLKVSELKEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX S(0.017)S(0.133)S(0.85)PVNVK S(-16.98)S(-8.05)S(8.05)PVNVK 3 2 -0.48414 62467 0 0 46925 0 0 58943 0 0 50656 0 0 47805 0 0 56397 0 0 50493 0 0 49593 0 0 48351 0 0 6999.3 0 0 59096 0 0 44350 0 0 59424 0 0 51877 0 0 49206 0 0 56201 0 0 51210 0 0 50220 0 0 47799 0 0 7738.4 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 10654000000 10654000000 0 0 NaN 1331 829 4 4 4454;4455 4745;4746 5050 5602;5603 5050 5602 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9905 5050 5602 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9905 5050 5602 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9905 Q01082 2341 Q01082 Q01082 Spectrin beta chain, non-erythrocytic 1 SPTBN1 sp|Q01082|SPTB2_HUMAN Spectrin beta chain, non-erythrocytic 1 OS=Homo sapiens GN=SPTBN1 PE=1 SV=2 0.8021 6.07837 4.73252E-23 267.47 239.36 267.47 1 S AQTLPTSVVTITSESSPGKREKDKEKDKEKR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX AQTLPTSVVTITSES(0.198)S(0.802)PGKR AQT(-204.87)LPT(-153.87)S(-155.34)VVT(-109.92)IT(-68.64)S(-45.26)ES(-6.08)S(6.08)PGKR 16 3 -0.60997 8622.6 0 0 18400 0 0 8772.4 0 0 18762 0 0 9857.9 0 0 8544 0 0 10070 0 0 12251 0 0 20891 0 0 15584 0 0 8159.8 0 0 17384 0 0 8838.4 0 0 19078 0 0 9953 0 0 9096 0 0 10537 0 0 12615 0 0 20154 0 0 14958 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 155570000 155570000 0 0 NaN 1332 830 2341 2341 409 437 472 526 472 526 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16831 472 526 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16831 472 526 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16831 Q01082 2102 Q01082 Q01082 Spectrin beta chain, non-erythrocytic 1 SPTBN1 sp|Q01082|SPTB2_HUMAN Spectrin beta chain, non-erythrocytic 1 OS=Homo sapiens GN=SPTBN1 PE=1 SV=2 0.985983 19.5513 0.0221572 58.32 42.429 58.32 1 S VRRQQEEEERKRRPPSPEPSTKVSEEAESQQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX RPPS(0.986)PEPS(0.011)T(0.003)K RPPS(19.55)PEPS(-19.55)T(-25.05)K 4 3 0.49058 10843 0 0 9272.2 0 0 10990 0 0 9778.9 0 0 9798.8 0 0 11311 0 0 9583 0 0 8913.3 0 0 9646.9 0 0 2637.5 0 0 10261 0 0 8762.1 0 0 11043 0 0 10034 0 0 10011 0 0 11244 0 0 9766.8 0 0 9113.1 0 0 9515.9 0 0 2689.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 131400000 131400000 0 0 NaN 1333 830 2102 2102 3399 3611 3852 4277 3852 4277 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7440 3852 4277 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7440 3852 4277 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7440 Q01105 7 Q01105 Q01105 Protein SET SET sp|Q01105|SET_HUMAN Protein SET OS=Homo sapiens GN=SET PE=1 SV=3 1 84.6051 0.00624934 84.605 57.77 84.605 1 S _________MAPKRQSPLPPQKKKPRPPPAL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX RQS(1)PLPPQK RQS(84.61)PLPPQK 3 3 0.18221 24548 0 0 14577 0 0 28304 0 0 15345 0 0 42067 0 0 27436 0 0 39085 0 0 25157 0 0 14419 0 0 5402.5 0 0 23243 0 0 13775 0 0 28447 0 0 15904 0 0 41811 0 0 26943 0 0 39253 0 0 25485 0 0 15273 0 0 5669.4 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 25045000 25045000 0 0 NaN 1334 831 7 7 3426 3638 3880 4306;4307 3880 4307 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8294 3880 4307 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8294 3880 4307 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8294 Q01130 206 Q01130 Q01130 Serine/arginine-rich splicing factor 2 SRSF2 sp|Q01130|SRSF2_HUMAN Serine/arginine-rich splicing factor 2 OS=Homo sapiens GN=SRSF2 PE=1 SV=4 0.712542 3.92038 0.00699996 85.805 72.074 85.805 2 S SPPPVSKRESKSRSRSKSPPKSPEEEGAVSS Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.713)KS(0.288)PPKS(0.008)PEEEGAVS(0.861)S(0.13) S(3.92)KS(-3.92)PPKS(-19.49)PEEEGAVS(8.23)S(-8.23) 1 3 -0.017825 0 82762 0 0 37441 0 0 83192 0 0 38922 0 0 52624 0 0 81578 0 0 50549 0 0 55501 0 0 38134 0 0 22832 0 0 78316 0 0 35378 0 0 83366 0 0 40559 0 0 55166 0 0 79582 0 0 51215 0 0 57370 0 0 38153 0 0 22784 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 37724000 0 37724000 0 NaN 1335 832 206 206 3905 4162;4163 4443 4938;4939;4940 4443 4938 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10416 4443 4938 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10416 4443 4938 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10416 Q01130 208 Q01130 Q01130 Serine/arginine-rich splicing factor 2 SRSF2 sp|Q01130|SRSF2_HUMAN Serine/arginine-rich splicing factor 2 OS=Homo sapiens GN=SRSF2 PE=1 SV=4 0.775268 6.23211 0.000473593 100.9 76.615 100.9 1 S PPVSKRESKSRSRSKSPPKSPEEEGAVSS__ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX S(0.185)KS(0.775)PPKS(0.032)PEEEGAVS(0.005)S(0.003) S(-6.23)KS(6.23)PPKS(-13.84)PEEEGAVS(-21.99)S(-23.83) 3 3 0.54814 13754 0 0 12008 0 0 14258 0 0 12646 0 0 22576 0 0 15815 0 0 21412 0 0 15881 0 0 12882 0 0 11439 0 0 13017 0 0 11347 0 0 14428 0 0 12997 0 0 22394 0 0 15733 0 0 21618 0 0 16272 0 0 13072 0 0 11139 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14902000 14902000 0 0 NaN 1336 832 208 208 3905 4162;4163 4442 4937 4442 4937 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9687 4442 4937 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9687 4442 4937 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9687 Q01130 220 Q01130 Q01130 Serine/arginine-rich splicing factor 2 SRSF2 sp|Q01130|SRSF2_HUMAN Serine/arginine-rich splicing factor 2 OS=Homo sapiens GN=SRSF2 PE=1 SV=4 0.861344 8.22855 0.00699996 85.805 72.074 85.805 2 S RSKSPPKSPEEEGAVSS______________ X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPXXXXXXXXXXXXXX S(0.713)KS(0.288)PPKS(0.008)PEEEGAVS(0.861)S(0.13) S(3.92)KS(-3.92)PPKS(-19.49)PEEEGAVS(8.23)S(-8.23) 15 3 -0.017825 0 82762 0 0 37441 0 0 83192 0 0 38922 0 0 52624 0 0 81578 0 0 50549 0 0 55501 0 0 38134 0 0 22832 0 0 78316 0 0 35378 0 0 83366 0 0 40559 0 0 55166 0 0 79582 0 0 51215 0 0 57370 0 0 38153 0 0 22784 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 37724000 0 37724000 0 NaN 1337 832 220 220 3905 4162;4163 4443 4938;4939;4940 4443 4938 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10416 4443 4938 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10416 4443 4938 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10416 Q01130 191 Q01130 Q01130 Serine/arginine-rich splicing factor 2 SRSF2 sp|Q01130|SRSF2_HUMAN Serine/arginine-rich splicing factor 2 OS=Homo sapiens GN=SRSF2 PE=1 SV=4 1 71.6676 0.000190673 123.68 98.823 123.68 1;2 S VSRSRSRSRSRSRSRSPPPVSKRESKSRSRS X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY) XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX S(1)RS(1)PPPVSK S(80.74)RS(71.67)PPPVS(-71.67)K 3 3 0.38204 64798 217670 0 64179 219250 0 75780 224290 0 61241 215160 0 65666 210560 0 65263 219280 0 72172 217630 0 64255 212120 0 65817 226030 0 8079 7298.2 0 61357 206000 0 60611 207100 0 75563 225310 0 63124 221230 0 67322 214600 0 65239 219530 0 72978 221420 0 64734 213270 0 65211 222670 0 9094.5 11781 0 2 5 0 2 5 0 2 5 0 2 5 0 2 5 0 2 5 0 2 5 0 2 5 0 2 5 0 2 5 0 576650000 159220000 417420000 0 NaN 1338 832 191 191 4148;4297 4422;4581;4582 4713;4881;4882 5231;5418;5419;5420;5421;5422;5423 4882 5421 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8277 4882 5421 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8277 4882 5421 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8277 Q01130 189 Q01130 Q01130 Serine/arginine-rich splicing factor 2 SRSF2 sp|Q01130|SRSF2_HUMAN Serine/arginine-rich splicing factor 2 OS=Homo sapiens GN=SRSF2 PE=1 SV=4 1 80.7357 0.000190673 123.68 98.823 123.68 2 S SSVSRSRSRSRSRSRSRSPPPVSKRESKSRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(1)RS(1)PPPVSK S(80.74)RS(71.67)PPPVS(-71.67)K 1 3 0.38204 0 217670 0 0 219250 0 0 224290 0 0 215160 0 0 210560 0 0 219280 0 0 217630 0 0 212120 0 0 226030 0 0 7298.2 0 0 206000 0 0 207100 0 0 225310 0 0 221230 0 0 214600 0 0 219530 0 0 221420 0 0 213270 0 0 222670 0 0 11781 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 417420000 0 417420000 0 NaN 1339 832 189 189 4297 4581;4582 4882 5419;5420;5421;5422;5423 4882 5421 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8277 4882 5421 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8277 4882 5421 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8277 Q01130 2 Q01130 Q01130 Serine/arginine-rich splicing factor 2 SRSF2 sp|Q01130|SRSF2_HUMAN Serine/arginine-rich splicing factor 2 OS=Homo sapiens GN=SRSF2 PE=1 SV=4 0.913309 10.2265 1.3068E-10 126.76 113.34 126.76 1 S ______________MSYGRPPPDVEGMTSLK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.913)Y(0.087)GRPPPDVEGMTSLK S(10.23)Y(-10.23)GRPPPDVEGMT(-110.65)S(-115.49)LK 1 2 0.27731 27980 0 0 38206 0 0 30293 0 0 35265 0 0 72180 0 0 28884 0 0 72429 0 0 48380 0 0 39430 0 0 35984 0 0 26485 0 0 36075 0 0 30884 0 0 36286 0 0 70748 0 0 29549 0 0 72811 0 0 48858 0 0 40306 0 0 35003 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 121100000 121100000 0 0 NaN 1340 832 2 2 4594 4899;4900 5219;5220 5795;5796;5797 5220 5797 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17800 5220 5797 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17800 5220 5797 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17800 Q01130 26 Q01130 Q01130 Serine/arginine-rich splicing factor 2 SRSF2 sp|Q01130|SRSF2_HUMAN Serine/arginine-rich splicing factor 2 OS=Homo sapiens GN=SRSF2 PE=1 SV=4 0.976987 16.3455 3.77612E-09 210.05 74.205 164.59 1 S EGMTSLKVDNLTYRTSPDTLRRVFEKYGRVG X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPXXXXXXXXXX VDNLTYRT(0.023)S(0.977)PDTLR VDNLT(-59.57)Y(-105.77)RT(-16.35)S(16.35)PDT(-34.48)LR 9 3 -0.34649 74034 0 0 105260 0 0 69018 0 0 99955 0 0 96916 0 0 71061 0 0 104480 0 0 100480 0 0 109700 0 0 15829 0 0 70036 0 0 99403 0 0 70142 0 0 102490 0 0 96815 0 0 72916 0 0 106130 0 0 100120 0 0 108020 0 0 17230 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 619860000 619860000 0 0 NaN 1341 832 26 26 4931;4932;5074 5256;5257;5409 5599;5761 6222;6403 5761 6403 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13827 5599 6222 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7989 5599 6222 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7989 Q01167 30 Q01167 Q01167 Forkhead box protein K2 FOXK2 sp|Q01167|FOXK2_HUMAN Forkhead box protein K2 OS=Homo sapiens GN=FOXK2 PE=1 SV=3 0.99995 44.6291 1.00534E-05 62.172 45.024 62.172 1 S PAGGGAGGGGAGGGGSPPGGWAVARLEGREF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPXXXXXX AAAAAALSGAGTPPAGGGAGGGGAGGGGS(1)PPGGWAVAR AAAAAALS(-48.1)GAGT(-44.63)PPAGGGAGGGGAGGGGS(44.63)PPGGWAVAR 29 3 -0.48602 2567.3 0 0 2211.2 0 0 2125.9 0 0 2228.6 0 0 2328.7 0 0 2046 0 0 2922.5 0 0 3558.7 0 0 2812.1 0 0 23062 0 0 2427.7 0 0 2089 0 0 2169.6 0 0 2284.2 0 0 2359.5 0 0 2121.4 0 0 2943.3 0 0 4205.9 0 0 2779.4 0 0 21798 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 50965000 50965000 0 0 NaN 1342 833 30 30 1 2 5 12 5 12 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20156 5 12 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20156 5 12 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20156 Q01167 398 Q01167 Q01167 Forkhead box protein K2 FOXK2 sp|Q01167|FOXK2_HUMAN Forkhead box protein K2 OS=Homo sapiens GN=FOXK2 PE=1 SV=3 1 147.002 3.28619E-07 147 125.34 147 1 S HSSGAQTPESLSREGSPAPLEPEPGAAQPKL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX EGS(1)PAPLEPEPGAAQPK EGS(147)PAPLEPEPGAAQPK 3 3 0.22387 15133 0 0 14863 0 0 16042 0 0 16984 0 0 18512 0 0 13242 0 0 16577 0 0 18528 0 0 19445 0 0 15197 0 0 14323 0 0 14053 0 0 16127 0 0 17249 0 0 18616 0 0 13535 0 0 17045 0 0 18838 0 0 19064 0 0 14739 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 76486000 76486000 0 0 NaN 1343 833 398 398 978 1032 1118 1233 1118 1233 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13146 1118 1233 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13146 1118 1233 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13146 Q01167 170 Q01167 Q01167 Forkhead box protein K2 FOXK2 sp|Q01167|FOXK2_HUMAN Forkhead box protein K2 OS=Homo sapiens GN=FOXK2 PE=1 SV=3 0.998502 28.2397 0.000116368 113.8 78.5 113.8 1 S TALSSEKREKQEASESPVKAVQPHISPLTIN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX EKQEAS(0.001)ES(0.999)PVK EKQEAS(-28.24)ES(28.24)PVK 8 3 0.48229 34128 0 0 40584 0 0 36912 0 0 38908 0 0 28967 0 0 34052 0 0 32048 0 0 35969 0 0 45256 0 0 6696.7 0 0 32304 0 0 38328 0 0 36916 0 0 39974 0 0 29921 0 0 34386 0 0 32836 0 0 36207 0 0 44093 0 0 7138.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 40057000 40057000 0 0 NaN 1344 833 170 170 1018 1074 1161 1279 1161 1279 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8322 1161 1279 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8322 1161 1279 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8322 Q01167 428 Q01167 Q01167 Forkhead box protein K2 FOXK2 sp|Q01167|FOXK2_HUMAN Forkhead box protein K2 OS=Homo sapiens GN=FOXK2 PE=1 SV=3 0.99999 50.6468 7.673E-12 203.53 176.01 203.53 1 S LAVIQEARFAQSAPGSPLSSQPVLITVQRQL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPXX FAQSAPGS(1)PLSSQPVLITVQR FAQS(-57.8)APGS(50.65)PLS(-50.65)S(-72.11)QPVLIT(-150.94)VQR 8 3 0.49234 6280.2 0 0 8147.9 0 0 5333.5 0 0 6948.1 0 0 5047.3 0 0 6034.6 0 0 5460.9 0 0 5972.3 0 0 7764.2 0 0 16572 0 0 5939.1 0 0 7690.2 0 0 5422.2 0 0 7192.6 0 0 5147 0 0 6120 0 0 5602 0 0 6492.5 0 0 7563.2 0 0 15743 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 70285000 70285000 0 0 NaN 1345 833 428 428 1238 1303 1403 1555 1403 1555 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20614 1403 1555 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20614 1403 1555 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20614 Q01196 21 Q01196 Q01196 Runt-related transcription factor 1 RUNX1 sp|Q01196|RUNX1_HUMAN Runt-related transcription factor 1 OS=Homo sapiens GN=RUNX1 PE=1 SV=3 0.999675 35.0823 3.28559E-07 145.52 118.92 145.52 1;2 S DASTSRRFTPPSTALSPGKMSEALPLGAPDA X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX FTPPSTALS(1)PGK FT(-91.24)PPS(-48.25)T(-35.08)ALS(35.08)PGK 9 3 0.25639 20056 19704 0 22547 18840 0 23128 21868 0 21641 19421 0 24727 26117 0 20802 22170 0 31064 27530 0 26632 22288 0 24928 21912 0 7818.2 10937 0 18989 18653 0 21294 17801 0 23143 21950 0 22263 19950 0 25082 26267 0 20976 22122 0 31148 27802 0 26723 22682 0 24857 21859 0 7978.1 10814 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 123180000 80941000 42241000 0 NaN 1346 834 21 21 1336;3237 1409;3433;3434 1516;3668;3670 1679;4069;4072;4073 1516 1679 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17035 1516 1679 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17035 1516 1679 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17035 Q01196 212 Q01196 Q01196 Runt-related transcription factor 1 RUNX1 sp|Q01196|RUNX1_HUMAN Runt-related transcription factor 1 OS=Homo sapiens GN=RUNX1 PE=1 SV=3 0.999991 50.4889 0.00844629 77.191 63.034 77.191 1 S RLSELEQLRRTAMRVSPHHPAPTPNPRASLN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPXXXX VS(1)PHHPAPTPNPR VS(50.49)PHHPAPT(-50.49)PNPR 2 3 0.57515 28922 0 0 16301 0 0 29249 0 0 19748 0 0 24813 0 0 27824 0 0 23312 0 0 22477 0 0 20657 0 0 4389.2 0 0 27369 0 0 15419 0 0 29376 0 0 20196 0 0 25418 0 0 27470 0 0 23729 0 0 22886 0 0 20495 0 0 4653.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26003000 26003000 0 0 NaN 1347 834 212 212 5263 5609 5979 6643 5979 6643 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6498 5979 6643 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6498 5979 6643 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6498 Q01432 83 Q01432 Q01432 AMP deaminase 3 AMPD3 sp|Q01432|AMPD3_HUMAN AMP deaminase 3 OS=Homo sapiens GN=AMPD3 PE=1 SV=1 0.593384 2.18081 0.000161441 102.59 85.101 102.59 1 S SVETAKRKKSFKMIRSQSLSLQMPPQQDWKG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPX S(0.593)QS(0.359)LS(0.047)LQMPPQQDWK S(2.18)QS(-2.18)LS(-10.97)LQMPPQQDWK 1 3 -0.76021 4717.5 0 0 5510.6 0 0 4859.6 0 0 4216.8 0 0 6456.5 0 0 4714.2 0 0 6965.7 0 0 6592.5 0 0 6292.9 0 0 30575 0 0 4464.5 0 0 5198.3 0 0 4905.7 0 0 4416.6 0 0 6464.4 0 0 4784.2 0 0 7047.6 0 0 7461.2 0 0 6237.7 0 0 28943 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5500500 5500500 0 0 NaN 1348 835 83 83 4242 4520 4817 5347 4817 5347 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19805 4817 5347 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19805 4817 5347 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19805 Q01433 168 Q01433 Q01433 AMP deaminase 2 AMPD2 sp|Q01433|AMPD2_HUMAN AMP deaminase 2 OS=Homo sapiens GN=AMPD2 PE=1 SV=2 1 175.928 2.19483E-09 175.93 122.37 175.93 1 S IEQLEERRQRLERQISQDVKLEPDILLRAKQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX QIS(1)QDVKLEPDILLR QIS(175.93)QDVKLEPDILLR 3 3 -0.39333 44955 0 0 84205 0 0 48544 0 0 78262 0 0 164110 0 0 45583 0 0 160710 0 0 99051 0 0 82461 0 0 30944 0 0 42552 0 0 79512 0 0 50083 0 0 80195 0 0 159590 0 0 47877 0 0 161610 0 0 98216 0 0 84683 0 0 31430 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 231680000 231680000 0 0 NaN 1349 836 168 168 3051;3052 3237;3238 3463;3464 3837;3838 3464 3838 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21578 3464 3838 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21578 3464 3838 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21578 Q01433 100 Q01433 Q01433 AMP deaminase 2 AMPD2 sp|Q01433|AMPD2_HUMAN AMP deaminase 2 OS=Homo sapiens GN=AMPD2 PE=1 SV=2 1 131.826 8.59046E-05 131.83 76.762 131.83 1 S EARGGLGAPPLQSARSLPGPAPCLKHFPLDL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPXXXXXX S(1)LPGPAPCLK S(131.83)LPGPAPCLK 1 2 0.13912 11806 0 0 13064 0 0 13484 0 0 11836 0 0 32346 0 0 12815 0 0 31154 0 0 19432 0 0 11577 0 0 28568 0 0 11178 0 0 12334 0 0 13710 0 0 12244 0 0 31675 0 0 12938 0 0 31233 0 0 20097 0 0 12253 0 0 27350 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15020000 15020000 0 0 NaN 1350 836 100 100 3961 4220 4503 5005 4503 5005 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16682 4503 5005 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16682 4503 5005 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16682 Q01518 34 Q01518 Q01518 Adenylyl cyclase-associated protein 1 CAP1 sp|Q01518|CAP1_HUMAN Adenylyl cyclase-associated protein 1 OS=Homo sapiens GN=CAP1 PE=1 SV=5 0.99709 25.3487 7.03103E-06 168.29 111.37 168.29 1 S EAVSHTSDMHRGYADSPSKAGAAPYVQAFDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX GYADS(0.997)PS(0.003)K GY(-80.59)ADS(25.35)PS(-25.35)K 5 2 1.0555 119720 0 0 164690 0 0 116300 0 0 157530 0 0 143870 0 0 123320 0 0 150020 0 0 148470 0 0 178800 0 0 11373 0 0 113270 0 0 155540 0 0 117650 0 0 161630 0 0 144490 0 0 125470 0 0 153200 0 0 148290 0 0 175200 0 0 14145 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 256260000 256260000 0 0 NaN 1351 838 34 34 1684 1776 1918 2136 1918 2136 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8521 1918 2136 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8521 1918 2136 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8521 Q01518 308 Q01518 Q01518 Adenylyl cyclase-associated protein 1 CAP1 sp|Q01518|CAP1_HUMAN Adenylyl cyclase-associated protein 1 OS=Homo sapiens GN=CAP1 PE=1 SV=5 0.99308 22.9672 0.000996241 115.41 55.504 115.41 1;2 S VRSGPKPFSAPKPQTSPSPKRATKKEPAVLE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPXXXXXXXXXXX PQT(0.005)S(0.993)PS(0.002)PK PQT(-22.97)S(22.97)PS(-27.17)PK 4 2 0.11811 89432 20329 0 108680 15642 0 92443 20031 0 106220 15949 0 96671 14530 0 105090 21424 0 122490 13588 0 116870 16723 0 124900 16595 0 17725 11225 0 84637 19235 0 102650 14778 0 93012 20118 0 109190 16445 0 98220 15059 0 105570 21193 0 123510 13959 0 117300 17295 0 123140 16246 0 19395 10956 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 300400000 247780000 52625000 0 NaN 1352 838 308 308 2974;2984;3794 3153;3163;4042 3376;3386;4311 3743;3756;4790 3386 3756 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7836 3386 3756 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7836 3386 3756 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7836 Q01518 310 Q01518 Q01518 Adenylyl cyclase-associated protein 1 CAP1 sp|Q01518|CAP1_HUMAN Adenylyl cyclase-associated protein 1 OS=Homo sapiens GN=CAP1 PE=1 SV=5 0.968588 14.1977 0.0561625 44.625 25.745 44.625 2 S SGPKPFSAPKPQTSPSPKRATKKEPAVLELE X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX S(0.002)GPKPFS(0.003)APKPQT(0.228)S(0.797)PS(0.969)PK S(-28.61)GPKPFS(-26.02)APKPQT(-5.88)S(5.88)PS(14.2)PK 16 4 -1.2626 0 20329 0 0 15642 0 0 20031 0 0 15949 0 0 14530 0 0 21424 0 0 13588 0 0 16723 0 0 16595 0 0 11225 0 0 19235 0 0 14778 0 0 20118 0 0 16445 0 0 15059 0 0 21193 0 0 13959 0 0 17295 0 0 16246 0 0 10956 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 52625000 0 52625000 0 NaN 1353 838 310 310 2974;2984;3794 3153;3163;4042 4311 4790 4311 4790 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13850 4311 4790 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13850 4311 4790 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13850 Q01543 39 Q01543 Q01543 Friend leukemia integration 1 transcription factor FLI1 sp|Q01543|FLI1_HUMAN Friend leukemia integration 1 transcription factor OS=Homo sapiens GN=FLI1 PE=1 SV=1 0.986676 18.7713 1.73356E-11 209.23 183.64 209.23 1 S GAAAHLPKADMTASGSPDYGQPHKINPLPPQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPXXXXXXX ADMTAS(0.013)GS(0.987)PDYGQPHK ADMT(-36.3)AS(-18.77)GS(18.77)PDY(-93.32)GQPHK 8 3 0.49676 22718 0 0 8151 0 0 25108 0 0 7548.4 0 0 43084 0 0 24257 0 0 53196 0 0 28372 0 0 7604.3 0 0 8030.7 0 0 21506 0 0 7696.5 0 0 25384 0 0 8055.7 0 0 42761 0 0 23635 0 0 52415 0 0 28542 0 0 9436.8 0 0 8218.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 74418000 74418000 0 0 NaN 1354 839 39 39 112 120 129 143 129 143 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10552 129 143 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10552 129 143 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10552 Q01543 241 Q01543 Q01543 Friend leukemia integration 1 transcription factor FLI1 sp|Q01543|FLI1_HUMAN Friend leukemia integration 1 transcription factor OS=Homo sapiens GN=FLI1 PE=1 SV=1 1 77.0527 1.32552E-24 270.28 246.19 270.28 1 S RRGAWGNNMNSGLNKSPPLGGAQTISKNTEQ X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPPPPPPPXXXX GAWGNNMNSGLNKS(1)PPLGGAQTISK GAWGNNMNS(-77.05)GLNKS(77.05)PPLGGAQT(-155.65)IS(-175.52)K 14 4 -0.55879 29207 0 0 12529 0 0 29696 0 0 11829 0 0 60770 0 0 28789 0 0 67420 0 0 37760 0 0 12394 0 0 65776 0 0 27639 0 0 11832 0 0 30267 0 0 12461 0 0 59876 0 0 28336 0 0 66802 0 0 39510 0 0 14563 0 0 62810 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 63765000 63765000 0 0 NaN 1355 839 241 241 1377 1452;1453 1560;1561;1562 1724;1725;1726 1560 1724 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16608 1560 1724 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16608 1560 1724 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16608 Q01581 4 Q01581 Q01581 Hydroxymethylglutaryl-CoA synthase, cytoplasmic HMGCS1 sp|Q01581|HMCS1_HUMAN Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Homo sapiens GN=HMGCS1 PE=1 SV=2 1 189.446 1.31064E-10 189.45 159.86 189.45 1 S ____________MPGSLPLNAEACWPKDVGI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX PGS(1)LPLNAEACWPK PGS(189.45)LPLNAEACWPK 3 3 -0.22873 3432.1 0 0 10098 0 0 3964.4 0 0 9625.5 0 0 4582.7 0 0 4015.3 0 0 6011 0 0 7422.4 0 0 11570 0 0 10914 0 0 3249.6 0 0 9536.1 0 0 3971.6 0 0 9821.8 0 0 4639.5 0 0 4338.4 0 0 6202.4 0 0 7642 0 0 11180 0 0 10448 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16593000 16593000 0 0 NaN 1356 840 4 4 2977 3156 3379 3747 3379 3747 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20858 3379 3747 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20858 3379 3747 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20858 Q01581 495 Q01581 Q01581 Hydroxymethylglutaryl-CoA synthase, cytoplasmic HMGCS1 sp|Q01581|HMCS1_HUMAN Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Homo sapiens GN=HMGCS1 PE=1 SV=2 0.999962 44.199 9.39008E-08 161.29 140.16 161.29 1 S GVGLVHSNIATEHIPSPAKKVPRLPATAAEP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX RPTPNDDTLDEGVGLVHSNIATEHIPS(1)PAK RPT(-139.78)PNDDT(-131.93)LDEGVGLVHS(-69.31)NIAT(-44.2)EHIPS(44.2)PAK 27 5 -0.057011 8248.5 0 0 10366 0 0 8625.1 0 0 12747 0 0 9771.6 0 0 7617.4 0 0 9383.2 0 0 9531.9 0 0 11410 0 0 10756 0 0 7806.6 0 0 9805.6 0 0 8676.6 0 0 12861 0 0 9845 0 0 7908.6 0 0 9625.5 0 0 9811.1 0 0 11172 0 0 10348 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24262000 24262000 0 0 NaN 1357 840 495 495 3418 3630 3872 4298 3872 4298 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17283 3872 4298 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17283 3872 4298 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17283 Q01664 124 Q01664 Q01664 Transcription factor AP-4 TFAP4 sp|Q01664|TFAP4_HUMAN Transcription factor AP-4 OS=Homo sapiens GN=TFAP4 PE=1 SV=2 0.995676 23.6224 6.0846E-07 149.09 124.3 149.09 1 S QNTQLKRFIQELSGSSPKRRRAEDKDEGIGS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPXXXXXXXXXXXX FIQELSGS(0.004)S(0.996)PK FIQELS(-81.99)GS(-23.62)S(23.62)PK 9 3 -0.082472 24143 0 0 13197 0 0 25708 0 0 13858 0 0 13543 0 0 22854 0 0 15240 0 0 17634 0 0 15733 0 0 8974.6 0 0 22852 0 0 12471 0 0 25651 0 0 14333 0 0 14486 0 0 22457 0 0 15445 0 0 18161 0 0 15502 0 0 8858.8 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 161450000 161450000 0 0 NaN 1358 841 124 124 1279;1280 1348;1349 1450;1451 1609;1610 1450 1609 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19381 1450 1609 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19381 1450 1609 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19381 Q01804 443 Q01804 Q01804 OTU domain-containing protein 4 OTUD4 sp|Q01804|OTUD4_HUMAN OTU domain-containing protein 4 OS=Homo sapiens GN=OTUD4 PE=1 SV=4 0.999999 59.9411 6.44888E-05 129.29 96.361 129.29 1 S EDFDHTSRESNYFGLSPEERREKQAIEESRL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX ESNYFGLS(1)PEER ES(-59.94)NY(-69.19)FGLS(59.94)PEER 8 2 -1.1156 10438 0 0 13221 0 0 11164 0 0 12483 0 0 9565 0 0 11499 0 0 10277 0 0 12420 0 0 13614 0 0 37500 0 0 9880 0 0 12485 0 0 11182 0 0 12847 0 0 9814.2 0 0 11652 0 0 10518 0 0 13552 0 0 13291 0 0 35599 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9414500 9414500 0 0 NaN 1359 842 443 443 1159 1220 1317 1456 1317 1456 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16790 1317 1456 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16790 1317 1456 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16790 Q01813 386 Q01813 Q01813 ATP-dependent 6-phosphofructokinase, platelet type PFKP sp|Q01813|PFKAP_HUMAN ATP-dependent 6-phosphofructokinase, platelet type OS=Homo sapiens GN=PFKP PE=1 SV=2 1 83.8055 9.35052E-05 115.53 80.64 115.53 1 S MDERRFQDAVRLRGRSFAGNLNTYKRLAIKL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX GRS(1)FAGNLNTYK GRS(83.81)FAGNLNT(-83.81)Y(-98.39)K 3 3 -0.81542 12104 0 0 7700.5 0 0 13839 0 0 7721.4 0 0 7550 0 0 14111 0 0 7285.1 0 0 9353.8 0 0 7212.5 0 0 4206.8 0 0 11460 0 0 7274.5 0 0 13758 0 0 8029.5 0 0 8029.3 0 0 13807 0 0 7426.3 0 0 9693.7 0 0 7119.7 0 0 4177.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16171000 16171000 0 0 NaN 1360 843 386 386 1592 1678 1814 2015 1814 2015 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13984 1814 2015 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13984 1814 2015 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13984 Q01826 47 Q01826 Q01826 DNA-binding protein SATB1 SATB1 sp|Q01826|SATB1_HUMAN DNA-binding protein SATB1 OS=Homo sapiens GN=SATB1 PE=1 SV=1 0.929637 11.2097 0.00175073 111.46 18.617 111.46 1 S RLEQNGSPLGRGRLGSTGAKMQGVPLKHSGH X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX LGS(0.93)T(0.07)GAK LGS(11.21)T(-11.21)GAK 3 2 -0.25196 201560 0 0 23142 0 0 191710 0 0 21242 0 0 23587 0 0 188480 0 0 30930 0 0 76172 0 0 22635 0 0 5099.8 0 0 190690 0 0 21851 0 0 191560 0 0 24614 0 0 33958 0 0 180060 0 0 30904 0 0 80912 0 0 22686 0 0 6565 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 587260000 587260000 0 0 NaN 1361 844 47 47 1586;2391 1671;2528 1806;2721 2007;3039 2721 3039 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10407 2721 3039 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10407 2721 3039 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10407 Q01826 38 Q01826 Q01826 DNA-binding protein SATB1 SATB1 sp|Q01826|SATB1_HUMAN DNA-binding protein SATB1 OS=Homo sapiens GN=SATB1 PE=1 SV=1 1 113.817 0.000300865 113.82 78.884 113.82 1 S PKGPPAKIARLEQNGSPLGRGRLGSTGAKMQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX LEQNGS(1)PLGR LEQNGS(113.82)PLGR 6 2 -1.4188 43329 0 0 12672 0 0 41461 0 0 13808 0 0 15167 0 0 41520 0 0 17107 0 0 22059 0 0 13039 0 0 9429.9 0 0 40993 0 0 11977 0 0 41538 0 0 14554 0 0 16967 0 0 40154 0 0 17209 0 0 23165 0 0 13038 0 0 9389.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 38115000 38115000 0 0 NaN 1362 844 38 38 2336 2469 2658 2970 2658 2970 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11300 2658 2970 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11300 2658 2970 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11300 Q01850 309 Q01850 Q01850 Cerebellar degeneration-related protein 2 CDR2 sp|Q01850|CDR2_HUMAN Cerebellar degeneration-related protein 2 OS=Homo sapiens GN=CDR2 PE=1 SV=2 0.332749 0 9.48509E-23 261.66 187.04 261.66 S MFLTVPESHRKPLKRSSSETILSSLAGSDIV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.333)S(0.333)S(0.333)ET(0.002)ILSSLAGSDIVK S(0)S(0)S(0)ET(-22.78)ILS(-108.43)S(-143.23)LAGS(-227.38)DIVK 1 3 -0.49706 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1363 845 309 309 4419 4708 5012 5560 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23316 5012 5560 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23316 5012 5560 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23316 Q01850 310 Q01850 Q01850 Cerebellar degeneration-related protein 2 CDR2 sp|Q01850|CDR2_HUMAN Cerebellar degeneration-related protein 2 OS=Homo sapiens GN=CDR2 PE=1 SV=2 0.332749 0 9.48509E-23 261.66 187.04 261.66 S FLTVPESHRKPLKRSSSETILSSLAGSDIVK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.333)S(0.333)S(0.333)ET(0.002)ILSSLAGSDIVK S(0)S(0)S(0)ET(-22.78)ILS(-108.43)S(-143.23)LAGS(-227.38)DIVK 2 3 -0.49706 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1364 845 310 310 4419 4708 5012 5560 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23316 5012 5560 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23316 5012 5560 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23316 Q01850 311 Q01850 Q01850 Cerebellar degeneration-related protein 2 CDR2 sp|Q01850|CDR2_HUMAN Cerebellar degeneration-related protein 2 OS=Homo sapiens GN=CDR2 PE=1 SV=2 0.332749 0 9.48509E-23 261.66 187.04 261.66 S LTVPESHRKPLKRSSSETILSSLAGSDIVKG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.333)S(0.333)S(0.333)ET(0.002)ILSSLAGSDIVK S(0)S(0)S(0)ET(-22.78)ILS(-108.43)S(-143.23)LAGS(-227.38)DIVK 3 3 -0.49706 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1365 845 311 311 4419 4708 5012 5560 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23316 5012 5560 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23316 5012 5560 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23316 Q01970 1105 Q01970 Q01970 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 PLCB3 sp|Q01970|PLCB3_HUMAN 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Homo sapiens GN=PLCB3 PE=1 SV=2 0.595807 1.68516 0.0445051 53.252 33.989 53.252 1 S EKKELQKILDRKRHNSISEAKMRDKHKKEAE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX HNS(0.596)IS(0.404)EAK HNS(1.69)IS(-1.69)EAK 3 2 1.0385 13617 0 0 11727 0 0 13069 0 0 11918 0 0 16156 0 0 15264 0 0 18507 0 0 15536 0 0 11314 0 0 3096.7 0 0 12883 0 0 11079 0 0 13233 0 0 12279 0 0 16239 0 0 15160 0 0 18528 0 0 15666 0 0 11469 0 0 3275.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10673000 10673000 0 0 NaN 1366 846 1105 1105 1731 1825 1970 2196 1970 2196 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7221 1970 2196 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7221 1970 2196 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7221 Q02040 633 Q02040 Q02040 A-kinase anchor protein 17A AKAP17A sp|Q02040|AK17A_HUMAN A-kinase anchor protein 17A OS=Homo sapiens GN=AKAP17A PE=1 SV=2 0.999999 62.7686 0.000335332 107.93 63.675 107.93 1 S RKERRPHKKHAYKDDSPRRRSTSPDHTRSRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX HAYKDDS(1)PR HAY(-62.77)KDDS(62.77)PR 7 3 0.56546 17963 0 0 13237 0 0 18655 0 0 12490 0 0 16582 0 0 17533 0 0 20217 0 0 16425 0 0 13435 0 0 2712.9 0 0 17000 0 0 12500 0 0 18726 0 0 12951 0 0 16995 0 0 17341 0 0 20219 0 0 16600 0 0 13544 0 0 2934.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 54267000 54267000 0 0 NaN 1367 847 633 633 1699 1792 1936 2157 1936 2157 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5862 1936 2157 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5862 1936 2157 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5862 Q02040 537 Q02040 Q02040 A-kinase anchor protein 17A AKAP17A sp|Q02040|AK17A_HUMAN A-kinase anchor protein 17A OS=Homo sapiens GN=AKAP17A PE=1 SV=2 1 74.6485 0.00993797 74.649 57.43 74.649 1 S CKEVQSSCRVVPEDGSPEKRCPGGVLSCIPD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX VVPEDGS(1)PEKR VVPEDGS(74.65)PEKR 7 3 -0.12161 41605 0 0 33938 0 0 41811 0 0 36599 0 0 34371 0 0 36473 0 0 35543 0 0 33835 0 0 36282 0 0 4620.5 0 0 39369 0 0 32075 0 0 42000 0 0 37414 0 0 35337 0 0 36540 0 0 36144 0 0 34180 0 0 35768 0 0 5133.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 177840000 177840000 0 0 NaN 1368 847 537 537 5309 5657 6033 6705 6033 6705 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9749 6033 6705 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9749 6033 6705 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9749 Q02078 404 Q02078 Q02078 Myocyte-specific enhancer factor 2A MEF2A sp|Q02078|MEF2A_HUMAN Myocyte-specific enhancer factor 2A OS=Homo sapiens GN=MEF2A PE=1 SV=1 0.752678 4.83347 0.0417918 40.725 19.261 40.725 1 S GSNLSINTNQNISIKSEPISPPRDRMTPSGF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPXXXXXX S(0.753)EPIS(0.247)PPRDR S(4.83)EPIS(-4.83)PPRDR 1 3 -0.97403 15335 0 0 12682 0 0 18215 0 0 11761 0 0 15059 0 0 15667 0 0 15242 0 0 13646 0 0 14392 0 0 3439.5 0 0 14522 0 0 11975 0 0 18137 0 0 12195 0 0 15470 0 0 15511 0 0 15483 0 0 13870 0 0 14237 0 0 3554.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11449000 11449000 0 0 NaN 1369 848 404 404 3693 3928 4188 4654 4188 4654 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8275 4188 4654 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8275 4188 4654 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8275 Q02078 255 Q02078 Q02078 Myocyte-specific enhancer factor 2A MEF2A sp|Q02078|MEF2A_HUMAN Myocyte-specific enhancer factor 2A OS=Homo sapiens GN=MEF2A PE=1 SV=1 0.706687 3.83724 0.0498703 40.819 19.204 40.819 1 S GATGANSLGKVMPTKSPPPPGGGNLGMNSRK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPX VMPT(0.292)KS(0.707)PPPPGGGNLGMNS(0.001)R VMPT(-3.84)KS(3.84)PPPPGGGNLGMNS(-27.59)R 6 3 -2.2746 14835 0 0 13572 0 0 14248 0 0 13977 0 0 17227 0 0 14973 0 0 16511 0 0 18840 0 0 14882 0 0 15707 0 0 14035 0 0 12823 0 0 14416 0 0 14342 0 0 17295 0 0 15042 0 0 16796 0 0 19221 0 0 14753 0 0 15226 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17394000 17394000 0 0 NaN 1370 848 255 255 5184 5523 5885 6541 5885 6541 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14336 5885 6541 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14336 5885 6541 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14336 Q02241 902 Q02241 Q02241 Kinesin-like protein KIF23 KIF23 sp|Q02241|KIF23_HUMAN Kinesin-like protein KIF23 OS=Homo sapiens GN=KIF23 PE=1 SV=3 0.993589 21.9062 5.93286E-09 173.09 150.87 173.09 1 S GQSVQFTDIETLKQESPNGSRKRRSSTVAPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX GGGQSVQFTDIETLKQES(0.994)PNGS(0.006)R GGGQS(-149.41)VQFT(-126.47)DIET(-52.95)LKQES(21.91)PNGS(-21.91)R 18 3 0.88961 5038.3 0 0 13537 0 0 5691 0 0 12651 0 0 4390.4 0 0 4565.9 0 0 4381.8 0 0 8937.8 0 0 13361 0 0 25129 0 0 4770 0 0 12783 0 0 5677.1 0 0 12914 0 0 4540.6 0 0 5039.7 0 0 4706.5 0 0 9553 0 0 12802 0 0 23869 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13189000 13189000 0 0 NaN 1371 849 902 902 1436 1513 1622 1792 1622 1792 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17367 1622 1792 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17367 1622 1792 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17367 Q02446 46 Q02446 Q02446 Transcription factor Sp4 SP4 sp|Q02446|SP4_HUMAN Transcription factor Sp4 OS=Homo sapiens GN=SP4 PE=1 SV=2 0.998436 28.1986 6.51338E-08 155.73 135.89 155.73 1 S NNKKPKTSGSQDSQPSPLALLAATCSKIGTP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPPXXXX TSGSQDS(0.002)QPS(0.998)PLALLAATCSK T(-47.3)S(-47.3)GS(-48.08)QDS(-28.2)QPS(28.2)PLALLAAT(-116.75)CS(-125.72)K 10 3 0.91478 3482.3 0 0 4331.3 0 0 4697.3 0 0 4540.5 0 0 3376.5 0 0 5056.6 0 0 4476.7 0 0 4251.8 0 0 5343.5 0 0 16888 0 0 3299.7 0 0 4092.8 0 0 4645.9 0 0 4657.6 0 0 3520.8 0 0 5067.2 0 0 4527.8 0 0 4804.9 0 0 5235.7 0 0 16000 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10818000 10818000 0 0 NaN 1372 850 46 46 4917 5242 5585 6207 5585 6207 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22153 5585 6207 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22153 5585 6207 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22153 Q02539 183 Q02539 Q02539 Histone H1.1 HIST1H1A sp|Q02539|H11_HUMAN Histone H1.1 OS=Homo sapiens GN=HIST1H1A PE=1 SV=3 1 50.2923 0.0307035 50.292 24.25 50.292 1 S NPKKPKTVKPKKVAKSPAKAKAVKPKAAKAR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX VAKS(1)PAK VAKS(50.29)PAK 4 3 -0.18314 64307 0 0 33492 0 0 30240 0 0 17773 0 0 11638 0 0 57340 0 0 26098 0 0 54243 0 0 19447 0 0 2516.3 0 0 60723 0 0 31549 0 0 32208 0 0 19844 0 0 13107 0 0 55674 0 0 25689 0 0 54606 0 0 19471 0 0 3624.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 40428000 40428000 0 0 NaN 1373 851 183 183 5045 5379 5731 6370 5731 6370 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8516 5731 6370 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8516 5731 6370 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8516 Q02543 123 Q02543 Q02543 60S ribosomal protein L18a RPL18A sp|Q02543|RL18A_HUMAN 60S ribosomal protein L18a OS=Homo sapiens GN=RPL18A PE=1 SV=2 1 104.795 0.000858746 104.79 77.665 104.79 1 S QCYRDMGARHRARAHSIQIMKVEEIAASKCR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX AHS(1)IQIMK AHS(104.79)IQIMK 3 3 -0.74994 19366 0 0 13256 0 0 19662 0 0 12031 0 0 12784 0 0 20692 0 0 12979 0 0 15583 0 0 14512 0 0 1836.5 0 0 18326 0 0 12515 0 0 19698 0 0 12567 0 0 13384 0 0 20293 0 0 13244 0 0 15884 0 0 14254 0 0 2090 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23208000 23208000 0 0 NaN 1374 852 123 123 241 256 274 305 274 305 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13379 274 305 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13379 274 305 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13379 Q02543 71 Q02543 Q02543 60S ribosomal protein L18a RPL18A sp|Q02543|RL18A_HUMAN 60S ribosomal protein L18a OS=Homo sapiens GN=RPL18A PE=1 SV=2 1 196.463 9.8987E-17 246 212.16 246 1 S KSSGEIVYCGQVFEKSPLRVKNFGIWLRYDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX SSGEIVYCGQVFEKS(1)PLR S(-214.22)S(-214.22)GEIVY(-196.46)CGQVFEKS(196.46)PLR 15 3 0.11107 17944 0 0 29101 0 0 19854 0 0 27291 0 0 21535 0 0 19224 0 0 24892 0 0 25387 0 0 29806 0 0 89965 0 0 16986 0 0 27480 0 0 19909 0 0 28003 0 0 21807 0 0 19876 0 0 25311 0 0 27937 0 0 29201 0 0 85301 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 109960000 109960000 0 0 NaN 1375 852 71 71 2229;4345 2357;4631 2538;4934 2835;5478 4934 5478 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17807 4934 5478 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17807 4934 5478 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17807 Q02790 453 Q02790 Q02790 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed FKBP4 sp|Q02790|FKBP4_HUMAN Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Homo sapiens GN=FKBP4 PE=1 SV=3 0.759551 5.0063 3.81824E-11 209.19 184.72 209.19 1 S TEMKEEQKSNTAGSQSQVETEA_________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPXXXXXXXXX SNTAGS(0.24)QS(0.76)QVETEA S(-37.83)NT(-31.98)AGS(-5.01)QS(5.01)QVET(-109.2)EA 8 2 -0.12035 6825 0 0 5968.1 0 0 7016.5 0 0 6524.7 0 0 14349 0 0 7277.9 0 0 17136 0 0 11636 0 0 7024.8 0 0 3461.8 0 0 6459 0 0 5641.1 0 0 7149.3 0 0 6677.5 0 0 14159 0 0 7322.5 0 0 17032 0 0 11607 0 0 7360.2 0 0 3529 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 206030000 206030000 0 0 NaN 1376 854 453 453 4070 4340 4630 5143 4630 5143 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7669 4630 5143 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7669 4630 5143 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7669 Q02880 1550 Q02880 Q02880 DNA topoisomerase 2-beta TOP2B sp|Q02880|TOP2B_HUMAN DNA topoisomerase 2-beta OS=Homo sapiens GN=TOP2B PE=1 SV=3 0.999989 49.5865 4.43861E-16 237.14 210.59 57.484 1;2 S TTPKGKGRGAKKRKASGSENEGDYNPGRKTS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX KAS(1)GS(1)ENEGDYNPGRK KAS(49.59)GS(46.43)ENEGDY(-46.43)NPGRK 3 4 1.092 61219 16862 0 20578 15809 0 65396 18121 0 23009 13919 0 38995 20722 0 63158 17506 0 40593 20701 0 47214 17978 0 25793 15534 0 7030 7588.2 0 57944 15960 0 19453 14924 0 65289 18207 0 24121 14465 0 41140 20870 0 61328 17408 0 40838 20931 0 48188 18244 0 26078 15547 0 7712.2 7561.2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 191250000 165110000 26140000 0 NaN 1377 855 1550 1550 459;460;2011;2012 489;490;2126;2127;2128;2129 2291;2292;2293;2294 2558;2559;2560;2561 2294 2561 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8940 2291 2558 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7424 2291 2558 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7424 Q02880 1552 Q02880 Q02880 DNA topoisomerase 2-beta TOP2B sp|Q02880|TOP2B_HUMAN DNA topoisomerase 2-beta OS=Homo sapiens GN=TOP2B PE=1 SV=3 0.999998 57.3676 2.78174E-31 298.7 265.84 298.7 1;2 S PKGKGRGAKKRKASGSENEGDYNPGRKTSKT X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPXXXX ASGS(1)ENEGDYNPGR AS(-57.37)GS(57.37)ENEGDY(-134.8)NPGR 4 2 0.28016 36396 16862 0 40094 15809 0 36388 18121 0 41742 13919 0 93980 20722 0 40176 17506 0 101140 20701 0 62484 17978 0 48159 15534 0 6791.9 7588.2 0 34440 15960 0 37885 14924 0 37360 18207 0 42734 14465 0 92022 20870 0 40633 17408 0 101160 20931 0 62016 18244 0 49765 15547 0 7841.5 7561.2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 115560000 89422000 26140000 0 NaN 1378 855 1552 1552 459;460;2011;2012 489;490;2126;2127;2128;2129 526;527;2292;2294 590;591;2559;2561 526 590 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7141 526 590 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7141 526 590 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7141 Q02880 1581 Q02880 Q02880 DNA topoisomerase 2-beta TOP2B sp|Q02880|TOP2B_HUMAN DNA topoisomerase 2-beta OS=Homo sapiens GN=TOP2B PE=1 SV=3 0.997019 26.0939 5.45858E-08 164.14 138.93 138.84 1 S KTTSKKPKKTSFDQDSDVDIFPSDFPTEPPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPPP KT(0.001)S(0.002)FDQDS(0.997)DVDIFPSDFPTEPPSLPR KT(-32.76)S(-26.09)FDQDS(26.09)DVDIFPS(-57.9)DFPT(-83.78)EPPS(-100.84)LPR 8 3 -0.56934 7484.6 0 0 7560.3 0 0 6732.3 0 0 8249.1 0 0 7745.8 0 0 8157.1 0 0 8665.2 0 0 12361 0 0 9296.2 0 0 122200 0 0 7079.5 0 0 7145.9 0 0 6836.4 0 0 8426.4 0 0 7814.3 0 0 8463.2 0 0 8793.5 0 0 15918 0 0 9145.8 0 0 115360 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 80739000 80739000 0 0 NaN 1379 855 1581 1581 2251 2379 2560;2561 2858;2859 2561 2859 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23133 2560 2858 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22925 2560 2858 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22925 Q02880 1441 Q02880 Q02880 DNA topoisomerase 2-beta TOP2B sp|Q02880|TOP2B_HUMAN DNA topoisomerase 2-beta OS=Homo sapiens GN=TOP2B PE=1 SV=3 0.934633 11.6291 4.49653E-07 148.44 124.61 148.44 1 S GKSKATPEKSLHDKKSQDFGNLFSFPSYSQK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.935)QDFGNLFS(0.064)FPS(0.001)YSQK S(11.63)QDFGNLFS(-11.63)FPS(-29.6)Y(-54.7)S(-39.32)QK 1 3 -1.1823 11978 0 0 11036 0 0 18493 0 0 10450 0 0 19123 0 0 15979 0 0 24681 0 0 21272 0 0 11613 0 0 58638 0 0 11359 0 0 10422 0 0 18265 0 0 10854 0 0 19435 0 0 15946 0 0 24498 0 0 22899 0 0 12013 0 0 55707 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 65341000 65341000 0 0 NaN 1380 855 1441 1441 4219 4497 4793 5319 4793 5319 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23644 4793 5319 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23644 4793 5319 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23644 Q02880 1613 Q02880 Q02880 DNA topoisomerase 2-beta TOP2B sp|Q02880|TOP2B_HUMAN DNA topoisomerase 2-beta OS=Homo sapiens GN=TOP2B PE=1 SV=3 1 169.829 1.33779E-27 266.89 251.51 259.1 1 S PRTGRARKEVKYFAESDEEEDDVDFAMFN__ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPXX YFAES(1)DEEEDDVDFAMFN Y(-169.83)FAES(169.83)DEEEDDVDFAMFN 5 2 3.9953 17662 0 0 20204 0 0 18590 0 0 18974 0 0 19320 0 0 18486 0 0 21787 0 0 27450 0 0 19485 0 0 337560 0 0 16716 0 0 19079 0 0 18679 0 0 19549 0 0 19595 0 0 19299 0 0 21996 0 0 37358 0 0 19324 0 0 318490 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 112860000 112860000 0 0 NaN 1381 855 1613 1613 5371 5721;5722 6100;6101;6102;6103 6779;6780;6781;6782;6783 6103 6783 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24259 6102 6782 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24142 6103 6783 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24259 Q03111 292 Q03111 Q03111 Protein ENL MLLT1 sp|Q03111|ENL_HUMAN Protein ENL OS=Homo sapiens GN=MLLT1 PE=1 SV=2 0.974926 17.0727 0.0215056 58.275 40.466 58.275 1 S PPPPRASSKRPATADSPKPSAKKQKKSSSKG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPXXXXXXXXX RPAT(0.006)ADS(0.975)PKPS(0.019)AK RPAT(-22.15)ADS(17.07)PKPS(-17.07)AK 7 4 -0.4385 17422 0 0 17315 0 0 20591 0 0 18100 0 0 14365 0 0 19631 0 0 16145 0 0 18409 0 0 18248 0 0 0 0 0 16498 0 0 16361 0 0 20479 0 0 18561 0 0 14973 0 0 19594 0 0 16406 0 0 18513 0 0 17916 0 0 0 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 31235000 31235000 0 0 NaN 1382 856 292 292 3378 3586 3826 4249 3826 4249 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7174 3826 4249 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7174 3826 4249 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7174 Q03111 475 Q03111 Q03111 Protein ENL MLLT1 sp|Q03111|ENL_HUMAN Protein ENL OS=Homo sapiens GN=MLLT1 PE=1 SV=2 0.999805 37.1624 0.00621202 81.625 56.831 71.548 1 S PQKPPPPNSKVSGRRSPESCSKPEKILKKGT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPXXXXXX RS(1)PESCSKPEK RS(37.16)PES(-37.16)CS(-55.43)KPEK 2 4 0.5208 60350 0 0 41081 0 0 60169 0 0 38567 0 0 42361 0 0 54514 0 0 48090 0 0 53716 0 0 45017 0 0 4511.4 0 0 57106 0 0 38794 0 0 60390 0 0 40009 0 0 44118 0 0 53929 0 0 48593 0 0 54048 0 0 44549 0 0 5491.3 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 208110000 208110000 0 0 NaN 1383 856 475 475 3478;4094 3695;4365 3941;4655 4377;5168 3941 4377 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6907 4655 5168 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8197 4655 5168 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8197 Q03164 3036 Q03164 Q03164 Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 KMT2A sp|Q03164|KMT2A_HUMAN Histone-lysine N-methyltransferase 2A OS=Homo sapiens GN=KMT2A PE=1 SV=5 0.999364 31.9639 7.55126E-08 152.5 136.01 152.5 1 S DLTRNSSTPGLQVPVSPTVPIQNQKYVPNST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPPPXXXXXX NSSTPGLQVPVS(0.999)PT(0.001)VPIQNQK NS(-100.68)S(-101.02)T(-95.6)PGLQVPVS(31.96)PT(-31.96)VPIQNQK 12 3 0.62336 4144 0 0 9750.3 0 0 5958.1 0 0 11892 0 0 5550.2 0 0 4742.9 0 0 6416.6 0 0 7670.1 0 0 12320 0 0 14635 0 0 3928.1 0 0 9223 0 0 5891.8 0 0 11965 0 0 5674.3 0 0 5137.4 0 0 6651.7 0 0 8021.2 0 0 11906 0 0 13958 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 35278000 35278000 0 0 NaN 1384 857 3036 3036 2944 3123 3344 3708 3344 3708 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17991 3344 3708 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17991 3344 3708 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17991 Q03188 73 Q03188 Q03188 Centromere protein C CENPC sp|Q03188|CENPC_HUMAN Centromere protein C OS=Homo sapiens GN=CENPC PE=1 SV=2 0.905177 9.79827 1.97084E-07 164.62 131.32 164.62 1 S SVPNSTRKIKDTCIQSPSKECQKSHPKSVPV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPXXXXXXXX DTCIQS(0.905)PS(0.095)KECQK DT(-58.24)CIQS(9.8)PS(-9.8)KECQK 6 3 2.0087 41754 0 0 57255 0 0 44135 0 0 54574 0 0 39361 0 0 46024 0 0 40096 0 0 49176 0 0 64729 0 0 106790 0 0 39519 0 0 54072 0 0 44247 0 0 56061 0 0 40259 0 0 46755 0 0 41454 0 0 52423 0 0 62823 0 0 101690 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30196000 30196000 0 0 NaN 1385 858 73 73 823 871 927 1022 927 1022 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9636 927 1022 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9636 927 1022 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9636 Q03188 538 Q03188 Q03188 Centromere protein C CENPC sp|Q03188|CENPC_HUMAN Centromere protein C OS=Homo sapiens GN=CENPC PE=1 SV=2 0.999994 55.2803 7.3594E-23 272.74 233.93 272.74 1 S ISRRPSDWWVVKSEESPVYSNSSVRNELPMH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX SEES(1)PVYSNSSVR S(-62.67)EES(55.28)PVY(-106.08)S(-55.54)NS(-55.28)S(-77.01)VR 4 2 -0.89797 10680 0 0 10798 0 0 10853 0 0 9959.6 0 0 12544 0 0 10457 0 0 13399 0 0 12603 0 0 12636 0 0 3965.8 0 0 10107 0 0 10196 0 0 10941 0 0 10285 0 0 12641 0 0 10494 0 0 13577 0 0 12678 0 0 12501 0 0 4025.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9544800 9544800 0 0 NaN 1386 858 538 538 3686 3921 4181 4647 4181 4647 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8966 4181 4647 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8966 4181 4647 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8966 Q03188 333 Q03188 Q03188 Centromere protein C CENPC sp|Q03188|CENPC_HUMAN Centromere protein C OS=Homo sapiens GN=CENPC PE=1 SV=2 0.694051 3.55746 9.25993E-12 212.35 176.4 212.35 1 S ITIPRKAGSLKQRTISPAESTALLQGRKSRE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX T(0.306)IS(0.694)PAESTALLQGR T(-3.56)IS(3.56)PAES(-53.45)T(-66.85)ALLQGR 3 2 0.12572 8460.1 0 0 15808 0 0 8039.2 0 0 14346 0 0 6070.2 0 0 6871.3 0 0 4564.2 0 0 8868.5 0 0 15390 0 0 14693 0 0 8003.9 0 0 14925 0 0 8092.3 0 0 14699 0 0 6265.2 0 0 7273.8 0 0 5014.7 0 0 9261.1 0 0 14726 0 0 14041 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14185000 14185000 0 0 NaN 1387 858 333 333 4753 5070 5403 6007 5403 6007 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17808 5403 6007 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17808 5403 6007 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17808 Q03252 17 Q03252 Q03252 Lamin-B2 LMNB2 sp|Q03252|LMNB2_HUMAN Lamin-B2 OS=Homo sapiens GN=LMNB2 PE=1 SV=3 0.981139 17.1628 2.98833E-06 138.35 71.682 138.35 1 S ATPLPGRAGGPATPLSPTRLSRLQEKEELRE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPXXXXXXXXXXXX AGGPATPLS(0.981)PT(0.019)R AGGPAT(-53.39)PLS(17.16)PT(-17.16)R 9 2 0.33167 16438 0 0 23493 0 0 16551 0 0 21762 0 0 18220 0 0 17467 0 0 20035 0 0 18516 0 0 23015 0 0 16739 0 0 15555 0 0 22183 0 0 16683 0 0 22381 0 0 18420 0 0 17745 0 0 20389 0 0 19036 0 0 22582 0 0 16191 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 82213000 82213000 0 0 NaN 1388 859 17 17 203 212 228 256 228 256 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10387 228 256 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10387 228 256 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10387 Q03252 404 Q03252 Q03252 Lamin-B2 LMNB2 sp|Q03252|LMNB2_HUMAN Lamin-B2 OS=Homo sapiens GN=LMNB2 PE=1 SV=3 0.699092 3.77036 3.14021E-10 179.08 157.52 179.08 1 S SSRVTVSRATSSSSGSLSATGRLGRSKRKRL X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPXXXXXXXXX ATSSS(0.006)S(0.293)GS(0.699)LS(0.001)ATGR AT(-74.67)S(-48.43)S(-33.46)S(-20.56)S(-3.77)GS(3.77)LS(-28.4)AT(-63.45)GR 8 2 -0.13123 12150 0 0 10261 0 0 12408 0 0 12569 0 0 8967 0 0 14252 0 0 11984 0 0 12814 0 0 12674 0 0 2739 0 0 11498 0 0 9705.9 0 0 12443 0 0 12792 0 0 9346.2 0 0 14198 0 0 12073 0 0 12991 0 0 12476 0 0 2875.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10600000 10600000 0 0 NaN 1389 859 404 404 540 574 615 687 615 687 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6754 615 687 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6754 615 687 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6754 Q04323 200 Q04323 Q04323 UBX domain-containing protein 1 UBXN1 sp|Q04323|UBXN1_HUMAN UBX domain-containing protein 1 OS=Homo sapiens GN=UBXN1 PE=1 SV=2 0.759949 6.80123 2.70865E-18 240.07 219.36 240.07 1 S SQPPPVAPEPGPVPSSPSQEPPTKREYDQCR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPXXXXXX YGGSVGSQPPPVAPEPGPVPS(0.064)S(0.76)PS(0.159)QEPPT(0.018)KR Y(-199.27)GGS(-184.88)VGS(-169.26)QPPPVAPEPGPVPS(-10.76)S(6.8)PS(-6.8)QEPPT(-16.36)KR 22 4 0.44132 6262.6 0 0 8695.9 0 0 6282 0 0 7243.5 0 0 4844.6 0 0 6695.3 0 0 5456 0 0 6869.3 0 0 7870.6 0 0 9490.3 0 0 5926.1 0 0 8206.4 0 0 6308.1 0 0 7517.2 0 0 5012.1 0 0 6755.6 0 0 5590.5 0 0 7169.6 0 0 7663.5 0 0 9095.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 33306000 33306000 0 0 NaN 1390 860 200 200 5378 5729 6112 6797 6112 6797 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14242 6112 6797 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14242 6112 6797 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14242 Q04637 1238 Q04637 Q04637 Eukaryotic translation initiation factor 4 gamma 1 EIF4G1 sp|Q04637|IF4G1_HUMAN Eukaryotic translation initiation factor 4 gamma 1 OS=Homo sapiens GN=EIF4G1 PE=1 SV=4 1 57.4746 0.0240871 57.475 44.943 57.475 1 S REAALPPVSPLKAALSEEELEKKSKAIIEEY X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX AALS(1)EEELEKK AALS(57.47)EEELEKK 4 3 2.302 13613 0 0 34276 0 0 15865 0 0 28738 0 0 21544 0 0 18141 0 0 20701 0 0 23943 0 0 31310 0 0 8981.4 0 0 12890 0 0 32348 0 0 15913 0 0 29675 0 0 21526 0 0 18747 0 0 21403 0 0 24063 0 0 30444 0 0 9011.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19345000 19345000 0 0 NaN 1391 861 1238 1238 45 48 52 63 52 63 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14518 52 63 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14518 52 63 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14518 Q04637 1231 Q04637 Q04637 Eukaryotic translation initiation factor 4 gamma 1 EIF4G1 sp|Q04637|IF4G1_HUMAN Eukaryotic translation initiation factor 4 gamma 1 OS=Homo sapiens GN=EIF4G1 PE=1 SV=4 1 138.549 1.48802E-06 138.55 114.48 138.55 1 S RGRDAVKREAALPPVSPLKAALSEEELEKKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX EAALPPVS(1)PLK EAALPPVS(138.55)PLK 8 3 -0.077445 37394 0 0 53476 0 0 40575 0 0 50411 0 0 14344 0 0 36962 0 0 16307 0 0 38013 0 0 67709 0 0 5832.5 0 0 35397 0 0 50500 0 0 40357 0 0 51732 0 0 16181 0 0 37674 0 0 17912 0 0 38265 0 0 64629 0 0 6371.7 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 221200000 221200000 0 0 NaN 1392 861 1231 1231 860 912 989 1092;1093;1094 989 1093 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18062 989 1093 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18062 989 1093 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18062 Q04637 314 Q04637 Q04637 Eukaryotic translation initiation factor 4 gamma 1 EIF4G1 sp|Q04637|IF4G1_HUMAN Eukaryotic translation initiation factor 4 gamma 1 OS=Homo sapiens GN=EIF4G1 PE=1 SV=4 0.947918 12.603 6.96977E-44 330.95 303.53 330.95 1 S ESTPISRETGEPYRLSPEPTPLAEPILEVEV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPPPPPP ETGEPYRLS(0.948)PEPT(0.052)PLAEPILEVEVTLSK ET(-45.57)GEPY(-126.46)RLS(12.6)PEPT(-12.6)PLAEPILEVEVT(-171.83)LS(-204.27)K 9 3 0.38673 7524.6 0 0 10077 0 0 7613.5 0 0 10317 0 0 4510.5 0 0 9635.7 0 0 5833.6 0 0 15027 0 0 11804 0 0 311330 0 0 7120.5 0 0 9521.2 0 0 7625.8 0 0 10568 0 0 4784.8 0 0 10343 0 0 6038 0 0 24246 0 0 11393 0 0 293500 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 126050000 126050000 0 0 NaN 1393 861 314 314 1186 1247 1345 1489 1345 1489 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23989 1345 1489 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23989 1345 1489 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23989 Q04637 1077 Q04637 Q04637 Eukaryotic translation initiation factor 4 gamma 1 EIF4G1 sp|Q04637|IF4G1_HUMAN Eukaryotic translation initiation factor 4 gamma 1 OS=Homo sapiens GN=EIF4G1 PE=1 SV=4 0.930004 11.3553 0.00719723 81.888 59.667 81.888 1 S RPIDTSRLTKITKPGSIDSNNQLFAPGGRLS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPXX IT(0.068)KPGS(0.93)IDS(0.002)NNQLFAPGGR IT(-11.36)KPGS(11.36)IDS(-26.84)NNQLFAPGGR 6 3 0.48421 10035 0 0 9498.4 0 0 9522.9 0 0 9805 0 0 7610.8 0 0 9992.5 0 0 7954.2 0 0 9799.7 0 0 10468 0 0 17166 0 0 9494 0 0 8974.5 0 0 9595.7 0 0 10052 0 0 7843.6 0 0 10038 0 0 8149 0 0 10355 0 0 10222 0 0 16391 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16891000 16891000 0 0 NaN 1394 861 1077 1077 1964 2075 2239 2501 2239 2501 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17376 2239 2501 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17376 2239 2501 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17376 Q04637 1185 Q04637 Q04637 Eukaryotic translation initiation factor 4 gamma 1 EIF4G1 sp|Q04637|IF4G1_HUMAN Eukaryotic translation initiation factor 4 gamma 1 OS=Homo sapiens GN=EIF4G1 PE=1 SV=4 0.995927 23.8826 0.000492007 109.16 76.118 109.16 1 S RGDRLDRARTPATKRSFSKEVEERSRERPSQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(0.996)FS(0.004)KEVEER S(23.88)FS(-23.88)KEVEER 1 2 -0.32557 33621 0 0 41124 0 0 31168 0 0 39745 0 0 21702 0 0 30799 0 0 21075 0 0 31557 0 0 44795 0 0 7845.9 0 0 31805 0 0 38841 0 0 31408 0 0 40749 0 0 22596 0 0 31294 0 0 22133 0 0 31861 0 0 43193 0 0 8118.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 268900000 268900000 0 0 NaN 1395 861 1185 1185 3759 3999 4263 4738 4263 4738 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11406 4263 4738 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11406 4263 4738 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11406 Q04637 1187 Q04637 Q04637 Eukaryotic translation initiation factor 4 gamma 1 EIF4G1 sp|Q04637|IF4G1_HUMAN Eukaryotic translation initiation factor 4 gamma 1 OS=Homo sapiens GN=EIF4G1 PE=1 SV=4 0.594064 1.65375 0.00354571 90.689 42.029 90.689 1 S DRLDRARTPATKRSFSKEVEERSRERPSQPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX S(0.406)FS(0.594)KEVEER S(-1.65)FS(1.65)KEVEER 3 3 -0.50573 52309 0 0 56933 0 0 58991 0 0 52541 0 0 67086 0 0 53201 0 0 78128 0 0 66456 0 0 57514 0 0 2702 0 0 49523 0 0 53758 0 0 59137 0 0 54226 0 0 67738 0 0 53468 0 0 78433 0 0 66228 0 0 57623 0 0 4082.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 227460000 227460000 0 0 NaN 1396 861 1187 1187 3759 3999 4264 4739 4264 4739 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11656 4264 4739 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11656 4264 4739 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11656 Q04656 1463 Q04656 Q04656 Copper-transporting ATPase 1 ATP7A sp|Q04656|ATP7A_HUMAN Copper-transporting ATPase 1 OS=Homo sapiens GN=ATP7A PE=1 SV=3 0.996247 24.2651 0.00870238 78.038 49.232 78.038 1 S PKLGLLDRIVNYSRASINSLLSDKRSLNSVV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPXXXXXX AS(0.996)INS(0.004)LLSDKR AS(24.27)INS(-24.27)LLS(-46.65)DKR 2 3 -0.6369 4266.1 0 0 8821.7 0 0 5027.9 0 0 9131.5 0 0 9191.7 0 0 4218.8 0 0 8425.3 0 0 8525.4 0 0 10624 0 0 2808.6 0 0 4039.7 0 0 8335.3 0 0 5068.5 0 0 9278.1 0 0 9073.1 0 0 4507.3 0 0 8673.3 0 0 8469.3 0 0 10389 0 0 2841.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13314000 13314000 0 0 NaN 1397 862 1463 1463 466 496 533 597 533 597 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17553 533 597 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17553 533 597 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17553 Q04656 1432 Q04656 Q04656 Copper-transporting ATPase 1 ATP7A sp|Q04656|ATP7A_HUMAN Copper-transporting ATPase 1 OS=Homo sapiens GN=ATP7A PE=1 SV=3 0.951263 14.3616 7.80311E-08 159.89 135.29 159.89 2 S SYELPARSQIGQKSPSEISVHVGIDDTSRNS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY) XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.044)PS(0.951)EIS(0.005)VHVGIDDT(0.266)S(0.203)RNS(0.531)PK S(-14.36)PS(14.36)EIS(-22.61)VHVGIDDT(-3.08)S(-4.26)RNS(3.08)PK 3 4 0.34535 0 3216.5 0 0 2892.4 0 0 2530.3 0 0 2661.3 0 0 2375.6 0 0 2933.3 0 0 3234.5 0 0 3090.9 0 0 2965.1 0 0 17374 0 0 3041.1 0 0 2731 0 0 2587.1 0 0 2751 0 0 2431.8 0 0 2962.7 0 0 3243.8 0 0 3617.8 0 0 2937.1 0 0 16431 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 9433100 0 9433100 0 NaN 1398 862 1432 1432 4170 4445 4737 5256 4737 5256 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15337 4737 5256 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15337 4737 5256 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15337 Q04656 1447 Q04656 Q04656 Copper-transporting ATPase 1 ATP7A sp|Q04656|ATP7A_HUMAN Copper-transporting ATPase 1 OS=Homo sapiens GN=ATP7A PE=1 SV=3 0.531039 3.08219 7.80311E-08 159.89 135.29 159.89 2 S SEISVHVGIDDTSRNSPKLGLLDRIVNYSRA Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX S(0.044)PS(0.951)EIS(0.005)VHVGIDDT(0.266)S(0.203)RNS(0.531)PK S(-14.36)PS(14.36)EIS(-22.61)VHVGIDDT(-3.08)S(-4.26)RNS(3.08)PK 18 4 0.34535 0 3216.5 0 0 2892.4 0 0 2530.3 0 0 2661.3 0 0 2375.6 0 0 2933.3 0 0 3234.5 0 0 3090.9 0 0 2965.1 0 0 17374 0 0 3041.1 0 0 2731 0 0 2587.1 0 0 2751 0 0 2431.8 0 0 2962.7 0 0 3243.8 0 0 3617.8 0 0 2937.1 0 0 16431 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 9433100 0 9433100 0 NaN 1399 862 1447 1447 4170 4445 4737 5256 4737 5256 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15337 4737 5256 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15337 4737 5256 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15337 Q04656 270 Q04656 Q04656 Copper-transporting ATPase 1 ATP7A sp|Q04656|ATP7A_HUMAN Copper-transporting ATPase 1 OS=Homo sapiens GN=ATP7A PE=1 SV=3 0.987087 21.2433 3.09712E-16 223.64 198.23 223.64 1 S LKNTPVKSSEGSQQRSPSYTNDSTATFIIDG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.987)PS(0.007)Y(0.005)TNDSTATFIIDGMHCK S(21.24)PS(-21.24)Y(-22.64)T(-38.86)NDS(-67.17)T(-92.6)AT(-115.06)FIIDGMHCK 1 3 -0.27976 3629.5 0 0 6262.9 0 0 3482.6 0 0 6142.2 0 0 3879.1 0 0 3420.7 0 0 4723.7 0 0 5614.4 0 0 5627 0 0 56180 0 0 3433.9 0 0 5915.7 0 0 3521.7 0 0 6270.3 0 0 3925.9 0 0 3683.5 0 0 4792.5 0 0 7239.4 0 0 5513.9 0 0 53030 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21279000 21279000 0 0 NaN 1400 862 270 270 4200 4476 4770 5295 4770 5295 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20426 4770 5295 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20426 4770 5295 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20426 Q04726 286 Q04726 Q04726 Transducin-like enhancer protein 3 TLE3 sp|Q04726|TLE3_HUMAN Transducin-like enhancer protein 3 OS=Homo sapiens GN=TLE3 PE=1 SV=2 0.854962 7.7051 8.46156E-08 160.81 130.09 160.81 1 S NGLDKARSLKKDAPTSPASVASSSSTPSSKT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPX DAPT(0.145)S(0.855)PASVASSSSTPSSK DAPT(-7.71)S(7.71)PAS(-47.39)VAS(-112.55)S(-119.72)S(-119.72)S(-119.72)T(-123.93)PS(-138.15)S(-140.41)K 5 3 -1.1295 21357 0 0 30950 0 0 21906 0 0 28987 0 0 42322 0 0 22387 0 0 47248 0 0 36480 0 0 36882 0 0 26886 0 0 20211 0 0 29227 0 0 22286 0 0 29777 0 0 41803 0 0 22961 0 0 47574 0 0 36856 0 0 36832 0 0 26160 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 167770000 167770000 0 0 NaN 1401 864 286 286 639 681 726 806 726 806 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10948 726 806 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10948 726 806 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10948 Q04726 203 Q04726 Q04726 Transducin-like enhancer protein 3 TLE3 sp|Q04726|TLE3_HUMAN Transducin-like enhancer protein 3 OS=Homo sapiens GN=TLE3 PE=1 SV=2 0.999997 55.079 2.12341E-67 421.22 367.83 421.22 1 S ELDHRERESSANNSVSPSESLRASEKHRGSA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXPPPPPPPPPPPPPPPPPXXXXXXXXX ESSANNSVS(1)PSESLR ES(-172.8)S(-137.54)ANNS(-55.08)VS(55.08)PS(-66.62)ES(-136.11)LR 9 2 -0.55774 20168 0 0 21107 0 0 19955 0 0 19803 0 0 26247 0 0 19701 0 0 28930 0 0 22809 0 0 21035 0 0 5874.6 0 0 19083 0 0 19932 0 0 20188 0 0 20411 0 0 26295 0 0 19802 0 0 29103 0 0 22936 0 0 21090 0 0 6059.5 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 123710000 123710000 0 0 NaN 1402 864 203 203 1116;1164 1175;1225 1264;1322 1390;1461 1322 1461 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9207 1322 1461 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9207 1322 1461 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9207 Q04726 217 Q04726 Q04726 Transducin-like enhancer protein 3 TLE3 sp|Q04726|TLE3_HUMAN Transducin-like enhancer protein 3 OS=Homo sapiens GN=TLE3 PE=1 SV=2 0.999996 54.5992 2.82334E-07 149.52 115.34 149.52 1 S VSPSESLRASEKHRGSADYSMEAKKRKAEEK X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX HRGS(1)ADYSMEAK HRGS(54.6)ADY(-69.05)S(-54.6)MEAK 4 3 1.014 23107 0 0 19261 0 0 23940 0 0 20348 0 0 37150 0 0 23637 0 0 44659 0 0 30289 0 0 21697 0 0 14961 0 0 21868 0 0 18202 0 0 24234 0 0 20879 0 0 37004 0 0 23658 0 0 44470 0 0 30575 0 0 22382 0 0 14789 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 31865000 31865000 0 0 NaN 1403 864 217 217 1738 1832;1833 1977;1978 2203;2204 1978 2204 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8019 1978 2204 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8019 1978 2204 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8019 Q04726 263 Q04726 Q04726 Transducin-like enhancer protein 3 TLE3 sp|Q04726|TLE3_HUMAN Transducin-like enhancer protein 3 OS=Homo sapiens GN=TLE3 PE=1 SV=2 1 157.984 5.9987E-07 157.98 116.58 157.98 2 S LVVDVSNEDPATPRVSPAHSPPENGLDKARS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPXXX VS(1)PAHS(1)PPENGLDK VS(157.98)PAHS(157.98)PPENGLDK 2 3 -2.3896 0 12275 0 0 11490 0 0 13370 0 0 13302 0 0 15052 0 0 12279 0 0 14456 0 0 14394 0 0 12542 0 0 7000.7 0 0 11619 0 0 10865 0 0 13420 0 0 13531 0 0 15165 0 0 12393 0 0 14691 0 0 14568 0 0 12457 0 0 6925.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 25818000 0 25818000 0 NaN 1404 864 263 263 5258 5604 5974 6638 5974 6638 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12090 5974 6638 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12090 5974 6638 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12090 Q04726 267 Q04726 Q04726 Transducin-like enhancer protein 3 TLE3 sp|Q04726|TLE3_HUMAN Transducin-like enhancer protein 3 OS=Homo sapiens GN=TLE3 PE=1 SV=2 1 157.984 5.9987E-07 157.98 116.58 157.98 2 S VSNEDPATPRVSPAHSPPENGLDKARSLKKD X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPXXXXXXX VS(1)PAHS(1)PPENGLDK VS(157.98)PAHS(157.98)PPENGLDK 6 3 -2.3896 0 12275 0 0 11490 0 0 13370 0 0 13302 0 0 15052 0 0 12279 0 0 14456 0 0 14394 0 0 12542 0 0 7000.7 0 0 11619 0 0 10865 0 0 13420 0 0 13531 0 0 15165 0 0 12393 0 0 14691 0 0 14568 0 0 12457 0 0 6925.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 25818000 0 25818000 0 NaN 1405 864 267 267 5258 5604 5974 6638 5974 6638 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12090 5974 6638 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12090 5974 6638 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12090 Q04727 292 Q04727 Q04727 Transducin-like enhancer protein 4 TLE4 sp|Q04727|TLE4_HUMAN Transducin-like enhancer protein 4 OS=Homo sapiens GN=TLE4 PE=1 SV=3 0.999744 35.9241 3.93261E-05 117.62 95.789 117.62 1 S NGLDKTRLLKKDAPISPASIASSSSTPSSKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPX DAPIS(1)PASIASSSSTPSSK DAPIS(35.92)PAS(-35.92)IAS(-81.14)S(-87.53)S(-86.85)S(-93.32)T(-99.32)PS(-104.39)S(-109.13)K 5 3 -0.70792 22929 0 0 13719 0 0 25090 0 0 13411 0 0 9278.2 0 0 27205 0 0 11661 0 0 19935 0 0 16424 0 0 15596 0 0 21705 0 0 12958 0 0 24950 0 0 14010 0 0 10387 0 0 26592 0 0 11886 0 0 20748 0 0 16004 0 0 15147 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29804000 29804000 0 0 NaN 1406 865 292 292 638 680 725 805 725 805 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15762 725 805 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15762 725 805 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15762 Q04727 222 Q04727 Q04727 Transducin-like enhancer protein 4 TLE4 sp|Q04727|TLE4_HUMAN Transducin-like enhancer protein 4 OS=Homo sapiens GN=TLE4 PE=1 SV=3 0.999891 40.4239 0.0113008 66.965 53.001 66.965 1 S VSPSASFRGAEKHRNSADYSSESKKQKTEEK X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX HRNS(1)ADYSSESK HRNS(40.42)ADY(-40.42)S(-51.08)S(-50.57)ES(-58.86)K 4 3 2.6739 4048.2 0 0 2431.7 0 0 4345.2 0 0 4363.5 0 0 2937.9 0 0 5750.6 0 0 3251.8 0 0 4274.9 0 0 4229 0 0 1658.4 0 0 3831.8 0 0 2308.2 0 0 4341.7 0 0 4384.7 0 0 3069.8 0 0 5686.8 0 0 3321.8 0 0 4395.2 0 0 4131.3 0 0 1660.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 3643800 3643800 0 0 NaN 1407 865 222 222 1739 1834 1979 2205 1979 2205 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5642 1979 2205 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5642 1979 2205 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5642 Q04727 208 Q04727 Q04727 Transducin-like enhancer protein 4 TLE4 sp|Q04727|TLE4_HUMAN Transducin-like enhancer protein 4 OS=Homo sapiens GN=TLE4 PE=1 SV=3 0.980859 20.8478 6.29405E-07 159.36 126.94 159.36 1 S NDHQRDRDSIKSSSVSPSASFRGAEKHRNSA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX S(0.008)SS(0.005)VS(0.981)PS(0.005)ASFR S(-20.85)S(-38.83)S(-22.53)VS(20.85)PS(-22.53)AS(-68.13)FR 5 2 -0.59132 33367 0 0 22584 0 0 33767 0 0 21521 0 0 18139 0 0 37524 0 0 19915 0 0 26367 0 0 22981 0 0 8514.4 0 0 31575 0 0 21328 0 0 33791 0 0 22419 0 0 19358 0 0 36774 0 0 20270 0 0 27137 0 0 22545 0 0 8627.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 45578000 45578000 0 0 NaN 1408 865 208 208 4475 4766 5073 5629 5073 5629 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10589 5073 5629 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10589 5073 5629 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10589 Q05209 435 Q05209 Q05209 Tyrosine-protein phosphatase non-receptor type 12 PTPN12 sp|Q05209|PTN12_HUMAN Tyrosine-protein phosphatase non-receptor type 12 OS=Homo sapiens GN=PTPN12 PE=1 SV=3 1 104.795 0.0021653 104.79 35.902 104.79 1 S ESTIEQIDKKLERNLSFEIKKVPLQEGPKSF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX NLS(1)FEIK NLS(104.79)FEIK 3 2 0.079488 27313 0 0 30839 0 0 26386 0 0 31553 0 0 18050 0 0 24711 0 0 19644 0 0 25252 0 0 33290 0 0 7818.5 0 0 25842 0 0 29137 0 0 26524 0 0 32244 0 0 18845 0 0 25096 0 0 20293 0 0 25545 0 0 32269 0 0 7946.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 252850000 252850000 0 0 NaN 1409 868 435 435 2860 3031 3246 3602 3246 3602 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19538 3246 3602 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19538 3246 3602 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19538 Q05519 464 Q05519 Q05519 Serine/arginine-rich splicing factor 11 SRSF11 sp|Q05519|SRS11_HUMAN Serine/arginine-rich splicing factor 11 OS=Homo sapiens GN=SRSF11 PE=1 SV=1 0.998467 28.1491 0.0067395 79.875 48.877 79.875 1 S SPKTKECSVEKGTGDSLRESKVNGDDHHEED Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX GT(0.002)GDS(0.998)LRESK GT(-28.15)GDS(28.15)LRES(-54.16)K 5 3 0.57074 20535 0 0 17430 0 0 20131 0 0 16858 0 0 23678 0 0 21755 0 0 20800 0 0 21471 0 0 20322 0 0 2443.4 0 0 19430 0 0 16462 0 0 20332 0 0 17423 0 0 23777 0 0 21589 0 0 21298 0 0 21622 0 0 20072 0 0 2797.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19953000 19953000 0 0 NaN 1410 870 464 464 1656 1747 1889 2107 1889 2107 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7803 1889 2107 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7803 1889 2107 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7803 Q05519 449 Q05519 Q05519 Serine/arginine-rich splicing factor 11 SRSF11 sp|Q05519|SRS11_HUMAN Serine/arginine-rich splicing factor 11 OS=Homo sapiens GN=SRSF11 PE=1 SV=1 0.996293 24.2939 0.000187744 124.24 99.981 124.24 1 S SEKEKKEEKKPIETGSPKTKECSVEKGTGDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY) XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX KPIET(0.004)GS(0.996)PK KPIET(-24.29)GS(24.29)PK 7 3 -0.21394 66496 0 0 85110 0 0 75650 0 0 80470 0 0 82200 0 0 62766 0 0 95149 0 0 78292 0 0 84097 0 0 7996.7 0 0 62956 0 0 80374 0 0 75753 0 0 82623 0 0 83202 0 0 63913 0 0 95929 0 0 78172 0 0 83447 0 0 9341.8 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2115500000 2115500000 0 0 NaN 1411 870 449 449 2156 2278 2452 2730;2731 2452 2730 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10368 2452 2730 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10368 2452 2730 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10368 Q05519 414 Q05519 Q05519 Serine/arginine-rich splicing factor 11 SRSF11 sp|Q05519|SRS11_HUMAN Serine/arginine-rich splicing factor 11 OS=Homo sapiens GN=SRSF11 PE=1 SV=1 0.791943 5.80511 0.0114698 78.763 49.422 78.763 1 S KKSKDKEKDRERKSESDKDVKQVTRDYDEEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX KS(0.208)ES(0.792)DKDVK KS(-5.81)ES(5.81)DKDVK 4 3 -0.66188 14754 0 0 15631 0 0 15265 0 0 15183 0 0 19164 0 0 15602 0 0 21567 0 0 18140 0 0 15673 0 0 3990.6 0 0 13963 0 0 14763 0 0 15394 0 0 15623 0 0 19246 0 0 15660 0 0 21677 0 0 18218 0 0 15715 0 0 4177.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 40564000 40564000 0 0 NaN 1412 870 414 414 2211 2337 2518 2811 2518 2811 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8398 2518 2811 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8398 2518 2811 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8398 Q05519 207 Q05519 Q05519 Serine/arginine-rich splicing factor 11 SRSF11 sp|Q05519|SRS11_HUMAN Serine/arginine-rich splicing factor 11 OS=Homo sapiens GN=SRSF11 PE=1 SV=1 0.99878 29.1328 5.65601E-07 152.13 126.69 152.13 1 S STVDPKLNHVAAGLVSPSLKSDTSSKEIEEA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPXXXXXXXXXXX LNHVAAGLVS(0.999)PS(0.001)LK LNHVAAGLVS(29.13)PS(-29.13)LK 10 3 0.64888 12894 0 0 22654 0 0 12963 0 0 20773 0 0 13238 0 0 12636 0 0 15518 0 0 14597 0 0 23817 0 0 6062.4 0 0 12201 0 0 21389 0 0 13057 0 0 21313 0 0 13458 0 0 13065 0 0 15914 0 0 14749 0 0 23148 0 0 6046.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 157210000 157210000 0 0 NaN 1413 870 207 207 2476 2615 2809 3136 2809 3136 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17963 2809 3136 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17963 2809 3136 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17963 Q05519 456 Q05519 Q05519 Serine/arginine-rich splicing factor 11 SRSF11 sp|Q05519|SRS11_HUMAN Serine/arginine-rich splicing factor 11 OS=Homo sapiens GN=SRSF11 PE=1 SV=1 0.996534 24.5866 0.00152605 99.531 49.247 99.531 1 S EKKPIETGSPKTKECSVEKGTGDSLRESKVN X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX T(0.003)KECS(0.997)VEK T(-24.59)KECS(24.59)VEK 5 3 -0.36848 90171 0 0 102270 0 0 86561 0 0 93114 0 0 109170 0 0 82358 0 0 116360 0 0 105400 0 0 103590 0 0 3899 0 0 85311 0 0 96559 0 0 87659 0 0 95993 0 0 109550 0 0 83328 0 0 117750 0 0 104950 0 0 102760 0 0 6110.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 184300000 184300000 0 0 NaN 1414 870 456 456 4758 5075 5408 6012 5408 6012 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8379 5408 6012 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8379 5408 6012 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8379 Q05655 645 Q05655 Q05655 Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit PRKCD sp|Q05655|KPCD_HUMAN Protein kinase C delta type OS=Homo sapiens GN=PRKCD PE=1 SV=2 0.998513 28.2778 0.000407232 122.86 80.306 122.86 1 S YSNFDQEFLNEKARLSYSDKNLIDSMDQSAF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX ARLS(0.999)YS(0.001)DK ARLS(28.28)Y(-56.56)S(-28.28)DK 4 3 0.2516 43532 0 0 10708 0 0 41972 0 0 10190 0 0 15688 0 0 40122 0 0 17671 0 0 23338 0 0 10422 0 0 3669.6 0 0 41187 0 0 10112 0 0 42035 0 0 10976 0 0 17493 0 0 38677 0 0 17693 0 0 24171 0 0 10591 0 0 3995.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 176760000 176760000 0 0 NaN 1415 871 645 645 421 450 485 541 485 541 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10341 485 541 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10341 485 541 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10341 Q05655 304 Q05655 Q05655 Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit PRKCD sp|Q05655|KPCD_HUMAN Protein kinase C delta type OS=Homo sapiens GN=PRKCD PE=1 SV=2 0.838439 7.23862 8.07144E-11 188.56 156.68 188.56 1 S EALNQVTQRASRRSDSASSEPVGIYQGFEKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX S(0.158)DS(0.838)AS(0.001)S(0.002)EPVGIYQGFEK S(-7.24)DS(7.24)AS(-28.54)S(-26.14)EPVGIY(-133.55)QGFEK 3 3 1.0981 13239 0 0 6575.9 0 0 13462 0 0 6549.5 0 0 5455.7 0 0 14618 0 0 7928.8 0 0 8487.3 0 0 6143.2 0 0 14559 0 0 12528 0 0 6211.8 0 0 13449 0 0 6856 0 0 6042.4 0 0 14243 0 0 7903.2 0 0 9189.7 0 0 6137.2 0 0 13905 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18812000 18812000 0 0 NaN 1416 871 304 304 3464;3671 3680;3906 4166 4632 4166 4632 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18695 4166 4632 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18695 4166 4632 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18695 Q05655 306 Q05655 Q05655 Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit PRKCD sp|Q05655|KPCD_HUMAN Protein kinase C delta type OS=Homo sapiens GN=PRKCD PE=1 SV=2 0.612972 2.40179 4.37681E-11 197.47 169.57 197.47 1 S LNQVTQRASRRSDSASSEPVGIYQGFEKKTG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPXXX RS(0.019)DS(0.353)AS(0.613)S(0.015)EPVGIYQGFEK RS(-15.04)DS(-2.4)AS(2.4)S(-16.04)EPVGIY(-121.32)QGFEK 6 3 -0.47597 27847 0 0 10500 0 0 31349 0 0 10536 0 0 11749 0 0 32446 0 0 15582 0 0 21426 0 0 10371 0 0 18263 0 0 26364 0 0 9919.5 0 0 31133 0 0 11168 0 0 13129 0 0 31441 0 0 15535 0 0 22469 0 0 10454 0 0 17693 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 56433000 56433000 0 0 NaN 1417 871 306 306 3464;3671 3680;3906 3926 4361 3926 4361 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16677 3926 4361 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16677 3926 4361 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16677 Q06210 261 Q06210 Q06210 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 GFPT1 sp|Q06210|GFPT1_HUMAN Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Homo sapiens GN=GFPT1 PE=1 SV=3 0.787129 5.79905 2.72059E-08 174.47 142.41 174.47 1 S RGKDKKGSCNLSRVDSTTCLFPVEEKAVEYY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX VDS(0.787)T(0.207)T(0.006)CLFPVEEK VDS(5.8)T(-5.8)T(-21.33)CLFPVEEK 3 3 0.99949 13057 0 0 17876 0 0 15793 0 0 19917 0 0 15607 0 0 12580 0 0 16591 0 0 17025 0 0 19731 0 0 9953.7 0 0 12365 0 0 16899 0 0 15745 0 0 20208 0 0 15866 0 0 13011 0 0 16927 0 0 17205 0 0 19335 0 0 9766.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 324300000 324300000 0 0 NaN 1418 875 261 261 5080 5415 5767 6409 5767 6409 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20520 5767 6409 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20520 5767 6409 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20520 Q06265 306 Q06265 Q06265 Exosome complex component RRP45 EXOSC9 sp|Q06265|EXOS9_HUMAN Exosome complex component RRP45 OS=Homo sapiens GN=EXOSC9 PE=1 SV=3 0.93725 11.7424 5.79003E-10 180.17 130.24 180.17 1 S QRITAFKMEKAPIDTSDVEEKAEEIIAEAEP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX APIDT(0.063)S(0.937)DVEEK APIDT(-11.74)S(11.74)DVEEK 6 2 -0.3149 14696 0 0 21309 0 0 14407 0 0 21621 0 0 14956 0 0 13260 0 0 12696 0 0 16552 0 0 23052 0 0 19606 0 0 13905 0 0 20131 0 0 14526 0 0 22046 0 0 15123 0 0 13743 0 0 13315 0 0 17066 0 0 22306 0 0 18845 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10203000 10203000 0 0 NaN 1419 876 306 306 357 383 415 458 415 458 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14830 415 458 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14830 415 458 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14830 Q06413 222 Q06413 Q06413 Myocyte-specific enhancer factor 2C MEF2C sp|Q06413|MEF2C_HUMAN Myocyte-specific enhancer factor 2C OS=Homo sapiens GN=MEF2C PE=1 SV=1 1 63.5129 7.27824E-08 172.95 142.97 172.95 1 S GAGTSAGNGYGNPRNSPGLLVSPGNLNKNMQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPXXX NS(1)PGLLVSPGNLNK NS(63.51)PGLLVS(-63.51)PGNLNK 2 3 0.052205 20612 0 0 14120 0 0 22387 0 0 12633 0 0 9905.6 0 0 21099 0 0 10571 0 0 15900 0 0 14767 0 0 4683.1 0 0 19510 0 0 13330 0 0 22289 0 0 13198 0 0 10803 0 0 20714 0 0 10843 0 0 16291 0 0 14393 0 0 4777.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 179960000 179960000 0 0 NaN 1420 877 222 222 2924 3100 3320 3680 3320 3680 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18272 3320 3680 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18272 3320 3680 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18272 Q06413 396 Q06413 Q06413 Myocyte-specific enhancer factor 2C MEF2C sp|Q06413|MEF2C_HUMAN Myocyte-specific enhancer factor 2C OS=Homo sapiens GN=MEF2C PE=1 SV=1 0.999646 34.5121 0.00733645 77.894 51.956 77.894 1 S SLPSTQSLNIKSEPVSPPRDRTTTPSRYPQH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX SEPVS(1)PPRDR S(-34.51)EPVS(34.51)PPRDR 5 3 -0.4665 12023 0 0 8661.8 0 0 11598 0 0 9499.3 0 0 10423 0 0 11573 0 0 11101 0 0 10993 0 0 10457 0 0 2641.1 0 0 11376 0 0 8187.3 0 0 11690 0 0 9735.8 0 0 10656 0 0 11505 0 0 11250 0 0 11129 0 0 10346 0 0 2741.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17003000 17003000 0 0 NaN 1421 877 396 396 3697 3932 4192 4658 4192 4658 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6892 4192 4658 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6892 4192 4658 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6892 Q06413 240 Q06413 Q06413 Myocyte-specific enhancer factor 2C MEF2C sp|Q06413|MEF2C_HUMAN Myocyte-specific enhancer factor 2C OS=Homo sapiens GN=MEF2C PE=1 SV=1 1 59.0403 0.0204951 62.78 40.288 59.04 1 S LLVSPGNLNKNMQAKSPPPMNLGMNNRKPDL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(1)PPPMNLGMNNR S(59.04)PPPMNLGMNNR 1 2 -1.3185 55447 0 0 37757 0 0 52663 0 0 37658 0 0 38090 0 0 52053 0 0 38365 0 0 43574 0 0 36021 0 0 23109 0 0 52457 0 0 35668 0 0 53011 0 0 38904 0 0 39516 0 0 51470 0 0 38975 0 0 44733 0 0 35642 0 0 22768 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 67159000 67159000 0 0 NaN 1422 877 240 240 4147 4420;4421 4711;4712 5229;5230 4712 5230 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14523 4711 5229 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11936 4711 5229 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11936 Q06587 229 Q06587 Q06587 E3 ubiquitin-protein ligase RING1 RING1 sp|Q06587|RING1_HUMAN E3 ubiquitin-protein ligase RING1 OS=Homo sapiens GN=RING1 PE=1 SV=2 0.98984 19.8869 6.30842E-18 225.74 211.87 225.74 1 S GTGGGGTGGVGGGAGSEDSGDRGGTLGGGTL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPXXXXXXXXX GGGAGGSSVGTGGGGTGGVGGGAGS(0.99)EDS(0.01)GDR GGGAGGS(-176.63)S(-170.63)VGT(-138.03)GGGGT(-90.78)GGVGGGAGS(19.89)EDS(-19.89)GDR 25 3 -0.013364 2331 0 0 1857.7 0 0 2687.9 0 0 1569.6 0 0 1642.8 0 0 2320.9 0 0 2141.8 0 0 2677.2 0 0 2123.5 0 0 4119.7 0 0 2207 0 0 1753.2 0 0 2674.2 0 0 1641.3 0 0 1735.9 0 0 2305 0 0 2155.7 0 0 2795.7 0 0 2096.1 0 0 3941.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10130000 10130000 0 0 NaN 1423 878 229 229 1432 1509 1618 1788 1618 1788 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7116 1618 1788 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7116 1618 1788 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7116 Q06587 38 Q06587 Q06587 E3 ubiquitin-protein ligase RING1 RING1 sp|Q06587|RING1_HUMAN E3 ubiquitin-protein ligase RING1 OS=Homo sapiens GN=RING1 PE=1 SV=2 1 84.4694 4.24867E-12 212.05 175.61 212.05 1 S RTPQEAIMDGTEIAVSPRSLHSELMCPICLD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX TPQEAIMDGTEIAVS(1)PR T(-175.81)PQEAIMDGT(-84.47)EIAVS(84.47)PR 15 3 0.16056 4069 0 0 3904.9 0 0 3098.7 0 0 4563.7 0 0 4544.9 0 0 3146 0 0 3761.8 0 0 4338.5 0 0 4380.8 0 0 6241.4 0 0 3846.7 0 0 3692.5 0 0 3192.2 0 0 4622.9 0 0 4516.3 0 0 3243.4 0 0 3883.7 0 0 4493.7 0 0 4296.3 0 0 5977.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14681000 14681000 0 0 NaN 1424 878 38 38 4836 5161 5500 6118 5500 6118 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18482 5500 6118 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18482 5500 6118 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18482 Q07157 617 Q07157 Q07157 Tight junction protein ZO-1 TJP1 sp|Q07157|ZO1_HUMAN Tight junction protein ZO-1 OS=Homo sapiens GN=TJP1 PE=1 SV=3 0.976871 16.2569 5.90475E-11 197.94 169.31 197.94 1 S WRFRGLRSSKRNLRKSREDLSAQPVQTKFPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX S(0.977)REDLS(0.023)AQPVQTK S(16.26)REDLS(-16.26)AQPVQT(-159.4)K 1 3 -0.66767 18042 0 0 76302 0 0 22508 0 0 78024 0 0 20590 0 0 23462 0 0 23618 0 0 38893 0 0 82804 0 0 8415.9 0 0 17089 0 0 72090 0 0 22389 0 0 79131 0 0 21107 0 0 26162 0 0 25517 0 0 38668 0 0 79193 0 0 8824.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 94983000 94983000 0 0 NaN 1425 880 617 617 4263 4542 4841 5373 4841 5373 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9956 4841 5373 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9956 4841 5373 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9956 Q07352 54 Q07352 Q07352 Zinc finger protein 36, C3H1 type-like 1 ZFP36L1 sp|Q07352|TISB_HUMAN Zinc finger protein 36, C3H1 type-like 1 OS=Homo sapiens GN=ZFP36L1 PE=1 SV=1 0.98878 19.4592 0.0198069 59.864 35.483 59.864 1 S KAVGTPAGGGFPRRHSVTLPSSKFHQNQLLS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX RHS(0.989)VT(0.011)LPSSK RHS(19.46)VT(-19.46)LPS(-49.12)S(-50.68)K 3 3 -0.60879 9707.4 0 0 12219 0 0 10006 0 0 12419 0 0 11611 0 0 11564 0 0 12430 0 0 12036 0 0 13275 0 0 2602.5 0 0 9186.8 0 0 11544 0 0 10080 0 0 12725 0 0 11701 0 0 11640 0 0 12636 0 0 12133 0 0 13063 0 0 2729.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8035100 8035100 0 0 NaN 1426 881 54 54 3266 3464 3701 4110 3701 4110 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8793 3701 4110 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8793 3701 4110 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8793 Q07866 521 Q07866 Q07866 Kinesin light chain 1 KLC1 sp|Q07866|KLC1_HUMAN Kinesin light chain 1 OS=Homo sapiens GN=KLC1 PE=1 SV=2 0.999927 41.3712 2.89647E-10 185.3 129.87 185.3 1 S VAEVLNDPENMEKRRSRESLNVDVVKYESGP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPXXXXX S(1)RESLNVDVVK S(41.37)RES(-41.37)LNVDVVK 1 3 0.91628 15680 0 0 14280 0 0 17474 0 0 14527 0 0 19270 0 0 18082 0 0 20891 0 0 18060 0 0 14741 0 0 2719.7 0 0 14844 0 0 13491 0 0 17518 0 0 14958 0 0 19466 0 0 17971 0 0 21019 0 0 18198 0 0 14806 0 0 2978.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 118870000 118870000 0 0 NaN 1427 882 521 521 4264 4543 4842 5374 4842 5374 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14278 4842 5374 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14278 4842 5374 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14278 Q07866 460 Q07866 Q07866 Kinesin light chain 1 KLC1 sp|Q07866|KLC1_HUMAN Kinesin light chain 1 OS=Homo sapiens GN=KLC1 PE=1 SV=2 0.999791 36.7972 1.19615E-14 213.77 142.83 213.77 1 S SFGEYGGWYKACKVDSPTVTTTLKNLGALYR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX VDS(1)PTVTTTLK VDS(36.8)PT(-36.8)VT(-68.69)T(-91.38)T(-100.53)LK 3 2 0.43683 18943 0 0 31892 0 0 18986 0 0 31257 0 0 23654 0 0 18208 0 0 22569 0 0 26168 0 0 34652 0 0 18139 0 0 17925 0 0 30124 0 0 19171 0 0 31923 0 0 23725 0 0 18967 0 0 23356 0 0 26487 0 0 33679 0 0 17686 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20252000 20252000 0 0 NaN 1428 882 460 460 5079 5414 5766 6408 5766 6408 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15165 5766 6408 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15165 5766 6408 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15165 Q07889 1275 Q07889 Q07889 Son of sevenless homolog 1 SOS1 sp|Q07889|SOS1_HUMAN Son of sevenless homolog 1 OS=Homo sapiens GN=SOS1 PE=1 SV=1 0.999999 60.1319 6.65165E-18 232.18 213.41 232.18 1 S PPQTPSPHGTRRHLPSPPLTQEVDLHSIAGP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP HLPS(1)PPLTQEVDLHSIAGPPVPPR HLPS(60.13)PPLT(-60.13)QEVDLHS(-172.92)IAGPPVPPR 4 4 0.44022 6349.2 0 0 6388 0 0 6481.7 0 0 7198.4 0 0 11927 0 0 6538 0 0 12455 0 0 9410.7 0 0 6935.8 0 0 11925 0 0 6008.5 0 0 6039.1 0 0 6586.8 0 0 7331 0 0 11785 0 0 6641.4 0 0 12502 0 0 9687.6 0 0 7077.7 0 0 11447 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 32675000 32675000 0 0 NaN 1429 883 1275 1275 1726 1820 1965 2190;2191 1965 2190 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19349 1965 2190 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19349 1965 2190 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19349 Q07889 1082 Q07889 Q07889 Son of sevenless homolog 1 SOS1 sp|Q07889|SOS1_HUMAN Son of sevenless homolog 1 OS=Homo sapiens GN=SOS1 PE=1 SV=1 0.999562 33.8979 9.45048E-11 184.32 167.58 184.32 1 S RIPESETESTASAPNSPRTPLTPPPASGASS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX IPESETESTASAPNS(1)PR IPES(-90.57)ET(-76.67)ES(-60.25)T(-45.21)AS(-33.9)APNS(33.9)PR 15 3 0.66776 11911 0 0 15861 0 0 12763 0 0 13951 0 0 16938 0 0 11928 0 0 16481 0 0 13419 0 0 13559 0 0 5558.5 0 0 11274 0 0 14972 0 0 12853 0 0 14408 0 0 16933 0 0 12075 0 0 16718 0 0 13570 0 0 13502 0 0 5544.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 34798000 34798000 0 0 NaN 1430 883 1082 1082 1905 2012 2173 2433 2173 2433 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10527 2173 2433 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10527 2173 2433 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10527 Q07889 1167 Q07889 Q07889 Son of sevenless homolog 1 SOS1 sp|Q07889|SOS1_HUMAN Son of sevenless homolog 1 OS=Homo sapiens GN=SOS1 PE=1 SV=1 0.936266 11.7633 1.15363E-06 145.71 120.51 145.71 1 S PVPPRRRPESAPAESSPSKIMSKHLDSPPAI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPXXXXXXXXXXXX RRPESAPAES(0.062)S(0.936)PS(0.001)K RRPES(-59.49)APAES(-11.76)S(11.76)PS(-28.41)K 11 3 -0.86656 3361.2 0 0 5712.3 0 0 3158.5 0 0 6336 0 0 12339 0 0 3262.9 0 0 10879 0 0 6586.2 0 0 6270.4 0 0 2017 0 0 3179.8 0 0 5399.7 0 0 3301.7 0 0 6418.1 0 0 11955 0 0 3453.2 0 0 11017 0 0 6538.4 0 0 6382.4 0 0 2051.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11183000 11183000 0 0 NaN 1431 883 1167 1167 3439 3652 3894 4322 3894 4322 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5794 3894 4322 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5794 3894 4322 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5794 Q07889 1134 Q07889 Q07889 Son of sevenless homolog 1 SOS1 sp|Q07889|SOS1_HUMAN Son of sevenless homolog 1 OS=Homo sapiens GN=SOS1 PE=1 SV=1 0.916705 12.6239 0.0186864 66.393 44.997 66.393 1 S TVFIQVTLPHGPRSASVSSISLTKGTDEVPV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX S(0.009)AS(0.917)VS(0.05)S(0.018)IS(0.006)LTK S(-20.23)AS(12.62)VS(-12.62)S(-16.97)IS(-21.83)LT(-41.05)K 3 2 2.5658 21900 0 0 18635 0 0 21888 0 0 18717 0 0 28328 0 0 20083 0 0 31808 0 0 26387 0 0 21547 0 0 18969 0 0 20723 0 0 17604 0 0 22126 0 0 19235 0 0 28406 0 0 20184 0 0 31929 0 0 26796 0 0 21696 0 0 18472 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20706000 20706000 0 0 NaN 1432 883 1134 1134 3625 3854 4107 4564 4107 4564 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15874 4107 4564 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15874 4107 4564 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15874 Q07889 1210 Q07889 Q07889 Son of sevenless homolog 1 SOS1 sp|Q07889|SOS1_HUMAN Son of sevenless homolog 1 OS=Homo sapiens GN=SOS1 PE=1 SV=1 0.998732 29.7015 0.00770635 80.702 59.104 80.702 1 S RYSISDRTSISDPPESPPLLPPREPVRTPDV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPPXXXX TSIS(0.001)DPPES(0.999)PPLLPPREPVR T(-40.03)S(-40.03)IS(-29.7)DPPES(29.7)PPLLPPREPVR 9 3 0.29727 12922 0 0 14388 0 0 13705 0 0 12457 0 0 17483 0 0 15099 0 0 20162 0 0 16739 0 0 14688 0 0 19361 0 0 12230 0 0 13581 0 0 13806 0 0 12951 0 0 17551 0 0 15074 0 0 20245 0 0 17310 0 0 14725 0 0 18619 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19386000 19386000 0 0 NaN 1433 883 1210 1210 4919 5244 5587 6209 5587 6209 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16484 5587 6209 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16484 5587 6209 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16484 Q07955 234 Q07955 Q07955 Serine/arginine-rich splicing factor 1 SRSF1 sp|Q07955|SRSF1_HUMAN Serine/arginine-rich splicing factor 1 OS=Homo sapiens GN=SRSF1 PE=1 SV=2 0.999882 39.2606 0.0091666 73.082 49.856 73.082 2 S SNSRSRSYSPRRSRGSPRYSPRHSRSRSRT_ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX GS(1)PRY(0.003)S(0.997)PR GS(39.26)PRY(-25.79)S(25.79)PR 2 2 0.2895 0 14256 0 0 16378 0 0 15439 0 0 17524 0 0 13663 0 0 14775 0 0 16153 0 0 15676 0 0 15825 0 0 6935.6 0 0 13495 0 0 15478 0 0 15462 0 0 17879 0 0 14005 0 0 14956 0 0 16314 0 0 15898 0 0 15628 0 0 6893.5 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 33851000 0 33851000 0 NaN 1434 884 234 234 1625;4265 1712;4544 1851;4843 2063;5375 1851 2063 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6354 1851 2063 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6354 4843 5375 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5361 Q07955 238 Q07955 Q07955 Serine/arginine-rich splicing factor 1 SRSF1 sp|Q07955|SRSF1_HUMAN Serine/arginine-rich splicing factor 1 OS=Homo sapiens GN=SRSF1 PE=1 SV=2 0.997373 25.7941 0.0091666 73.082 49.856 73.082 2 S SRSYSPRRSRGSPRYSPRHSRSRSRT_____ X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPXXXXXXXXXX GS(1)PRY(0.003)S(0.997)PR GS(39.26)PRY(-25.79)S(25.79)PR 6 2 0.2895 0 18842 0 0 21169 0 0 21352 0 0 21678 0 0 18261 0 0 19661 0 0 21987 0 0 21123 0 0 21627 0 0 22639 0 0 17839 0 0 20001 0 0 21325 0 0 22195 0 0 18766 0 0 19858 0 0 22192 0 0 21813 0 0 21355 0 0 21806 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 57320000 0 57320000 0 NaN 1435 884 238 238 1625;4265;5434 1712;4544;5787 1851;4843;6178 2063;5375;6875;6876 1851 2063 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6354 1851 2063 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6354 4843 5375 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5361 Q07955 199 Q07955 Q07955 Serine/arginine-rich splicing factor 1 SRSF1 sp|Q07955|SRSF1_HUMAN Serine/arginine-rich splicing factor 1 OS=Homo sapiens GN=SRSF1 PE=1 SV=2 0.999801 37.0082 3.48908E-10 179.56 124.33 179.56 1;2 S EGETAYIRVKVDGPRSPSYGRSRSRSRSRSR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPXXXXXXXXXX VDGPRS(1)PSYGR VDGPRS(37.01)PS(-37.01)Y(-102.44)GR 6 3 -0.10524 88780 104170 0 103680 104720 0 92476 101860 0 91949 98780 0 126550 97374 0 86994 109320 0 137730 105280 0 113220 103830 0 110170 109320 0 6042.8 35188 0 84022 98560 0 97876 98891 0 93343 102660 0 95046 101960 0 126540 99196 0 87760 109110 0 138910 106900 0 112730 105420 0 109870 107700 0 8310.3 35536 0 2 6 0 2 6 0 2 6 0 2 6 0 2 6 0 2 6 0 2 6 0 2 6 0 2 6 0 2 6 0 2340900000 1870200000 470680000 0 NaN 1436 884 199 199 5068;5153 5402;5403;5490;5491 5754;5755;5849;5850;5851;5852 6393;6394;6395;6396;6501;6502;6503;6504 5754 6393 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7266 5754 6393 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7266 5754 6393 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7266 Q07955 201 Q07955 Q07955 Serine/arginine-rich splicing factor 1 SRSF1 sp|Q07955|SRSF1_HUMAN Serine/arginine-rich splicing factor 1 OS=Homo sapiens GN=SRSF1 PE=1 SV=2 0.996504 24.5442 0.0027157 93.424 66.089 83.541 2 S ETAYIRVKVDGPRSPSYGRSRSRSRSRSRSR X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX VDGPRS(0.999)PS(0.997)Y(0.005)GR VDGPRS(29.23)PS(24.54)Y(-24.54)GR 8 2 0.44404 0 104170 0 0 104720 0 0 101860 0 0 98780 0 0 97374 0 0 109320 0 0 105280 0 0 103830 0 0 109320 0 0 35188 0 0 98560 0 0 98891 0 0 102660 0 0 101960 0 0 99196 0 0 109110 0 0 106900 0 0 105420 0 0 107700 0 0 35536 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 470680000 0 470680000 0 NaN 1437 884 201 201 5068;5153 5402;5403;5490;5491 5755;5850;5851;5852 6394;6395;6396;6502;6503;6504 5755 6394 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7606 5850 6502 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9788 5850 6502 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9788 Q07955 242 Q07955 Q07955 Serine/arginine-rich splicing factor 1 SRSF1 sp|Q07955|SRSF1_HUMAN Serine/arginine-rich splicing factor 1 OS=Homo sapiens GN=SRSF1 PE=1 SV=2 0.999984 47.4857 0.0251801 61.48 37.259 61.48 2 S SPRRSRGSPRYSPRHSRSRSRT_________ X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPXXXXXXXXXXXXXX Y(0.09)S(0.91)PRHS(1)R Y(-10.04)S(10.04)PRHS(47.49)R 6 2 -0.73173 0 4585.5 0 0 4791 0 0 5912.3 0 0 4154.6 0 0 4597.9 0 0 4885.9 0 0 5834.5 0 0 5447.1 0 0 5802.8 0 0 15703 0 0 4344 0 0 4522.3 0 0 5863.3 0 0 4316.4 0 0 4761 0 0 4901.3 0 0 5878.7 0 0 5915.2 0 0 5727 0 0 14912 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 23470000 0 23470000 0 NaN 1438 884 242 242 5434 5787 6178 6875;6876 6178 6875 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5276 6178 6875 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5276 6178 6875 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5276 Q07960 49 Q07960 Q07960 Rho GTPase-activating protein 1 ARHGAP1 sp|Q07960|RHG01_HUMAN Rho GTPase-activating protein 1 OS=Homo sapiens GN=ARHGAP1 PE=1 SV=1 0.542064 2.3769 4.28701E-07 154.84 115.63 154.84 1 S PSDEMPDFPKSDDSKSSSPELVTHLKWDDPY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPXXXXX SDDS(0.126)KS(0.542)S(0.314)S(0.018)PELVTHLK S(-31.24)DDS(-6.32)KS(2.38)S(-2.38)S(-14.9)PELVT(-85.07)HLK 6 4 0.062874 9181.5 0 0 6139 0 0 10911 0 0 7090.5 0 0 9167.2 0 0 11258 0 0 8622.9 0 0 9068.9 0 0 7787.2 0 0 3303.9 0 0 8694.6 0 0 5804.7 0 0 10865 0 0 7289.1 0 0 9397.4 0 0 11077 0 0 8780.7 0 0 9281.2 0 0 7719.1 0 0 3320.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14048000 14048000 0 0 NaN 1439 885 49 49 3655;4439 3887;4730 4142 4605 4142 4605 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14015 4142 4605 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14015 4142 4605 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14015 Q07960 51 Q07960 Q07960 Rho GTPase-activating protein 1 ARHGAP1 sp|Q07960|RHG01_HUMAN Rho GTPase-activating protein 1 OS=Homo sapiens GN=ARHGAP1 PE=1 SV=1 0.779089 8.484 1.39801E-10 199.96 156.45 199.96 1 S DEMPDFPKSDDSKSSSPELVTHLKWDDPYYD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX S(0.11)S(0.11)S(0.779)PELVTHLK S(-8.48)S(-8.48)S(8.48)PELVT(-84.62)HLK 3 3 0.26287 24583 0 0 15380 0 0 23336 0 0 16637 0 0 15168 0 0 24822 0 0 14261 0 0 19906 0 0 14780 0 0 2915.1 0 0 23258 0 0 14536 0 0 23468 0 0 17137 0 0 15862 0 0 24458 0 0 14575 0 0 20245 0 0 14562 0 0 3205.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 214750000 214750000 0 0 NaN 1440 885 51 51 3655;4439 3887;4730 5035 5585 5035 5585 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14587 5035 5585 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14587 5035 5585 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14587 Q08170 431 Q08170 Q08170 Serine/arginine-rich splicing factor 4 SRSF4 sp|Q08170|SRSF4_HUMAN Serine/arginine-rich splicing factor 4 OS=Homo sapiens GN=SRSF4 PE=1 SV=2 1 85.3699 1.33799E-07 167.73 140.03 167.73 1 S EHAKSESSQREGRGESENAGTNQETRSRSRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPXXXXX EGRGES(1)ENAGTNQETR EGRGES(85.37)ENAGT(-85.37)NQET(-123.77)R 6 3 0.20857 518.89 0 0 1322.1 0 0 541.81 0 0 1399.5 0 0 2306.8 0 0 383.31 0 0 1770.4 0 0 1898.9 0 0 1160 0 0 542.6 0 0 491.08 0 0 1249.4 0 0 564.85 0 0 1415.9 0 0 2228.6 0 0 449.59 0 0 1811.1 0 0 1862.3 0 0 1170.5 0 0 554.87 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5618200 5618200 0 0 NaN 1441 886 431 431 974 1028 1114 1229 1114 1229 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4958 1114 1229 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4958 1114 1229 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4958 Q08170 179 Q08170 Q08170 Serine/arginine-rich splicing factor 4 SRSF4 sp|Q08170|SRSF4_HUMAN Serine/arginine-rich splicing factor 4 OS=Homo sapiens GN=SRSF4 PE=1 SV=2 1 47.5317 0.0535417 47.532 19.67 47.532 1 S EVNGRKIRLVEDKPGSRRRRSYSRSRSHSRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX LVEDKPGS(1)RR LVEDKPGS(47.53)RR 8 3 -1.9341 10192 0 0 10523 0 0 11102 0 0 13724 0 0 12804 0 0 9654.1 0 0 13292 0 0 10152 0 0 10446 0 0 2898.3 0 0 9647.5 0 0 9958.9 0 0 11148 0 0 13830 0 0 12898 0 0 9870.1 0 0 13429 0 0 10252 0 0 10428 0 0 2964.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9863700 9863700 0 0 NaN 1442 886 179 179 2643 2790 2991 3329 2991 3329 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8968 2991 3329 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8968 2991 3329 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8968 Q08170 458 Q08170 Q08170 Serine/arginine-rich splicing factor 4 SRSF4 sp|Q08170|SRSF4_HUMAN Serine/arginine-rich splicing factor 4 OS=Homo sapiens GN=SRSF4 PE=1 SV=2 0.97498 15.9071 0.00721861 78.285 52.554 78.285 1 S RSRSNSKSKPNLPSESRSRSKSASKTRSRSK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPXXXXXXXXXXXXXX SKPNLPS(0.025)ES(0.975)R S(-65.9)KPNLPS(-15.91)ES(15.91)R 9 3 -0.38512 21968 0 0 33627 0 0 21870 0 0 29540 0 0 43840 0 0 17468 0 0 42429 0 0 35751 0 0 33357 0 0 2984.5 0 0 20787 0 0 31743 0 0 22293 0 0 30386 0 0 43163 0 0 18283 0 0 43008 0 0 35243 0 0 33298 0 0 3637.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 57800000 57800000 0 0 NaN 1443 886 458 458 3894 4149 4428 4922 4428 4922 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9596 4428 4922 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9596 4428 4922 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9596 Q08170 267 Q08170 Q08170 Serine/arginine-rich splicing factor 4 SRSF4 sp|Q08170|SRSF4_HUMAN Serine/arginine-rich splicing factor 4 OS=Homo sapiens GN=SRSF4 PE=1 SV=2 1 47.5317 0.000432035 101.39 72.373 47.532 1;2 S KEKSRSRSHSAGKSRSKSKDQAEEKIQNNDN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPXXXXXX S(1)KS(1)KDQAEEK S(47.53)KS(47.53)KDQAEEK 1 3 0.25028 14861 70875 0 19941 80062 0 15929 70874 0 21910 86033 0 28213 105470 0 12922 66686 0 28518 106700 0 23871 86357 0 21968 91321 0 3507.4 9499.4 0 14067 67066 0 18849 75666 0 16129 71792 0 22232 87661 0 27904 105000 0 13497 67970 0 28835 108130 0 23626 86146 0 21954 90758 0 3855.1 10943 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 71412000 30097000 41316000 0 NaN 1444 886 267 267 3901 4157;4158 4436;4437;4438 4930;4931;4932;4933 4438 4933 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8758 4436 4930 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7447 4436 4930 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7447 Q08170 269 Q08170 Q08170 Serine/arginine-rich splicing factor 4 SRSF4 sp|Q08170|SRSF4_HUMAN Serine/arginine-rich splicing factor 4 OS=Homo sapiens GN=SRSF4 PE=1 SV=2 1 47.5317 0.0167551 62.357 39.554 47.532 2 S KSRSRSHSAGKSRSKSKDQAEEKIQNNDNVG X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX S(1)KS(1)KDQAEEK S(47.53)KS(47.53)KDQAEEK 3 3 0.25028 0 70875 0 0 80062 0 0 70874 0 0 86033 0 0 105470 0 0 66686 0 0 106700 0 0 86357 0 0 91321 0 0 9499.4 0 0 67066 0 0 75666 0 0 71792 0 0 87661 0 0 105000 0 0 67970 0 0 108130 0 0 86146 0 0 90758 0 0 10943 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 41316000 0 41316000 0 NaN 1445 886 269 269 3901 4157;4158 4437;4438 4931;4932;4933 4438 4933 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8758 4437 4932 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8279 4437 4932 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8279 Q08170 316 Q08170 Q08170 Serine/arginine-rich splicing factor 4 SRSF4 sp|Q08170|SRSF4_HUMAN Serine/arginine-rich splicing factor 4 OS=Homo sapiens GN=SRSF4 PE=1 SV=2 0.980364 16.9832 0.015353 71.567 60.354 71.567 1 S RSRSQERRVEEEKRGSVSRGRSQEKSLRQSR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX VEEEKRGS(0.98)VS(0.02)R VEEEKRGS(16.98)VS(-16.98)R 8 3 0.14569 15904 0 0 17419 0 0 16279 0 0 15829 0 0 32445 0 0 15325 0 0 33897 0 0 23565 0 0 20245 0 0 3232.4 0 0 15051 0 0 16446 0 0 16571 0 0 16342 0 0 31979 0 0 15493 0 0 34060 0 0 23415 0 0 20554 0 0 3589 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 58325000 58325000 0 0 NaN 1446 886 316 316 5086 5421 5773 6416 5773 6416 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6600 5773 6416 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6600 5773 6416 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6600 Q08495 26 Q08495 Q08495 Dematin DMTN sp|Q08495|DEMA_HUMAN Dematin OS=Homo sapiens GN=DMTN PE=1 SV=3 0.995127 23.4574 0.00185628 96.666 72.815 96.666 1 S SPGSVSPSRDSSVPGSPSSIVAKMDNQVLGY X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPXXXXXXXX DSSVPGS(0.995)PS(0.004)SIVAK DS(-38.51)S(-38.51)VPGS(23.46)PS(-23.46)S(-39.81)IVAK 7 3 0.54963 4635.3 0 0 9739.1 0 0 5699 0 0 9956.8 0 0 8624.4 0 0 5236 0 0 7902.3 0 0 8610.9 0 0 10855 0 0 3933.4 0 0 4390.2 0 0 9201.4 0 0 5711.9 0 0 10134 0 0 8571.9 0 0 5508.7 0 0 8159.4 0 0 8625.1 0 0 10586 0 0 3903 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12793000 12793000 0 0 NaN 1447 889 26 26 821 869 925 1020 925 1020 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15261 925 1020 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15261 925 1020 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15261 Q08495 333 Q08495 Q08495 Dematin DMTN sp|Q08495|DEMA_HUMAN Dematin OS=Homo sapiens GN=DMTN PE=1 SV=3 1 81.1484 0.00653567 81.148 62.32 81.148 1 S LQNGEGQRGRMDRGNSLPCVLEQKIYPYEML X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX GNS(1)LPCVLEQK GNS(81.15)LPCVLEQK 3 3 -0.16245 3199.8 0 0 6287.6 0 0 3154.1 0 0 7831.3 0 0 11530 0 0 2444.7 0 0 12611 0 0 6664.7 0 0 5461.2 0 0 4014.1 0 0 3027.6 0 0 5948.4 0 0 3283.2 0 0 7860.1 0 0 11215 0 0 2751.3 0 0 12589 0 0 6642.6 0 0 5691.8 0 0 3934 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14496000 14496000 0 0 NaN 1448 889 333 333 1532 1613 1742 1935 1742 1935 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17777 1742 1935 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17777 1742 1935 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17777 Q08495 16 Q08495 Q08495 Dematin DMTN sp|Q08495|DEMA_HUMAN Dematin OS=Homo sapiens GN=DMTN PE=1 SV=3 0.996705 24.9102 4.39201E-07 160.99 102.67 160.99 1 S MERLQKQPLTSPGSVSPSRDSSVPGSPSSIV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX QPLTSPGSVS(0.997)PS(0.003)R QPLT(-90.06)S(-79.39)PGS(-41.11)VS(24.91)PS(-24.91)R 10 2 0.71505 8682.5 0 0 17835 0 0 10396 0 0 17127 0 0 15159 0 0 8659.2 0 0 15234 0 0 15275 0 0 19911 0 0 7748.4 0 0 8222.3 0 0 16844 0 0 10428 0 0 17493 0 0 15107 0 0 9155.1 0 0 15631 0 0 15299 0 0 19448 0 0 7649.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14881000 14881000 0 0 NaN 1449 889 16 16 3102 3290 3520 3903 3520 3903 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10365 3520 3903 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10365 3520 3903 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10365 Q08495 289 Q08495 Q08495 Dematin DMTN sp|Q08495|DEMA_HUMAN Dematin OS=Homo sapiens GN=DMTN PE=1 SV=3 0.978919 19.6843 0.0246486 61.48 39.943 61.48 1 S TPFHTSLHQGTSKSSSLPAYGRTTLSRLQST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX S(0.011)S(0.011)S(0.979)LPAYGR S(-19.68)S(-19.68)S(19.68)LPAY(-45.63)GR 3 2 0.20667 13111 0 0 19869 0 0 14772 0 0 18734 0 0 21407 0 0 15168 0 0 22534 0 0 18795 0 0 21069 0 0 5811.5 0 0 12413 0 0 18763 0 0 14862 0 0 19247 0 0 21347 0 0 15419 0 0 22843 0 0 18887 0 0 20851 0 0 5907.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26711000 26711000 0 0 NaN 1450 889 289 289 4433 4724 5028 5577 5028 5577 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10269 5028 5577 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10269 5028 5577 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10269 Q08495 92 Q08495 Q08495 Dematin DMTN sp|Q08495|DEMA_HUMAN Dematin OS=Homo sapiens GN=DMTN PE=1 SV=3 0.98879 20.3026 1.61836E-10 194.77 148.18 194.77 1 S ELPRSRERSLSPKSTSPPPSPEVWADSRSPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX S(0.001)T(0.009)S(0.989)PPPS(0.001)PEVWADSR S(-30.12)T(-20.3)S(20.3)PPPS(-29.84)PEVWADS(-139.9)R 3 2 -0.49535 5084.5 0 0 10692 0 0 5251.6 0 0 9447.1 0 0 10539 0 0 5608.3 0 0 11476 0 0 8655.8 0 0 9245 0 0 17218 0 0 4811.9 0 0 10093 0 0 5345 0 0 9714.2 0 0 10394 0 0 5863.4 0 0 11576 0 0 9083.1 0 0 9216.7 0 0 16413 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15410000 15410000 0 0 NaN 1451 889 92 92 4525 4824 5139 5707 5139 5707 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15189 5139 5707 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15189 5139 5707 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15189 Q08945 644 Q08945 Q08945 FACT complex subunit SSRP1 SSRP1 sp|Q08945|SSRP1_HUMAN FACT complex subunit SSRP1 OS=Homo sapiens GN=SSRP1 PE=1 SV=1 0.657683 3.95393 0.0392762 59.709 42.63 59.709 2 S KKKKVKVKMEKKSTPSRGSSSKSSSRQLSES X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY) XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX KS(0.413)T(0.59)PS(0.658)RGS(0.275)S(0.053)S(0.011)K KS(-1.64)T(1.64)PS(3.95)RGS(-3.95)S(-10.81)S(-17.39)K 5 3 -1.141 0 8305.4 0 0 9986.8 0 0 9088 0 0 9696.1 0 0 9675.1 0 0 7937.4 0 0 11169 0 0 9820.1 0 0 10694 0 0 4485.9 0 0 7862 0 0 9432.6 0 0 9116.1 0 0 9945.1 0 0 9804.3 0 0 8066.6 0 0 11285 0 0 9912.5 0 0 10572 0 0 4451.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 11766000 0 11766000 0 NaN 1452 890 644 644 2240 2368 2549 2846 2549 2846 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6083 2549 2846 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6083 2549 2846 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6083 Q08945 659 Q08945 Q08945 FACT complex subunit SSRP1 SSRP1 sp|Q08945|SSRP1_HUMAN FACT complex subunit SSRP1 OS=Homo sapiens GN=SSRP1 PE=1 SV=1 0.9958 24.4542 0.00799214 81.017 42.93 75.589 1 S SRGSSSKSSSRQLSESFKSKEFVSSDESSSG Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX QLS(0.001)ES(0.996)FKS(0.004)K QLS(-31.99)ES(24.45)FKS(-24.45)K 5 3 -0.45466 70858 0 0 68133 0 0 70001 0 0 63808 0 0 153420 0 0 60195 0 0 172580 0 0 103990 0 0 63291 0 0 12057 0 0 67047 0 0 64338 0 0 71593 0 0 65722 0 0 150930 0 0 61069 0 0 171760 0 0 102980 0 0 67085 0 0 13760 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 162610000 162610000 0 0 NaN 1453 890 659 659 3072;3073 3258;3259 3486;3487 3862;3863 3487 3863 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13241 3486 3862 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14219 3487 3863 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13241 Q08J23 743 Q08J23 Q08J23 tRNA (cytosine(34)-C(5))-methyltransferase NSUN2 sp|Q08J23|NSUN2_HUMAN tRNA (cytosine(34)-C(5))-methyltransferase OS=Homo sapiens GN=NSUN2 PE=1 SV=2 1 68.6313 4.21681E-18 236.05 218.15 236.05 1 S PDNDVTEGQRAGEPNSPDAEEANSPDVTAGC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP AGEPNS(1)PDAEEANSPDVTAGCDPAGVHPPR AGEPNS(68.63)PDAEEANS(-68.63)PDVT(-120.71)AGCDPAGVHPPR 6 3 -0.2753 3196 0 0 2482.6 0 0 2111.2 0 0 2039.3 0 0 2620 0 0 2639.2 0 0 3493.1 0 0 3829.1 0 0 2623.9 0 0 9709 0 0 3020.1 0 0 2342.7 0 0 2196.1 0 0 2130.6 0 0 2640.3 0 0 2651.8 0 0 3490 0 0 4087.3 0 0 2625.9 0 0 9230.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 44448000 44448000 0 0 NaN 1454 891 743 743 196 205 221 248 221 248 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11796 221 248 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11796 221 248 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11796 Q09161 7 Q09161 Q09161 Nuclear cap-binding protein subunit 1 NCBP1 sp|Q09161|NCBP1_HUMAN Nuclear cap-binding protein subunit 1 OS=Homo sapiens GN=NCBP1 PE=1 SV=1 1 103.865 0.000160554 103.87 75.362 103.87 1 S _________MSRRRHSDENDGGQPHKRRKTS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX RHS(1)DENDGGQPHK RHS(103.87)DENDGGQPHK 3 4 0.072566 4297.5 0 0 4148.7 0 0 5817.3 0 0 4336.8 0 0 3654.5 0 0 5548.4 0 0 3447.9 0 0 4651.7 0 0 5431.1 0 0 7094 0 0 4072.2 0 0 3920.2 0 0 5743.4 0 0 4460.9 0 0 3835.3 0 0 5509.5 0 0 3573.9 0 0 4914.5 0 0 5274.8 0 0 6787.5 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 5474300 5474300 0 0 NaN 1455 893 7 7 3262 3460 3696 4102;4103 3696 4102 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4894 3696 4102 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4894 3696 4102 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4894 Q09328 544 Q09328 Q09328 Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A MGAT5 sp|Q09328|MGT5A_HUMAN Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A OS=Homo sapiens GN=MGAT5 PE=1 SV=1 0.988136 16.8869 0.0527869 40.025 15.089 40.025 2 S ANGCAFLNPKFNPPKSSKNTDFFIGKPTLRE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPXXXXX S(0.988)S(0.591)KNT(0.421)DFFIGK S(16.89)S(1.51)KNT(-1.51)DFFIGK 1 3 2.5104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1456 894 544 544 4360 4644 4948 5493 4948 5493 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23865 4948 5493 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23865 4948 5493 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23865 Q09328 545 Q09328 Q09328 Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A MGAT5 sp|Q09328|MGT5A_HUMAN Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A OS=Homo sapiens GN=MGAT5 PE=1 SV=1 0.591164 1.51354 0.0527869 40.025 15.089 40.025 2 S NGCAFLNPKFNPPKSSKNTDFFIGKPTLREL X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPXXXXXX S(0.988)S(0.591)KNT(0.421)DFFIGK S(16.89)S(1.51)KNT(-1.51)DFFIGK 2 3 2.5104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1457 894 545 545 4360 4644 4948 5493 4948 5493 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23865 4948 5493 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23865 4948 5493 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23865 Q09472 1037 Q09472 Q09472 Histone acetyltransferase p300 EP300 sp|Q09472|EP300_HUMAN Histone acetyltransferase p300 OS=Homo sapiens GN=EP300 PE=1 SV=2 0.621957 2.16258 4.21067E-18 241.94 209.51 241.94 1 S EIKEEEDQPSTSATQSSPAPGQSKKKIFKPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPXXXXXXX TEIKEEEDQPSTSATQS(0.622)S(0.378)PAPGQSK T(-118.73)EIKEEEDQPS(-57.34)T(-48.88)S(-48.88)AT(-45.79)QS(2.16)S(-2.16)PAPGQS(-113.65)K 17 4 -0.82542 12262 0 0 8879.4 0 0 12845 0 0 8796.7 0 0 11395 0 0 13105 0 0 10537 0 0 11139 0 0 9705.7 0 0 6498.3 0 0 11605 0 0 8387.6 0 0 12881 0 0 9106.4 0 0 11637 0 0 12931 0 0 10744 0 0 11446 0 0 9611.9 0 0 6376.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22873000 22873000 0 0 NaN 1458 895 1037 1037 4683 4994 5319 5911 5319 5911 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10672 5319 5911 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10672 5319 5911 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10672 Q09666 5752 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK AHNAK sp|Q09666|AHNK_HUMAN Neuroblast differentiation-associated protein AHNAK OS=Homo sapiens GN=AHNAK PE=1 SV=2 0.985047 18.1873 1.7284E-16 242.59 195.76 242.59 1 S SGSKGDLKSSKASLGSLEGEAEAEASSPKGK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPXX AS(0.015)LGS(0.985)LEGEAEAEASSPK AS(-18.19)LGS(18.19)LEGEAEAEAS(-214.86)S(-218.77)PK 5 3 0.82995 16822 0 0 17619 0 0 19405 0 0 17443 0 0 5151.7 0 0 17181 0 0 3076.2 0 0 13814 0 0 16372 0 0 101820 0 0 15927 0 0 16643 0 0 19213 0 0 17917 0 0 6052.7 0 0 17383 0 0 3595.1 0 0 17055 0 0 15591 0 0 96196 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 62402000 62402000 0 0 NaN 1459 896 5752 5752 473 503 541 605 541 605 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19510 541 605 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19510 541 605 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19510 Q09666 5763 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK AHNAK sp|Q09666|AHNK_HUMAN Neuroblast differentiation-associated protein AHNAK OS=Homo sapiens GN=AHNAK PE=1 SV=2 0.983192 17.6713 1.06159E-11 208.89 189.57 208.89 1 S ASLGSLEGEAEAEASSPKGKFSLFKSKKPRH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX ASLGSLEGEAEAEAS(0.017)S(0.983)PK AS(-187.65)LGS(-183.64)LEGEAEAEAS(-17.67)S(17.67)PK 16 3 -0.39108 9444.2 0 0 7237.2 0 0 9801.9 0 0 7858 0 0 4112.6 0 0 10740 0 0 4085.1 0 0 8065.9 0 0 7230.2 0 0 12042 0 0 8938 0 0 6840.2 0 0 9779.7 0 0 8076.7 0 0 4511.9 0 0 10626 0 0 4245.8 0 0 8557.2 0 0 7000.6 0 0 11526 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20429000 20429000 0 0 NaN 1460 896 5763 5763 473 503 540 604 540 604 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17673 540 604 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17673 540 604 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17673 Q09666 115 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK AHNAK sp|Q09666|AHNK_HUMAN Neuroblast differentiation-associated protein AHNAK OS=Homo sapiens GN=AHNAK PE=1 SV=2 0.999991 50.604 1.89463E-11 189.09 168.66 189.09 1 S WTREVFSSCSSEVVLSGDDEEYQRIYTTKIK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPXXXXXXX EVFSSCSSEVVLS(1)GDDEEYQR EVFS(-96.2)S(-88.47)CS(-65.8)S(-50.6)EVVLS(50.6)GDDEEY(-96.42)QR 13 3 -1.005 8163.4 0 0 11213 0 0 9849.4 0 0 11417 0 0 8732 0 0 11126 0 0 9490 0 0 11454 0 0 12299 0 0 41068 0 0 7731 0 0 10593 0 0 9808.6 0 0 11705 0 0 8940.6 0 0 11246 0 0 9700.6 0 0 12714 0 0 12016 0 0 38935 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 44209000 44209000 0 0 NaN 1461 896 115 115 1212 1275 1374 1524;1525 1374 1524 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16918 1374 1524 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16918 1374 1524 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16918 Q09666 5830 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK AHNAK sp|Q09666|AHNK_HUMAN Neuroblast differentiation-associated protein AHNAK OS=Homo sapiens GN=AHNAK PE=1 SV=2 1 71.1472 0.00037036 107.99 82.056 107.99 1 S GKHGKLKFGTFGGLGSKSKGHYEVTGSDDET X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXPPPPPPPPPPXXXXXXXXXXXXXX FGTFGGLGS(1)K FGT(-71.15)FGGLGS(71.15)K 9 2 2.6381 35412 0 0 13465 0 0 37546 0 0 14939 0 0 5794.3 0 0 35271 0 0 6000.3 0 0 19036 0 0 13500 0 0 17194 0 0 33517 0 0 12729 0 0 37296 0 0 15576 0 0 7764.8 0 0 34275 0 0 6303.3 0 0 20241 0 0 13003 0 0 16631 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17957000 17957000 0 0 NaN 1462 896 5830 5830 1269 1336 1438 1595 1438 1595 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20489 1438 1595 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20489 1438 1595 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20489 Q09666 5110 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK AHNAK sp|Q09666|AHNK_HUMAN Neuroblast differentiation-associated protein AHNAK OS=Homo sapiens GN=AHNAK PE=1 SV=2 1 85.6194 0.00507182 85.619 71.147 85.619 1 S FDIKSPKFKAEAPLPSPKLEGELQAPDLELS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX FKAEAPLPS(1)PK FKAEAPLPS(85.62)PK 9 3 2.6808 55023 0 0 29752 0 0 51657 0 0 29344 0 0 17032 0 0 48549 0 0 18784 0 0 30010 0 0 31241 0 0 6706.9 0 0 52054 0 0 28103 0 0 51789 0 0 30463 0 0 19366 0 0 47586 0 0 19377 0 0 31022 0 0 30297 0 0 7009.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 62087000 62087000 0 0 NaN 1463 896 5110 5110 1284 1353 1455 1614 1455 1614 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16111 1455 1614 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16111 1455 1614 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16111 Q09666 5731 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK AHNAK sp|Q09666|AHNK_HUMAN Neuroblast differentiation-associated protein AHNAK OS=Homo sapiens GN=AHNAK PE=1 SV=2 0.966485 14.6405 9.73908E-11 183.1 155.25 183.1 1 S KFNFSKPKGKGGVTGSPEASISGSKGDLKSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPXXXXXX GKGGVT(0.033)GS(0.966)PEASISGSK GKGGVT(-14.64)GS(14.64)PEAS(-34.9)IS(-56.78)GS(-80.44)K 8 3 -0.12497 72674 0 0 57566 0 0 76159 0 0 57713 0 0 17677 0 0 74213 0 0 14376 0 0 54851 0 0 63141 0 0 16251 0 0 68782 0 0 54382 0 0 75765 0 0 59514 0 0 21391 0 0 73439 0 0 16127 0 0 56259 0 0 60233 0 0 16571 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 227120000 227120000 0 0 NaN 1464 896 5731 5731 1461;1486 1538;1564 1660;1689 1840;1870 1689 1870 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11580 1689 1870 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11580 1689 1870 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11580 Q09666 5841 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK AHNAK sp|Q09666|AHNK_HUMAN Neuroblast differentiation-associated protein AHNAK OS=Homo sapiens GN=AHNAK PE=1 SV=2 0.999289 31.4773 2.83928E-54 364.15 340.59 364.15 1 S GGLGSKSKGHYEVTGSDDETGKLQGSGVSLA X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPPP GHYEVT(0.001)GS(0.999)DDETGKLQGSGVSLASK GHY(-212.97)EVT(-31.48)GS(31.48)DDET(-93.87)GKLQGS(-226.34)GVS(-288.15)LAS(-316.99)K 8 4 0.026526 10767 0 0 10360 0 0 10787 0 0 9387.2 0 0 4850.9 0 0 11597 0 0 5255.6 0 0 8372.9 0 0 11418 0 0 79993 0 0 10188 0 0 9781.3 0 0 10789 0 0 9733.3 0 0 5284.8 0 0 11636 0 0 5499.1 0 0 10934 0 0 11005 0 0 75517 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 70051000 70051000 0 0 NaN 1465 896 5841 5841 1465 1542 1664 1844 1664 1844 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15098 1664 1844 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15098 1664 1844 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15098 Q09666 5780 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK AHNAK sp|Q09666|AHNK_HUMAN Neuroblast differentiation-associated protein AHNAK OS=Homo sapiens GN=AHNAK PE=1 SV=2 0.988477 19.8447 0.0190653 58.21 18.056 58.21 1 S KGKFSLFKSKKPRHRSNSFSDEREFSGPSTP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX HRS(0.988)NS(0.01)FS(0.001)DER HRS(19.84)NS(-19.84)FS(-28.88)DER 3 3 0.79356 1504.4 0 0 1893.5 0 0 2286.7 0 0 1812.1 0 0 1049.5 0 0 2540.1 0 0 1557.4 0 0 2663.5 0 0 1993.7 0 0 3476.1 0 0 1426.5 0 0 1788.3 0 0 2243.4 0 0 1877.3 0 0 1145.7 0 0 2521.7 0 0 1572.9 0 0 2771.6 0 0 1948.7 0 0 3334.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1585200 1585200 0 0 NaN 1466 896 5780 5780 1743;4055;4056 1838;4323;4324 1984 2211 1984 2211 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5216 1984 2211 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5216 1984 2211 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5216 Q09666 5782 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK AHNAK sp|Q09666|AHNK_HUMAN Neuroblast differentiation-associated protein AHNAK OS=Homo sapiens GN=AHNAK PE=1 SV=2 0.904122 10.1109 3.59E-12 188.59 163.52 188.59 1 S KFSLFKSKKPRHRSNSFSDEREFSGPSTPTG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.088)NS(0.904)FS(0.008)DEREFSGPSTPTGTLEFEGGEVSLEGGK S(-10.11)NS(10.11)FS(-20.77)DEREFS(-42.27)GPS(-42.73)T(-41.48)PT(-57.19)GT(-63.69)LEFEGGEVS(-139.4)LEGGK 3 3 -1.531 19510 0 0 20914 0 0 20370 0 0 20234 0 0 6646.8 0 0 19265 0 0 8496.8 0 0 16030 0 0 22799 0 0 36054 0 0 18465 0 0 19753 0 0 20298 0 0 20801 0 0 7595.1 0 0 19381 0 0 8951.8 0 0 17291 0 0 21889 0 0 34321 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 39432000 39432000 0 0 NaN 1467 896 5782 5782 1743;4055;4056 1838;4323;4324 4612;4613 5122;5123 4613 5123 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20406 4613 5123 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20406 4613 5123 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20406 Q09666 5031 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK AHNAK sp|Q09666|AHNK_HUMAN Neuroblast differentiation-associated protein AHNAK OS=Homo sapiens GN=AHNAK PE=1 SV=2 1 64.7115 0.0141964 64.711 38.773 64.711 1 S GKGKKSKFKMPKIHMSGPKIKAKKQGFDLNV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX IHMS(1)GPK IHMS(64.71)GPK 4 3 0.2067 15904 0 0 8290.9 0 0 17119 0 0 7581.9 0 0 3731.2 0 0 14925 0 0 3628.7 0 0 9228.1 0 0 8582.5 0 0 1333.8 0 0 15054 0 0 7828.1 0 0 17004 0 0 7946.1 0 0 4580.2 0 0 14564 0 0 3834.3 0 0 9517.4 0 0 8258.3 0 0 1469.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7582700 7582700 0 0 NaN 1468 896 5031 5031 1850 1953 2110 2364 2110 2364 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11852 2110 2364 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11852 2110 2364 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11852 Q09666 501 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK AHNAK sp|Q09666|AHNK_HUMAN Neuroblast differentiation-associated protein AHNAK OS=Homo sapiens GN=AHNAK PE=1 SV=2 0.999986 45.3807 0.0462591 49.929 32.19 49.929 2 S TKVKTPEMIIQKPKISMQDVDLSLGSPKLKG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Oxidation (M);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPXXX IS(1)MQDVDLS(0.5)LGS(0.5)PK IS(45.38)MQDVDLS(0)LGS(0)PK 2 3 -2.7027 0 188220 0 0 96152 0 0 188350 0 0 75444 0 0 230200 0 0 197830 0 0 252950 0 0 179670 0 0 103520 0 0 55941 0 0 178110 0 0 90713 0 0 190210 0 0 80694 0 0 231310 0 0 192710 0 0 252300 0 0 182610 0 0 108480 0 0 56833 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 1540600000 0 1540600000 0 NaN 1469 896 501 501 1944 2054;2055 2216;2217 2477;2478 2217 2478 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23652 2217 2478 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23652 2216 2477 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23119 Q09666 508 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK AHNAK sp|Q09666|AHNK_HUMAN Neuroblast differentiation-associated protein AHNAK OS=Homo sapiens GN=AHNAK PE=1 SV=2 0.500053 0 0.0462591 49.929 32.19 41.092 2 S MIIQKPKISMQDVDLSLGSPKLKGDIKVSAP X;X;X;X;X;X;X;X;Phospho (STY);Oxidation (M);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPXXXXXXXXXX IS(1)MQDVDLS(0.5)LGS(0.5)PK IS(36.78)MQDVDLS(0)LGS(0)PK 9 3 -2.5235 0 188220 0 0 96152 0 0 188350 0 0 75444 0 0 230200 0 0 197830 0 0 252950 0 0 179670 0 0 103520 0 0 55941 0 0 178110 0 0 90713 0 0 190210 0 0 80694 0 0 231310 0 0 192710 0 0 252300 0 0 182610 0 0 108480 0 0 56833 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 1540600000 0 1540600000 0 NaN 1470 896 508 508 1944 2054;2055 2216;2217 2477;2478 2216 2477 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23119 2217 2478 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23652 2216 2477 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23119 Q09666 511 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK AHNAK sp|Q09666|AHNK_HUMAN Neuroblast differentiation-associated protein AHNAK OS=Homo sapiens GN=AHNAK PE=1 SV=2 0.500053 0 0.0462591 49.929 32.19 41.092 2 S QKPKISMQDVDLSLGSPKLKGDIKVSAPGVQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IS(1)MQDVDLS(0.5)LGS(0.5)PK IS(36.78)MQDVDLS(0)LGS(0)PK 12 3 -2.5235 0 188220 0 0 96152 0 0 188350 0 0 75444 0 0 230200 0 0 197830 0 0 252950 0 0 179670 0 0 103520 0 0 55941 0 0 178110 0 0 90713 0 0 190210 0 0 80694 0 0 231310 0 0 192710 0 0 252300 0 0 182610 0 0 108480 0 0 56833 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 1540600000 0 1540600000 0 NaN 1471 896 511 511 1944 2054;2055 2216;2217 2477;2478 2216 2477 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23119 2217 2478 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23652 2216 2477 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23119 Q09666 93 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK AHNAK sp|Q09666|AHNK_HUMAN Neuroblast differentiation-associated protein AHNAK OS=Homo sapiens GN=AHNAK PE=1 SV=2 0.999938 42.2653 0.000132091 122.44 99.449 122.44 1 S GHHTVGLKLHRKGDRSPEPGQTWTREVFSSC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPXXXXXX KGDRS(1)PEPGQTWTR KGDRS(42.27)PEPGQT(-42.27)WT(-56.33)R 5 3 -0.46229 74335 0 0 52437 0 0 83736 0 0 51041 0 0 12635 0 0 79284 0 0 13479 0 0 55673 0 0 58447 0 0 41881 0 0 70375 0 0 49528 0 0 82908 0 0 52946 0 0 17075 0 0 77993 0 0 14912 0 0 58021 0 0 55763 0 0 40725 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 118710000 118710000 0 0 NaN 1472 896 93 93 2062 2181 2349 2619 2349 2619 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8647 2349 2619 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8647 2349 2619 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8647 Q09666 559 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK AHNAK sp|Q09666|AHNK_HUMAN Neuroblast differentiation-associated protein AHNAK OS=Homo sapiens GN=AHNAK PE=1 SV=2 0.921596 10.7021 0.00179196 110.79 17.627 110.79 1 S ETPNLEGTLTGPRLGSPSGKTGTCRISMSEV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX LGS(0.922)PS(0.078)GK LGS(10.7)PS(-10.7)GK 3 2 0.54886 92978 0 0 84245 0 0 87882 0 0 81836 0 0 7618.2 0 0 75336 0 0 10418 0 0 57525 0 0 86515 0 0 2754.6 0 0 87962 0 0 79570 0 0 87808 0 0 84069 0 0 12581 0 0 75585 0 0 12554 0 0 58475 0 0 82136 0 0 3925.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 143870000 143870000 0 0 NaN 1473 896 559 559 2387 2524 2717 3035 2717 3035 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10488 2717 3035 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10488 2717 3035 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10488 Q09666 135 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK AHNAK sp|Q09666|AHNK_HUMAN Neuroblast differentiation-associated protein AHNAK OS=Homo sapiens GN=AHNAK PE=1 SV=2 1 72.8038 3.8683E-07 141.48 118.15 141.48 1 S EYQRIYTTKIKPRLKSEDGVEGDLGETQSRT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX LKS(1)EDGVEGDLGETQSR LKS(72.8)EDGVEGDLGET(-72.8)QS(-90.56)R 3 3 -0.47608 30255 0 0 9219.6 0 0 30711 0 0 11501 0 0 6677.4 0 0 30477 0 0 7551.8 0 0 14987 0 0 8940.7 0 0 12625 0 0 28630 0 0 8722.5 0 0 30606 0 0 11974 0 0 8209 0 0 29532 0 0 7683.1 0 0 16014 0 0 8762.8 0 0 12235 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 69749000 69749000 0 0 NaN 1474 896 135 135 2420 2558 2752 3074 2752 3074 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13722 2752 3074 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13722 2752 3074 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13722 Q09666 210 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK AHNAK sp|Q09666|AHNK_HUMAN Neuroblast differentiation-associated protein AHNAK OS=Homo sapiens GN=AHNAK PE=1 SV=2 0.993494 21.8385 3.18505E-53 366.13 322.79 366.13 1 S VDVETQSGKTVIRLPSGSGAASPTGSAVDIR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP LPS(0.993)GS(0.007)GAASPTGSAVDIR LPS(21.84)GS(-21.84)GAAS(-79.29)PT(-118.12)GS(-146.28)AVDIR 3 2 0.26864 16698 0 0 5835.6 0 0 17562 0 0 6009.1 0 0 3007.8 0 0 17436 0 0 3732.7 0 0 7984 0 0 6633.1 0 0 11997 0 0 15804 0 0 5513.7 0 0 17457 0 0 6343 0 0 3924.6 0 0 16871 0 0 3844.2 0 0 8736.3 0 0 6421.8 0 0 11482 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 115330000 115330000 0 0 NaN 1475 896 210 210 2508 2649 2845 3174 2845 3174 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15079 2845 3174 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15079 2845 3174 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15079 Q09666 216 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK AHNAK sp|Q09666|AHNK_HUMAN Neuroblast differentiation-associated protein AHNAK OS=Homo sapiens GN=AHNAK PE=1 SV=2 0.999542 33.3938 4.82841E-11 193.06 166.92 193.06 1 S SGKTVIRLPSGSGAASPTGSAVDIRAGAISA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPXXXXXX LPSGSGAAS(1)PTGSAVDIR LPS(-77.18)GS(-63.56)GAAS(33.39)PT(-33.39)GS(-70.52)AVDIR 9 3 -0.46621 30394 0 0 24733 0 0 30944 0 0 22842 0 0 18001 0 0 30917 0 0 18100 0 0 22710 0 0 23605 0 0 10317 0 0 28763 0 0 23354 0 0 30969 0 0 23699 0 0 19038 0 0 30546 0 0 18570 0 0 23409 0 0 23057 0 0 10240 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 61369000 61369000 0 0 NaN 1476 896 216 216 2508 2649 2844 3172;3173 2844 3173 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14724 2844 3173 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14724 2844 3173 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14724 Q09666 5077 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK AHNAK sp|Q09666|AHNK_HUMAN Neuroblast differentiation-associated protein AHNAK OS=Homo sapiens GN=AHNAK PE=1 SV=2 1 55.7541 0.0241672 55.754 30.095 55.754 1 S VNIAGPDAALKVDVKSPKTKKTMFGKMYFPD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX VDVKS(1)PK VDVKS(55.75)PK 5 3 0.47172 111840 0 0 32684 0 0 113260 0 0 32937 0 0 5757.9 0 0 98675 0 0 7765.7 0 0 48459 0 0 32970 0 0 2087.5 0 0 105830 0 0 30877 0 0 112650 0 0 34860 0 0 12243 0 0 95347 0 0 8498.5 0 0 50617 0 0 31462 0 0 3087.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 232160000 232160000 0 0 NaN 1477 896 5077 5077 5082 5417 5769 6411 5769 6411 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11056 5769 6411 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11056 5769 6411 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11056 Q09666 3426 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK AHNAK sp|Q09666|AHNK_HUMAN Neuroblast differentiation-associated protein AHNAK OS=Homo sapiens GN=AHNAK PE=1 SV=2 1 92.1873 6.42294E-05 125.88 93.497 125.88 1 S SSPKVSMPDVELNLKSPKVKGDLDIAGPNLE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPXXXXXXXXXXXXX VSMPDVELNLKS(1)PK VS(-92.19)MPDVELNLKS(92.19)PK 12 3 0.5461 18435 0 0 13906 0 0 22816 0 0 14241 0 0 4578.2 0 0 23467 0 0 6253.9 0 0 15999 0 0 13782 0 0 23245 0 0 17460 0 0 13139 0 0 22502 0 0 14750 0 0 5753.6 0 0 23061 0 0 6491.6 0 0 17038 0 0 13280 0 0 22258 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13284000 13284000 0 0 NaN 1478 896 3426 3426 5253 5599 5969 6633 5969 6633 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20212 5969 6633 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20212 5969 6633 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20212 Q0JRZ9 533 Q0JRZ9 Q0JRZ9 F-BAR domain only protein 2 FCHO2 sp|Q0JRZ9|FCHO2_HUMAN F-BAR domain only protein 2 OS=Homo sapiens GN=FCHO2 PE=1 SV=2 0.973113 15.5862 1.89647E-25 269.74 246.34 269.74 1 S LSAANTPTVGVSRGPSPVSLGNQDTLPVAVA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP GPS(0.973)PVS(0.027)LGNQDTLPVAVALTESVNAYFK GPS(15.59)PVS(-15.59)LGNQDT(-99.73)LPVAVALT(-214.99)ES(-239.6)VNAY(-264.36)FK 3 3 0.034334 9080.8 0 0 14267 0 0 9910.6 0 0 15048 0 0 17535 0 0 9832.4 0 0 19244 0 0 15774 0 0 16408 0 0 56998 0 0 8595.9 0 0 13482 0 0 10028 0 0 15320 0 0 17366 0 0 10270 0 0 19429 0 0 17310 0 0 16310 0 0 54036 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 66291000 66291000 0 0 NaN 1479 897 533 533 1566 1650 1783;1784 1981;1982 1784 1982 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24357 1784 1982 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24357 1784 1982 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24357 Q0JRZ9 488 Q0JRZ9 Q0JRZ9 F-BAR domain only protein 2 FCHO2 sp|Q0JRZ9|FCHO2_HUMAN F-BAR domain only protein 2 OS=Homo sapiens GN=FCHO2 PE=1 SV=2 0.971815 17.5183 0.00778099 80.112 65.067 80.112 1 S TSGKLSGINEIPRPFSPPVTSNTSPPPAAPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPPPPPPPPP LSGINEIPRPFS(0.972)PPVT(0.017)S(0.005)NT(0.005)S(0.001)PPPAAPLAR LS(-42.26)GINEIPRPFS(17.52)PPVT(-17.52)S(-23.09)NT(-23.09)S(-28.51)PPPAAPLAR 12 3 0.15402 5457.1 0 0 5161 0 0 5443.7 0 0 5806 0 0 5546.8 0 0 5339.7 0 0 7322.6 0 0 7292.3 0 0 5239.4 0 0 52015 0 0 5163.8 0 0 4879.1 0 0 5486.9 0 0 5914.5 0 0 5646 0 0 5495.5 0 0 7311.5 0 0 8806.3 0 0 5258.1 0 0 49147 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 15068000 15068000 0 0 NaN 1480 897 488 488 2557 2701 2899 3232;3233 2899 3233 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21478 2899 3233 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21478 2899 3233 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21478 Q0JRZ9 403 Q0JRZ9 Q0JRZ9 F-BAR domain only protein 2 FCHO2 sp|Q0JRZ9|FCHO2_HUMAN F-BAR domain only protein 2 OS=Homo sapiens GN=FCHO2 PE=1 SV=2 0.994484 22.5597 6.92836E-06 147.02 82.11 147.02 1 S PAISRHSPVQMNRNLSNEELTKSKPSAPPNE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX NLS(0.994)NEELT(0.006)K NLS(22.56)NEELT(-22.56)K 3 2 -0.16278 73863 0 0 130040 0 0 68947 0 0 131760 0 0 82472 0 0 67935 0 0 90966 0 0 98125 0 0 145940 0 0 28847 0 0 69875 0 0 122860 0 0 69890 0 0 134150 0 0 83066 0 0 71377 0 0 93693 0 0 98126 0 0 141670 0 0 29434 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 95086000 95086000 0 0 NaN 1481 897 403 403 2865 3036 3251 3607 3251 3607 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13451 3251 3607 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13451 3251 3607 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13451 Q0VD83 175 Q0VD83 Q0VD83 Apolipoprotein B receptor APOBR sp|Q0VD83|APOBR_HUMAN Apolipoprotein B receptor OS=Homo sapiens GN=APOBR PE=1 SV=2 1 202.342 9.12013E-11 202.34 164.7 202.34 1 S QESHEQEVNREERLRSWEQEEEEEEVRAREP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX LRS(1)WEQEEEEEEVR LRS(202.34)WEQEEEEEEVR 3 2 -1.2942 9457.1 0 0 2582.9 0 0 8794 0 0 2429.4 0 0 4229 0 0 9843.8 0 0 4271 0 0 6243.3 0 0 3218.1 0 0 12642 0 0 8946.4 0 0 2439.1 0 0 8837.4 0 0 2622.9 0 0 4560.7 0 0 9514.7 0 0 4316.7 0 0 6782.9 0 0 3219.9 0 0 12048 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10952000 10952000 0 0 NaN 1482 898 175 175 2543 2687 2884 3216 2884 3216 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15495 2884 3216 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15495 2884 3216 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15495 Q12789 1653 Q12789 Q12789 General transcription factor 3C polypeptide 1 GTF3C1 sp|Q12789|TF3C1_HUMAN General transcription factor 3C polypeptide 1 OS=Homo sapiens GN=GTF3C1 PE=1 SV=4 0.997258 25.8817 0.000573156 108.68 83.832 108.68 1 S AQASHTNYLLMRGYYSPGIVSTRNLNPNDSI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX GYYS(0.997)PGIVS(0.003)TR GY(-61.46)Y(-50.44)S(25.88)PGIVS(-25.88)T(-37.99)R 4 2 1.4514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1483 899 1653 1653 1689 1781 1923 2141 1923 2141 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14489 1923 2141 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14489 1923 2141 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14489 Q12789 667 Q12789 Q12789 General transcription factor 3C polypeptide 1 GTF3C1 sp|Q12789|TF3C1_HUMAN General transcription factor 3C polypeptide 1 OS=Homo sapiens GN=GTF3C1 PE=1 SV=4 1 90.7309 0.00597085 90.731 57.673 90.731 1 S TKCCKKSIVRLVRNLSEEGLLRLYRTTVIQD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX NLS(1)EEGLLR NLS(90.73)EEGLLR 3 2 1.4651 10486 0 0 10262 0 0 10109 0 0 9389.8 0 0 12411 0 0 10570 0 0 14742 0 0 12268 0 0 10143 0 0 7053.3 0 0 9921.3 0 0 9688.9 0 0 10234 0 0 9713.3 0 0 12488 0 0 10577 0 0 14769 0 0 12453 0 0 10204 0 0 6925.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16491000 16491000 0 0 NaN 1484 899 667 667 2858 3029 3244 3600 3244 3600 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16319 3244 3600 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16319 3244 3600 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16319 Q12797 29 Q12797 Q12797 Aspartyl/asparaginyl beta-hydroxylase ASPH sp|Q12797|ASPH_HUMAN Aspartyl/asparaginyl beta-hydroxylase OS=Homo sapiens GN=ASPH PE=1 SV=3 0.911608 10.2109 1.95002E-12 203.45 191.82 203.45 1 S SSSGSGSGSTSAGSSSPGARRETKHGGHKNG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX SSGNSSSSGSGSGSTSAGS(0.002)S(0.087)S(0.912)PGAR S(-149.45)S(-149.45)GNS(-136.37)S(-132.29)S(-132.29)S(-132.29)GS(-127.86)GS(-106.66)GS(-88.1)T(-76.33)S(-54.54)AGS(-27.7)S(-10.21)S(10.21)PGAR 21 3 -1.5026 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35.736 0 0 0 0 0 5096.9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 188.04 0 0 0 0 0 4800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 6673200 6673200 0 0 NaN 1485 900 29 29 4350 4636 4939 5483 4939 5483 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4783 4939 5483 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4783 4939 5483 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4783 Q12802 1876 Q12802 Q12802 A-kinase anchor protein 13 AKAP13 sp|Q12802|AKP13_HUMAN A-kinase anchor protein 13 OS=Homo sapiens GN=AKAP13 PE=1 SV=2 0.999997 56.1807 0.00109154 98.562 77.899 98.562 1 S VIMRNKPSQPKERPRSAVLLVDETATTPIFA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(1)AVLLVDETATTPIFANR S(56.18)AVLLVDET(-56.18)AT(-68.03)T(-73.78)PIFANR 1 3 1.086 8814.5 0 0 7022.3 0 0 9607.2 0 0 6934.8 0 0 8363.8 0 0 9252.1 0 0 8553 0 0 7433.2 0 0 8326 0 0 28910 0 0 8343.8 0 0 6633.2 0 0 9613.5 0 0 7163 0 0 8563.5 0 0 9202 0 0 8690.9 0 0 8397.6 0 0 8224.9 0 0 27394 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 33083000 33083000 0 0 NaN 1486 901 1876 1876 3636 3866 4120 4577 4120 4577 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23407 4120 4577 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23407 4120 4577 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23407 Q12809 1137 Q12809 Q12809 Potassium voltage-gated channel subfamily H member 2 KCNH2 sp|Q12809|KCNH2_HUMAN Potassium voltage-gated channel subfamily H member 2 OS=Homo sapiens GN=KCNH2 PE=1 SV=1 1 89.7561 2.28424E-11 205.07 176.85 205.07 1 S PGAPELPQEGPTRRLSLPGQLGALTSQPLHR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RLS(1)LPGQLGALTSQPLHR RLS(89.76)LPGQLGALT(-89.76)S(-118.23)QPLHR 3 3 0.41172 3127 0 0 6242.7 0 0 3388.1 0 0 6333.1 0 0 4758.1 0 0 3117 0 0 3276.7 0 0 5505.8 0 0 6457.1 0 0 10279 0 0 2959.9 0 0 5897.8 0 0 3410.6 0 0 6445.4 0 0 4729.7 0 0 3317.2 0 0 3493.6 0 0 5739.9 0 0 6236.3 0 0 9806.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21348000 21348000 0 0 NaN 1487 902 1137 1137 3332 3534 3771 4187 3771 4187 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19983 3771 4187 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19983 3771 4187 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19983 Q12830 1231 Q12830 Q12830 Nucleosome-remodeling factor subunit BPTF BPTF sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens GN=BPTF PE=1 SV=3 0.990427 20.6843 0.0170939 68.676 48.512 68.676 1 S GIGKTSTNSSKNLSESPVITKAKEGCQSDSM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX NLS(0.008)ES(0.99)PVIT(0.001)K NLS(-20.68)ES(20.68)PVIT(-29.5)K 5 2 -0.98429 15871 0 0 19809 0 0 17955 0 0 20508 0 0 17607 0 0 16488 0 0 18570 0 0 17391 0 0 21729 0 0 17048 0 0 15026 0 0 18717 0 0 17957 0 0 20949 0 0 17905 0 0 16750 0 0 18942 0 0 17923 0 0 21306 0 0 16455 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9343900 9343900 0 0 NaN 1488 904 1231 1231 2859 3030 3245 3601 3245 3601 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14641 3245 3601 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14641 3245 3601 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14641 Q12830 1310 Q12830 Q12830 Nucleosome-remodeling factor subunit BPTF BPTF sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens GN=BPTF PE=1 SV=3 1 160.042 6.03661E-07 160.04 75.868 160.04 1 S DVSIRSPETKCPKQNSIENDIEEKVSDLASR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX QNS(1)IENDIEEK QNS(160.04)IENDIEEK 3 2 0.98628 12105 0 0 8648.7 0 0 11892 0 0 8510.1 0 0 19434 0 0 12947 0 0 16277 0 0 14692 0 0 9728.1 0 0 28122 0 0 11454 0 0 8169.4 0 0 12073 0 0 8817.6 0 0 19226 0 0 12854 0 0 16541 0 0 15517 0 0 9876.4 0 0 26820 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9310200 9310200 0 0 NaN 1489 904 1310 1310 3092 3280 3509 3890 3509 3890 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15676 3509 3890 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15676 3509 3890 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15676 Q12830 216 Q12830 Q12830 Nucleosome-remodeling factor subunit BPTF BPTF sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens GN=BPTF PE=1 SV=3 1 110.558 0.000115414 110.56 57.983 110.56 1 S SSTPGRRKPRVHRPRSPILEEKDIPPLEFPK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX VHRPRS(1)PILEEK VHRPRS(110.56)PILEEK 6 4 -0.18833 55869 0 0 59501 0 0 59056 0 0 57741 0 0 58672 0 0 57843 0 0 63413 0 0 57693 0 0 61320 0 0 14402 0 0 52879 0 0 56198 0 0 59287 0 0 59395 0 0 59628 0 0 58000 0 0 64264 0 0 58310 0 0 60593 0 0 14896 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 75569000 75569000 0 0 NaN 1490 904 216 216 4120;5132 4393;5469 4684;5825 5200;6476 5825 6476 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9816 5825 6476 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9816 5825 6476 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9816 Q12834 41 Q12834 Q12834 Cell division cycle protein 20 homolog CDC20 sp|Q12834|CDC20_HUMAN Cell division cycle protein 20 homolog OS=Homo sapiens GN=CDC20 PE=1 SV=2 1 106.108 0.000257026 106.11 72.88 106.11 1 S ARWQRKAKEAAGPAPSPMRAANRSHSAGRTP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX EAAGPAPS(1)PMR EAAGPAPS(106.11)PMR 8 2 -0.69113 19803 0 0 13990 0 0 21131 0 0 14559 0 0 12182 0 0 21490 0 0 12252 0 0 17547 0 0 14636 0 0 4004.5 0 0 18744 0 0 13219 0 0 21092 0 0 15025 0 0 12894 0 0 21189 0 0 12534 0 0 17874 0 0 14341 0 0 4176.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16351000 16351000 0 0 NaN 1491 905 41 41 859 911 988 1091 988 1091 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8806 988 1091 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8806 988 1091 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8806 Q12849 335 Q12849 Q12849 G-rich sequence factor 1 GRSF1 sp|Q12849|GRSF1_HUMAN G-rich sequence factor 1 OS=Homo sapiens GN=GRSF1 PE=1 SV=3 0.999824 38.5437 0.00135291 103.26 84.475 103.26 1 S EIFPSRRNEVRTHVGSYKGKKIASFPTAKYI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX THVGS(1)YK T(-38.54)HVGS(38.54)Y(-44.44)K 5 3 -0.18105 39512 0 0 44534 0 0 42421 0 0 40452 0 0 29671 0 0 44004 0 0 30685 0 0 40310 0 0 46243 0 0 3011.9 0 0 37400 0 0 42047 0 0 42394 0 0 41841 0 0 30892 0 0 43908 0 0 31612 0 0 40667 0 0 44968 0 0 3769 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 68498000 68498000 0 0 NaN 1492 906 335 335 4744 5059 5391 5994 5391 5994 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8884 5391 5994 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8884 5391 5994 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8884 Q12851 328 Q12851 Q12851 Mitogen-activated protein kinase kinase kinase kinase 2 MAP4K2 sp|Q12851|M4K2_HUMAN Mitogen-activated protein kinase kinase kinase kinase 2 OS=Homo sapiens GN=MAP4K2 PE=1 SV=2 0.742033 4.5886 0.000561507 100.13 77.549 100.13 1 S TIHSRGQHGPAERTPSEIQFHQVKFGAPRRK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX T(0.258)PS(0.742)EIQFHQVK T(-4.59)PS(4.59)EIQFHQVK 3 3 0.13827 14521 0 0 7779.7 0 0 16225 0 0 8975.6 0 0 20098 0 0 14711 0 0 18192 0 0 13490 0 0 9157.7 0 0 4614.9 0 0 13747 0 0 7356 0 0 16283 0 0 9235 0 0 20132 0 0 14483 0 0 18362 0 0 13718 0 0 9419 0 0 4657.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20511000 20511000 0 0 NaN 1493 907 328 328 4843 5168 5507 6125 5507 6125 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14262 5507 6125 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14262 5507 6125 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14262 Q12872 909 Q12872 Q12872 Splicing factor, suppressor of white-apricot homolog SFSWAP sp|Q12872|SFSWA_HUMAN Splicing factor, suppressor of white-apricot homolog OS=Homo sapiens GN=SFSWAP PE=1 SV=3 1 90.9163 1.0849E-31 297.22 268.29 297.22 1 S PVESRGSSQERSRGVSQEKEAQISSAIVSSV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP GVS(1)QEKEAQISSAIVSSVQSK GVS(90.92)QEKEAQIS(-90.92)S(-107.36)AIVS(-175.25)S(-186.95)VQS(-232.68)K 3 3 0.2259 10177 0 0 9144.1 0 0 10149 0 0 8408.9 0 0 9133.3 0 0 9753.1 0 0 9757.6 0 0 10776 0 0 11967 0 0 31459 0 0 9630.1 0 0 8633.9 0 0 10210 0 0 8700.5 0 0 9339.4 0 0 9788 0 0 9962.9 0 0 11717 0 0 11714 0 0 29872 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 54966000 54966000 0 0 NaN 1494 908 909 909 1676 1768 1910 2128 1910 2128 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20838 1910 2128 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20838 1910 2128 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20838 Q12872 834 Q12872 Q12872 Splicing factor, suppressor of white-apricot homolog SFSWAP sp|Q12872|SFSWA_HUMAN Splicing factor, suppressor of white-apricot homolog OS=Homo sapiens GN=SFSWAP PE=1 SV=3 0.746341 4.69588 0.0394128 52.549 25.548 52.549 1 S RREERSVPTAYRVSRSPGASRKRTRSRSPHE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX VS(0.253)RS(0.746)PGAS(0.001)R VS(-4.7)RS(4.7)PGAS(-31.52)R 4 2 -0.015164 3006.2 0 0 1889.8 0 0 2784.9 0 0 2772 0 0 2335.9 0 0 2532.3 0 0 2338.5 0 0 2289.6 0 0 2398.2 0 0 1995.7 0 0 2843.8 0 0 1790.2 0 0 2811.5 0 0 2788.5 0 0 2397.1 0 0 2549.7 0 0 2381.9 0 0 2366.2 0 0 2363.7 0 0 1932.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 3011000 3011000 0 0 NaN 1495 908 834 834 5270 5616 5987 6652 5987 6652 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5126 5987 6652 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5126 5987 6652 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5126 Q12873 1601 Q12873 Q12873 Chromodomain-helicase-DNA-binding protein 3 CHD3 sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3 PE=1 SV=3 0.99995 43.0314 0.00377398 91.276 78.427 91.276 1 S NSRIGEKMETEADAPSPAPSLGERLEPRKIP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPXXXXXXX METEADAPS(1)PAPSLGER MET(-61.47)EADAPS(43.03)PAPS(-43.03)LGER 9 3 -0.81564 19833 0 0 9090.6 0 0 21514 0 0 10042 0 0 14871 0 0 20915 0 0 14023 0 0 16681 0 0 9812 0 0 9877.3 0 0 18773 0 0 8593 0 0 21484 0 0 10427 0 0 15468 0 0 20444 0 0 14200 0 0 17194 0 0 9860.1 0 0 9686.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23391000 23391000 0 0 NaN 1496 909 1601 1601 2688 2845 3052 3398 3052 3398 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13173 3052 3398 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13173 3052 3398 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13173 Q12888 727 Q12888 Q12888 Tumor suppressor p53-binding protein 1 TP53BP1 sp|Q12888|TP53B_HUMAN Tumor suppressor p53-binding protein 1 OS=Homo sapiens GN=TP53BP1 PE=1 SV=2 0.993448 22.4562 1.1969E-05 132.33 110.73 132.33 1 S CSEAMEVETSVISIDSPQKLAILDQELEHKE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX ECSEAMEVET(0.001)SVIS(0.006)IDS(0.993)PQK ECS(-80.68)EAMEVET(-32.33)S(-34.82)VIS(-22.46)IDS(22.46)PQK 17 3 -1.9715 4005.4 0 0 3677 0 0 3036.4 0 0 3814 0 0 3738.4 0 0 4647 0 0 3751.1 0 0 4123.9 0 0 3952 0 0 38329 0 0 3786.5 0 0 3474.3 0 0 3121.8 0 0 3921.2 0 0 3752.6 0 0 4686.4 0 0 3823.2 0 0 5311.8 0 0 3890.9 0 0 36186 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12857000 12857000 0 0 NaN 1497 911 727 727 895 948 1027 1135 1027 1135 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19815 1027 1135 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19815 1027 1135 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19815 Q12888 1362 Q12888 Q12888 Tumor suppressor p53-binding protein 1 TP53BP1 sp|Q12888|TP53B_HUMAN Tumor suppressor p53-binding protein 1 OS=Homo sapiens GN=TP53BP1 PE=1 SV=2 1 89.266 0.0060553 89.266 58.874 89.266 1 S ADFALPSSRGGPGKLSPRKGVSQTGTPVCEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX GGPGKLS(1)PR GGPGKLS(89.27)PR 7 2 0.65585 27929 0 0 40441 0 0 25652 0 0 40874 0 0 26343 0 0 23066 0 0 28496 0 0 33945 0 0 43922 0 0 4417.8 0 0 26420 0 0 38206 0 0 25974 0 0 41656 0 0 26737 0 0 24060 0 0 29325 0 0 33761 0 0 42684 0 0 4945.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 85665000 85665000 0 0 NaN 1498 911 1362 1362 1442 1519 1629 1799 1629 1799 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8331 1629 1799 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8331 1629 1799 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8331 Q12888 630 Q12888 Q12888 Tumor suppressor p53-binding protein 1 TP53BP1 sp|Q12888|TP53B_HUMAN Tumor suppressor p53-binding protein 1 OS=Homo sapiens GN=TP53BP1 PE=1 SV=2 0.935014 11.58 9.02099E-12 189.9 169.75 189.9 1 S VCIDLTCDSGSQAVPSPATRSEALSSVLDQE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX GREETVAEDVCIDLTCDSGSQAVPS(0.935)PAT(0.065)R GREET(-164.57)VAEDVCIDLT(-125.78)CDS(-102.17)GS(-73.05)QAVPS(11.58)PAT(-11.58)R 25 4 -0.013088 2896.8 0 0 3944.8 0 0 2692.9 0 0 3446.8 0 0 3540 0 0 3039.1 0 0 3455.2 0 0 3356.1 0 0 2860.6 0 0 13576 0 0 2740.3 0 0 3723.6 0 0 2733.5 0 0 3562.9 0 0 3540.6 0 0 3094 0 0 3504.9 0 0 3763.2 0 0 2847.7 0 0 12861 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14832000 14832000 0 0 NaN 1499 911 630 630 1584 1669 1804 2005 1804 2005 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17763 1804 2005 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17763 1804 2005 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17763 Q12888 1028 Q12888 Q12888 Tumor suppressor p53-binding protein 1 TP53BP1 sp|Q12888|TP53B_HUMAN Tumor suppressor p53-binding protein 1 OS=Homo sapiens GN=TP53BP1 PE=1 SV=2 0.999617 34.1646 0.000120625 109.23 91.404 109.23 1 S GERKNGSTAVAESVASPQKTMSVLSCICEAR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPXXXXXXXXXXXX KNGSTAVAESVAS(1)PQK KNGS(-79.78)T(-80.42)AVAES(-34.16)VAS(34.16)PQK 13 3 -0.044548 14821 0 0 15371 0 0 14076 0 0 15781 0 0 13324 0 0 14482 0 0 12158 0 0 13992 0 0 20056 0 0 13742 0 0 14021 0 0 14523 0 0 14205 0 0 16157 0 0 13556 0 0 14594 0 0 12648 0 0 14468 0 0 19455 0 0 13264 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14246000 14246000 0 0 NaN 1500 911 1028 1028 2143 2265 2439 2716 2439 2716 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10800 2439 2716 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10800 2439 2716 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10800 Q12888 500 Q12888 Q12888 Tumor suppressor p53-binding protein 1 TP53BP1 sp|Q12888|TP53B_HUMAN Tumor suppressor p53-binding protein 1 OS=Homo sapiens GN=TP53BP1 PE=1 SV=2 0.999967 44.8553 0.000201484 101.16 81.32 101.16 1 S LTVECSKTSEIEPKNSPEDLGLSLTGDSCKL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPX NS(1)PEDLGLSLTGDSCK NS(44.86)PEDLGLS(-44.86)LT(-79)GDS(-95.62)CK 2 3 -0.40417 5593.2 0 0 7158.3 0 0 6509.6 0 0 7330.1 0 0 5377.7 0 0 4925.6 0 0 6449.6 0 0 6345 0 0 6779.2 0 0 22448 0 0 5296 0 0 6763.2 0 0 6490.3 0 0 7477.2 0 0 5539.6 0 0 5104.6 0 0 6522.7 0 0 6985.9 0 0 6675 0 0 21284 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18290000 18290000 0 0 NaN 1501 911 500 500 2923 3099 3319 3679 3319 3679 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19026 3319 3679 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19026 3319 3679 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19026 Q12888 265 Q12888 Q12888 Tumor suppressor p53-binding protein 1 TP53BP1 sp|Q12888|TP53B_HUMAN Tumor suppressor p53-binding protein 1 OS=Homo sapiens GN=TP53BP1 PE=1 SV=2 1 80.8664 6.7831E-06 147.62 111.1 147.62 1 S KEQNPPPARSEDMPFSPKASVAAMEAKEQLS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX SEDMPFS(1)PK S(-80.87)EDMPFS(80.87)PK 7 2 -0.25721 18789 0 0 36518 0 0 18194 0 0 32887 0 0 17575 0 0 16863 0 0 17625 0 0 26931 0 0 42348 0 0 13280 0 0 17777 0 0 34477 0 0 18347 0 0 33731 0 0 17895 0 0 17769 0 0 18615 0 0 27023 0 0 40736 0 0 13128 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 33676000 33676000 0 0 NaN 1502 911 265 265 3683 3918 4178 4644 4178 4644 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16081 4178 4644 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16081 4178 4644 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16081 Q12888 366 Q12888 Q12888 Tumor suppressor p53-binding protein 1 TP53BP1 sp|Q12888|TP53B_HUMAN Tumor suppressor p53-binding protein 1 OS=Homo sapiens GN=TP53BP1 PE=1 SV=2 0.999959 43.9476 1.43216E-12 198.21 179.43 198.21 1 S VQDSLSTNSSDLVAPSPDAFRSTPFIVPSSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX SLVQDSLSTNSSDLVAPS(1)PDAFR S(-128.77)LVQDS(-107.11)LS(-88.04)T(-83.42)NS(-64.81)S(-43.95)DLVAPS(43.95)PDAFR 18 3 0.14194 3792.5 0 0 4403.3 0 0 3985.2 0 0 3544.6 0 0 3686 0 0 3910.3 0 0 4341.7 0 0 5320.5 0 0 4316.5 0 0 50692 0 0 3589.4 0 0 4154.8 0 0 3999.4 0 0 3697.8 0 0 3767.5 0 0 4016.3 0 0 4387.3 0 0 6809.6 0 0 4260.1 0 0 47855 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 32340000 32340000 0 0 NaN 1503 911 366 366 4021 4286 4574 5082 4574 5082 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20967 4574 5082 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20967 4574 5082 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20967 Q12888 380 Q12888 Q12888 Tumor suppressor p53-binding protein 1 TP53BP1 sp|Q12888|TP53B_HUMAN Tumor suppressor p53-binding protein 1 OS=Homo sapiens GN=TP53BP1 PE=1 SV=2 0.985673 19.3036 5.893E-05 122.1 105.6 122.1 1 S PSPDAFRSTPFIVPSSPTEQEGRQDKPMDTS X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPXXXXXXXX STPFIVPS(0.003)S(0.986)PT(0.012)EQEGR S(-93.02)T(-93.02)PFIVPS(-25.53)S(19.3)PT(-19.3)EQEGR 9 3 0.38873 4671.9 0 0 5496.1 0 0 5302.1 0 0 5521 0 0 4546 0 0 5178.5 0 0 5136.5 0 0 5865.4 0 0 5472.4 0 0 6120.6 0 0 4423.2 0 0 5192.1 0 0 5294.6 0 0 5661.8 0 0 4666.6 0 0 5226.1 0 0 5209.3 0 0 6041.2 0 0 5385.4 0 0 5899 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 144380000 144380000 0 0 NaN 1504 911 380 380 4513 4807 5120 5686 5120 5686 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16713 5120 5686 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16713 5120 5686 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16713 Q12906 482 Q12906 Q12906 Interleukin enhancer-binding factor 3 ILF3 sp|Q12906|ILF3_HUMAN Interleukin enhancer-binding factor 3 OS=Homo sapiens GN=ILF3 PE=1 SV=3 0.996483 27.3516 0.000153214 104.06 77.582 104.06 1 S LPTGAEGRDSSKGEDSAEETEAKPAVVAPAP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPXXXXXXXX DS(0.002)S(0.002)KGEDS(0.996)AEETEAK DS(-27.35)S(-28.03)KGEDS(27.35)AEET(-39.38)EAK 8 3 -0.26698 10840 0 0 10178 0 0 11795 0 0 11115 0 0 11063 0 0 11134 0 0 14299 0 0 11332 0 0 11289 0 0 4952.2 0 0 10261 0 0 9620.3 0 0 11819 0 0 11356 0 0 11313 0 0 11171 0 0 14318 0 0 11509 0 0 11267 0 0 4925.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9968000 9968000 0 0 NaN 1505 912 482 482 820 868 924 1019 924 1019 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7943 924 1019 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7943 924 1019 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7943 Q12906 382 Q12906 Q12906 Interleukin enhancer-binding factor 3 ILF3 sp|Q12906|ILF3_HUMAN Interleukin enhancer-binding factor 3 OS=Homo sapiens GN=ILF3 PE=1 SV=3 0.997976 26.9299 1.34038E-06 140.8 113.84 70.094 1 S ITPMKRPMEEDGEEKSPSKKKKKIQKKEEKA X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPXXXXXXXXXXXX RPMEEDGEEKS(0.998)PS(0.002)K RPMEEDGEEKS(26.93)PS(-26.93)K 11 3 -0.34443 55779 0 0 39577 0 0 59139 0 0 39074 0 0 44019 0 0 56583 0 0 48842 0 0 49852 0 0 46730 0 0 9543.2 0 0 52793 0 0 37384 0 0 59180 0 0 40432 0 0 45629 0 0 55868 0 0 49427 0 0 50553 0 0 46198 0 0 10140 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 107500000 107500000 0 0 NaN 1506 912 382 382 3393 3604;3605 3844;3845 4269;4270 3844 4269 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6947 3845 4270 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8318 3845 4270 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8318 Q12912 84 Q12912 Q12912 Lymphoid-restricted membrane protein;Processed lymphoid-restricted membrane protein LRMP sp|Q12912|LRMP_HUMAN Lymphoid-restricted membrane protein OS=Homo sapiens GN=LRMP PE=1 SV=3 0.931376 11.3265 0.000156724 130.53 99.971 130.53 1 S ERVCPESLLQSREYSSLPLPRHTSSTDGTIT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX EYS(0.069)S(0.931)LPLPR EY(-95.6)S(-11.33)S(11.33)LPLPR 4 2 -0.53622 12146 0 0 7722.2 0 0 14263 0 0 6845.4 0 0 17971 0 0 12798 0 0 19660 0 0 13630 0 0 8024.1 0 0 10964 0 0 11501 0 0 7289.9 0 0 14289 0 0 7177.8 0 0 18031 0 0 12594 0 0 19612 0 0 13970 0 0 8410.9 0 0 10640 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9958000 9958000 0 0 NaN 1507 913 84 84 1233 1298 1398 1550 1398 1550 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17011 1398 1550 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17011 1398 1550 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17011 Q12912 363 Q12912 Q12912 Lymphoid-restricted membrane protein;Processed lymphoid-restricted membrane protein LRMP sp|Q12912|LRMP_HUMAN Lymphoid-restricted membrane protein OS=Homo sapiens GN=LRMP PE=1 SV=3 0.937846 13.0349 0.0153596 64.843 51.18 47.217 1;2 S PLEDDDDCQIKKRSASLNSKPSSLRRVTIAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX S(0.047)AS(0.938)LNS(0.009)KPS(0.003)S(0.003)LR S(-13.03)AS(13.03)LNS(-20.39)KPS(-24.31)S(-24.31)LR 3 3 2.3844 72747 22392 0 34177 13024 0 82920 22585 0 40022 14605 0 47072 19333 0 77176 23549 0 49022 20376 0 50549 18479 0 34073 15270 0 11011 7547.9 0 68876 21189 0 32319 12312 0 82475 22693 0 41334 15043 0 49898 19821 0 75386 23156 0 49397 20551 0 52068 18959 0 34254 15284 0 11538 7534.9 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 55822000 31052000 24770000 0 NaN 1508 913 363 363 3607;3608 3834;3835 4087;4088 4543;4544;4545 4087 4544 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10797 4088 4545 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9233 4088 4545 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9233 Q12912 370 Q12912 Q12912 Lymphoid-restricted membrane protein;Processed lymphoid-restricted membrane protein LRMP sp|Q12912|LRMP_HUMAN Lymphoid-restricted membrane protein OS=Homo sapiens GN=LRMP PE=1 SV=3 0.907988 10.1023 0.0153596 64.843 51.18 64.843 2 S CQIKKRSASLNSKPSSLRRVTIASLPRNIGN X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX S(0.399)AS(0.6)LNS(0.002)KPS(0.091)S(0.908)LRR S(-1.8)AS(1.8)LNS(-28.03)KPS(-10.1)S(10.1)LRR 10 3 0.54821 0 22392 0 0 13024 0 0 22585 0 0 14605 0 0 19333 0 0 23549 0 0 20376 0 0 18479 0 0 15270 0 0 7547.9 0 0 21189 0 0 12312 0 0 22693 0 0 15043 0 0 19821 0 0 23156 0 0 20551 0 0 18959 0 0 15284 0 0 7534.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 24770000 0 24770000 0 NaN 1509 913 370 370 3607;3608 3834;3835 4088 4545 4088 4545 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9233 4088 4545 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9233 4088 4545 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9233 Q12912 459 Q12912 Q12912 Lymphoid-restricted membrane protein;Processed lymphoid-restricted membrane protein LRMP sp|Q12912|LRMP_HUMAN Lymphoid-restricted membrane protein OS=Homo sapiens GN=LRMP PE=1 SV=3 0.914976 11.4088 0.0549844 46.159 23.626 46.159 1 S SEPSGEETVERTRKPSLSEKKNNPSKWDVSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX T(0.066)RKPS(0.915)LS(0.019)EK T(-11.41)RKPS(11.41)LS(-16.86)EK 5 3 0.24328 30403 0 0 14145 0 0 29390 0 0 14465 0 0 26149 0 0 28992 0 0 26726 0 0 23461 0 0 14901 0 0 3510.2 0 0 28765 0 0 13364 0 0 29614 0 0 15066 0 0 26725 0 0 28349 0 0 26853 0 0 23853 0 0 15205 0 0 3848.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37405000 37405000 0 0 NaN 1510 913 459 459 4892 5217 5557 6177 5557 6177 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9668 5557 6177 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9668 5557 6177 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9668 Q12968 415 Q12968 Q12968 Nuclear factor of activated T-cells, cytoplasmic 3 NFATC3 sp|Q12968|NFAC3_HUMAN Nuclear factor of activated T-cells, cytoplasmic 3 OS=Homo sapiens GN=NFATC3 PE=1 SV=1 0.353017 0 9.57468E-08 157.07 129.91 157.07 S TWSKPKPGHTPIFRTSSLPPLDWPLPAHFGQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T(0.353)S(0.353)S(0.294)LPPLDWPLPAHFGQCELK T(0)S(0)S(-0.79)LPPLDWPLPAHFGQCELK 2 3 -0.60815 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1511 915 415 415 4963 5291 5634 6261 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23452 5634 6261 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23452 5634 6261 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23452 Q12982 114 Q12982 Q12982 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 BNIP2 sp|Q12982|BNIP2_HUMAN BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 OS=Homo sapiens GN=BNIP2 PE=1 SV=1 0.984293 17.972 0.000183689 103.99 69.894 103.99 1 S DDLPKPKTTEVIRKGSITEYTAAEEKEDGRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX KGS(0.984)IT(0.016)EYTAAEEK KGS(17.97)IT(-17.97)EY(-58.13)T(-53.02)AAEEK 3 3 -0.7933 40069 0 0 28305 0 0 42604 0 0 31509 0 0 40168 0 0 48809 0 0 37647 0 0 47324 0 0 36822 0 0 10987 0 0 37925 0 0 26757 0 0 42720 0 0 32435 0 0 40870 0 0 48154 0 0 38420 0 0 47858 0 0 36368 0 0 11441 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 315830000 315830000 0 0 NaN 1512 917 114 114 2076 2196 2365 2635 2365 2635 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13793 2365 2635 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13793 2365 2635 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13793 Q13029 1484 Q13029 Q13029 PR domain zinc finger protein 2 PRDM2 sp|Q13029|PRDM2_HUMAN PR domain zinc finger protein 2 OS=Homo sapiens GN=PRDM2 PE=1 SV=3 1 50.2837 0.0359635 50.284 14.742 50.284 1 S SLNKHAAFSCPKKPLSPPKKKVSHSSKKGGH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX KPLS(1)PPK KPLS(50.28)PPK 4 3 -0.053179 13121 0 0 13993 0 0 13604 0 0 17573 0 0 13243 0 0 14114 0 0 11176 0 0 13326 0 0 18080 0 0 1949.7 0 0 12418 0 0 13239 0 0 13663 0 0 17769 0 0 13438 0 0 14295 0 0 11665 0 0 13456 0 0 17547 0 0 2144.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15373000 15373000 0 0 NaN 1513 918 1484 1484 2157 2279 2453 2732 2453 2732 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11875 2453 2732 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11875 2453 2732 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11875 Q13029 643 Q13029 Q13029 PR domain zinc finger protein 2 PRDM2 sp|Q13029|PRDM2_HUMAN PR domain zinc finger protein 2 OS=Homo sapiens GN=PRDM2 PE=1 SV=3 0.99911 30.5021 0.000506142 111.27 75.322 111.27 1 S PLGSTNSEAKKRRTASPPALPKIKAETDSDP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX T(0.001)AS(0.999)PPALPK T(-30.5)AS(30.5)PPALPK 3 2 -0.59671 21786 0 0 30158 0 0 22811 0 0 25708 0 0 26346 0 0 20789 0 0 22533 0 0 26097 0 0 27642 0 0 10547 0 0 20619 0 0 28464 0 0 22946 0 0 26589 0 0 26478 0 0 21143 0 0 23260 0 0 26289 0 0 27058 0 0 10536 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26383000 26383000 0 0 NaN 1514 918 643 643 3515;4636 3732;4945 5267 5850 5267 5850 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13969 5267 5850 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13969 5267 5850 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13969 Q13033 229 Q13033 Q13033 Striatin-3 STRN3 sp|Q13033|STRN3_HUMAN Striatin-3 OS=Homo sapiens GN=STRN3 PE=1 SV=3 1 108.709 0.000166639 108.71 82.235 108.71 1 S SVETKNLEQILNGGESPKQKGQEIKRSSGDV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPXXXXXXXXXXX NLEQILNGGES(1)PKQK NLEQILNGGES(108.71)PKQK 11 4 -1.2691 3804.5 0 0 5178.4 0 0 3528.6 0 0 4061.3 0 0 4148 0 0 4102.4 0 0 4752.2 0 0 5003.9 0 0 3867.3 0 0 4482.1 0 0 3599 0 0 4885.5 0 0 3577.7 0 0 4238.9 0 0 4180.6 0 0 4130 0 0 4784.1 0 0 5119.4 0 0 3853.4 0 0 4336.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10077000 10077000 0 0 NaN 1515 919 229 229 2847 3017 3231 3586 3231 3586 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18937 3231 3586 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18937 3231 3586 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18937 Q13045 856 Q13045 Q13045 Protein flightless-1 homolog FLII sp|Q13045|FLII_HUMAN Protein flightless-1 homolog OS=Homo sapiens GN=FLII PE=1 SV=2 0.999993 51.7455 0.000136199 111.65 88.638 111.65 1 S VLTVDYTRNAEAVLQSPGLSGKVKRDAEKKD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPXXXXXXXXX NAEAVLQS(1)PGLSGK NAEAVLQS(51.75)PGLS(-51.75)GK 8 3 0.67592 14926 0 0 19512 0 0 15055 0 0 17597 0 0 11978 0 0 15221 0 0 11742 0 0 16428 0 0 19238 0 0 5178 0 0 14125 0 0 18422 0 0 15114 0 0 18147 0 0 12341 0 0 15388 0 0 12169 0 0 16588 0 0 18664 0 0 5255.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 75457000 75457000 0 0 NaN 1516 920 856 856 2769 2938 3148 3498 3148 3498 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15665 3148 3498 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15665 3148 3498 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15665 Q13045 436 Q13045 Q13045 Protein flightless-1 homolog FLII sp|Q13045|FLII_HUMAN Protein flightless-1 homolog OS=Homo sapiens GN=FLII PE=1 SV=2 1 165.454 3.84137E-07 165.45 133.11 165.45 1 S KDPMARKMRLRRRKDSAQDDQAKQVLKGMSD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX RKDS(1)AQDDQAK RKDS(165.45)AQDDQAK 4 3 -0.32045 19058 0 0 8168 0 0 18147 0 0 8172.1 0 0 17205 0 0 16371 0 0 17719 0 0 15725 0 0 7843.7 0 0 8866.2 0 0 18030 0 0 7716 0 0 18315 0 0 8522.4 0 0 17513 0 0 16052 0 0 17742 0 0 16065 0 0 8158.2 0 0 8712.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 50840000 50840000 0 0 NaN 1517 920 436 436 3290 3491 3728 4141 3728 4141 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5942 3728 4141 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5942 3728 4141 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5942 Q13085 29 Q13085 Q13085 Acetyl-CoA carboxylase 1;Biotin carboxylase ACACA sp|Q13085|ACACA_HUMAN Acetyl-CoA carboxylase 1 OS=Homo sapiens GN=ACACA PE=1 SV=2 0.996642 24.9894 0.00245243 94.259 76.771 94.259 1 S NQHSRFIIGSVSEDNSEDEISNLVKLDLLEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPXXXXXX FIIGSVS(0.003)EDNS(0.997)EDEISNLVK FIIGS(-37.77)VS(-24.99)EDNS(24.99)EDEIS(-44.83)NLVK 11 4 1.719 12791 0 0 10382 0 0 14190 0 0 10157 0 0 9268.8 0 0 15444 0 0 9132.8 0 0 12593 0 0 10873 0 0 85969 0 0 12109 0 0 9806.5 0 0 14148 0 0 10528 0 0 9696.3 0 0 15371 0 0 9350.6 0 0 15332 0 0 10654 0 0 81242 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 46290000 46290000 0 0 NaN 1518 921 29 29 1278 1347 1449 1607;1608 1449 1607 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23659 1449 1607 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23659 1449 1607 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23659 Q13085 80 Q13085 Q13085 Acetyl-CoA carboxylase 1;Biotin carboxylase ACACA sp|Q13085|ACACA_HUMAN Acetyl-CoA carboxylase 1 OS=Homo sapiens GN=ACACA PE=1 SV=2 0.9429 13.7886 0.00130337 97.957 65.459 97.957 1 S SSLQDGLALHIRSSMSGLHLVKQGRDRKKID X;X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX S(0.018)S(0.039)MS(0.943)GLHLVK S(-17.27)S(-13.79)MS(13.79)GLHLVK 4 3 -1.3605 18028 0 0 12643 0 0 18751 0 0 12350 0 0 14207 0 0 24037 0 0 21330 0 0 22742 0 0 14403 0 0 3974.3 0 0 17062 0 0 11942 0 0 18797 0 0 12887 0 0 14780 0 0 23563 0 0 21181 0 0 22982 0 0 14505 0 0 4268.6 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 42205000 42205000 0 0 NaN 1519 921 80 80 4372 4657;4658 4961;4962 5506;5507 4962 5507 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16368 4962 5507 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16368 4962 5507 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16368 Q13098 468 Q13098 Q13098 COP9 signalosome complex subunit 1 GPS1 sp|Q13098|CSN1_HUMAN COP9 signalosome complex subunit 1 OS=Homo sapiens GN=GPS1 PE=1 SV=4 0.999472 32.7735 2.19234E-05 126.86 101.35 126.86 1 S MMLRAAVLRNQIHVKSPPREGSQGELTPANS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.999)PPREGS(0.001)QGELTPANSQSR S(32.77)PPREGS(-32.77)QGELT(-70.18)PANS(-108.78)QS(-108.32)R 1 3 -0.11562 22043 0 0 25155 0 0 22954 0 0 25158 0 0 19608 0 0 20753 0 0 19569 0 0 22843 0 0 25985 0 0 7359.8 0 0 20862 0 0 23763 0 0 23020 0 0 25761 0 0 20101 0 0 21038 0 0 20097 0 0 23054 0 0 25367 0 0 7458.9 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 17489000 17489000 0 0 NaN 1520 922 468 468 4149 4423 4714 5232;5233 4714 5232 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7831 4714 5232 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7831 4714 5232 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7831 Q13111 141 Q13111 Q13111 Chromatin assembly factor 1 subunit A CHAF1A sp|Q13111|CAF1A_HUMAN Chromatin assembly factor 1 subunit A OS=Homo sapiens GN=CHAF1A PE=1 SV=2 0.999723 35.7531 3.23043E-05 137.4 94.679 137.4 1 S QPDSLVDHNKLNSEASPSREAINGQREDTGD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX LNSEAS(1)PSR LNS(-49.68)EAS(35.75)PS(-35.75)R 6 2 -0.43951 17525 0 0 17928 0 0 18627 0 0 17587 0 0 11518 0 0 18585 0 0 12167 0 0 17112 0 0 19793 0 0 2859.5 0 0 16587 0 0 16934 0 0 18607 0 0 18094 0 0 12125 0 0 18571 0 0 12563 0 0 17307 0 0 19206 0 0 3088.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30607000 30607000 0 0 NaN 1521 923 141 141 2486 2625 2819 3146 2819 3146 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7393 2819 3146 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7393 2819 3146 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7393 Q13112 410 Q13112 Q13112 Chromatin assembly factor 1 subunit B CHAF1B sp|Q13112|CAF1B_HUMAN Chromatin assembly factor 1 subunit B OS=Homo sapiens GN=CHAF1B PE=1 SV=1 0.992904 21.4588 7.58918E-11 201.4 168.14 201.4 1 S PDTAKKTKSQTHRGSSPGPRPVEGTPASRTQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX GS(0.007)S(0.993)PGPRPVEGTPASR GS(-21.46)S(21.46)PGPRPVEGT(-85.34)PAS(-118.68)R 3 2 -0.13791 5951.7 0 0 7527.7 0 0 6375 0 0 7775.1 0 0 6061.4 0 0 6336.2 0 0 4940.1 0 0 6460.1 0 0 9090.2 0 0 1120.6 0 0 5633.4 0 0 7112.5 0 0 6389 0 0 7945 0 0 6157.7 0 0 6419 0 0 5196 0 0 6508.9 0 0 8793.3 0 0 1204.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26777000 26777000 0 0 NaN 1522 924 410 410 1637 1724 1863 2076 1863 2076 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6791 1863 2076 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6791 1863 2076 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6791 Q13112 538 Q13112 Q13112 Chromatin assembly factor 1 subunit B CHAF1B sp|Q13112|CAF1B_HUMAN Chromatin assembly factor 1 subunit B OS=Homo sapiens GN=CHAF1B PE=1 SV=1 0.999994 52.1992 5.89235E-13 199.53 185.36 199.53 1 S STEEIQSETPGDAQGSPPELKRPRLDENKGG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX TDTPPSSVPTSVISTPSTEEIQSETPGDAQGS(1)PPELK T(-176.76)DT(-171.83)PPS(-166.93)S(-166.93)VPT(-155.63)S(-149.68)VIS(-127.16)T(-120.62)PS(-99.3)T(-99.3)EEIQS(-66.36)ET(-52.2)PGDAQGS(52.2)PPELK 32 4 0.90608 8246 0 0 10021 0 0 6944 0 0 9429.6 0 0 7410.2 0 0 6877.6 0 0 7598.5 0 0 9919.9 0 0 10427 0 0 45691 0 0 7797.9 0 0 9462.7 0 0 7073.1 0 0 9677.1 0 0 7497.7 0 0 7131.9 0 0 7803 0 0 11209 0 0 10168 0 0 43253 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 33264000 33264000 0 0 NaN 1523 924 538 538 4672 4983 5307 5896;5897;5898 5307 5896 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19312 5307 5896 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19312 5307 5896 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19312 Q13112 429 Q13112 Q13112 Chromatin assembly factor 1 subunit B CHAF1B sp|Q13112|CAF1B_HUMAN Chromatin assembly factor 1 subunit B OS=Homo sapiens GN=CHAF1B PE=1 SV=1 0.656882 3.34298 0.040017 46.877 32.836 46.877 1 S RPVEGTPASRTQDPSSPGTTPPQARQAPAPT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPXXXXXX T(0.003)QDPS(0.304)S(0.657)PGT(0.029)T(0.007)PPQAR T(-23.43)QDPS(-3.34)S(3.34)PGT(-13.58)T(-19.67)PPQAR 6 3 1.7756 16346 0 0 15966 0 0 15830 0 0 14875 0 0 14035 0 0 14423 0 0 14009 0 0 15514 0 0 17965 0 0 3931 0 0 15466 0 0 15076 0 0 15947 0 0 15333 0 0 14352 0 0 14498 0 0 14370 0 0 15638 0 0 17558 0 0 4060.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 38244000 38244000 0 0 NaN 1524 924 429 429 4869 5194 5533 6151 5533 6151 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6842 5533 6151 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6842 5533 6151 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6842 Q13127 864 Q13127 Q13127 RE1-silencing transcription factor REST sp|Q13127|REST_HUMAN RE1-silencing transcription factor OS=Homo sapiens GN=REST PE=1 SV=3 0.994149 22.3063 2.66454E-05 128.74 112.08 128.74 1 S WLLKESVSTEDLSPPSPPLPKENLREEASGD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPXXXXXXXXXX ESVSTEDLS(0.006)PPS(0.994)PPLPK ES(-70.75)VS(-62.42)T(-53.19)EDLS(-22.31)PPS(22.31)PPLPK 12 3 -0.40663 6932.2 0 0 5523.9 0 0 6924 0 0 4620 0 0 5551.3 0 0 7186.6 0 0 5518.9 0 0 6423.2 0 0 4490.9 0 0 8875.9 0 0 6559.6 0 0 5213 0 0 6955.7 0 0 4840.1 0 0 5713.1 0 0 7096.1 0 0 5591.2 0 0 6739.9 0 0 4474.8 0 0 8506.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15572000 15572000 0 0 NaN 1525 925 864 864 1176 1237 1335 1479 1335 1479 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17919 1335 1479 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17919 1335 1479 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17919 Q13129 632 Q13129 Q13129 Zinc finger protein Rlf RLF sp|Q13129|RLF_HUMAN Zinc finger protein Rlf OS=Homo sapiens GN=RLF PE=1 SV=2 0.99586 23.8122 1.03841E-22 259.16 235.72 259.16 1 S KKLLLKGSQKGICPKSPSAIPEQNHSLNDQA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.996)PS(0.004)AIPEQNHSLNDQAK S(23.81)PS(-23.81)AIPEQNHS(-130.86)LNDQAK 1 3 -0.035332 22070 0 0 30359 0 0 20703 0 0 31530 0 0 23850 0 0 22171 0 0 25520 0 0 25516 0 0 34800 0 0 23191 0 0 20879 0 0 28685 0 0 20967 0 0 32152 0 0 24050 0 0 22727 0 0 26151 0 0 26164 0 0 33944 0 0 22427 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 44842000 44842000 0 0 NaN 1526 926 632 632 4167 4442 4734 5253 4734 5253 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10847 4734 5253 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10847 4734 5253 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10847 Q13131 496 Q13131 Q13131 5'-AMP-activated protein kinase catalytic subunit alpha-1 PRKAA1 sp|Q13131|AAPK1_HUMAN 5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Homo sapiens GN=PRKAA1 PE=1 SV=4 0.721503 5.11135 0.00895338 87.942 58.275 87.942 1 S ITEAKSGTATPQRSGSVSNYRSCQRSDSDAE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX S(0.222)GS(0.722)VS(0.056)NYR S(-5.11)GS(5.11)VS(-11.09)NY(-58.79)R 3 2 -0.52047 47034 0 0 46212 0 0 48177 0 0 42314 0 0 46190 0 0 54170 0 0 43691 0 0 46683 0 0 48739 0 0 3280.9 0 0 44511 0 0 43632 0 0 48416 0 0 43875 0 0 46960 0 0 53681 0 0 44732 0 0 47215 0 0 47877 0 0 4169.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 73309000 73309000 0 0 NaN 1527 927 496 496 3822 4074 4347 4829 4347 4829 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7026 4347 4829 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7026 4347 4829 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7026 Q13136 708 Q13136 Q13136 Liprin-alpha-1 PPFIA1 sp|Q13136|LIPA1_HUMAN Liprin-alpha-1 OS=Homo sapiens GN=PPFIA1 PE=1 SV=1 1 71.1532 0.0126022 71.153 56.935 71.153 1 S SPPGSGRSTPRRIPHSPAREVDRLGVMTLLP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX RIPHS(1)PAR RIPHS(71.15)PAR 5 3 -0.50743 10500 0 0 11026 0 0 11099 0 0 11360 0 0 10195 0 0 10322 0 0 9291.8 0 0 10850 0 0 12772 0 0 3681.8 0 0 9937.6 0 0 10418 0 0 11129 0 0 11627 0 0 10390 0 0 10406 0 0 9596.9 0 0 10974 0 0 12454 0 0 3718 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9145500 9145500 0 0 NaN 1528 928 708 708 3278 3478 3715 4128 3715 4128 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5666 3715 4128 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5666 3715 4128 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5666 Q13136 1172 Q13136 Q13136 Liprin-alpha-1 PPFIA1 sp|Q13136|LIPA1_HUMAN Liprin-alpha-1 OS=Homo sapiens GN=PPFIA1 PE=1 SV=1 0.868569 8.89007 0.00015339 105.14 86.079 105.14 1 S AETLPANFRVTSSMSSPSMQPKKMQMDGNVS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPXXXXXXXXX VT(0.008)S(0.006)S(0.005)MS(0.112)S(0.869)PSMQPK VT(-20.38)S(-21.5)S(-22.61)MS(-8.89)S(8.89)PS(-33.25)MQPK 7 3 -1.1929 9139.2 0 0 8790 0 0 10013 0 0 10091 0 0 6481 0 0 9771.3 0 0 6577.1 0 0 8601.6 0 0 9758.3 0 0 4676.8 0 0 8651.3 0 0 8311.1 0 0 9989.6 0 0 10277 0 0 6789.9 0 0 9802.7 0 0 6777.4 0 0 8814.3 0 0 9493.5 0 0 4602.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11314000 11314000 0 0 NaN 1529 928 1172 1172 5300 5647 6019 6686 6019 6686 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13161 6019 6686 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13161 6019 6686 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13161 Q13144 544 Q13144 Q13144 Translation initiation factor eIF-2B subunit epsilon EIF2B5 sp|Q13144|EI2BE_HUMAN Translation initiation factor eIF-2B subunit epsilon OS=Homo sapiens GN=EIF2B5 PE=1 SV=3 1 120.895 6.69731E-09 172.83 152.93 120.9 1 S SEQSMDSEEPDSRGGSPQMDDIKVFQNEVLG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP GGS(1)PQMDDIK GGS(120.9)PQMDDIK 3 2 0.041635 75797 0 0 103730 0 0 80233 0 0 104670 0 0 104860 0 0 75953 0 0 113190 0 0 110420 0 0 113200 0 0 122050 0 0 71740 0 0 97992 0 0 80852 0 0 106960 0 0 105080 0 0 78075 0 0 114820 0 0 113100 0 0 111690 0 0 117480 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 174690000 174690000 0 0 NaN 1530 929 544 544 1453;1454 1530;1531 1652;1653 1831;1832;1833 1652 1832 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12726 1653 1833 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23529 1653 1833 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23529 Q13151 188 Q13151 Q13151 Heterogeneous nuclear ribonucleoprotein A0 HNRNPA0 sp|Q13151|ROA0_HUMAN Heterogeneous nuclear ribonucleoprotein A0 OS=Homo sapiens GN=HNRNPA0 PE=1 SV=1 1 82.2398 0.000156502 118.26 105.28 118.26 1 S AVPKEDIYSGGGGGGSRSSRGGRGGRGRGGG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPXXXXXXXXXXXXXX EDIYSGGGGGGS(1)R EDIY(-109.53)S(-82.24)GGGGGGS(82.24)R 12 2 -1.8947 23088 0 0 18283 0 0 23421 0 0 20651 0 0 19588 0 0 24821 0 0 22042 0 0 20511 0 0 19331 0 0 10087 0 0 21848 0 0 17285 0 0 23522 0 0 21126 0 0 20137 0 0 24658 0 0 22245 0 0 21045 0 0 19188 0 0 9972.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10651000 10651000 0 0 NaN 1531 930 188 188 901 954 1034 1142 1034 1142 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9177 1034 1142 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9177 1034 1142 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9177 Q13158 194 Q13158 Q13158 FAS-associated death domain protein FADD sp|Q13158|FADD_HUMAN FAS-associated death domain protein OS=Homo sapiens GN=FADD PE=1 SV=1 0.817763 6.90059 6.64565E-11 191.49 166.7 191.49 1 S EVQQARDLQNRSGAMSPMSWNSDASTSEAS_ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPX S(0.015)GAMS(0.818)PMS(0.167)WNSDASTSEAS S(-17.28)GAMS(6.9)PMS(-6.9)WNS(-87.34)DAS(-138.64)T(-147.27)S(-150.92)EAS(-153.23) 5 2 -0.04128 4758.8 0 0 4053.1 0 0 4465.8 0 0 3762.9 0 0 3839.7 0 0 4100 0 0 4336.2 0 0 5008.9 0 0 4258.3 0 0 43502 0 0 4501.9 0 0 3827.2 0 0 4507 0 0 3886.8 0 0 3940.5 0 0 4187.9 0 0 4387.9 0 0 6299.8 0 0 4205 0 0 41078 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18557000 18557000 0 0 NaN 1532 932 194 194 3772 4013 4278 4753 4278 4753 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17422 4278 4753 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17422 4278 4753 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17422 Q13177 64 Q13177 Q13177 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 PAK2 sp|Q13177|PAK2_HUMAN Serine/threonine-protein kinase PAK 2 OS=Homo sapiens GN=PAK2 PE=1 SV=3 0.999743 36.6281 0.000163227 102.58 42.679 102.58 1 S PRHKIISIFSGTEKGSKKKEKERPEISPPSD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPXXXXXXXXXXXXXX IISIFSGTEKGS(1)K IIS(-50.88)IFS(-45.08)GT(-36.63)EKGS(36.63)K 12 3 -0.11152 7184.4 0 0 8021.9 0 0 8094.7 0 0 7626.2 0 0 7669 0 0 8428.6 0 0 8563.7 0 0 9248.5 0 0 8696.1 0 0 13095 0 0 6801.7 0 0 7575.8 0 0 8095 0 0 7867.3 0 0 7820.4 0 0 8447.6 0 0 8677.7 0 0 9639.7 0 0 8574.8 0 0 12544 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10876000 10876000 0 0 NaN 1533 933 64 64 1863 1967 2125 2382 2125 2382 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21884 2125 2382 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21884 2125 2382 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21884 Q13177 2 Q13177 Q13177 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 PAK2 sp|Q13177|PAK2_HUMAN Serine/threonine-protein kinase PAK 2 OS=Homo sapiens GN=PAK2 PE=1 SV=3 1 63.631 0.00344191 63.631 54.261 63.631 1 S ______________MSDNGELEDKPPAPPVR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(1)DNGELEDKPPAPPVR S(63.63)DNGELEDKPPAPPVR 1 3 1.0392 27074 0 0 29340 0 0 30704 0 0 33528 0 0 29183 0 0 30289 0 0 28265 0 0 29503 0 0 31639 0 0 18477 0 0 25633 0 0 27740 0 0 30688 0 0 34117 0 0 29695 0 0 30530 0 0 28908 0 0 30181 0 0 31075 0 0 18081 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 32481000 32481000 0 0 NaN 1534 933 2 2 3665 3900 4159 4623;4624 4159 4624 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13183 4159 4624 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13183 4159 4624 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13183 Q13177 141 Q13177 Q13177 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 PAK2 sp|Q13177|PAK2_HUMAN Serine/threonine-protein kinase PAK 2 OS=Homo sapiens GN=PAK2 PE=1 SV=3 0.969506 15.64 1.09918E-11 183.69 165.19 71.066 1 S VLKFYDSNTVKQKYLSFTPPEKDGFPSGTPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP Y(0.004)LS(0.97)FT(0.026)PPEK Y(-23.81)LS(15.64)FT(-15.64)PPEK 3 3 0.24729 21304 0 0 8016.3 0 0 22725 0 0 7871.5 0 0 11473 0 0 20299 0 0 12424 0 0 15385 0 0 7895 0 0 15354 0 0 20164 0 0 7571.9 0 0 22665 0 0 8290.7 0 0 12317 0 0 19760 0 0 12477 0 0 16085 0 0 7982 0 0 14813 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 106130000 106130000 0 0 NaN 1535 933 141 141 5397;5398 5749;5750 6136;6137 6823;6824 6136 6823 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19660 6137 6824 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21692 6137 6824 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21692 Q13185 176 Q13185 Q13185 Chromobox protein homolog 3 CBX3 sp|Q13185|CBX3_HUMAN Chromobox protein homolog 3 OS=Homo sapiens GN=CBX3 PE=1 SV=4 0.999999 59.2378 3.09248E-23 281.01 271.22 281.01 1 S PQIVIAFYEERLTWHSCPEDEAQ________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX LTWHS(1)CPEDEAQ LT(-59.24)WHS(59.24)CPEDEAQ 5 2 -0.69498 16853 0 0 17685 0 0 17725 0 0 18784 0 0 61027 0 0 18106 0 0 69073 0 0 36152 0 0 17606 0 0 23581 0 0 15951 0 0 16713 0 0 18343 0 0 19209 0 0 59439 0 0 18449 0 0 68514 0 0 36274 0 0 19555 0 0 23041 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 1015600000 1015600000 0 0 NaN 1536 934 176 176 2642 2789 2990 3327;3328 2990 3327 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14467 2990 3327 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14467 2990 3327 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14467 Q13185 93 Q13185 Q13185 Chromobox protein homolog 3 CBX3 sp|Q13185|CBX3_HUMAN Chromobox protein homolog 3 OS=Homo sapiens GN=CBX3 PE=1 SV=4 0.998217 27.4943 1.12425E-29 301.26 261.92 151.95 1 S NSQKAGKEKDGTKRKSLSDSESDDSKSKKKR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX RKS(0.998)LS(0.002)DSESDDSK RKS(27.49)LS(-27.49)DS(-52.58)ES(-71.49)DDS(-82.88)K 3 3 0.61177 86374 0 0 91665 0 0 90633 0 0 90696 0 0 70436 0 0 94994 0 0 79911 0 0 87500 0 0 97654 0 0 11086 0 0 81748 0 0 86587 0 0 90788 0 0 93252 0 0 72822 0 0 94952 0 0 81374 0 0 88394 0 0 95603 0 0 12464 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 224750000 224750000 0 0 5.136 1537 934 93 93 3304;3979 3505;4240 3742;4524 4158;5027 3742 4158 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7773 4524 5027 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9251 4524 5027 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9251 Q13185 95 Q13185 Q13185 Chromobox protein homolog 3 CBX3 sp|Q13185|CBX3_HUMAN Chromobox protein homolog 3 OS=Homo sapiens GN=CBX3 PE=1 SV=4 0.993903 22.1842 1.56305E-39 346.31 277.83 346.31 1 S QKAGKEKDGTKRKSLSDSESDDSKSKKKRDA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX S(0.006)LS(0.994)DSESDDSK S(-22.18)LS(22.18)DS(-40.61)ES(-101.61)DDS(-129.07)K 3 2 0.075824 162540 0 0 179010 0 0 166440 0 0 174600 0 0 234610 0 0 167910 0 0 236780 0 0 207700 0 0 191300 0 0 34106 0 0 153820 0 0 169080 0 0 168210 0 0 179440 0 0 234050 0 0 169170 0 0 239680 0 0 207820 0 0 190680 0 0 36922 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 248870000 248870000 0 0 5.6871 1538 934 95 95 3304;3979 3505;4240 4525 5028;5029;5030;5031 4525 5029 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9651 4525 5029 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9651 4525 5029 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9651 Q13200 16 Q13200 Q13200 26S proteasome non-ATPase regulatory subunit 2 PSMD2 sp|Q13200|PSMD2_HUMAN 26S proteasome non-ATPase regulatory subunit 2 OS=Homo sapiens GN=PSMD2 PE=1 SV=3 0.999999 62.8348 2.86636E-05 127.15 107.39 127.15 1 S MEEGGRDKAPVQPQQSPAAAPGGTDEKPSGK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPPP APVQPQQS(1)PAAAPGGTDEKPSGK APVQPQQS(62.83)PAAAPGGT(-62.83)DEKPS(-73.89)GK 8 4 0.20538 11493 0 0 13929 0 0 10570 0 0 14309 0 0 14519 0 0 12557 0 0 11716 0 0 12447 0 0 16962 0 0 7129.1 0 0 10871 0 0 13161 0 0 10740 0 0 14641 0 0 14467 0 0 12677 0 0 12204 0 0 12704 0 0 16513 0 0 7001 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 51881000 51881000 0 0 NaN 1539 935 16 16 385 412 447 496 447 496 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10818 447 496 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10818 447 496 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10818 Q13200 361 Q13200 Q13200 26S proteasome non-ATPase regulatory subunit 2 PSMD2 sp|Q13200|PSMD2_HUMAN 26S proteasome non-ATPase regulatory subunit 2 OS=Homo sapiens GN=PSMD2 PE=1 SV=3 0.828655 6.84504 1.84987E-11 208.18 183.8 208.18 1 S DDIYKTHLENNRFGGSGSQVDSARMNLASSF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX FGGS(0.829)GS(0.171)QVDSAR FGGS(6.85)GS(-6.85)QVDS(-92.43)AR 4 2 -0.32687 20720 0 0 31942 0 0 22002 0 0 29965 0 0 20903 0 0 20689 0 0 22093 0 0 23734 0 0 31495 0 0 5499.1 0 0 19612 0 0 30163 0 0 22070 0 0 30739 0 0 21303 0 0 21201 0 0 22689 0 0 23854 0 0 30678 0 0 5727.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26631000 26631000 0 0 NaN 1540 935 361 361 1264 1330 1432 1589 1432 1589 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10124 1432 1589 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10124 1432 1589 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10124 Q13206 831 Q13206 Q13206 Probable ATP-dependent RNA helicase DDX10 DDX10 sp|Q13206|DDX10_HUMAN Probable ATP-dependent RNA helicase DDX10 OS=Homo sapiens GN=DDX10 PE=1 SV=2 0.746944 4.70071 3.75499E-08 174.29 154.99 174.29 1 S ISDTKKKQGMKKRSNSEVEDVGPTSHNRKKA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX S(0.253)NS(0.747)EVEDVGPTSHNR S(-4.7)NS(4.7)EVEDVGPT(-121.86)S(-129.85)HNR 3 3 -1.314 9870.3 0 0 11089 0 0 9273.6 0 0 11176 0 0 11001 0 0 8318.4 0 0 12317 0 0 9983.9 0 0 10128 0 0 3945 0 0 9337.6 0 0 10476 0 0 9395.9 0 0 11424 0 0 11079 0 0 8493.8 0 0 12415 0 0 10069 0 0 10086 0 0 3945.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 34461000 34461000 0 0 NaN 1541 936 831 831 4053 4321 4610 5120 4610 5120 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7802 4610 5120 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7802 4610 5120 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7802 Q13233 21 Q13233 Q13233 Mitogen-activated protein kinase kinase kinase 1 MAP3K1 sp|Q13233|M3K1_HUMAN Mitogen-activated protein kinase kinase kinase 1 OS=Homo sapiens GN=MAP3K1 PE=1 SV=4 0.992867 21.436 9.83991E-08 173.54 137.81 173.54 1 S GNRASSSGFPGARATSPEAGGGGGALKASSA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX AT(0.007)S(0.993)PEAGGGGGALK AT(-21.44)S(21.44)PEAGGGGGALK 3 2 0.31839 46680 0 0 19459 0 0 46565 0 0 19544 0 0 17015 0 0 46857 0 0 22378 0 0 28174 0 0 22187 0 0 5609.4 0 0 44171 0 0 18382 0 0 46544 0 0 20501 0 0 19087 0 0 45525 0 0 22516 0 0 29153 0 0 21900 0 0 5934 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27538000 27538000 0 0 NaN 1542 937 21 21 535 569 610 682 610 682 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10560 610 682 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10560 610 682 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10560 Q13233 923 Q13233 Q13233 Mitogen-activated protein kinase kinase kinase 1 MAP3K1 sp|Q13233|M3K1_HUMAN Mitogen-activated protein kinase kinase kinase 1 OS=Homo sapiens GN=MAP3K1 PE=1 SV=4 0.499904 0 1.00286E-14 219.74 174.92 219.74 1 S LEKTGKGLCATKLSASSEDISERLASISVGP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX LSAS(0.5)S(0.5)EDISER LS(-34.16)AS(0)S(0)EDIS(-66.49)ER 4 2 -0.69757 67957 0 0 55725 0 0 70734 0 0 53658 0 0 46519 0 0 67693 0 0 50304 0 0 56660 0 0 56081 0 0 26772 0 0 64315 0 0 52630 0 0 70776 0 0 55446 0 0 48696 0 0 67138 0 0 51182 0 0 58069 0 0 55090 0 0 26521 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 29007000 29007000 0 0 NaN 1543 937 923 923 2548 2692 2889 3221;3222 2889 3222 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11492 2889 3222 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11492 2889 3222 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11492 Q13233 924 Q13233 Q13233 Mitogen-activated protein kinase kinase kinase 1 MAP3K1 sp|Q13233|M3K1_HUMAN Mitogen-activated protein kinase kinase kinase 1 OS=Homo sapiens GN=MAP3K1 PE=1 SV=4 0.499904 0 1.00286E-14 219.74 174.92 219.74 1 S EKTGKGLCATKLSASSEDISERLASISVGPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LSAS(0.5)S(0.5)EDISER LS(-34.16)AS(0)S(0)EDIS(-66.49)ER 5 2 -0.69757 67957 0 0 55725 0 0 70734 0 0 53658 0 0 46519 0 0 67693 0 0 50304 0 0 56660 0 0 56081 0 0 26772 0 0 64315 0 0 52630 0 0 70776 0 0 55446 0 0 48696 0 0 67138 0 0 51182 0 0 58069 0 0 55090 0 0 26521 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 29007000 29007000 0 0 NaN 1544 937 924 924 2548 2692 2889 3221;3222 2889 3222 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11492 2889 3222 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11492 2889 3222 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11492 Q13242 204 Q13242 Q13242 Serine/arginine-rich splicing factor 9 SRSF9 sp|Q13242|SRSF9_HUMAN Serine/arginine-rich splicing factor 9 OS=Homo sapiens GN=SRSF9 PE=1 SV=1 0.999852 38.2918 6.60917E-06 145.41 124.5 145.41 1 S SYGYSRSRSGSRGRDSPYQSRGSPHYFSPFR Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX GRDS(1)PYQSR GRDS(38.29)PY(-67.67)QS(-38.29)R 4 2 -0.020758 4613.9 0 0 4901.7 0 0 5222.5 0 0 4757.6 0 0 3608.3 0 0 5913.8 0 0 5216.8 0 0 4882.9 0 0 4480.6 0 0 11559 0 0 4368.2 0 0 4629.6 0 0 5207.1 0 0 4912.3 0 0 3779.1 0 0 5884.9 0 0 5212.9 0 0 5286.2 0 0 4452.3 0 0 10997 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27495000 27495000 0 0 NaN 1545 938 204 204 1582 1667 1802 2003 1802 2003 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5089 1802 2003 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5089 1802 2003 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5089 Q13242 211 Q13242 Q13242 Serine/arginine-rich splicing factor 9 SRSF9 sp|Q13242|SRSF9_HUMAN Serine/arginine-rich splicing factor 9 OS=Homo sapiens GN=SRSF9 PE=1 SV=1 0.999985 48.0556 4.71417E-11 191.06 162.85 144.3 1;2 S RSGSRGRDSPYQSRGSPHYFSPFRPY_____ X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPXXXXX GS(1)PHYFS(0.969)PFRPY(0.031) GS(48.06)PHY(-40.43)FS(14.92)PFRPY(-14.92) 2 3 -0.33788 22816 31034 0 36659 35628 0 27177 34503 0 33588 33412 0 24637 28483 0 34421 36232 0 40032 31281 0 42291 38040 0 29943 37386 0 29962 141660 0 21607 29379 0 34613 33644 0 27113 34474 0 34688 34487 0 25360 29306 0 34620 36481 0 39734 31874 0 43018 42355 0 29972 36630 0 29191 134270 0 3 5 0 3 5 0 3 5 0 3 5 0 3 5 0 3 5 0 3 5 0 3 5 0 3 5 0 3 5 0 932670000 827300000 105370000 0 NaN 1546 938 211 211 1620 1706;1707 1843;1844;1845 2050;2051;2052;2053;2054;2055;2056;2057 1844 2053 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20907 1843 2050 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18873 1843 2050 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18873 Q13242 216 Q13242 Q13242 Serine/arginine-rich splicing factor 9 SRSF9 sp|Q13242|SRSF9_HUMAN Serine/arginine-rich splicing factor 9 OS=Homo sapiens GN=SRSF9 PE=1 SV=1 0.96874 14.9243 3.8736E-07 144.3 118.16 144.3 2 S GRDSPYQSRGSPHYFSPFRPY__________ X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX GS(1)PHYFS(0.969)PFRPY(0.031) GS(48.06)PHY(-40.43)FS(14.92)PFRPY(-14.92) 7 3 -0.33788 0 31034 0 0 35628 0 0 34503 0 0 33412 0 0 28483 0 0 36232 0 0 31281 0 0 38040 0 0 37386 0 0 141660 0 0 29379 0 0 33644 0 0 34474 0 0 34487 0 0 29306 0 0 36481 0 0 31874 0 0 42355 0 0 36630 0 0 134270 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 105370000 0 105370000 0 NaN 1547 938 216 216 1620 1706;1707 1844;1845 2053;2054;2055;2056;2057 1844 2053 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20907 1844 2053 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20907 1844 2053 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20907 Q13242 189 Q13242 Q13242 Serine/arginine-rich splicing factor 9 SRSF9 sp|Q13242|SRSF9_HUMAN Serine/arginine-rich splicing factor 9 OS=Homo sapiens GN=SRSF9 PE=1 SV=1 0.872734 10.7011 0.0333901 62.894 54.45 62.894 2 S EGETSYIRVYPERSTSYGYSRSRSGSRGRDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY) XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX S(0.052)T(0.074)S(0.873)Y(0.001)GYS(1)R S(-12.25)T(-10.7)S(10.7)Y(-30)GY(-39.09)S(39.09)R 3 2 0.59851 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1548 938 189 189 4536 4837;4838 5155 5724 5155 5724 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8099 5155 5724 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8099 5155 5724 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8099 Q13242 193 Q13242 Q13242 Serine/arginine-rich splicing factor 9 SRSF9 sp|Q13242|SRSF9_HUMAN Serine/arginine-rich splicing factor 9 OS=Homo sapiens GN=SRSF9 PE=1 SV=1 0.999999 60.2845 0.0027296 99.257 84.583 99.257 1;2 S SYIRVYPERSTSYGYSRSRSGSRGRDSPYQS X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXPPPPPPPPXXXXXXXXXXXXXX STSYGYS(1)R S(-87.65)T(-83.84)S(-70.36)Y(-83.76)GY(-60.28)S(60.28)R 7 2 0.014669 46884 0 0 50507 0 0 48909 0 0 39506 0 0 45145 0 0 55285 0 0 57392 0 0 50439 0 0 46513 0 0 3356.5 0 0 44372 0 0 47649 0 0 49109 0 0 41488 0 0 46198 0 0 54656 0 0 57534 0 0 50883 0 0 46355 0 0 4327.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 122550000 122550000 0 0 NaN 1549 938 193 193 4536 4837;4838 5154;5155 5723;5724 5154 5723 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7535 5154 5723 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7535 5154 5723 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7535 Q13243 250 Q13243 Q13243 Serine/arginine-rich splicing factor 5 SRSF5 sp|Q13243|SRSF5_HUMAN Serine/arginine-rich splicing factor 5 OS=Homo sapiens GN=SRSF5 PE=1 SV=1 0.999624 35.3711 2.00187E-06 161.87 111.84 161.87 1 S VPEKSQKRGSSSRSKSPASVDRQRSRSRSRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX SKS(1)PASVDR S(-35.37)KS(35.37)PAS(-40.66)VDR 3 3 0.36867 31007 0 0 32479 0 0 29908 0 0 31024 0 0 43697 0 0 32480 0 0 45006 0 0 31642 0 0 36269 0 0 3924.5 0 0 29336 0 0 30673 0 0 30350 0 0 31967 0 0 43540 0 0 32488 0 0 45510 0 0 31890 0 0 36157 0 0 4427.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 56663000 56663000 0 0 NaN 1550 939 250 250 3903 4160 4440 4935 4440 4935 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6718 4440 4935 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6718 4440 4935 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6718 Q13247 314 Q13247 Q13247 Serine/arginine-rich splicing factor 6 SRSF6 sp|Q13247|SRSF6_HUMAN Serine/arginine-rich splicing factor 6 OS=Homo sapiens GN=SRSF6 PE=1 SV=2 1 61.3533 0.000774396 104.79 71.954 61.353 1;2 S SRSNSPLPVPPSKARSVSPPPKRATSRSRSR X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX S(1)VS(1)PPPKR S(61.35)VS(61.35)PPPKR 1 3 -0.099744 21725 398600 0 18559 280010 0 22473 423870 0 17971 281120 0 18189 267280 0 21519 386270 0 19866 263400 0 19118 322810 0 18634 309080 0 2146.7 26346 0 20560 377280 0 17528 264520 0 22537 423440 0 18545 290270 0 18733 280470 0 21385 381730 0 20107 269560 0 19335 327050 0 18439 303030 0 2463.9 32279 0 1 10 0 1 10 0 1 10 0 1 10 0 1 10 0 1 10 0 1 10 0 1 10 0 1 10 0 1 10 0 472160000 25768000 446390000 0 NaN 1551 940 314 314 429;430;4569;4570 458;459;4873;4874;4875 493;494;5190;5191;5192;5193 549;550;551;552;553;554;5763;5764;5765;5766;5767;5768 5193 5768 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8479 5192 5766 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8032 5192 5766 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8032 Q13247 316 Q13247 Q13247 Serine/arginine-rich splicing factor 6 SRSF6 sp|Q13247|SRSF6_HUMAN Serine/arginine-rich splicing factor 6 OS=Homo sapiens GN=SRSF6 PE=1 SV=2 1 61.3533 0.000774396 104.79 71.954 61.353 2 S SNSPLPVPPSKARSVSPPPKRATSRSRSRSR X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX S(1)VS(1)PPPKR S(61.35)VS(61.35)PPPKR 3 3 -0.099744 0 398600 0 0 280010 0 0 423870 0 0 281120 0 0 267280 0 0 386270 0 0 263400 0 0 322810 0 0 309080 0 0 26346 0 0 377280 0 0 264520 0 0 423440 0 0 290270 0 0 280470 0 0 381730 0 0 269560 0 0 327050 0 0 303030 0 0 32279 0 0 10 0 0 10 0 0 10 0 0 10 0 0 10 0 0 10 0 0 10 0 0 10 0 0 10 0 0 10 0 446390000 0 446390000 0 NaN 1552 940 316 316 429;430;4569;4570 458;459;4873;4874;4875 493;494;5192;5193 549;550;551;552;553;554;5765;5766;5767;5768 5193 5768 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8479 5192 5766 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8032 5192 5766 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8032 Q13247 265 Q13247 Q13247 Serine/arginine-rich splicing factor 6 SRSF6 sp|Q13247|SRSF6_HUMAN Serine/arginine-rich splicing factor 6 OS=Homo sapiens GN=SRSF6 PE=1 SV=2 0.993195 21.642 0.00732526 84.188 55.984 84.188 1 S KPKSDRGSHSHSRSRSKDEYEKSRSRSRSRS X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX S(0.993)KDEY(0.007)EK S(21.64)KDEY(-21.64)EK 1 3 -0.47351 32218 0 0 25766 0 0 33233 0 0 25085 0 0 20722 0 0 32228 0 0 21112 0 0 26160 0 0 27662 0 0 4130.4 0 0 30490 0 0 24337 0 0 33253 0 0 25913 0 0 21779 0 0 31916 0 0 21651 0 0 26600 0 0 27016 0 0 4494.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 66565000 66565000 0 0 NaN 1553 940 265 265 3880 4134 4411 4905 4411 4905 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9241 4411 4905 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9241 4411 4905 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9241 Q13247 253 Q13247 Q13247 Serine/arginine-rich splicing factor 6 SRSF6 sp|Q13247|SRSF6_HUMAN Serine/arginine-rich splicing factor 6 OS=Homo sapiens GN=SRSF6 PE=1 SV=2 0.999278 31.413 0.0321352 59.426 29.953 59.426 1 S SKGRKSRSKSKSKPKSDRGSHSHSRSRSKDE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX S(0.001)KPKS(0.999)DR S(-31.41)KPKS(31.41)DR 5 3 -0.11791 11832 0 0 7432.6 0 0 11219 0 0 7679.7 0 0 7143.5 0 0 10371 0 0 6491.3 0 0 8965.2 0 0 8995.3 0 0 3007.4 0 0 11193 0 0 7022.7 0 0 11281 0 0 7913.5 0 0 7483.1 0 0 10264 0 0 6707.5 0 0 9137.9 0 0 8769.5 0 0 3039.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10890000 10890000 0 0 NaN 1554 940 253 253 3893 4148 4427 4921 4427 4921 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5656 4427 4921 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5656 4427 4921 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5656 Q13247 303 Q13247 Q13247 Serine/arginine-rich splicing factor 6 SRSF6 sp|Q13247|SRSF6_HUMAN Serine/arginine-rich splicing factor 6 OS=Homo sapiens GN=SRSF6 PE=1 SV=2 0.999898 39.9076 6.92999E-07 157.67 139.36 157.67 1 S DIKSKSRSRSQSRSNSPLPVPPSKARSVSPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX SNS(1)PLPVPPSK S(-39.91)NS(39.91)PLPVPPS(-93.91)K 3 2 0.10319 175290 0 0 115860 0 0 191740 0 0 106830 0 0 82172 0 0 178160 0 0 91807 0 0 136790 0 0 116270 0 0 61833 0 0 165930 0 0 109400 0 0 190810 0 0 111390 0 0 90017 0 0 175000 0 0 93658 0 0 140670 0 0 113680 0 0 61389 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 338090000 338090000 0 0 NaN 1555 940 303 303 4062 4332 4621;4622 5131;5132;5133;5134;5135 4622 5135 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14394 4622 5135 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14394 4622 5135 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14394 Q13257 195 Q13257 Q13257 Mitotic spindle assembly checkpoint protein MAD2A MAD2L1 sp|Q13257|MD2L1_HUMAN Mitotic spindle assembly checkpoint protein MAD2A OS=Homo sapiens GN=MAD2L1 PE=1 SV=1 1 64.1837 0.00598127 93.345 64.387 93.345 1 S EVRLRSFTTTIHKVNSMVAYKIPVND_____ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX VNS(1)MVAYK VNS(64.18)MVAY(-64.18)K 3 2 1.0223 19306 0 0 9736.4 0 0 20181 0 0 9486.9 0 0 11232 0 0 22857 0 0 11485 0 0 15201 0 0 9426.9 0 0 7468.5 0 0 18272 0 0 9196.2 0 0 20162 0 0 9970.9 0 0 11929 0 0 22232 0 0 11622 0 0 15770 0 0 9388.8 0 0 7384.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17535000 17535000 0 0 NaN 1556 941 195 195 5194 5537 5901 6557 5901 6557 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15764 5901 6557 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15764 5901 6557 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15764 Q13263 19 Q13263 Q13263 Transcription intermediary factor 1-beta TRIM28 sp|Q13263|TIF1B_HUMAN Transcription intermediary factor 1-beta OS=Homo sapiens GN=TRIM28 PE=1 SV=5 0.999515 33.1459 3.07342E-45 215.82 192.82 207.53 1 S SAAAASAAAASAASGSPGPGEGSAGGEKRST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPPXX AASAAAASAAAASAASGS(1)PGPGEGSAGGEKR AAS(-106.14)AAAAS(-111.03)AAAAS(-63.31)AAS(-33.15)GS(33.15)PGPGEGS(-70.15)AGGEKR 18 3 0.24112 17532 0 0 20898 0 0 18872 0 0 21055 0 0 26034 0 0 20312 0 0 23978 0 0 23481 0 0 22725 0 0 68496 0 0 16594 0 0 19742 0 0 19010 0 0 21597 0 0 25966 0 0 20562 0 0 24472 0 0 25494 0 0 22476 0 0 65041 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2302300000 2302300000 0 0 NaN 1557 942 19 19 58;59 62;63 67;68 79;80 68 80 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13545 67 79 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14906 67 79 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14906 Q13263 823 Q13263 Q13263 Transcription intermediary factor 1-beta TRIM28 sp|Q13263|TIF1B_HUMAN Transcription intermediary factor 1-beta OS=Homo sapiens GN=TRIM28 PE=1 SV=5 0.445548 0 0.0102399 71.528 50.935 66.593 S VLVEPPPMSLPGAGLSSQELSGGPGDGP___ X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPXXX FSAVLVEPPPMS(0.007)LPGAGLS(0.446)S(0.446)QELS(0.102)GGPGDGP FS(-47.68)AVLVEPPPMS(-17.96)LPGAGLS(0)S(0)QELS(-6.41)GGPGDGP 19 3 0.0090064 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1558 942 823 823 1316 1387;1389 1495 1657 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24257 1493 1655 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23913 1493 1655 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23913 Q13263 824 Q13263 Q13263 Transcription intermediary factor 1-beta TRIM28 sp|Q13263|TIF1B_HUMAN Transcription intermediary factor 1-beta OS=Homo sapiens GN=TRIM28 PE=1 SV=5 0.445548 0 0.0102399 71.528 50.935 66.593 S LVEPPPMSLPGAGLSSQELSGGPGDGP____ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FSAVLVEPPPMS(0.007)LPGAGLS(0.446)S(0.446)QELS(0.102)GGPGDGP FS(-47.68)AVLVEPPPMS(-17.96)LPGAGLS(0)S(0)QELS(-6.41)GGPGDGP 20 3 0.0090064 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1559 942 824 824 1316 1387;1389 1495 1657 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24257 1493 1655 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23913 1493 1655 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23913 Q13263 594 Q13263 Q13263 Transcription intermediary factor 1-beta TRIM28 sp|Q13263|TIF1B_HUMAN Transcription intermediary factor 1-beta OS=Homo sapiens GN=TRIM28 PE=1 SV=5 0.852997 7.69523 1.82585E-18 224.26 208.86 224.26 1 S MALAEGPGAEGPRLASPSGSTSSGLEVVAPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP LAS(0.853)PS(0.145)GS(0.002)TSSGLEVVAPEGTSAPGGGPGTLDDSATICR LAS(7.7)PS(-7.7)GS(-26.47)T(-42.42)S(-49.8)S(-57.1)GLEVVAPEGT(-145.97)S(-151.72)APGGGPGT(-190.03)LDDS(-203.89)AT(-209.52)ICR 3 4 0.81993 4397.7 0 0 5138.1 0 0 6195 0 0 5606.4 0 0 7376.4 0 0 4554.6 0 0 7729.6 0 0 7361 0 0 5565 0 0 31025 0 0 4168.1 0 0 4856.5 0 0 6149.8 0 0 5711 0 0 7418.8 0 0 4705.9 0 0 7791.8 0 0 8209.7 0 0 5582.8 0 0 29384 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 1264300000 1264300000 0 0 NaN 1560 942 594 594 2296 2425 2611;2612 2918;2919 2611 2918 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19215 2611 2918 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19215 2611 2918 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19215 Q13263 596 Q13263 Q13263 Transcription intermediary factor 1-beta TRIM28 sp|Q13263|TIF1B_HUMAN Transcription intermediary factor 1-beta OS=Homo sapiens GN=TRIM28 PE=1 SV=5 0.743441 5.85054 1.05749E-05 116.99 110.76 116.99 1 S LAEGPGAEGPRLASPSGSTSSGLEVVAPEGT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP LAS(0.193)PS(0.743)GS(0.062)T(0.002)SSGLEVVAPEGTSAPGGGPGTLDDSATICR LAS(-5.85)PS(5.85)GS(-10.82)T(-26.89)S(-36.32)S(-41.54)GLEVVAPEGT(-76.3)S(-79.84)APGGGPGT(-87.43)LDDS(-109.73)AT(-113.28)ICR 5 3 0.18545 2652.5 0 0 2267.3 0 0 1839.4 0 0 2352.7 0 0 3587.2 0 0 2725.2 0 0 3579.6 0 0 3475.9 0 0 3179.7 0 0 58051 0 0 2506.9 0 0 2142.4 0 0 1920.3 0 0 2416.5 0 0 3536.6 0 0 2833.7 0 0 3633.2 0 0 5206.7 0 0 3154.3 0 0 54742 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 827470000 827470000 0 0 NaN 1561 942 596 596 2296 2425 2613 2920;2921 2613 2920 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19407 2613 2920 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19407 2613 2920 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19407 Q13263 612 Q13263 Q13263 Transcription intermediary factor 1-beta TRIM28 sp|Q13263|TIF1B_HUMAN Transcription intermediary factor 1-beta OS=Homo sapiens GN=TRIM28 PE=1 SV=5 0.486269 0 2.39909E-12 177.1 165.97 177.1 S GSTSSGLEVVAPEGTSAPGGGPGTLDDSATI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LASPSGST(0.001)S(0.001)S(0.001)GLEVVAPEGT(0.486)S(0.486)APGGGPGT(0.025)LDDSATICR LAS(-51.99)PS(-45.84)GS(-33.99)T(-27.52)S(-27.52)S(-27.52)GLEVVAPEGT(0)S(0)APGGGPGT(-12.96)LDDS(-39.35)AT(-47.88)ICR 21 4 -0.18249 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1562 942 612 612 2296 2425 2610 2916 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18994 2610 2916 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18994 2610 2916 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18994 Q13263 697 Q13263 Q13263 Transcription intermediary factor 1-beta TRIM28 sp|Q13263|TIF1B_HUMAN Transcription intermediary factor 1-beta OS=Homo sapiens GN=TRIM28 PE=1 SV=5 1 66.2987 0.022802 66.299 40.472 66.299 1 S LSLDGADSTGVVAKLSPANQRKCERVLLALF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPXXXXXXXXXX LS(1)PANQR LS(66.3)PANQR 2 2 -0.48474 18041 0 0 19360 0 0 20255 0 0 19233 0 0 22135 0 0 17002 0 0 18769 0 0 19389 0 0 20080 0 0 3434.2 0 0 17080 0 0 18288 0 0 20285 0 0 19720 0 0 22306 0 0 17178 0 0 19303 0 0 19460 0 0 19757 0 0 3682.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37310000 37310000 0 0 NaN 1563 942 697 697 2566 2710 2908 3242 2908 3242 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7682 2908 3242 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7682 2908 3242 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7682 Q13263 473 Q13263 Q13263 Transcription intermediary factor 1-beta TRIM28 sp|Q13263|TIF1B_HUMAN Transcription intermediary factor 1-beta OS=Homo sapiens GN=TRIM28 PE=1 SV=5 1 105.385 1.00631E-29 303.79 263.2 303.79 1 S YSSAEPHVSGVKRSRSGEGEVSGLMRKVPRV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX S(1)GEGEVSGLMR S(105.39)GEGEVS(-105.39)GLMR 1 2 -0.98227 114500 0 0 99550 0 0 112410 0 0 103160 0 0 163960 0 0 121760 0 0 189120 0 0 131910 0 0 106300 0 0 35661 0 0 108340 0 0 94062 0 0 113990 0 0 106000 0 0 163620 0 0 121410 0 0 189030 0 0 133000 0 0 108400 0 0 36631 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 610460000 610460000 0 0 NaN 1564 942 473 473 3780;4282 4026;4027;4562;4563 4295;4296;4862;4863 4774;4775;5396;5397 4296 4775 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13814 4296 4775 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13814 4296 4775 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13814 Q13263 50 Q13263 Q13263 Transcription intermediary factor 1-beta TRIM28 sp|Q13263|TIF1B_HUMAN Transcription intermediary factor 1-beta OS=Homo sapiens GN=TRIM28 PE=1 SV=5 0.994403 22.4963 7.48318E-46 328.85 307.32 328.85 1 S APSAAASASASAAASSPAGGGAEALELLEHC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP STAPSAAASASASAAAS(0.006)S(0.994)PAGGGAEALELLEHCGVCR S(-217.18)T(-217.18)APS(-212.21)AAAS(-180.72)AS(-148.46)AS(-101.61)AAAS(-22.5)S(22.5)PAGGGAEALELLEHCGVCR 18 4 -0.045023 15958 0 0 26066 0 0 12615 0 0 31600 0 0 16884 0 0 15478 0 0 21700 0 0 24931 0 0 33842 0 0 111180 0 0 15088 0 0 24655 0 0 12956 0 0 31849 0 0 16962 0 0 16562 0 0 22190 0 0 27992 0 0 32877 0 0 105270 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 1055300000 1055300000 0 0 NaN 1565 942 50 50 4495 4787 5098;5099 5657;5658;5659;5660;5661;5662 5098 5658 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20408 5098 5658 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20408 5098 5658 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20408 Q13263 489 Q13263 Q13263 Transcription intermediary factor 1-beta TRIM28 sp|Q13263|TIF1B_HUMAN Transcription intermediary factor 1-beta OS=Homo sapiens GN=TRIM28 PE=1 SV=5 0.982464 18.9811 0.0123193 68.231 44.505 68.231 1 S GEGEVSGLMRKVPRVSLERLDLDLTADSQPP X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP VS(0.982)LERLDLDLT(0.012)ADS(0.005)QPPVFK VS(18.98)LERLDLDLT(-18.98)ADS(-22.84)QPPVFK 2 3 0.7305 23728 0 0 29003 0 0 25979 0 0 26923 0 0 37595 0 0 27499 0 0 32739 0 0 41539 0 0 27483 0 0 425770 0 0 22461 0 0 27387 0 0 26163 0 0 27780 0 0 37392 0 0 28516 0 0 33414 0 0 53952 0 0 27340 0 0 401870 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 91001000 91001000 0 0 NaN 1566 942 489 489 5251 5597 5967 6631 5967 6631 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23377 5967 6631 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23377 5967 6631 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23377 Q13283 232 Q13283 Q13283 Ras GTPase-activating protein-binding protein 1 G3BP1 sp|Q13283|G3BP1_HUMAN Ras GTPase-activating protein-binding protein 1 OS=Homo sapiens GN=G3BP1 PE=1 SV=1 0.934097 11.5555 3.42333E-41 329.97 287.97 329.97 1 S PVLEETAPEDAQKSSSPAPADIAQTVQEDLR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.001)S(0.065)S(0.934)PAPADIAQTVQEDLR S(-31.82)S(-11.56)S(11.56)PAPADIAQT(-153.55)VQEDLR 3 2 -0.48504 5778 0 0 6575 0 0 6159.9 0 0 7014 0 0 4708.4 0 0 6613.9 0 0 4680.5 0 0 7595 0 0 6916.3 0 0 25462 0 0 5468.9 0 0 6213.7 0 0 6162.9 0 0 7168.5 0 0 4865.5 0 0 6707.5 0 0 4826.9 0 0 8347.6 0 0 6729.5 0 0 24152 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 2611900000 2611900000 0 0 NaN 1567 943 232 232 4438 4729 5033 5582 5033 5582 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20783 5033 5582 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20783 5033 5582 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20783 Q13283 149 Q13283 Q13283 Ras GTPase-activating protein-binding protein 1 G3BP1 sp|Q13283|G3BP1_HUMAN Ras GTPase-activating protein-binding protein 1 OS=Homo sapiens GN=G3BP1 PE=1 SV=1 1 73.213 9.99479E-08 157.26 137.57 144.2 1 S QDEVFGGFVTEPQEESEEEVEEPEERQQTPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPXXXXX YQDEVFGGFVTEPQEES(1)EEEVEEPEER Y(-122.07)QDEVFGGFVT(-73.21)EPQEES(73.21)EEEVEEPEER 17 4 -0.26565 19658 0 0 23195 0 0 17173 0 0 19646 0 0 23550 0 0 19658 0 0 21402 0 0 37512 0 0 20411 0 0 452580 0 0 18592 0 0 21891 0 0 17509 0 0 20389 0 0 23479 0 0 20761 0 0 21861 0 0 50572 0 0 20181 0 0 427030 0 0 11 0 0 11 0 0 12 0 0 11 0 0 11 0 0 11 0 0 11 0 0 12 0 0 11 0 0 12 0 0 3821700000 3821700000 0 0 NaN 1568 943 149 149 5413 5766 6153;6154;6155;6156 6840;6841;6842;6843;6844;6845;6846;6847;6848;6849;6850;6851 6155 6848 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21339 6153 6844 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22097 6153 6844 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22097 Q13303 9 Q13303 Q13303 Voltage-gated potassium channel subunit beta-2 KCNAB2 sp|Q13303|KCAB2_HUMAN Voltage-gated potassium channel subunit beta-2 OS=Homo sapiens GN=KCNAB2 PE=1 SV=2 0.999999 62.1766 7.82815E-16 215.93 182.55 215.93 1 S _______MYPESTTGSPARLSLRQTGSPGMI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPXXXXXXXXXXXX MYPESTTGS(1)PAR MY(-191.09)PES(-92.67)T(-87.36)T(-62.18)GS(62.18)PAR 9 2 1.9959 39290 0 0 13262 0 0 36743 0 0 12452 0 0 30779 0 0 40332 0 0 33688 0 0 28880 0 0 12465 0 0 11651 0 0 37168 0 0 12524 0 0 37077 0 0 13283 0 0 31608 0 0 39061 0 0 33571 0 0 29764 0 0 13200 0 0 11639 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 31010000 31010000 0 0 NaN 1569 944 9 9 2765;2766 2934;2935 3144 3493 3144 3493 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10678 3144 3493 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10678 3144 3493 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10678 Q13303 14 Q13303 Q13303 Voltage-gated potassium channel subunit beta-2 KCNAB2 sp|Q13303|KCAB2_HUMAN Voltage-gated potassium channel subunit beta-2 OS=Homo sapiens GN=KCNAB2 PE=1 SV=2 0.999979 46.7381 4.0883E-05 127.1 93.794 127.1 1 S __MYPESTTGSPARLSLRQTGSPGMIYSTRY X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPXXXXXXXXXXXXX MYPESTTGSPARLS(1)LR MY(-117.04)PES(-80.4)T(-81.07)T(-67.76)GS(-46.74)PARLS(46.74)LR 14 3 0.084266 8154.9 0 0 4912.2 0 0 8179.3 0 0 4725.7 0 0 11118 0 0 9220.1 0 0 11351 0 0 8330 0 0 4934.5 0 0 6451.3 0 0 7716.7 0 0 4639.4 0 0 8271.1 0 0 4935.8 0 0 11106 0 0 9042.1 0 0 11368 0 0 8584.4 0 0 5141 0 0 6267.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12335000 12335000 0 0 NaN 1570 944 14 14 2766 2935 3145 3494 3145 3494 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15438 3145 3494 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15438 3145 3494 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15438 Q13322 104 Q13322 Q13322 Growth factor receptor-bound protein 10 GRB10 sp|Q13322|GRB10_HUMAN Growth factor receptor-bound protein 10 OS=Homo sapiens GN=GRB10 PE=1 SV=2 1 85.511 0.000517538 110.64 36.856 110.64 1 S QPRASGPPRSIQPQVSPRQRVQRSQPVHILA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX SIQPQVS(1)PR S(-85.51)IQPQVS(85.51)PR 7 2 0.45755 18880 0 0 26786 0 0 18573 0 0 24856 0 0 21311 0 0 20473 0 0 20448 0 0 22736 0 0 29051 0 0 7314.8 0 0 17864 0 0 25293 0 0 18752 0 0 25569 0 0 21461 0 0 20759 0 0 21091 0 0 22939 0 0 28299 0 0 7414 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37474000 37474000 0 0 NaN 1571 945 104 104 3858 4111 4387 4878 4387 4878 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9708 4387 4878 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9708 4387 4878 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9708 Q13330 639 Q13330 Q13330 Metastasis-associated protein MTA1 MTA1 sp|Q13330|MTA1_HUMAN Metastasis-associated protein MTA1 OS=Homo sapiens GN=MTA1 PE=1 SV=2 1 62.4075 0.0157143 73.985 42.613 62.408 1 S NGKSYPTKVRLIRGGSLPPVKRRRMNWIDAP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX GGS(1)LPPVKR GGS(62.41)LPPVKR 3 3 0.0091513 16246 0 0 9308.1 0 0 17680 0 0 10023 0 0 15622 0 0 18191 0 0 15419 0 0 15303 0 0 10454 0 0 1794.9 0 0 15379 0 0 8797.1 0 0 17695 0 0 10379 0 0 15967 0 0 17836 0 0 15569 0 0 15516 0 0 10526 0 0 2044.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10686000 10686000 0 0 NaN 1572 946 639 639 1450;1451 1527;1528 1649;1650 1828;1829 1650 1829 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10150 1649 1828 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12924 1650 1829 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10150 Q13330 522 Q13330 Q13330 Metastasis-associated protein MTA1 MTA1 sp|Q13330|MTA1_HUMAN Metastasis-associated protein MTA1 OS=Homo sapiens GN=MTA1 PE=1 SV=2 0.998187 27.4073 3.65411E-07 142.1 99.31 142.1 1 S AIKAECTARLPEASQSPLVLKQAVRKPLEAV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX LPEAS(0.002)QS(0.998)PLVLK LPEAS(-27.41)QS(27.41)PLVLK 7 3 0.0013842 5605.5 0 0 7327.4 0 0 4203.2 0 0 7631.4 0 0 6109.2 0 0 5043.4 0 0 7284.8 0 0 7461.5 0 0 6292.5 0 0 10194 0 0 5298.9 0 0 6923.7 0 0 4338.6 0 0 7775.5 0 0 6102.8 0 0 5220.3 0 0 7331.7 0 0 7697.9 0 0 6250.9 0 0 9771.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17928000 17928000 0 0 NaN 1573 946 522 522 2493 2632 2826 3153 2826 3153 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19429 2826 3153 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19429 2826 3153 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19429 Q13330 576 Q13330 Q13330 Metastasis-associated protein MTA1 MTA1 sp|Q13330|MTA1_HUMAN Metastasis-associated protein MTA1 OS=Homo sapiens GN=MTA1 PE=1 SV=2 0.999861 38.5695 5.01064E-05 127.61 107.48 127.61 1 S SSLTPAKVAPVINNGSPTILGKRSYEQHNGV X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPXXXXXXXXX VAPVINNGS(1)PTILGK VAPVINNGS(38.57)PT(-38.57)ILGK 9 3 0.50457 10042 0 0 8893.2 0 0 11084 0 0 9425 0 0 9103.7 0 0 9554.8 0 0 10151 0 0 10505 0 0 9818.9 0 0 14055 0 0 9506.4 0 0 8404.1 0 0 11078 0 0 9646.9 0 0 9369.8 0 0 9609.8 0 0 10273 0 0 10924 0 0 9702.3 0 0 13478 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 51542000 51542000 0 0 NaN 1574 946 576 576 5049 5383 5735 6374 5735 6374 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19591 5735 6374 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19591 5735 6374 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19591 Q13370 318 Q13370 Q13370 cGMP-inhibited 3',5'-cyclic phosphodiesterase B PDE3B sp|Q13370|PDE3B_HUMAN cGMP-inhibited 3',5'-cyclic phosphodiesterase B OS=Homo sapiens GN=PDE3B PE=1 SV=2 1 65.9041 0.00754292 80.853 43.24 80.853 1 S TAASYYGSCKIFRRPSLPCISREQMILWDWD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX RPS(1)LPCISR RPS(65.9)LPCIS(-65.9)R 3 3 -0.26664 11417 0 0 6523.3 0 0 11926 0 0 7464.6 0 0 7359 0 0 14273 0 0 6573.6 0 0 10637 0 0 7708 0 0 1605.3 0 0 10805 0 0 6167.7 0 0 11922 0 0 7716.3 0 0 7727.5 0 0 13960 0 0 6760.2 0 0 10859 0 0 7557.4 0 0 1757.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26390000 26390000 0 0 NaN 1575 947 318 318 3407 3619 3860 4285 3860 4285 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12421 3860 4285 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12421 3860 4285 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12421 Q13370 295 Q13370 Q13370 cGMP-inhibited 3',5'-cyclic phosphodiesterase B PDE3B sp|Q13370|PDE3B_HUMAN cGMP-inhibited 3',5'-cyclic phosphodiesterase B OS=Homo sapiens GN=PDE3B PE=1 SV=2 0.49944 0 7.27555E-11 182.78 165.5 182.78 S SAAEEKVPVIRPRRRSSCVSLGETAASYYGS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.499)S(0.499)CVS(0.001)LGETAASYYGSCK S(0)S(0)CVS(-26.49)LGET(-94.39)AAS(-141.22)Y(-159.45)Y(-167.19)GS(-178.07)CK 1 3 -2.1529 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1576 947 295 295 4327 4613 4915 5459 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17675 4915 5459 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17675 4915 5459 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17675 Q13370 296 Q13370 Q13370 cGMP-inhibited 3',5'-cyclic phosphodiesterase B PDE3B sp|Q13370|PDE3B_HUMAN cGMP-inhibited 3',5'-cyclic phosphodiesterase B OS=Homo sapiens GN=PDE3B PE=1 SV=2 0.49944 0 7.27555E-11 182.78 165.5 182.78 S AAEEKVPVIRPRRRSSCVSLGETAASYYGSC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.499)S(0.499)CVS(0.001)LGETAASYYGSCK S(0)S(0)CVS(-26.49)LGET(-94.39)AAS(-141.22)Y(-159.45)Y(-167.19)GS(-178.07)CK 2 3 -2.1529 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1577 947 296 296 4327 4613 4915 5459 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17675 4915 5459 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17675 4915 5459 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17675 Q13416 280 Q13416 Q13416 Origin recognition complex subunit 2 ORC2 sp|Q13416|ORC2_HUMAN Origin recognition complex subunit 2 OS=Homo sapiens GN=ORC2 PE=1 SV=2 0.96828 14.8546 0.000946231 100.38 44.976 100.38 1 S AKLDQQTLRNLLSKVSPSFSAELKQLNQQYE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPXXXXXXX VS(0.968)PS(0.032)FSAELK VS(14.85)PS(-14.85)FS(-42.2)AELK 2 2 -0.096045 21553 0 0 21950 0 0 24489 0 0 20597 0 0 40148 0 0 20887 0 0 34603 0 0 25806 0 0 25088 0 0 17235 0 0 20406 0 0 20728 0 0 24671 0 0 21235 0 0 39731 0 0 21017 0 0 35228 0 0 26214 0 0 25158 0 0 16826 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10531000 10531000 0 0 NaN 1578 949 280 280 5266 5612 5982 6646 5982 6646 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18298 5982 6646 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18298 5982 6646 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18298 Q13422 442 Q13422 Q13422 DNA-binding protein Ikaros IKZF1 sp|Q13422|IKZF1_HUMAN DNA-binding protein Ikaros OS=Homo sapiens GN=IKZF1 PE=1 SV=1 0.998678 28.7818 0.000196184 113.86 68.748 113.86 1 S SLKEEHRAYDLLRAASENSQDALRVVSTSGE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX AAS(0.999)ENS(0.001)QDALR AAS(28.78)ENS(-28.78)QDALR 3 2 0.66869 16339 0 0 13060 0 0 17086 0 0 10678 0 0 15761 0 0 16918 0 0 11863 0 0 14903 0 0 12562 0 0 3726.8 0 0 15464 0 0 12324 0 0 17138 0 0 11209 0 0 16018 0 0 16661 0 0 12282 0 0 15139 0 0 12365 0 0 3854.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6714800 6714800 0 0 NaN 1579 950 442 442 66 70 77 89 77 89 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7597 77 89 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7597 77 89 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7597 Q13422 445 Q13422 Q13422 DNA-binding protein Ikaros IKZF1 sp|Q13422|IKZF1_HUMAN DNA-binding protein Ikaros OS=Homo sapiens GN=IKZF1 PE=1 SV=1 0.999998 56.0623 3.77968E-10 191.69 124.7 191.69 1 S EEHRAYDLLRAASENSQDALRVVSTSGEQMK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX AASENS(1)QDALR AAS(-56.06)ENS(56.06)QDALR 6 2 -0.64761 18252 0 0 11781 0 0 18140 0 0 13895 0 0 13136 0 0 18530 0 0 13332 0 0 16174 0 0 12715 0 0 3681.9 0 0 17271 0 0 11141 0 0 18211 0 0 14212 0 0 13628 0 0 18344 0 0 13544 0 0 16426 0 0 12572 0 0 3841.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15289000 15289000 0 0 NaN 1580 950 445 445 66 70 76 88 76 88 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7277 76 88 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7277 76 88 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7277 Q13425 95 Q13425 Q13425 Beta-2-syntrophin SNTB2 sp|Q13425|SNTB2_HUMAN Beta-2-syntrophin OS=Homo sapiens GN=SNTB2 PE=1 SV=1 1 112.023 0.000181822 112.02 79.553 112.02 1 S GDSLPGSPSRGLGPPSPPAPPRGPAGEAGAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY) XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX GLGPPS(1)PPAPPR GLGPPS(112.02)PPAPPR 6 2 0.66598 16248 0 0 16219 0 0 15620 0 0 16969 0 0 16591 0 0 15484 0 0 15943 0 0 16284 0 0 17212 0 0 13879 0 0 15372 0 0 15326 0 0 15775 0 0 17354 0 0 16771 0 0 15623 0 0 16294 0 0 16721 0 0 16929 0 0 13446 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29137000 29137000 0 0 NaN 1581 951 95 95 1498 1576 1701 1882 1701 1882 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13503 1701 1882 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13503 1701 1882 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13503 Q13425 110 Q13425 Q13425 Beta-2-syntrophin SNTB2 sp|Q13425|SNTB2_HUMAN Beta-2-syntrophin OS=Homo sapiens GN=SNTB2 PE=1 SV=1 1 99.9146 0.000809786 99.915 67.181 99.915 1 S SPPAPPRGPAGEAGASPPVRRVRVVKQEAGG Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPXXXXXXXXXX GPAGEAGAS(1)PPVRR GPAGEAGAS(99.91)PPVRR 9 3 0.040223 10087 0 0 10870 0 0 9104.4 0 0 11472 0 0 10811 0 0 9271.8 0 0 12200 0 0 10231 0 0 11889 0 0 1995.2 0 0 9541.2 0 0 10272 0 0 9247.6 0 0 11707 0 0 10890 0 0 9407.6 0 0 12343 0 0 10286 0 0 11744 0 0 2115.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15815000 15815000 0 0 NaN 1582 951 110 110 1537 1619 1748 1941 1748 1941 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7153 1748 1941 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7153 1748 1941 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7153 Q13427 687 Q13427 Q13427 Peptidyl-prolyl cis-trans isomerase G PPIG sp|Q13427|PPIG_HUMAN Peptidyl-prolyl cis-trans isomerase G OS=Homo sapiens GN=PPIG PE=1 SV=2 0.999963 44.3119 0.00151629 112.89 64.934 97.203 1 S NSSNNSREKKADRDQSPFSKIKQSSQDNELK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX ADRDQS(1)PFSK ADRDQS(44.31)PFS(-44.31)K 6 3 -0.79097 314180 0 0 471310 0 0 297140 0 0 455920 0 0 407290 0 0 291490 0 0 422890 0 0 380400 0 0 481830 0 0 13861 0 0 297230 0 0 445140 0 0 301560 0 0 466420 0 0 407090 0 0 300660 0 0 431330 0 0 378550 0 0 472920 0 0 21856 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 1153300000 1153300000 0 0 NaN 1583 952 687 687 116;782;1993 122;830;2108 131;886;2272 145;146;977;2538 131 145 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9987 886 977 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11904 131 145 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9987 Q13427 544 Q13427 Q13427 Peptidyl-prolyl cis-trans isomerase G PPIG sp|Q13427|PPIG_HUMAN Peptidyl-prolyl cis-trans isomerase G OS=Homo sapiens GN=PPIG PE=1 SV=2 0.999997 55.1688 0.0110789 73.928 51.126 73.928 2 S EHDHSKSKEKDRRAQSRSRECDITKGKHSYN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX AQS(1)RS(1)RECDITK AQS(55.17)RS(37.8)RECDIT(-37.8)K 3 3 -0.3255 0 39729 0 0 51110 0 0 43553 0 0 52750 0 0 56267 0 0 43302 0 0 55340 0 0 51953 0 0 53491 0 0 10584 0 0 37609 0 0 48291 0 0 43790 0 0 53910 0 0 56334 0 0 43954 0 0 56325 0 0 52096 0 0 52858 0 0 11169 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 37428000 0 37428000 0 NaN 1584 952 544 544 403 431 466 518;519 466 518 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7750 466 518 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7750 466 518 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7750 Q13427 546 Q13427 Q13427 Peptidyl-prolyl cis-trans isomerase G PPIG sp|Q13427|PPIG_HUMAN Peptidyl-prolyl cis-trans isomerase G OS=Homo sapiens GN=PPIG PE=1 SV=2 1 89.8209 2.64821E-05 138.42 89.983 138.42 1;2 S DHSKSKEKDRRAQSRSRECDITKGKHSYNSR X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX S(1)RECDITK S(89.82)RECDIT(-89.82)K 1 3 0.39057 28049 39729 0 32231 51110 0 27483 43553 0 34355 52750 0 34169 56267 0 26546 43302 0 0 55340 0 29273 51953 0 35865 53491 0 2601.3 10584 0 26540 37609 0 30459 48291 0 27724 43790 0 35020 53910 0 33831 56334 0 26996 43954 0 0 56325 0 29336 52096 0 33867 52858 0 3126.9 11169 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 0 2 0 1 2 0 1 2 0 1 2 0 84938000 47510000 37428000 0 NaN 1585 952 546 546 403;4261 431;4540 466;4839 518;519;5370 4839 5370 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8187 4839 5370 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8187 4839 5370 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8187 Q13427 397 Q13427 Q13427 Peptidyl-prolyl cis-trans isomerase G PPIG sp|Q13427|PPIG_HUMAN Peptidyl-prolyl cis-trans isomerase G OS=Homo sapiens GN=PPIG PE=1 SV=2 1 83.8618 0.0101204 83.862 51.542 83.862 1 S KGDKSELNEIKENQRSPVRVKERKITDHRNV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX ENQRS(1)PVR ENQRS(83.86)PVR 5 2 -1.0036 19472 0 0 27216 0 0 19250 0 0 27353 0 0 25118 0 0 19868 0 0 25305 0 0 25051 0 0 28246 0 0 27241 0 0 18425 0 0 25711 0 0 19468 0 0 27957 0 0 25148 0 0 20365 0 0 25830 0 0 25748 0 0 27746 0 0 26231 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 194410000 194410000 0 0 NaN 1586 952 397 397 1077;3690 1135;3925 1223;4185 1345;4651 1223 1345 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4789 1223 1345 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4789 1223 1345 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4789 Q13427 356 Q13427 Q13427 Peptidyl-prolyl cis-trans isomerase G PPIG sp|Q13427|PPIG_HUMAN Peptidyl-prolyl cis-trans isomerase G OS=Homo sapiens GN=PPIG PE=1 SV=2 1 55.8154 0.0509466 55.815 41.658 55.815 2 S YRTPSRSRSRDRFRRSETPPHWRQEMQRAQR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX FRRS(1)ET(1)PPHWR FRRS(55.82)ET(55.82)PPHWR 4 3 -0.0036543 0 11102 0 0 14738 0 0 10219 0 0 14380 0 0 13124 0 0 11484 0 0 11806 0 0 12221 0 0 12599 0 0 5297.3 0 0 10502 0 0 13920 0 0 10373 0 0 14741 0 0 13129 0 0 11659 0 0 12102 0 0 12389 0 0 12397 0 0 5270.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 37748000 0 37748000 0 NaN 1587 952 356 356 1314;3726 1385;3967 1491 1653 1491 1653 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11203 1491 1653 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11203 1491 1653 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11203 Q13427 514 Q13427 Q13427 Peptidyl-prolyl cis-trans isomerase G PPIG sp|Q13427|PPIG_HUMAN Peptidyl-prolyl cis-trans isomerase G OS=Homo sapiens GN=PPIG PE=1 SV=2 1 48.7409 0.0518252 48.741 18.41 48.741 1 S EKEKQSDSKGKDQERSRSKEKSKQLESKSNE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPXXXXXXXXXXXXXX GKDQERS(1)R GKDQERS(48.74)R 7 3 -0.67687 1811.1 0 0 2399.1 0 0 2181.6 0 0 2790.6 0 0 2743.9 0 0 1402.5 0 0 2446.7 0 0 2668.8 0 0 2643.5 0 0 4730.8 0 0 1715.1 0 0 2268.6 0 0 2181.8 0 0 2819.1 0 0 2747.3 0 0 1492.5 0 0 2510.2 0 0 2770.4 0 0 2600 0 0 4516.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5009000 5009000 0 0 NaN 1588 952 514 514 1483 1561 1686 1866 1686 1866 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4751 1686 1866 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4751 1686 1866 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4751 Q13427 716 Q13427 Q13427 Peptidyl-prolyl cis-trans isomerase G PPIG sp|Q13427|PPIG_HUMAN Peptidyl-prolyl cis-trans isomerase G OS=Homo sapiens GN=PPIG PE=1 SV=2 0.809781 6.29114 0.00224846 95.094 64.763 95.094 1 S LKSSMLKNKEDEKIRSSVEKENQKSKGQEND X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(0.81)S(0.19)VEKENQK S(6.29)S(-6.29)VEKENQK 1 3 -0.040441 31618 0 0 45717 0 0 36177 0 0 42417 0 0 39546 0 0 41065 0 0 45993 0 0 41869 0 0 51016 0 0 2800.1 0 0 29936 0 0 43169 0 0 36220 0 0 43732 0 0 40029 0 0 41238 0 0 46645 0 0 42051 0 0 50124 0 0 3605.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 51243000 51243000 0 0 NaN 1589 952 716 716 1929;1930;4488 2037;2038;4780 5090 5649 5090 5649 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7591 5090 5649 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7591 5090 5649 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7591 Q13427 717 Q13427 Q13427 Peptidyl-prolyl cis-trans isomerase G PPIG sp|Q13427|PPIG_HUMAN Peptidyl-prolyl cis-trans isomerase G OS=Homo sapiens GN=PPIG PE=1 SV=2 0.99765 26.2795 6.20716E-05 130.64 103.39 103.42 1 S KSSMLKNKEDEKIRSSVEKENQKSKGQENDH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX IRS(0.002)S(0.998)VEK IRS(-26.28)S(26.28)VEK 4 3 0.14472 62774 0 0 78096 0 0 60256 0 0 82410 0 0 68692 0 0 55085 0 0 75762 0 0 69181 0 0 83196 0 0 9997.4 0 0 59391 0 0 73799 0 0 60935 0 0 83914 0 0 69318 0 0 56630 0 0 76983 0 0 69148 0 0 81774 0 0 11015 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 328480000 328480000 0 0 NaN 1590 952 717 717 1929;1930;4488 2037;2038;4780 2198;2199 2458;2459 2198 2458 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8918 2199 2459 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8622 2199 2459 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8622 Q13427 415 Q13427 Q13427 Peptidyl-prolyl cis-trans isomerase G PPIG sp|Q13427|PPIG_HUMAN Peptidyl-prolyl cis-trans isomerase G OS=Homo sapiens GN=PPIG PE=1 SV=2 0.994699 22.7335 0.000633528 108.01 88.221 108.01 1 S RVKERKITDHRNVSESPNRKNEKEKKVKDHK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX NVS(0.005)ES(0.995)PNRK NVS(-22.73)ES(22.73)PNRK 5 2 0.91974 8988.2 0 0 15647 0 0 9180.7 0 0 14921 0 0 10967 0 0 8635.9 0 0 10466 0 0 11438 0 0 16960 0 0 2240.4 0 0 8505.9 0 0 14777 0 0 9254.3 0 0 15264 0 0 11023 0 0 8976.1 0 0 10855 0 0 11432 0 0 16459 0 0 2374.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17212000 17212000 0 0 NaN 1591 952 415 415 2960 3139 3361 3726 3361 3726 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6352 3361 3726 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6352 3361 3726 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6352 Q13428 906 Q13428 Q13428 Treacle protein TCOF1 sp|Q13428|TCOF_HUMAN Treacle protein OS=Homo sapiens GN=TCOF1 PE=1 SV=3 1 138.193 4.77224E-06 138.19 123.22 138.19 1 S GKTHQIRAALAPAKESPRKGAAPTPPGKTGP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX AALAPAKES(1)PR AALAPAKES(138.19)PR 9 2 -0.706 82734 0 0 111870 0 0 70555 0 0 116400 0 0 52075 0 0 70581 0 0 53227 0 0 76200 0 0 118550 0 0 5514.5 0 0 78242 0 0 105710 0 0 71521 0 0 118510 0 0 54015 0 0 72873 0 0 55913 0 0 76382 0 0 114200 0 0 6956.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 82660000 82660000 0 0 NaN 1592 953 906 906 42 45 49 59 49 59 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9865 49 59 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9865 49 59 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9865 Q13428 381 Q13428 Q13428 Treacle protein TCOF1 sp|Q13428|TCOF_HUMAN Treacle protein OS=Homo sapiens GN=TCOF1 PE=1 SV=3 1 76.9721 1.51498E-10 176.9 157.9 157.97 1 S GKTSQVGAASAPAKESPRKGAAPAPPGKTGP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPXXXXXXXXXXXX AASAPAKES(1)PR AAS(-76.97)APAKES(76.97)PR 9 2 3.2791 263750 0 0 442430 0 0 271060 0 0 407280 0 0 216770 0 0 272560 0 0 233310 0 0 305750 0 0 468200 0 0 11007 0 0 249600 0 0 417750 0 0 271890 0 0 418160 0 0 223640 0 0 279650 0 0 243130 0 0 305730 0 0 452010 0 0 17441 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 1820200000 1820200000 0 0 NaN 1593 953 381 381 63;64;4950 67;68;5278 72;73;74;5621 84;85;86;6247 73 85 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6549 5621 6247 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8011 5621 6247 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8011 Q13428 233 Q13428 Q13428 Treacle protein TCOF1 sp|Q13428|TCOF_HUMAN Treacle protein OS=Homo sapiens GN=TCOF1 PE=1 SV=3 0.999979 46.9134 6.19665E-16 220.25 198.17 220.25 1 S VKPAQVKASSVSTKESPARKAAPAPGKVGDV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPXXXXXXXXXXX ASSVSTKES(1)PAR AS(-130.5)S(-94.41)VS(-67.25)T(-46.91)KES(46.91)PAR 9 2 0.26203 38881 0 0 62635 0 0 43968 0 0 55492 0 0 30998 0 0 46060 0 0 30484 0 0 43258 0 0 63400 0 0 4270 0 0 36811 0 0 59128 0 0 43821 0 0 57262 0 0 32246 0 0 46562 0 0 31956 0 0 43628 0 0 61161 0 0 5021.9 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 102350000 102350000 0 0 NaN 1594 953 233 233 510;511 542;543 582;583 649;650 582 649 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6926 582 649 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6926 582 649 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6926 Q13428 1471 Q13428 Q13428 Treacle protein TCOF1 sp|Q13428|TCOF_HUMAN Treacle protein OS=Homo sapiens GN=TCOF1 PE=1 SV=3 0.99903 30.1294 3.20417E-13 226.2 166.15 226.2 1 S EKKKKAKKASTKDSESPSQKKKKKKKKTAEQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX DSES(0.999)PS(0.001)QK DS(-70.63)ES(30.13)PS(-30.13)QK 4 2 -0.024637 86245 0 0 122030 0 0 82527 0 0 121530 0 0 38929 0 0 73646 0 0 45800 0 0 79265 0 0 133460 0 0 11084 0 0 81596 0 0 115270 0 0 82793 0 0 124040 0 0 42259 0 0 76048 0 0 48691 0 0 79625 0 0 127970 0 0 12272 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 168850000 168850000 0 0 NaN 1595 953 1471 1471 804;805 852;853 908;909 1000;1001 908 1000 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6423 908 1000 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6423 908 1000 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6423 Q13428 1378 Q13428 Q13428 Treacle protein TCOF1 sp|Q13428|TCOF_HUMAN Treacle protein OS=Homo sapiens GN=TCOF1 PE=1 SV=3 0.999879 39.1836 5.69558E-33 323.88 278.54 140.8 1 S KKKKLGAGEGGEASVSPEKTSTTSKGKAKRD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPPXXXXXX KLGAGEGGEASVS(1)PEK KLGAGEGGEAS(-39.18)VS(39.18)PEK 13 4 0.031234 56088 0 0 76328 0 0 58415 0 0 81418 0 0 54183 0 0 56535 0 0 61236 0 0 66764 0 0 83955 0 0 51898 0 0 53082 0 0 72133 0 0 58648 0 0 82887 0 0 55356 0 0 58004 0 0 62616 0 0 68136 0 0 81875 0 0 50413 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 199340000 199340000 0 0 NaN 1596 953 1378 1378 2113;2357;2358 2234;2490;2491 2407;2679;2680 2683;2992;2993 2407 2683 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11724 2680 2993 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12170 2680 2993 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12170 Q13428 1350 Q13428 Q13428 Treacle protein TCOF1 sp|Q13428|TCOF_HUMAN Treacle protein OS=Homo sapiens GN=TCOF1 PE=1 SV=3 1 101.009 0.000158374 119.87 98.277 101.01 1 S KESSRKGWESRKRKLSGDQPAARTPRSKKKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX RKLS(1)GDQPAAR RKLS(101.01)GDQPAAR 4 3 0.21527 40832 0 0 60755 0 0 38407 0 0 64990 0 0 40859 0 0 37899 0 0 44793 0 0 46139 0 0 65018 0 0 5267.1 0 0 38628 0 0 57418 0 0 38851 0 0 66036 0 0 41394 0 0 39310 0 0 45961 0 0 46120 0 0 63295 0 0 6027.5 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 759640000 759640000 0 0 NaN 1597 953 1350 1350 2127;3293 2248;3494 2421;3731 2698;4145 3731 4145 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6476 2421 2698 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7822 2421 2698 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7822 Q13428 1228 Q13428 Q13428 Treacle protein TCOF1 sp|Q13428|TCOF_HUMAN Treacle protein OS=Homo sapiens GN=TCOF1 PE=1 SV=3 0.50338 2.22345 2.57567E-06 138.55 93.941 138.55 1 S PANSQASKATPKLDSSPSVSSTLAAKDDPDG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX LDS(0.302)S(0.503)PS(0.195)VSSTLAAK LDS(-2.22)S(2.22)PS(-4.12)VS(-46.92)S(-56.68)T(-60.66)LAAK 4 2 0.6291 13006 0 0 22216 0 0 16981 0 0 22893 0 0 11473 0 0 15505 0 0 10270 0 0 18329 0 0 24561 0 0 42723 0 0 12322 0 0 20991 0 0 16801 0 0 23346 0 0 11964 0 0 15987 0 0 10903 0 0 19563 0 0 23628 0 0 40653 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 52917000 52917000 0 0 NaN 1598 953 1228 1228 2320 2453 2642 2953 2642 2953 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16544 2642 2953 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16544 2642 2953 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16544 Q13428 1257 Q13428 Q13428 Treacle protein TCOF1 sp|Q13428|TCOF_HUMAN Treacle protein OS=Homo sapiens GN=TCOF1 PE=1 SV=3 1 120.329 8.15913E-05 120.33 92.563 120.33 1 S DGKQEAKPQQAAGMLSPKTGGKEAASGTTPQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X XXXPPPPPPPPPPPPPPPXXXXXXXXXXXXX QEAKPQQAAGMLS(1)PK QEAKPQQAAGMLS(120.33)PK 13 3 0.18614 12459 0 0 26674 0 0 15851 0 0 26160 0 0 10954 0 0 14141 0 0 11800 0 0 17703 0 0 28018 0 0 7428.3 0 0 11802 0 0 25195 0 0 15708 0 0 26698 0 0 11432 0 0 14769 0 0 12414 0 0 17843 0 0 26957 0 0 7404.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17000000 17000000 0 0 NaN 1599 953 1257 1257 3009 3190 3413 3785 3413 3785 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13162 3413 3785 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13162 3413 3785 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13162 Q13428 583 Q13428 Q13428 Treacle protein TCOF1 sp|Q13428|TCOF_HUMAN Treacle protein OS=Homo sapiens GN=TCOF1 PE=1 SV=3 0.89983 9.69909 1.10961E-10 192.09 173.73 192.09 1 S QEKSLGNILQAKPTSSPAKGPPQKAGPVAVQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPXXXXXXXXXXXX SLGNILQAKPT(0.004)S(0.096)S(0.9)PAK S(-159.97)LGNILQAKPT(-23.82)S(-9.7)S(9.7)PAK 13 4 0.60584 4902.5 0 0 7272.4 0 0 4123.4 0 0 7578.6 0 0 3615.4 0 0 4599.5 0 0 3299.3 0 0 5231.5 0 0 8443.4 0 0 2275.4 0 0 4636.1 0 0 6871.7 0 0 4190 0 0 7714.9 0 0 3699.3 0 0 4755.5 0 0 3514.4 0 0 5291.6 0 0 8112.9 0 0 2263.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 101290000 101290000 0 0 NaN 1600 953 583 583 3938 4197 4479 4978 4479 4978 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17891 4479 4978 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17891 4479 4978 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17891 Q13428 1111 Q13428 Q13428 Treacle protein TCOF1 sp|Q13428|TCOF_HUMAN Treacle protein OS=Homo sapiens GN=TCOF1 PE=1 SV=3 0.779866 6.33387 1.33013E-07 148.31 124.57 148.31 1 S PSSGVDSAVGTLPATSPQSTSVQAKGTNKLR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPXXXXXX TQPSSGVDSAVGTLPAT(0.181)S(0.78)PQS(0.03)T(0.007)S(0.002)VQAK T(-112.37)QPS(-108.15)S(-103.04)GVDS(-85.35)AVGT(-52.99)LPAT(-6.33)S(6.33)PQS(-14.18)T(-20.36)S(-26.49)VQAK 18 4 0.043132 12099 0 0 15407 0 0 11795 0 0 17200 0 0 12697 0 0 12489 0 0 11536 0 0 15410 0 0 18713 0 0 21494 0 0 11448 0 0 14565 0 0 11903 0 0 17475 0 0 12822 0 0 12806 0 0 11995 0 0 15992 0 0 18160 0 0 20596 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 91454000 91454000 0 0 NaN 1601 953 1111 1111 4878 5203 5542 6160 5542 6160 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15030 5542 6160 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15030 5542 6160 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15030 Q13428 156 Q13428 Q13428 Treacle protein TCOF1 sp|Q13428|TCOF_HUMAN Treacle protein OS=Homo sapiens GN=TCOF1 PE=1 SV=3 0.999896 39.8222 1.36807E-07 163.18 126.2 163.18 1 S HPATGKTVANLLSGKSPRKSAEPSANTTLVS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX TVANLLSGKS(1)PR T(-134.17)VANLLS(-39.82)GKS(39.82)PR 10 3 -0.18861 146680 0 0 177310 0 0 143220 0 0 159340 0 0 61687 0 0 135080 0 0 62998 0 0 129080 0 0 186360 0 0 3478.1 0 0 138780 0 0 167400 0 0 143420 0 0 164310 0 0 67549 0 0 136410 0 0 67442 0 0 129810 0 0 178650 0 0 6262.4 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 554230000 554230000 0 0 NaN 1602 953 156 156 4997;4998 5327;5328 5677;5678 6307;6308 5677 6307 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16800 5677 6307 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16800 5677 6307 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16800 Q13439 87 Q13439 Q13439 Golgin subfamily A member 4 GOLGA4 sp|Q13439|GOGA4_HUMAN Golgin subfamily A member 4 OS=Homo sapiens GN=GOLGA4 PE=1 SV=1 0.393127 1.13082 0.00431531 88.075 38.627 88.075 S VESLFRSPIKESLFRSSSKESLVRTSSRESL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(0.393)S(0.303)S(0.303)KES(0.001)LVR S(1.13)S(-1.13)S(-1.13)KES(-26.59)LVR 1 3 0.75073 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1603 955 87 87 4425 4715 5019 5567 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9621 5019 5567 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9621 5019 5567 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9621 Q13439 41 Q13439 Q13439 Golgin subfamily A member 4 GOLGA4 sp|Q13439|GOGA4_HUMAN Golgin subfamily A member 4 OS=Homo sapiens GN=GOLGA4 PE=1 SV=1 0.860967 7.97242 1.13868E-53 363.3 302.26 363.3 1 S SSNSSTPTRMRSRTSSFTEQLDEGTPNRESG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX TS(0.002)S(0.861)FT(0.137)EQLDEGTPNR T(-37.22)S(-27.46)S(7.97)FT(-7.97)EQLDEGT(-179.55)PNR 3 2 -0.24258 9977.5 0 0 17537 0 0 9972.4 0 0 17519 0 0 12247 0 0 9214.9 0 0 11685 0 0 15174 0 0 19375 0 0 13375 0 0 9441.2 0 0 16566 0 0 10069 0 0 17855 0 0 12294 0 0 9707.1 0 0 12132 0 0 15392 0 0 18791 0 0 12946 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21588000 21588000 0 0 NaN 1604 955 41 41 4958 5286 5629 6256 5629 6256 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14260 5629 6256 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14260 5629 6256 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14260 Q13439 71 Q13439 Q13439 Golgin subfamily A member 4 GOLGA4 sp|Q13439|GOGA4_HUMAN Golgin subfamily A member 4 OS=Homo sapiens GN=GOLGA4 PE=1 SV=1 0.999804 37.0874 4.48759E-09 183.57 112.12 183.57 1 S GDTQSFAQKLQLRVPSVESLFRSPIKESLFR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX VPS(1)VESLFR VPS(37.09)VES(-37.09)LFR 3 2 0.15319 25782 0 0 51151 0 0 27668 0 0 51536 0 0 33091 0 0 26472 0 0 37294 0 0 38163 0 0 51586 0 0 19018 0 0 24403 0 0 48322 0 0 27826 0 0 52489 0 0 33333 0 0 27835 0 0 38151 0 0 38400 0 0 50294 0 0 18791 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 123590000 123590000 0 0 NaN 1605 955 71 71 5215 5559 5923 6581 5923 6581 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23281 5923 6581 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23281 5923 6581 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23281 Q13442 176 Q13442 Q13442 28 kDa heat- and acid-stable phosphoprotein PDAP1 sp|Q13442|HAP28_HUMAN 28 kDa heat- and acid-stable phosphoprotein OS=Homo sapiens GN=PDAP1 PE=1 SV=1 0.955399 13.3084 0.0123324 81.799 39.588 81.799 1 S RKAKDDATLSGKRMQSLSLNK__________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX MQS(0.955)LS(0.045)LNK MQS(13.31)LS(-13.31)LNK 3 2 0.25133 16540 0 0 12697 0 0 15375 0 0 13065 0 0 45109 0 0 16662 0 0 49166 0 0 26597 0 0 13190 0 0 10424 0 0 15646 0 0 11996 0 0 15920 0 0 13450 0 0 44045 0 0 16684 0 0 48867 0 0 26607 0 0 14541 0 0 10431 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28392000 28392000 0 0 NaN 1606 956 176 176 2736 2902 3112 3459 3112 3459 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16512 3112 3459 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16512 3112 3459 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16512 Q13442 178 Q13442 Q13442 28 kDa heat- and acid-stable phosphoprotein PDAP1 sp|Q13442|HAP28_HUMAN 28 kDa heat- and acid-stable phosphoprotein OS=Homo sapiens GN=PDAP1 PE=1 SV=1 0.997891 26.751 0.00517024 94.82 50.51 94.82 1 S AKDDATLSGKRMQSLSLNK____________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX MQS(0.002)LS(0.998)LNK MQS(-26.75)LS(26.75)LNK 5 2 -0.28223 21052 0 0 24715 0 0 20923 0 0 25091 0 0 21496 0 0 24309 0 0 21863 0 0 24846 0 0 26393 0 0 9314.4 0 0 19921 0 0 23350 0 0 21083 0 0 25727 0 0 21790 0 0 24425 0 0 22361 0 0 25182 0 0 25850 0 0 9345.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14547000 14547000 0 0 NaN 1607 956 178 178 2736 2902 3111 3458 3111 3458 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16154 3111 3458 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16154 3111 3458 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16154 Q13459 1122 Q13459 Q13459 Unconventional myosin-IXb MYO9B sp|Q13459|MYO9B_HUMAN Unconventional myosin-IXb OS=Homo sapiens GN=MYO9B PE=1 SV=3 1 91.6364 0.00803965 91.636 40.832 91.636 1 S DRSPLEHSSPEKEAPSPEKTLPPQKTVAAES X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX EAPS(1)PEK EAPS(91.64)PEK 4 2 -1.0451 27874 0 0 22030 0 0 28179 0 0 20082 0 0 17939 0 0 25384 0 0 17620 0 0 23407 0 0 23147 0 0 4092.1 0 0 26377 0 0 20800 0 0 28231 0 0 20824 0 0 18810 0 0 25190 0 0 18102 0 0 23678 0 0 22604 0 0 4394.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16417000 16417000 0 0 NaN 1608 958 1122 1122 882 935 1013 1120 1013 1120 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8143 1013 1120 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8143 1013 1120 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8143 Q13459 1992 Q13459 Q13459 Unconventional myosin-IXb MYO9B sp|Q13459|MYO9B_HUMAN Unconventional myosin-IXb OS=Homo sapiens GN=MYO9B PE=1 SV=3 0.999997 55.7943 3.39698E-08 169.83 139.15 169.83 1 S KEDITYRLPELDPRGSDEENLDSETSASTES X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPPPPPP LPELDPRGS(1)DEENLDSETSASTESLLEER LPELDPRGS(55.79)DEENLDS(-55.79)ET(-81.97)S(-94.76)AS(-98.79)T(-97.92)ES(-108.46)LLEER 9 3 2.0194 1745 0 0 0 0 0 0 0 0 1563.7 0 0 1504.9 0 0 1422.2 0 0 1419.2 0 0 3046.4 0 0 1630 0 0 60241 0 0 1644.6 0 0 0 0 0 0 0 0 1507.9 0 0 1437.3 0 0 1565.6 0 0 1454.5 0 0 4808 0 0 1599.3 0 0 56795 0 0 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 59060000 59060000 0 0 NaN 1609 958 1992 1992 2494 2633 2827 3154 2827 3154 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21099 2827 3154 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21099 2827 3154 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21099 Q13459 1242 Q13459 Q13459 Unconventional myosin-IXb MYO9B sp|Q13459|MYO9B_HUMAN Unconventional myosin-IXb OS=Homo sapiens GN=MYO9B PE=1 SV=3 0.64297 5.42087 0.00747763 89.396 62.122 89.396 1 S VGKVSEETEKTLPSGSPRPGQLERPTSLALD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP T(0.003)LPS(0.185)GS(0.643)PRPGQLERPT(0.067)S(0.1)LALDS(0.001)R T(-22.88)LPS(-5.42)GS(5.42)PRPGQLERPT(-9.8)S(-8.06)LALDS(-26.35)R 6 3 -0.32643 6164.4 0 0 7045.1 0 0 5883.3 0 0 8129.8 0 0 8553.8 0 0 6429.7 0 0 9202.3 0 0 7710.1 0 0 7007.1 0 0 9931.6 0 0 5832 0 0 6661.4 0 0 5974.3 0 0 8253.9 0 0 8529.9 0 0 6555.5 0 0 9275.9 0 0 7983.4 0 0 7007 0 0 9530.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25866000 25866000 0 0 NaN 1610 958 1242 1242 4783 5101 5435 6046 5435 6046 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14887 5435 6046 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14887 5435 6046 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14887 Q13459 1290 Q13459 Q13459 Unconventional myosin-IXb MYO9B sp|Q13459|MYO9B_HUMAN Unconventional myosin-IXb OS=Homo sapiens GN=MYO9B PE=1 SV=3 0.99987 39.995 7.63664E-08 171.29 148.08 171.29 1 S KSKPCGSPRVQEKPDSPGGSTQIQRYLDAER X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPXXXXXX VQEKPDS(1)PGGSTQIQR VQEKPDS(39.99)PGGS(-39.99)T(-45.21)QIQR 7 3 -0.46742 57853 0 0 57958 0 0 58543 0 0 63842 0 0 104690 0 0 65880 0 0 110210 0 0 82162 0 0 76088 0 0 14472 0 0 54746 0 0 54784 0 0 59485 0 0 65224 0 0 103560 0 0 66175 0 0 110980 0 0 82220 0 0 76523 0 0 15529 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 95810000 95810000 0 0 NaN 1611 958 1290 1290 5221 5565 5930 6588;6589 5930 6588 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9232 5930 6588 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9232 5930 6588 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9232 Q13469 856 Q13469 Q13469 Nuclear factor of activated T-cells, cytoplasmic 2 NFATC2 sp|Q13469|NFAC2_HUMAN Nuclear factor of activated T-cells, cytoplasmic 2 OS=Homo sapiens GN=NFATC2 PE=1 SV=2 0.999632 34.3401 1.21239E-16 243.23 207.12 243.23 1 S TTRPGPPPVSQGQRLSPGSYPTVIQQQNATS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP LS(1)PGSYPTVIQQQNATSQR LS(34.34)PGS(-34.34)Y(-90.02)PT(-121.33)VIQQQNAT(-237.98)S(-240.3)QR 2 3 0.17242 10861 0 0 11135 0 0 10077 0 0 10573 0 0 9200.2 0 0 10694 0 0 9560.7 0 0 11307 0 0 12044 0 0 16688 0 0 10275 0 0 10515 0 0 10182 0 0 10893 0 0 9395.6 0 0 10753 0 0 9782.7 0 0 11821 0 0 11778 0 0 15975 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 38312000 38312000 0 0 NaN 1612 959 856 856 2572 2716 2914 3248 2914 3248 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16661 2914 3248 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16661 2914 3248 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16661 Q13469 363 Q13469 Q13469 Nuclear factor of activated T-cells, cytoplasmic 2 NFATC2 sp|Q13469|NFAC2_HUMAN Nuclear factor of activated T-cells, cytoplasmic 2 OS=Homo sapiens GN=NFATC2 PE=1 SV=2 0.998102 27.2079 0.00010233 105.34 87.423 105.34 1 S AVEFLGPCEQGERRNSAPESILLVPPTWPKP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX RNS(0.998)APES(0.002)ILLVPPTWPK RNS(27.21)APES(-27.21)ILLVPPT(-72.42)WPK 3 3 0.011288 6153.8 0 0 9953.2 0 0 6422.6 0 0 12170 0 0 9615.3 0 0 5551.3 0 0 9869.5 0 0 8986.6 0 0 12334 0 0 23001 0 0 5824.1 0 0 9415.1 0 0 6491.3 0 0 12254 0 0 9575 0 0 5946.1 0 0 10102 0 0 9574.2 0 0 12065 0 0 21866 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11650000 11650000 0 0 NaN 1613 959 363 363 3357 3560 3798 4216 3798 4216 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23014 3798 4216 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23014 3798 4216 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23014 Q13469 236 Q13469 Q13469 Nuclear factor of activated T-cells, cytoplasmic 2 NFATC2 sp|Q13469|NFAC2_HUMAN Nuclear factor of activated T-cells, cytoplasmic 2 OS=Homo sapiens GN=NFATC2 PE=1 SV=2 0.991897 20.946 0.0112137 70.538 59.483 70.538 1 S SPRTSLAEDSCLGRHSPVPRPASRSSSPGAK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPXXXXXXXXXXX TSLAEDS(0.008)CLGRHS(0.992)PVPR T(-44.62)S(-40.35)LAEDS(-20.95)CLGRHS(20.95)PVPR 13 3 -3.5862 21556 0 0 31805 0 0 21390 0 0 30821 0 0 19263 0 0 27612 0 0 18979 0 0 26714 0 0 35528 0 0 7625.6 0 0 20397 0 0 30040 0 0 21522 0 0 31655 0 0 19685 0 0 27823 0 0 19785 0 0 27060 0 0 34353 0 0 7798.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23899000 23899000 0 0 NaN 1614 959 236 236 4920 5245 5588 6210 5588 6210 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10733 5588 6210 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10733 5588 6210 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10733 Q13469 326 Q13469 Q13469 Nuclear factor of activated T-cells, cytoplasmic 2 NFATC2 sp|Q13469|NFAC2_HUMAN Nuclear factor of activated T-cells, cytoplasmic 2 OS=Homo sapiens GN=NFATC2 PE=1 SV=2 0.498858 0 0.000143636 120.63 89.399 120.63 S ATDSPCGIPPKMWKTSPDPSPVSAAPSKAGL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T(0.499)S(0.499)PDPS(0.002)PVSAAPSK T(0)S(0)PDPS(-23.39)PVS(-71.33)AAPS(-115.09)K 2 3 1.3731 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1615 959 326 326 4928 5253 5596 6219 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11478 5596 6219 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11478 5596 6219 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11478 Q13469 217 Q13469 Q13469 Nuclear factor of activated T-cells, cytoplasmic 2 NFATC2 sp|Q13469|NFAC2_HUMAN Nuclear factor of activated T-cells, cytoplasmic 2 OS=Homo sapiens GN=NFATC2 PE=1 SV=2 0.499918 0 0.0157814 81.263 51.078 81.263 1 S CPQFQNIPAHYSPRTSPIMSPRTSLAEDSCL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T(0.5)S(0.5)PIMSPR T(0)S(0)PIMS(-34.82)PR 2 2 -0.92149 12774 0 0 23247 0 0 12885 0 0 23555 0 0 14115 0 0 14056 0 0 14839 0 0 17713 0 0 25323 0 0 5259.5 0 0 12088 0 0 21962 0 0 12984 0 0 24014 0 0 14271 0 0 14569 0 0 15357 0 0 17785 0 0 24542 0 0 5362.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12965000 12965000 0 0 NaN 1616 959 217 217 4935 5260 5603 6227 5603 6227 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10825 5603 6227 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10825 5603 6227 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10825 Q13501 272 Q13501 Q13501 Sequestosome-1 SQSTM1 sp|Q13501|SQSTM_HUMAN Sequestosome-1 OS=Homo sapiens GN=SQSTM1 PE=1 SV=1 0.785558 5.63953 4.4169E-07 157.37 121.61 157.37 1 S IDVEHGGKRSRLTPVSPESSSTEEKSSSQPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPXXXXXX LT(0.214)PVS(0.786)PESSSTEEK LT(-5.64)PVS(5.64)PES(-42.83)S(-65.44)S(-79.14)T(-95.55)EEK 5 3 -0.048453 13832 0 0 13624 0 0 13833 0 0 14399 0 0 12821 0 0 13313 0 0 11720 0 0 13614 0 0 16447 0 0 6696.2 0 0 13088 0 0 12875 0 0 13914 0 0 14720 0 0 13059 0 0 13410 0 0 12112 0 0 13846 0 0 16028 0 0 6620.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 90297000 90297000 0 0 NaN 1617 960 272 272 2633;4266 2780;4545 2981 3318 2981 3318 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13870 2981 3318 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13870 2981 3318 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13870 Q13506 395 Q13506 Q13506 NGFI-A-binding protein 1 NAB1 sp|Q13506|NAB1_HUMAN NGFI-A-binding protein 1 OS=Homo sapiens GN=NAB1 PE=1 SV=2 0.999991 50.6784 0.0239657 65.348 31.426 65.348 1 S NQAGYERLQHAERRLSAGLYRQSSEEHSPNG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX RLS(1)AGLYR RLS(50.68)AGLY(-50.68)R 3 2 0.96835 12910 0 0 13806 0 0 13617 0 0 13390 0 0 12212 0 0 14311 0 0 12502 0 0 13916 0 0 13112 0 0 6320.2 0 0 12219 0 0 13040 0 0 13655 0 0 13788 0 0 12480 0 0 14310 0 0 12729 0 0 14164 0 0 12912 0 0 6273.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10861000 10861000 0 0 NaN 1618 962 395 395 3317 3519 3756 4172 3756 4172 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11987 3756 4172 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11987 3756 4172 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11987 Q13523 257 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog PRPF4B sp|Q13523|PRP4B_HUMAN Serine/threonine-protein kinase PRP4 homolog OS=Homo sapiens GN=PRPF4B PE=1 SV=3 0.999707 35.3355 4.35096E-05 132.97 89.153 132.97 1 S PTLRRRSQEKIGKARSPTDDKVKIEDKSKSK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX ARS(1)PTDDKVK ARS(35.34)PT(-35.34)DDKVK 3 4 -0.71477 216210 0 0 217670 0 0 221910 0 0 217350 0 0 210750 0 0 218200 0 0 227380 0 0 218650 0 0 222160 0 0 7807.2 0 0 204610 0 0 205620 0 0 223020 0 0 223200 0 0 214750 0 0 218690 0 0 230510 0 0 219540 0 0 219420 0 0 12412 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 484560000 484560000 0 0 NaN 1619 963 257 257 426;427 455;456 490;491 546;547 491 547 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7650 491 547 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7650 491 547 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7650 Q13523 431 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog PRPF4B sp|Q13523|PRP4B_HUMAN Serine/threonine-protein kinase PRP4 homolog OS=Homo sapiens GN=PRPF4B PE=1 SV=3 0.999135 30.1039 0.00218885 97.183 71.841 97.183 1;2 S PRDDILSRRERSKDASPINRWSPTRRRSRSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPXXXXXX DAS(0.999)PINRWS(0.114)PT(0.887)R DAS(30.1)PINRWS(-8.94)PT(8.94)R 3 2 -1.5955 14570 16349 0 16250 19463 0 12601 17930 0 15934 20772 0 15904 15495 0 14590 17274 0 13283 15778 0 15924 17508 0 16924 20746 0 1939.5 11401 0 13779 15477 0 15349 18393 0 12838 17934 0 16359 21192 0 15911 15877 0 14704 17495 0 13746 16183 0 15979 17896 0 16545 20259 0 2194.8 11141 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 51667000 7854000 43813000 0 NaN 1620 963 431 431 644;3877;3878 686;4131;4132 731;4408 811;4902 731 811 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12790 731 811 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12790 731 811 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12790 Q13523 437 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog PRPF4B sp|Q13523|PRP4B_HUMAN Serine/threonine-protein kinase PRP4 homolog OS=Homo sapiens GN=PRPF4B PE=1 SV=3 0.652795 2.9241 0.00427785 91.964 77.639 91.964 2 S SRRERSKDASPINRWSPTRRRSRSPIRRRSR X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPXXXXXXXXXXXX S(0.726)KDAS(0.274)PINRWS(0.653)PT(0.347)R S(4.47)KDAS(-4.47)PINRWS(2.92)PT(-2.92)R 11 3 -0.043571 0 35845 0 0 57301 0 0 41337 0 0 59792 0 0 42233 0 0 34906 0 0 45520 0 0 47693 0 0 65188 0 0 11838 0 0 33939 0 0 54145 0 0 41325 0 0 60841 0 0 42870 0 0 36281 0 0 46716 0 0 47701 0 0 63487 0 0 12251 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 73562000 0 73562000 0 NaN 1621 963 437 437 644;3878 686;4132 4409 4903 4409 4903 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11870 4409 4903 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11870 4409 4903 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11870 Q13523 277 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog PRPF4B sp|Q13523|PRP4B_HUMAN Serine/threonine-protein kinase PRP4 homolog OS=Homo sapiens GN=PRPF4B PE=1 SV=3 0.999996 53.9782 3.01709E-05 136.39 98.509 136.39 1 S KVKIEDKSKSKDRKKSPIINESRSRDRGKKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX KKS(1)PIINESR KKS(53.98)PIINES(-53.98)R 3 3 0.3497 60552 0 0 55772 0 0 58417 0 0 53612 0 0 55179 0 0 53432 0 0 60387 0 0 57518 0 0 58343 0 0 5503 0 0 57289 0 0 52673 0 0 58915 0 0 55176 0 0 56259 0 0 53627 0 0 61163 0 0 57702 0 0 57654 0 0 6512.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 330520000 330520000 0 0 NaN 1622 963 277 277 2106 2227 2400 2676 2400 2676 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9378 2400 2676 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9378 2400 2676 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9378 Q13523 239 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog PRPF4B sp|Q13523|PRP4B_HUMAN Serine/threonine-protein kinase PRP4 homolog OS=Homo sapiens GN=PRPF4B PE=1 SV=3 0.97862 14.805 0.0127877 72.152 51.489 72.152 2 S KSPSKRSKSQDQARKSKSPTLRRRSQEKIGK X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPXXXXXXXXX KS(0.979)KS(0.668)PT(0.354)LR KS(14.8)KS(2.89)PT(-2.89)LR 2 3 -0.14524 0 50149 0 0 51155 0 0 49508 0 0 48222 0 0 57305 0 0 45267 0 0 56050 0 0 55631 0 0 53502 0 0 3202 0 0 47452 0 0 48308 0 0 49982 0 0 49644 0 0 57672 0 0 45642 0 0 57044 0 0 55497 0 0 52899 0 0 4302.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 154120000 0 154120000 0 NaN 1623 963 239 239 2213 2339 2520 2813 2520 2813 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8921 2520 2813 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8921 2520 2813 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8921 Q13523 241 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog PRPF4B sp|Q13523|PRP4B_HUMAN Serine/threonine-protein kinase PRP4 homolog OS=Homo sapiens GN=PRPF4B PE=1 SV=3 0.667794 2.89104 0.0127877 72.152 51.489 72.152 2 S PSKRSKSQDQARKSKSPTLRRRSQEKIGKAR X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX KS(0.979)KS(0.668)PT(0.354)LR KS(14.8)KS(2.89)PT(-2.89)LR 4 3 -0.14524 0 50149 0 0 51155 0 0 49508 0 0 48222 0 0 57305 0 0 45267 0 0 56050 0 0 55631 0 0 53502 0 0 3202 0 0 47452 0 0 48308 0 0 49982 0 0 49644 0 0 57672 0 0 45642 0 0 57044 0 0 55497 0 0 52899 0 0 4302.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 154120000 0 154120000 0 NaN 1624 963 241 241 2213 2339 2520 2813 2520 2813 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8921 2520 2813 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8921 2520 2813 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8921 Q13523 349 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog PRPF4B sp|Q13523|PRP4B_HUMAN Serine/threonine-protein kinase PRP4 homolog OS=Homo sapiens GN=PRPF4B PE=1 SV=3 1 72.0417 0.018711 72.042 30.615 72.042 1 S SSGKENRSPSRRPGRSPKRRSLSPKPRDKSR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX RPGRS(1)PK RPGRS(72.04)PK 5 3 -0.58352 49247 0 0 69479 0 0 47642 0 0 67819 0 0 67731 0 0 44716 0 0 71779 0 0 65147 0 0 70272 0 0 25834 0 0 46594 0 0 65625 0 0 48319 0 0 69365 0 0 67603 0 0 46157 0 0 72829 0 0 65334 0 0 69402 0 0 25833 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 144180000 144180000 0 0 NaN 1625 963 349 349 3386 3595 3835 4258 3835 4258 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5136 3835 4258 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5136 3835 4258 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5136 Q13523 427 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog PRPF4B sp|Q13523|PRP4B_HUMAN Serine/threonine-protein kinase PRP4 homolog OS=Homo sapiens GN=PRPF4B PE=1 SV=3 0.726168 4.46788 0.00427785 91.964 77.639 91.964 2 S PRTRPRDDILSRRERSKDASPINRWSPTRRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPXX S(0.726)KDAS(0.274)PINRWS(0.653)PT(0.347)R S(4.47)KDAS(-4.47)PINRWS(2.92)PT(-2.92)R 1 3 -0.043571 0 35845 0 0 57301 0 0 41337 0 0 59792 0 0 42233 0 0 34906 0 0 45520 0 0 47693 0 0 65188 0 0 11838 0 0 33939 0 0 54145 0 0 41325 0 0 60841 0 0 42870 0 0 36281 0 0 46716 0 0 47701 0 0 63487 0 0 12251 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 73562000 0 73562000 0 NaN 1626 963 427 427 3877;3878 4131;4132 4409 4903 4409 4903 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11870 4409 4903 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11870 4409 4903 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11870 Q13523 232 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog PRPF4B sp|Q13523|PRP4B_HUMAN Serine/threonine-protein kinase PRP4 homolog OS=Homo sapiens GN=PRPF4B PE=1 SV=3 0.980807 17.0844 0.0122928 79.492 53.449 79.492 1 S SKERKKSKSPSKRSKSQDQARKSKSPTLRRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX S(0.019)KS(0.981)QDQAR S(-17.08)KS(17.08)QDQAR 3 2 0.31653 21713 0 0 21107 0 0 19839 0 0 17928 0 0 17387 0 0 21187 0 0 17705 0 0 18018 0 0 21322 0 0 3795.3 0 0 20539 0 0 19921 0 0 20055 0 0 18654 0 0 17797 0 0 21058 0 0 18106 0 0 18311 0 0 20885 0 0 3990.7 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 43882000 43882000 0 0 NaN 1627 963 232 232 3912;3913 4170;4171 4451;4452 4949;4950 4451 4949 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5239 4451 4949 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5239 4451 4949 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5239 Q13523 354 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog PRPF4B sp|Q13523|PRP4B_HUMAN Serine/threonine-protein kinase PRP4 homolog OS=Homo sapiens GN=PRPF4B PE=1 SV=3 1 79.1482 0.0103891 79.148 42.724 79.148 2 S NRSPSRRPGRSPKRRSLSPKPRDKSRRSRSP X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX S(1)LS(1)PKPR S(79.15)LS(79.15)PKPR 1 3 -0.097069 0 37918 0 0 38689 0 0 39925 0 0 36949 0 0 37628 0 0 42108 0 0 41062 0 0 40788 0 0 40921 0 0 10708 0 0 35887 0 0 36539 0 0 40066 0 0 38128 0 0 38369 0 0 41980 0 0 41628 0 0 41287 0 0 40383 0 0 11026 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 59083000 0 59083000 0 NaN 1628 963 354 354 3995 4260 4547;4548 5055;5056 4548 5056 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9631 4548 5056 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9631 4548 5056 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9631 Q13523 356 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog PRPF4B sp|Q13523|PRP4B_HUMAN Serine/threonine-protein kinase PRP4 homolog OS=Homo sapiens GN=PRPF4B PE=1 SV=3 1 79.1482 0.0103891 79.148 42.724 79.148 2 S SPSRRPGRSPKRRSLSPKPRDKSRRSRSPLL X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX S(1)LS(1)PKPR S(79.15)LS(79.15)PKPR 3 3 -0.097069 0 37918 0 0 38689 0 0 39925 0 0 36949 0 0 37628 0 0 42108 0 0 41062 0 0 40788 0 0 40921 0 0 10708 0 0 35887 0 0 36539 0 0 40066 0 0 38128 0 0 38369 0 0 41980 0 0 41628 0 0 41287 0 0 40383 0 0 11026 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 59083000 0 59083000 0 NaN 1629 963 356 356 3995 4260 4547;4548 5055;5056 4548 5056 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9631 4548 5056 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9631 4548 5056 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9631 Q13523 366 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog PRPF4B sp|Q13523|PRP4B_HUMAN Serine/threonine-protein kinase PRP4 homolog OS=Homo sapiens GN=PRPF4B PE=1 SV=3 1 53.3665 0.0360338 53.367 32.438 53.367 2 S KRRSLSPKPRDKSRRSRSPLLNDRRSKQSKS X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(1)RS(1)PLLNDR S(53.37)RS(53.37)PLLNDR 1 2 0.61663 0 30682 0 0 28114 0 0 26152 0 0 22749 0 0 23257 0 0 28031 0 0 25801 0 0 27507 0 0 26291 0 0 6697.2 0 0 29016 0 0 26528 0 0 26563 0 0 23770 0 0 23808 0 0 27867 0 0 26154 0 0 27813 0 0 25920 0 0 6942.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 23748000 0 23748000 0 NaN 1630 963 366 366 4294 4578 4878 5415 4878 5415 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9081 4878 5415 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9081 4878 5415 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9081 Q13523 368 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog PRPF4B sp|Q13523|PRP4B_HUMAN Serine/threonine-protein kinase PRP4 homolog OS=Homo sapiens GN=PRPF4B PE=1 SV=3 1 53.3665 0.0360338 53.367 32.438 53.367 2 S RSLSPKPRDKSRRSRSPLLNDRRSKQSKSPS X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX S(1)RS(1)PLLNDR S(53.37)RS(53.37)PLLNDR 3 2 0.61663 0 30682 0 0 28114 0 0 26152 0 0 22749 0 0 23257 0 0 28031 0 0 25801 0 0 27507 0 0 26291 0 0 6697.2 0 0 29016 0 0 26528 0 0 26563 0 0 23770 0 0 23808 0 0 27867 0 0 26154 0 0 27813 0 0 25920 0 0 6942.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 23748000 0 23748000 0 NaN 1631 963 368 368 4294 4578 4878 5415 4878 5415 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9081 4878 5415 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9081 4878 5415 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9081 Q13523 294 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog PRPF4B sp|Q13523|PRP4B_HUMAN Serine/threonine-protein kinase PRP4 homolog OS=Homo sapiens GN=PRPF4B PE=1 SV=3 0.822479 6.65876 0.00717652 82.171 42.992 72.006 1 S IINESRSRDRGKKSRSPVDLRGKSKDRRSRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX S(0.178)RS(0.822)PVDLR S(-6.66)RS(6.66)PVDLR 3 2 1.698 12444 0 0 12142 0 0 12754 0 0 12356 0 0 12895 0 0 12563 0 0 14026 0 0 13178 0 0 12652 0 0 1824.3 0 0 11776 0 0 11471 0 0 12829 0 0 12677 0 0 13092 0 0 12595 0 0 14185 0 0 13249 0 0 12542 0 0 2022.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12516000 12516000 0 0 NaN 1632 963 294 294 4302 4587 4887;4888 5428;5429 4888 5429 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7595 4887 5428 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7568 4887 5428 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7568 Q13541 65 Q13541 Q13541 Eukaryotic translation initiation factor 4E-binding protein 1 EIF4EBP1 sp|Q13541|4EBP1_HUMAN Eukaryotic translation initiation factor 4E-binding protein 1 OS=Homo sapiens GN=EIF4EBP1 PE=1 SV=3 0.999981 46.9973 9.84724E-05 114.29 85.711 102.45 1;2 S TRIIYDRKFLMECRNSPVTKTPPRDLPTIPG X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPXXXXXXX FLMECRNS(1)PVT(0.071)KT(0.929)PPR FLMECRNS(47)PVT(-11.17)KT(11.17)PPR 8 4 -0.11239 60232 7000.3 0 57763 6844.8 0 61526 7314.5 0 54915 8058.9 0 72571 11503 0 61196 6366.6 0 86366 13311 0 70025 8093.1 0 57810 8169.5 0 20189 4195.3 0 57000 6625.3 0 54550 6472.9 0 62040 7401.9 0 56660 8173.4 0 73161 11447 0 61208 6486.7 0 86469 13322 0 70506 8177.5 0 58252 8279 0 20631 4137.7 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 182990000 161220000 21767000 0 NaN 1633 964 65 65 1289;1290;2932 1358;1359;1360;3108 1461;1462;1463 1621;1622;1623 1463 1623 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16125 1462 1622 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16543 1462 1622 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16543 Q13541 101 Q13541 Q13541 Eukaryotic translation initiation factor 4E-binding protein 1 EIF4EBP1 sp|Q13541|4EBP1_HUMAN Eukaryotic translation initiation factor 4E-binding protein 1 OS=Homo sapiens GN=EIF4EBP1 PE=1 SV=3 1 93.4769 0.00780949 93.477 58.12 93.477 1 S SDEPPMEASQSHLRNSPEDKRAGGEESQFEM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPXXXXXXXXXX NS(1)PEDKR NS(93.48)PEDKR 2 2 -0.57344 16170 0 0 9436.3 0 0 15108 0 0 9984.9 0 0 8909.5 0 0 15487 0 0 7513.7 0 0 11941 0 0 10945 0 0 6086.3 0 0 15297 0 0 8917.2 0 0 15196 0 0 10307 0 0 9390.9 0 0 15245 0 0 7809.3 0 0 12298 0 0 10654 0 0 6007.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20060000 20060000 0 0 NaN 1634 964 101 101 2922 3098 3318 3678 3318 3678 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5586 3318 3678 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5586 3318 3678 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5586 Q13541 44 Q13541 Q13541 Eukaryotic translation initiation factor 4E-binding protein 1 EIF4EBP1 sp|Q13541|4EBP1_HUMAN Eukaryotic translation initiation factor 4E-binding protein 1 OS=Homo sapiens GN=EIF4EBP1 PE=1 SV=3 0.35245 1.06417 4.32003E-05 114.76 101.35 114.76 S LPPGDYSTTPGGTLFSTTPGGTRIIYDRKFL X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPXXXXXXXX RVVLGDGVQLPPGDYSTTPGGTLFS(0.352)T(0.276)T(0.276)PGGT(0.096)R RVVLGDGVQLPPGDY(-84.04)S(-61.02)T(-52.74)T(-52.74)PGGT(-31.13)LFS(1.06)T(-1.06)T(-1.06)PGGT(-5.67)R 25 4 0.3243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1635 964 44 44 3563;5307 3783;3784;5654;5655 4033 4480 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21023 4033 4480 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21023 4033 4480 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21023 Q13542 44 Q13542 Q13542 Eukaryotic translation initiation factor 4E-binding protein 2 EIF4EBP2 sp|Q13542|4EBP2_HUMAN Eukaryotic translation initiation factor 4E-binding protein 2 OS=Homo sapiens GN=EIF4EBP2 PE=1 SV=1 0.414172 1.532 1.36414E-07 141.16 125.55 141.16 S QLPHDYCTTPGGTLFSTTPGGTRIIYDRKFL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPXXXXXXXX TVAISDAAQLPHDYCT(0.003)T(0.041)PGGT(0.02)LFS(0.414)T(0.291)T(0.206)PGGT(0.025)R T(-109.67)VAIS(-94.39)DAAQLPHDY(-66.76)CT(-22.17)T(-10.03)PGGT(-13.05)LFS(1.53)T(-1.53)T(-3.04)PGGT(-12.18)R 24 3 0.47231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1636 965 44 44 4996 5325;5326 5676 6306 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20088 5676 6306 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20088 5676 6306 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20088 Q13546 320 Q13546 Q13546 Receptor-interacting serine/threonine-protein kinase 1 RIPK1 sp|Q13546|RIPK1_HUMAN Receptor-interacting serine/threonine-protein kinase 1 OS=Homo sapiens GN=RIPK1 PE=1 SV=3 0.999991 52.4947 6.39422E-05 130.27 108.97 130.27 1 S KKEYSNENAVVKRMQSLQLDCVAVPSSRSNS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX MQS(1)LQLDCVAVPSSR MQS(52.49)LQLDCVAVPS(-54.51)S(-52.49)R 3 2 -0.61909 4452.7 0 0 5511.9 0 0 6471.3 0 0 5342.9 0 0 8087.4 0 0 5164.8 0 0 8337.7 0 0 7163.6 0 0 5632.9 0 0 24409 0 0 4220.9 0 0 5205.9 0 0 6420.5 0 0 5493.4 0 0 8112.7 0 0 5255.9 0 0 8401 0 0 7843.6 0 0 5672.7 0 0 23149 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11698000 11698000 0 0 NaN 1637 966 320 320 2735 2901 3110 3457 3110 3457 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18801 3110 3457 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18801 3110 3457 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18801 Q13573 224 Q13573 Q13573 SNW domain-containing protein 1 SNW1 sp|Q13573|SNW1_HUMAN SNW domain-containing protein 1 OS=Homo sapiens GN=SNW1 PE=1 SV=1 1 119.445 5.42156E-06 138 125.98 138 1;2 S PPRFKINKKIPRGPPSPPAPVMHSPSRKMTV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Oxidation (M);X;Phospho (STY);X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPXXX GPPS(1)PPAPVMHS(0.638)PS(0.362)R GPPS(119.44)PPAPVMHS(2.45)PS(-2.45)R 4 3 -0.45501 30031 82211 0 20060 89154 0 27775 77870 0 23222 88040 0 18851 90365 0 32691 89740 0 19221 92200 0 25554 98819 0 24509 85129 0 5918.8 22826 0 28409 77776 0 18968 84214 0 27989 78817 0 23803 90492 0 19667 90984 0 32267 90032 0 19692 93570 0 26087 99459 0 23958 84296 0 6164.6 23781 0 1 4 0 1 4 0 1 4 0 1 4 0 1 4 0 1 4 0 1 4 0 1 4 0 1 4 0 1 4 0 285320000 46782000 238540000 0 NaN 1638 967 224 224 1555;1556 1637;1638;1639;1640 1770;1771;1772;1773 1967;1968;1969;1970;1971 1772 1970 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11546 1772 1970 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11546 1772 1970 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11546 Q13573 232 Q13573 Q13573 SNW domain-containing protein 1 SNW1 sp|Q13573|SNW1_HUMAN SNW domain-containing protein 1 OS=Homo sapiens GN=SNW1 PE=1 SV=1 0.734855 4.42718 5.42156E-06 138 125.98 87.892 2 S KIPRGPPSPPAPVMHSPSRKMTVKEQQEWKI X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Oxidation (M);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPXXXXXXXXXXX GPPS(1)PPAPVMHS(0.735)PS(0.265)R GPPS(76.43)PPAPVMHS(4.43)PS(-4.43)R 12 3 -0.14893 0 82211 0 0 89154 0 0 77870 0 0 88040 0 0 90365 0 0 89740 0 0 92200 0 0 98819 0 0 85129 0 0 22826 0 0 77776 0 0 84214 0 0 78817 0 0 90492 0 0 90984 0 0 90032 0 0 93570 0 0 99459 0 0 84296 0 0 23781 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 238540000 0 238540000 0 NaN 1639 967 232 232 1555;1556 1637;1638;1639;1640 1770;1772;1773 1967;1969;1970;1971 1770 1967 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9064 1772 1970 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11546 1772 1970 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11546 Q13573 518 Q13573 Q13573 SNW domain-containing protein 1 SNW1 sp|Q13573|SNW1_HUMAN SNW domain-containing protein 1 OS=Homo sapiens GN=SNW1 PE=1 SV=1 0.955295 16.3081 0.034433 56.225 34.027 56.225 1 S KFLEEAKQHGGSKRPSDSSRPKEHEHEGKKR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX RPS(0.955)DS(0.022)S(0.022)RPK RPS(16.31)DS(-16.31)S(-16.31)RPK 3 3 -0.40779 2866.8 0 0 3487.4 0 0 3064.8 0 0 3341.5 0 0 3188.4 0 0 2841.6 0 0 2878.3 0 0 3412.2 0 0 3306.3 0 0 2722.7 0 0 2713.5 0 0 3293.6 0 0 3075.7 0 0 3431.9 0 0 3224.3 0 0 2882.9 0 0 2956.4 0 0 3482.6 0 0 3244.2 0 0 2642.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 3115100 3115100 0 0 NaN 1640 967 518 518 3404 3616 3857 4282 3857 4282 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5360 3857 4282 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5360 3857 4282 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5360 Q13576 16 Q13576 Q13576 Ras GTPase-activating-like protein IQGAP2 IQGAP2 sp|Q13576|IQGA2_HUMAN Ras GTPase-activating-like protein IQGAP2 OS=Homo sapiens GN=IQGAP2 PE=1 SV=4 0.999997 55.1403 7.3437E-06 145.28 49.501 145.28 1 S MPHEELPSLQRPRYGSIVDDERLSAEEMDER X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX YGS(1)IVDDER Y(-55.14)GS(55.14)IVDDER 3 2 0.60345 36308 0 0 25003 0 0 41846 0 0 20705 0 0 59260 0 0 40856 0 0 60650 0 0 44917 0 0 23144 0 0 5428.6 0 0 34378 0 0 23595 0 0 42034 0 0 21846 0 0 59093 0 0 40114 0 0 60643 0 0 45062 0 0 24427 0 0 6151.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 43331000 43331000 0 0 NaN 1641 968 16 16 5383 5735 6118 6803 6118 6803 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12766 6118 6803 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12766 6118 6803 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12766 Q13586 257 Q13586 Q13586 Stromal interaction molecule 1 STIM1 sp|Q13586|STIM1_HUMAN Stromal interaction molecule 1 OS=Homo sapiens GN=STIM1 PE=1 SV=3 1 79.8049 0.00695861 79.805 63.686 79.805 1 S KKMMKDLEGLHRAEQSLHDLQERLHKAQEEH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX AEQS(1)LHDLQER AEQS(79.8)LHDLQER 4 3 0.186 24867 0 0 28454 0 0 28167 0 0 31291 0 0 25526 0 0 27409 0 0 26590 0 0 29316 0 0 34304 0 0 4572.1 0 0 23543 0 0 26896 0 0 28143 0 0 31893 0 0 26082 0 0 27679 0 0 27226 0 0 29470 0 0 33521 0 0 4983.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 44754000 44754000 0 0 NaN 1642 969 257 257 157 163 176 200 176 200 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9239 176 200 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9239 176 200 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9239 Q13586 575 Q13586 Q13586 Stromal interaction molecule 1 STIM1 sp|Q13586|STIM1_HUMAN Stromal interaction molecule 1 OS=Homo sapiens GN=STIM1 PE=1 SV=3 1 152.696 5.57255E-06 152.7 90.917 152.7 1 S IEGVHPGSLVEKLPDSPALAKKALLALNHGL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX LPDS(1)PALAK LPDS(152.7)PALAK 4 2 0.73627 14897 0 0 43304 0 0 16272 0 0 42269 0 0 23482 0 0 14578 0 0 22711 0 0 29011 0 0 47947 0 0 7764.1 0 0 14101 0 0 40902 0 0 16393 0 0 43019 0 0 23417 0 0 16044 0 0 23846 0 0 28775 0 0 46239 0 0 7982.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28569000 28569000 0 0 NaN 1643 969 575 575 2492 2631 2825 3152 2825 3152 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16187 2825 3152 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16187 2825 3152 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16187 Q13586 512 Q13586 Q13586 Stromal interaction molecule 1 STIM1 sp|Q13586|STIM1_HUMAN Stromal interaction molecule 1 OS=Homo sapiens GN=STIM1 PE=1 SV=3 0.999999 60.1798 0.010623 69.416 49.426 69.416 1 S SSVRQRLTEPQHGLGSQRDLTHSDSESSLHM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX LTEPQHGLGS(1)QR LT(-60.18)EPQHGLGS(60.18)QR 10 3 2.4792 13206 0 0 16565 0 0 12122 0 0 19915 0 0 19608 0 0 15541 0 0 22300 0 0 18267 0 0 18089 0 0 3178.8 0 0 12492 0 0 15667 0 0 12365 0 0 20173 0 0 19490 0 0 15812 0 0 22454 0 0 18313 0 0 18027 0 0 3416 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26538000 26538000 0 0 NaN 1644 969 512 512 2616 2763 2963 3300 2963 3300 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9795 2963 3300 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9795 2963 3300 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9795 Q13595 236 Q13595 Q13595 Transformer-2 protein homolog alpha TRA2A sp|Q13595|TRA2A_HUMAN Transformer-2 protein homolog alpha OS=Homo sapiens GN=TRA2A PE=1 SV=1 1 82.1504 0.00129156 107.03 69.699 107.03 1 S GGGGGGGGGGGRRRDSYYDRGYDRGYDRYED X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX RRDS(1)YYDR RRDS(82.15)Y(-82.15)Y(-83)DR 4 3 0.022332 6482.8 0 0 5727.7 0 0 5624.6 0 0 5512.6 0 0 9199.3 0 0 6541.6 0 0 10619 0 0 8197.7 0 0 6553.6 0 0 12044 0 0 6131.2 0 0 5409.6 0 0 5759.4 0 0 5689.8 0 0 9140.7 0 0 6554.5 0 0 10629 0 0 8521.6 0 0 6638.8 0 0 11530 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12823000 12823000 0 0 NaN 1645 970 236 236 3432 3645 3887 4315 3887 4315 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5354 3887 4315 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5354 3887 4315 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5354 Q13601 3 Q13601 Q13601 KRR1 small subunit processome component homolog KRR1 sp|Q13601|KRR1_HUMAN KRR1 small subunit processome component homolog OS=Homo sapiens GN=KRR1 PE=1 SV=4 0.989013 19.5433 4.40685E-05 66.435 38.26 66.435 1 S _____________MASPSLERPEKGAGKSEF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPXXXXXXX AS(0.989)PS(0.011)LERPEK AS(19.54)PS(-19.54)LERPEK 2 2 0.42285 43026 0 0 34223 0 0 46603 0 0 35469 0 0 22081 0 0 43342 0 0 23812 0 0 35182 0 0 35008 0 0 6478.7 0 0 40727 0 0 32336 0 0 46424 0 0 36469 0 0 23891 0 0 43002 0 0 24462 0 0 35802 0 0 34068 0 0 6914.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 197080000 197080000 0 0 NaN 1646 971 3 3 486 517 556 620 556 620 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10221 556 620 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10221 556 620 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10221 Q13614 630 Q13614 Q13614 Myotubularin-related protein 2 MTMR2 sp|Q13614|MTMR2_HUMAN Myotubularin-related protein 2 OS=Homo sapiens GN=MTMR2 PE=1 SV=4 0.563201 1.10563 0.000135399 120.66 85.703 120.66 1 S QREISNRSTSSSERASSPAQCVTPVQTVV__ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPXX AS(0.563)S(0.437)PAQCVTPVQTVV AS(1.11)S(-1.11)PAQCVT(-34.92)PVQT(-72.48)VV 2 2 3.0379 4335.2 0 0 7266.8 0 0 5367.9 0 0 6462.4 0 0 8923.1 0 0 5147.9 0 0 6923 0 0 8365.4 0 0 7242.9 0 0 37100 0 0 4106.1 0 0 6860.1 0 0 5385.5 0 0 6663.4 0 0 8817.2 0 0 5328.9 0 0 7151.8 0 0 9384.3 0 0 7133 0 0 35127 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29307000 29307000 0 0 NaN 1647 972 630 630 503 534 574 640 574 640 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17248 574 640 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17248 574 640 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17248 Q13615 647 Q13615 Q13615 Myotubularin-related protein 3 MTMR3 sp|Q13615|MTMR3_HUMAN Myotubularin-related protein 3 OS=Homo sapiens GN=MTMR3 PE=1 SV=3 0.92123 13.4886 0.0299777 54.241 42.276 54.241 1 S CSDPSLNEKWQEHRRSLELSSLAGPGEDPLS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.921)LELS(0.037)S(0.041)LAGPGEDPLSADSLGKPTR S(13.49)LELS(-13.91)S(-13.49)LAGPGEDPLS(-46.34)ADS(-52.21)LGKPT(-53.49)R 1 3 -0.72785 2851.2 0 0 3742.9 0 0 3709.1 0 0 2487.1 0 0 7699.4 0 0 3673.6 0 0 6898.1 0 0 6090.7 0 0 3181 0 0 28132 0 0 2701.2 0 0 3528.6 0 0 3732.9 0 0 2649.3 0 0 7562.9 0 0 3712.6 0 0 6958.3 0 0 6863.4 0 0 3296.3 0 0 26631 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8200200 8200200 0 0 NaN 1648 973 647 647 3931 4190 4472 4971 4472 4971 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21649 4472 4971 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21649 4472 4971 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21649 Q13615 613 Q13615 Q13615 Myotubularin-related protein 3 MTMR3 sp|Q13615|MTMR3_HUMAN Myotubularin-related protein 3 OS=Homo sapiens GN=MTMR3 PE=1 SV=3 0.82171 6.63592 2.66664E-23 274.46 243.78 274.46 1 S TSPDDPPLSRLPKTRSYDNLTTACDNTVPLA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP T(0.178)RS(0.822)YDNLTTACDNTVPLASR T(-6.64)RS(6.64)Y(-101.78)DNLT(-61.7)T(-83.38)ACDNT(-177.34)VPLAS(-234.47)R 3 3 1.384 8631.7 0 0 8100.4 0 0 7777.9 0 0 8804.9 0 0 10904 0 0 8227.8 0 0 10628 0 0 10296 0 0 8382.6 0 0 12286 0 0 8164.6 0 0 7656.2 0 0 7918.8 0 0 8988.3 0 0 10875 0 0 8321.9 0 0 10770 0 0 10618 0 0 8366.4 0 0 11807 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25232000 25232000 0 0 NaN 1649 973 613 613 4905 5230 5573 6195 5573 6195 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14124 5573 6195 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14124 5573 6195 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14124 Q13619 10 Q13619 Q13619 Cullin-4A CUL4A sp|Q13619|CUL4A_HUMAN Cullin-4A OS=Homo sapiens GN=CUL4A PE=1 SV=3 0.792278 5.81394 1.4903E-09 176.56 136.08 176.56 1 S ______MADEAPRKGSFSALVGRTNGLTKPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX KGS(0.792)FS(0.208)ALVGR KGS(5.81)FS(-5.81)ALVGR 3 3 -0.02222 15983 0 0 8057 0 0 16330 0 0 6981.1 0 0 26019 0 0 15273 0 0 24989 0 0 15661 0 0 7260.3 0 0 804.62 0 0 15125 0 0 7605.1 0 0 16540 0 0 7366.9 0 0 25800 0 0 14945 0 0 25001 0 0 15718 0 0 7915.7 0 0 1120.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 94143000 94143000 0 0 NaN 1650 974 10 10 2075 2195 2364 2634 2364 2634 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15579 2364 2634 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15579 2364 2634 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15579 Q13620 146 Q13620 Q13620 Cullin-4B CUL4B sp|Q13620|CUL4B_HUMAN Cullin-4B OS=Homo sapiens GN=CUL4B PE=1 SV=4 0.971595 16.8571 3.23903E-12 196.89 181.97 196.89 1 S DAKMAEESSSSSSSSSPTAATSQQQQLKNKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPPPPPXXX MAEESSSSSSS(0.001)S(0.02)S(0.972)PT(0.007)AATSQQQQLK MAEES(-72.73)S(-65.39)S(-57.9)S(-55.41)S(-46.91)S(-38.23)S(-29.38)S(-16.86)S(16.86)PT(-21.38)AAT(-54.46)S(-70.63)QQQQLK 13 3 3.297 3383.9 0 0 3455.6 0 0 3453.4 0 0 4030.5 0 0 3426 0 0 3812.6 0 0 3394.4 0 0 5219.8 0 0 5013.4 0 0 9859.3 0 0 3202.3 0 0 3267.6 0 0 3473 0 0 4099.8 0 0 3479.4 0 0 3867.5 0 0 3501.1 0 0 5478.4 0 0 4878 0 0 9404.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16607000 16607000 0 0 NaN 1651 975 146 146 2660 2808 3011 3350 3011 3350 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11496 3011 3350 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11496 3011 3350 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11496 Q13625 698 Q13625 Q13625 Apoptosis-stimulating of p53 protein 2 TP53BP2 sp|Q13625|ASPP2_HUMAN Apoptosis-stimulating of p53 protein 2 OS=Homo sapiens GN=TP53BP2 PE=1 SV=2 0.999368 31.9932 0.00174018 96.82 64.758 96.82 1 S SVQENHENERIPRPLSPTKLLPFLSNPYRNQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX IPRPLS(0.999)PT(0.001)K IPRPLS(31.99)PT(-31.99)K 6 3 -0.074423 9978.3 0 0 22995 0 0 9857.9 0 0 23391 0 0 17262 0 0 9077 0 0 17879 0 0 16852 0 0 23330 0 0 2206 0 0 9441.5 0 0 21725 0 0 10025 0 0 23763 0 0 17094 0 0 9838.9 0 0 18319 0 0 16669 0 0 22789 0 0 2467.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 133240000 133240000 0 0 NaN 1652 976 698 698 1913 2021 2182 2442 2182 2442 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14220 2182 2442 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14220 2182 2442 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14220 Q13625 480 Q13625 Q13625 Apoptosis-stimulating of p53 protein 2 TP53BP2 sp|Q13625|ASPP2_HUMAN Apoptosis-stimulating of p53 protein 2 OS=Homo sapiens GN=TP53BP2 PE=1 SV=2 0.815009 6.44012 0.000552365 108.72 76.302 108.72 1 S QSNAPPSFGTLRKNQSSEDILRDAQVANKNV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX NQS(0.815)S(0.185)EDILR NQS(6.44)S(-6.44)EDILR 3 2 0.60702 14245 0 0 18545 0 0 12621 0 0 16560 0 0 16475 0 0 12456 0 0 16094 0 0 17895 0 0 17987 0 0 6727.4 0 0 13474 0 0 17507 0 0 12849 0 0 17059 0 0 16488 0 0 12750 0 0 16453 0 0 17942 0 0 17668 0 0 6748.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11093000 11093000 0 0 NaN 1653 976 480 480 2144;2899 2266;3073 3291 3648 3291 3648 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11481 3291 3648 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11481 3291 3648 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11481 Q13625 481 Q13625 Q13625 Apoptosis-stimulating of p53 protein 2 TP53BP2 sp|Q13625|ASPP2_HUMAN Apoptosis-stimulating of p53 protein 2 OS=Homo sapiens GN=TP53BP2 PE=1 SV=2 0.729444 4.30735 0.000592027 114.69 73.313 114.69 1 S SNAPPSFGTLRKNQSSEDILRDAQVANKNVA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX KNQS(0.271)S(0.729)EDILR KNQS(-4.31)S(4.31)EDILR 5 3 0.97818 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1654 976 481 481 2144;2899 2266;3073 2440 2717 2440 2717 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11004 2440 2717 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11004 2440 2717 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11004 Q13769 28 Q13769 Q13769 THO complex subunit 5 homolog THOC5 sp|Q13769|THOC5_HUMAN THO complex subunit 5 homolog OS=Homo sapiens GN=THOC5 PE=1 SV=2 0.999685 35.0127 0.000264263 101.61 69.193 101.61 1 S VIRSDGAPAEGKRNRSDTEQEGKYYSEEAEV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX NRS(1)DTEQEGK NRS(35.01)DT(-35.01)EQEGK 3 3 0.1503 4398.1 0 0 5730 0 0 3887.3 0 0 5691.2 0 0 4403.5 0 0 4222.4 0 0 5702.6 0 0 5285.3 0 0 5496.8 0 0 2135 0 0 4159.8 0 0 5412.7 0 0 3952.4 0 0 5822.3 0 0 4456.4 0 0 4315.2 0 0 5736.7 0 0 5324.6 0 0 5432.4 0 0 2132.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5642200 5642200 0 0 NaN 1655 978 28 28 2905 3079 3297 3656 3297 3656 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5559 3297 3656 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5559 3297 3656 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5559 Q13813 1031 Q13813 Q13813 Spectrin alpha chain, non-erythrocytic 1 SPTAN1 sp|Q13813|SPTN1_HUMAN Spectrin alpha chain, non-erythrocytic 1 OS=Homo sapiens GN=SPTAN1 PE=1 SV=3 0.719294 4.08655 1.3272E-09 175.39 143.31 175.39 1 S VPAAYVKKLDPAQSASRENLLEEQGSIALRQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPPX LDPAQS(0.281)AS(0.719)RENLLEEQGSIALR LDPAQS(-4.09)AS(4.09)RENLLEEQGS(-122.72)IALR 8 3 -0.26333 4772.5 0 0 4044.6 0 0 5437.3 0 0 3693 0 0 4219.8 0 0 6435.5 0 0 3782 0 0 4447.1 0 0 3417 0 0 35044 0 0 4518.5 0 0 3818.8 0 0 5421.1 0 0 3857.4 0 0 4347.7 0 0 6369.2 0 0 3860.8 0 0 5593.7 0 0 3387 0 0 33101 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9831000 9831000 0 0 NaN 1656 979 1031 1031 2313 2445 2634 2944 2634 2944 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18717 2634 2944 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18717 2634 2944 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18717 Q13884 219 Q13884 Q13884 Beta-1-syntrophin SNTB1 sp|Q13884|SNTB1_HUMAN Beta-1-syntrophin OS=Homo sapiens GN=SNTB1 PE=1 SV=3 0.998705 28.8732 1.35478E-06 138.09 119.02 138.09 1 S GSPVSEIGWETPPPESPRLGGSTSDPPSSQS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX GSPVSEIGWET(0.001)PPPES(0.999)PR GS(-120.19)PVS(-112.51)EIGWET(-28.87)PPPES(28.87)PR 16 3 -0.39651 34554 0 0 23360 0 0 35636 0 0 21818 0 0 22226 0 0 37449 0 0 20297 0 0 31214 0 0 26569 0 0 89661 0 0 32701 0 0 22058 0 0 35653 0 0 22747 0 0 23326 0 0 36930 0 0 20925 0 0 34253 0 0 25949 0 0 85149 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 68381000 68381000 0 0 NaN 1657 981 219 219 1628;2077 1715;2197 1854;2366 2066;2067;2636 1854 2066 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17927 1854 2066 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17927 1854 2066 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17927 Q13905 311 Q13905 Q13905 Rap guanine nucleotide exchange factor 1 RAPGEF1 sp|Q13905|RPGF1_HUMAN Rap guanine nucleotide exchange factor 1 OS=Homo sapiens GN=RAPGEF1 PE=1 SV=3 0.755137 4.89225 5.44857E-11 204.94 173.31 204.94 1 S SPTRVAVVAPMSRATSGSSLPVGINRQDFDV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX AT(0.245)S(0.755)GSSLPVGINR AT(-4.89)S(4.89)GS(-40.38)S(-69.29)LPVGINR 3 2 1.757 19339 0 0 21262 0 0 19907 0 0 20883 0 0 12560 0 0 18615 0 0 13877 0 0 19302 0 0 23437 0 0 10432 0 0 18302 0 0 20083 0 0 19925 0 0 21428 0 0 13208 0 0 18788 0 0 14324 0 0 19649 0 0 22720 0 0 10270 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17941000 17941000 0 0 NaN 1658 982 311 311 532 565 606 678 606 678 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13843 606 678 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13843 606 678 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13843 Q13950 28 Q13950 Q13950 Runt-related transcription factor 2 RUNX2 sp|Q13950|RUNX2_HUMAN Runt-related transcription factor 2 OS=Homo sapiens GN=RUNX2 PE=1 SV=2 0.999617 34.2294 4.95729E-05 129.43 102.09 129.43 1 S CQQNFFWDPSTSRRFSPPSSSLQPGKMSDVS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX RFS(1)PPSSSLQPGK RFS(34.23)PPS(-34.23)S(-53.96)S(-57.45)LQPGK 3 3 -0.54852 17392 0 0 5235.4 0 0 16737 0 0 6398.2 0 0 6122.8 0 0 16885 0 0 6020.9 0 0 9704.3 0 0 5831 0 0 6232.3 0 0 16455 0 0 4952.3 0 0 16760 0 0 6667 0 0 6838.5 0 0 16378 0 0 6128.4 0 0 10200 0 0 5761.5 0 0 6093.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14876000 14876000 0 0 NaN 1659 983 28 28 3234 3430 3665 4066 3665 4066 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13744 3665 4066 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13744 3665 4066 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13744 Q14004 383 Q14004 Q14004 Cyclin-dependent kinase 13 CDK13 sp|Q14004|CDK13_HUMAN Cyclin-dependent kinase 13 OS=Homo sapiens GN=CDK13 PE=1 SV=2 0.999832 37.7412 1.02266E-06 147.7 131.08 147.7 1 S PSYSRHSSYERGGDVSPSPYSSSSWRRSRSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPXXXXX GGDVS(1)PSPYSSSSWR GGDVS(37.74)PS(-37.74)PY(-91.97)S(-71.78)S(-77.02)S(-82.2)S(-87.9)WR 5 2 -0.44078 44538 0 0 18760 0 0 45016 0 0 18277 0 0 22889 0 0 49433 0 0 22518 0 0 29972 0 0 20074 0 0 12975 0 0 42147 0 0 17719 0 0 45029 0 0 19296 0 0 24527 0 0 47939 0 0 22873 0 0 31209 0 0 19910 0 0 12911 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 48001000 48001000 0 0 NaN 1660 984 383 383 1429 1506 1615 1785 1615 1785 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13537 1615 1785 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13537 1615 1785 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13537 Q14004 525 Q14004 Q14004 Cyclin-dependent kinase 13 CDK13 sp|Q14004|CDK13_HUMAN Cyclin-dependent kinase 13 OS=Homo sapiens GN=CDK13 PE=1 SV=2 0.963713 14.2969 0.000102421 118.4 94.409 118.4 1 S NHVKDVKKIKIEHAPSPSSGGTLKNDKAKTK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPXXXXXXX IEHAPS(0.964)PS(0.036)SGGTLK IEHAPS(14.3)PS(-14.3)S(-33.26)GGT(-60.46)LK 6 3 0.23333 18363 0 0 12689 0 0 20810 0 0 13287 0 0 12349 0 0 17577 0 0 13869 0 0 16207 0 0 13863 0 0 7989.4 0 0 17385 0 0 11990 0 0 20713 0 0 13675 0 0 13053 0 0 17425 0 0 14044 0 0 16551 0 0 13679 0 0 7898.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16007000 16007000 0 0 NaN 1661 984 525 525 1815 1915 2069 2319 2069 2319 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11701 2069 2319 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11701 2069 2319 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11701 Q14103 82 Q14103 Q14103 Heterogeneous nuclear ribonucleoprotein D0 HNRNPD sp|Q14103|HNRPD_HUMAN Heterogeneous nuclear ribonucleoprotein D0 OS=Homo sapiens GN=HNRNPD PE=1 SV=1 0.452009 0 0.0425944 43.813 37.709 43.813 S KIDASKNEEDEGHSNSSPRHSEAATAQREEW X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX NEEDEGHS(0.096)NS(0.452)S(0.452)PR NEEDEGHS(-6.73)NS(0)S(0)PR 10 3 -0.33331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1662 985 82 82 1786;2798 1885;2967 3179 3531 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4610 3179 3531 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4610 3179 3531 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4610 Q14103 83 Q14103 Q14103 Heterogeneous nuclear ribonucleoprotein D0 HNRNPD sp|Q14103|HNRPD_HUMAN Heterogeneous nuclear ribonucleoprotein D0 OS=Homo sapiens GN=HNRNPD PE=1 SV=1 0.990006 19.9653 5.35026E-17 248.16 222.93 248.16 1 S IDASKNEEDEGHSNSSPRHSEAATAQREEWK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX IDASKNEEDEGHSNS(0.01)S(0.99)PR IDAS(-153.77)KNEEDEGHS(-48.33)NS(-19.97)S(19.97)PR 16 3 0.47216 29110 0 0 41300 0 0 30864 0 0 38173 0 0 38000 0 0 33921 0 0 62688 0 0 51241 0 0 40911 0 0 7389.2 0 0 27552 0 0 38997 0 0 31112 0 0 39318 0 0 38470 0 0 34421 0 0 62029 0 0 50950 0 0 41291 0 0 8143.7 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 1045300000 1045300000 0 0 NaN 1663 985 83 83 1786;2798 1885;2967 2032 2263;2264 2032 2263 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7545 2032 2263 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7545 2032 2263 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7545 Q14103 190 Q14103 Q14103 Heterogeneous nuclear ribonucleoprotein D0 HNRNPD sp|Q14103|HNRPD_HUMAN Heterogeneous nuclear ribonucleoprotein D0 OS=Homo sapiens GN=HNRNPD PE=1 SV=1 0.995463 23.4128 0.000169758 104.94 83.382 104.94 1 S MKTKEPVKKIFVGGLSPDTPEEKIREYFGGF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPXXXXXXXX IFVGGLS(0.995)PDT(0.005)PEEK IFVGGLS(23.41)PDT(-23.41)PEEK 7 3 -1.7055 3933.4 0 0 5678.1 0 0 4473.1 0 0 6040.8 0 0 5080.8 0 0 4863.7 0 0 5050.8 0 0 5337.3 0 0 5463.3 0 0 8437.6 0 0 3724 0 0 5365.9 0 0 4480.5 0 0 6161.5 0 0 5120.1 0 0 4949.5 0 0 5154.1 0 0 5589.6 0 0 5373.2 0 0 8068.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5940800 5940800 0 0 0.62544 1664 985 190 190 1835 1938 2094 2348 2094 2348 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20982 2094 2348 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20982 2094 2348 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20982 Q14135 149 Q14135 Q14135 Transcription cofactor vestigial-like protein 4 VGLL4 sp|Q14135|VGLL4_HUMAN Transcription cofactor vestigial-like protein 4 OS=Homo sapiens GN=VGLL4 PE=1 SV=4 0.822615 6.73935 6.82799E-05 101.58 75.141 101.58 1 S ALTKNSLDASRPAGLSPTLTPGERQQNRPSV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPPXXXXXXX NSLDASRPAGLS(0.823)PT(0.174)LT(0.003)PGER NS(-50.81)LDAS(-38.71)RPAGLS(6.74)PT(-6.74)LT(-24.41)PGER 12 3 -1.0561 13858 0 0 13819 0 0 14238 0 0 13454 0 0 15330 0 0 14761 0 0 16991 0 0 15771 0 0 13368 0 0 18009 0 0 13114 0 0 13052 0 0 14331 0 0 13858 0 0 15513 0 0 14784 0 0 17117 0 0 16323 0 0 13344 0 0 17322 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30756000 30756000 0 0 NaN 1665 986 149 149 2915 3089 3309 3669 3309 3669 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14227 3309 3669 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14227 3309 3669 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14227 Q14135 52 Q14135 Q14135 Transcription cofactor vestigial-like protein 4 VGLL4 sp|Q14135|VGLL4_HUMAN Transcription cofactor vestigial-like protein 4 OS=Homo sapiens GN=VGLL4 PE=1 SV=4 0.952139 12.9876 0.000339475 110.58 80.415 110.58 1 S VASALSSHRTGPPPISPSKRKFSMEPGDEDL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX TGPPPIS(0.952)PS(0.048)K T(-53.19)GPPPIS(12.99)PS(-12.99)K 7 2 0.95646 26019 0 0 18962 0 0 27167 0 0 18593 0 0 16500 0 0 25124 0 0 16991 0 0 20807 0 0 19866 0 0 25601 0 0 24625 0 0 17911 0 0 27160 0 0 19218 0 0 17384 0 0 24886 0 0 17351 0 0 21810 0 0 19480 0 0 24588 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13012000 13012000 0 0 NaN 1666 986 52 52 4723 5034 5363 5964 5363 5964 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11899 5363 5964 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11899 5363 5964 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11899 Q14149 560 Q14149 Q14149 MORC family CW-type zinc finger protein 3 MORC3 sp|Q14149|MORC3_HUMAN MORC family CW-type zinc finger protein 3 OS=Homo sapiens GN=MORC3 PE=1 SV=3 0.752944 4.8397 0.000106975 116.06 82.656 116.06 1 S LSTRSSILNAKNRRLSSQFENSVYKGDDDDE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX RLS(0.753)S(0.247)QFENSVYK RLS(4.84)S(-4.84)QFENS(-57.18)VY(-96.67)K 3 3 0.90923 6256.3 0 0 7008.2 0 0 7497 0 0 6446.9 0 0 9078.5 0 0 7041.7 0 0 10621 0 0 8091.7 0 0 6683.8 0 0 12404 0 0 5924.7 0 0 6617.2 0 0 7500 0 0 6663.3 0 0 9137.6 0 0 7068.2 0 0 10629 0 0 8449.6 0 0 6761.9 0 0 11868 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11608000 11608000 0 0 NaN 1667 987 560 560 3348 3550 3788 4206 3788 4206 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15391 3788 4206 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15391 3788 4206 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15391 Q14151;Q15424 287;288 Q14151;Q15424 Q15424 Scaffold attachment factor B2;Scaffold attachment factor B1 SAFB2;SAFB sp|Q14151|SAFB2_HUMAN Scaffold attachment factor B2 OS=Homo sapiens GN=SAFB2 PE=1 SV=1;sp|Q15424|SAFB1_HUMAN Scaffold attachment factor B1 OS=Homo sapiens GN=SAFB PE=1 SV=4 1 145.554 7.2771E-06 145.55 107.26 145.55 1 S LASESTAHAQSSKADSLLAVVKREPAEQPGD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX ADS(1)LLAVVK ADS(145.55)LLAVVK 3 2 -0.051176 15746 0 0 15387 0 0 16672 0 0 14841 0 0 17493 0 0 16869 0 0 17011 0 0 18122 0 0 18459 0 0 16755 0 0 14903 0 0 14533 0 0 16744 0 0 15305 0 0 17698 0 0 16866 0 0 17379 0 0 18634 0 0 18152 0 0 16196 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20027000 20027000 0 0 NaN 1668 988;1076 287;288 288 121 127 136 151 136 151 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21078 136 151 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21078 136 151 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21078 Q14151 787 Q14151 Q14151 Scaffold attachment factor B2 SAFB2 sp|Q14151|SAFB2_HUMAN Scaffold attachment factor B2 OS=Homo sapiens GN=SAFB2 PE=1 SV=1 1 85.8373 0.00500399 85.837 53.775 85.837 1 S DRGQYQDHAIDRREGSRPMMGDHRDGQHYGD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX EGS(1)RPMMGDHR EGS(85.84)RPMMGDHR 3 3 0.13113 13178 0 0 13476 0 0 14340 0 0 15268 0 0 11717 0 0 14477 0 0 13297 0 0 13087 0 0 15339 0 0 5590.9 0 0 12474 0 0 12741 0 0 14344 0 0 15555 0 0 12070 0 0 14539 0 0 13515 0 0 13350 0 0 15049 0 0 5567.4 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 16852000 16852000 0 0 NaN 1669 988 787 787 981 1035;1036 1121;1122 1236;1237 1122 1237 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6018 1122 1237 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6018 1122 1237 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6018 Q14152 1364 Q14152 Q14152 Eukaryotic translation initiation factor 3 subunit A EIF3A sp|Q14152|EIF3A_HUMAN Eukaryotic translation initiation factor 3 subunit A OS=Homo sapiens GN=EIF3A PE=1 SV=1 1 74.6004 0.0172773 74.6 39.278 74.6 1 S GEKEKASWRAEKDRESLRRTKNETDEDGWTT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX DRES(1)LRR DRES(74.6)LRR 4 3 0.24178 12873 0 0 6781.9 0 0 13683 0 0 7098.9 0 0 10537 0 0 14105 0 0 9690.2 0 0 10612 0 0 6525.1 0 0 7035.3 0 0 12184 0 0 6408.4 0 0 13691 0 0 7382.2 0 0 10863 0 0 13795 0 0 9817.8 0 0 10992 0 0 6572.5 0 0 6870.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12757000 12757000 0 0 NaN 1670 989 1364 1364 786 834 890 981 890 981 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4946 890 981 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4946 890 981 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4946 Q14153 118 Q14153 Q14153 Protein FAM53B FAM53B sp|Q14153|FA53B_HUMAN Protein FAM53B OS=Homo sapiens GN=FAM53B PE=1 SV=2 0.464918 0 2.99271E-23 281.24 239.02 281.24 S GNPSAPPSKRQCRSLSFSDEMSSCRTSWRPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX S(0.07)LS(0.465)FS(0.465)DEMSSCR S(-8.21)LS(0)FS(0)DEMS(-90.56)S(-121.8)CR 3 2 -0.55271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1671 990 118 118 3982 4245 4530 5036 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16129 4530 5036 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16129 4530 5036 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16129 Q14153 120 Q14153 Q14153 Protein FAM53B FAM53B sp|Q14153|FA53B_HUMAN Protein FAM53B OS=Homo sapiens GN=FAM53B PE=1 SV=2 0.464918 0 2.99271E-23 281.24 239.02 281.24 S PSAPPSKRQCRSLSFSDEMSSCRTSWRPLGS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.07)LS(0.465)FS(0.465)DEMSSCR S(-8.21)LS(0)FS(0)DEMS(-90.56)S(-121.8)CR 5 2 -0.55271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1672 990 120 120 3982 4245 4530 5036 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16129 4530 5036 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16129 4530 5036 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16129 Q14153 167 Q14153 Q14153 Protein FAM53B FAM53B sp|Q14153|FA53B_HUMAN Protein FAM53B OS=Homo sapiens GN=FAM53B PE=1 SV=2 0.991078 22.6648 1.68289E-07 175.34 82.895 175.34 1 S VQRYSNGFSTMQRSSSFSLPSRANVLSSPCD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX S(0.005)S(0.002)S(0.991)FS(0.001)LPSR S(-22.66)S(-26.11)S(22.66)FS(-29.43)LPS(-100.78)R 3 2 0.2502 23742 0 0 15440 0 0 26966 0 0 14903 0 0 16902 0 0 25849 0 0 15757 0 0 18381 0 0 14394 0 0 4401.6 0 0 22478 0 0 14583 0 0 26843 0 0 15511 0 0 17728 0 0 25336 0 0 16057 0 0 18859 0 0 14260 0 0 4570 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 59218000 59218000 0 0 NaN 1673 990 167 167 4422 4712 5016 5564 5016 5564 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13469 5016 5564 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13469 5016 5564 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13469 Q14155 249 Q14155 Q14155 Rho guanine nucleotide exchange factor 7 ARHGEF7 sp|Q14155|ARHG7_HUMAN Rho guanine nucleotide exchange factor 7 OS=Homo sapiens GN=ARHGEF7 PE=1 SV=2 0.999802 37.032 0.00673002 79.875 44.352 79.875 1 S PSNYVREVKASEKPVSPKSGTLKSPPKGFDT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX ASEKPVS(1)PK AS(-37.03)EKPVS(37.03)PK 7 3 -0.70934 43284 0 0 23439 0 0 46108 0 0 28044 0 0 25632 0 0 39407 0 0 26991 0 0 33076 0 0 29532 0 0 2729.6 0 0 40969 0 0 22169 0 0 46018 0 0 28697 0 0 27242 0 0 38919 0 0 27479 0 0 33505 0 0 29031 0 0 3335.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 80429000 80429000 0 0 NaN 1674 991 249 249 452 481 516 578 516 578 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8950 516 578 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8950 516 578 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8950 Q14155 676 Q14155 Q14155 Rho guanine nucleotide exchange factor 7 ARHGEF7 sp|Q14155|ARHG7_HUMAN Rho guanine nucleotide exchange factor 7 OS=Homo sapiens GN=ARHGEF7 PE=1 SV=2 0.92117 10.6765 0.0174264 60.49 20.377 60.49 1 S LRPSAALCYKEDLSKSPKTMKKLLPKRKPER X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPXXXXXXXXXXXXX EDLS(0.079)KS(0.921)PK EDLS(-10.68)KS(10.68)PK 6 3 0.10852 102060 0 0 48580 0 0 105850 0 0 50011 0 0 59418 0 0 103290 0 0 60492 0 0 71910 0 0 47458 0 0 4152.6 0 0 96594 0 0 45900 0 0 105800 0 0 52119 0 0 63042 0 0 100770 0 0 61167 0 0 73473 0 0 47380 0 0 5574.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 134620000 134620000 0 0 NaN 1675 991 676 676 904 957 1037 1145 1037 1145 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10108 1037 1145 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10108 1037 1145 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10108 Q14155;Q15052 518;488 Q14155;Q15052 Q15052 Rho guanine nucleotide exchange factor 7;Rho guanine nucleotide exchange factor 6 ARHGEF7;ARHGEF6 sp|Q14155|ARHG7_HUMAN Rho guanine nucleotide exchange factor 7 OS=Homo sapiens GN=ARHGEF7 PE=1 SV=2;sp|Q15052|ARHG6_HUMAN Rho guanine nucleotide exchange factor 6 OS=Homo sapiens GN=ARHGEF6 PE=1 SV=2 0.888468 9.01242 0.000477491 112.85 98.331 112.85 1 S LFPNVLLMLSASPRMSGFIYQGKLPTTGMTI;LFSNVLIMLSASPRMSGFIYQGKIPIAGTVV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPXXXXXXXX MS(0.888)GFIY(0.112)QGK MS(9.01)GFIY(-9.01)QGK 2 2 0.07556 43179 0 0 8123.1 0 0 46202 0 0 7711 0 0 39731 0 0 44515 0 0 44903 0 0 35458 0 0 8910 0 0 24043 0 0 40870 0 0 7671.2 0 0 46279 0 0 8533.9 0 0 40740 0 0 42909 0 0 44474 0 0 36643 0 0 10318 0 0 23460 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 164810000 164810000 0 0 NaN 1676 991;1051 518;488 488 2742 2908 3118 3465 3118 3465 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19665 3118 3465 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19665 3118 3465 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19665 Q14156 694 Q14156 Q14156 Protein EFR3 homolog A EFR3A sp|Q14156|EFR3A_HUMAN Protein EFR3 homolog A OS=Homo sapiens GN=EFR3A PE=1 SV=2 0.999999 63.0085 1.8255E-07 159.73 124.82 159.73 1 S LSVPYVPQVTDEDRLSRRKSIVDTVSIQVDI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPXXXXXXXXXXXXXX LSVPYVPQVTDEDRLS(1)R LS(-152.28)VPY(-150.31)VPQVT(-63.01)DEDRLS(63.01)R 16 3 0.36266 6794.1 0 0 5070 0 0 6210.2 0 0 5575.6 0 0 5476.5 0 0 6988.9 0 0 6101.8 0 0 7078.6 0 0 5057.3 0 0 21158 0 0 6426.8 0 0 4792.3 0 0 6279.1 0 0 5716.7 0 0 5608.7 0 0 6983.2 0 0 6152.5 0 0 7734.4 0 0 5034.3 0 0 20086 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23191000 23191000 0 0 NaN 1677 992 694 694 2609 2756 2956 3293 2956 3293 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19337 2956 3293 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19337 2956 3293 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19337 Q14157 859 Q14157 Q14157 Ubiquitin-associated protein 2-like UBAP2L sp|Q14157|UBP2L_HUMAN Ubiquitin-associated protein 2-like OS=Homo sapiens GN=UBAP2L PE=1 SV=2 0.999999 65.5044 6.73948E-07 144.82 108.79 144.82 1 S TPLTGRDGSLASNPYSGDLTKFGRGDASSPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPXXXXXXXXXX DGSLASNPYS(1)GDLTK DGS(-85.97)LAS(-66.92)NPY(-65.5)S(65.5)GDLT(-72.85)K 10 3 -0.35672 10285 0 0 17036 0 0 9822.5 0 0 14674 0 0 14324 0 0 9692.5 0 0 12548 0 0 14000 0 0 17088 0 0 7137.9 0 0 9730.9 0 0 16080 0 0 9969.1 0 0 15131 0 0 14250 0 0 10005 0 0 12982 0 0 14092 0 0 16668 0 0 7045.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25786000 25786000 0 0 NaN 1678 993 859 859 690 734 782 864 782 864 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15732 782 864 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15732 782 864 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15732 Q14157 605 Q14157 Q14157 Ubiquitin-associated protein 2-like UBAP2L sp|Q14157|UBP2L_HUMAN Ubiquitin-associated protein 2-like OS=Homo sapiens GN=UBAP2L PE=1 SV=2 0.794759 7.13816 0.000715244 99.93 83.834 99.93 2 S PLYEQRSTQTRRYPSSISSSPQKDLTQAKNG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPXX RY(0.015)PS(0.161)S(0.795)IS(0.075)S(0.608)S(0.346)PQKDLTQAK RY(-16.53)PS(-7.14)S(7.14)IS(-11.84)S(2.43)S(-2.43)PQKDLT(-36.36)QAK 5 3 0.84696 0 13087 0 0 11738 0 0 13682 0 0 10534 0 0 5590.7 0 0 13141 0 0 5703.6 0 0 11192 0 0 13997 0 0 10557 0 0 12385 0 0 11082 0 0 13644 0 0 10931 0 0 6160.7 0 0 13051 0 0 6027.5 0 0 11620 0 0 13459 0 0 10200 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 10973000 0 10973000 0 NaN 1679 993 605 605 3566;3567;5412 3787;3788;3789;5765 4041 4493 4041 4493 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13879 4041 4493 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13879 4041 4493 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13879 Q14157 608 Q14157 Q14157 Ubiquitin-associated protein 2-like UBAP2L sp|Q14157|UBP2L_HUMAN Ubiquitin-associated protein 2-like OS=Homo sapiens GN=UBAP2L PE=1 SV=2 0.607912 2.43055 3.71096E-07 146.27 115.31 99.93 2 S EQRSTQTRRYPSSISSSPQKDLTQAKNGFSS X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPXXXXX RY(0.015)PS(0.161)S(0.795)IS(0.075)S(0.608)S(0.346)PQKDLTQAK RY(-16.53)PS(-7.14)S(7.14)IS(-11.84)S(2.43)S(-2.43)PQKDLT(-36.36)QAK 8 3 0.84696 0 13087 0 0 11738 0 0 13682 0 0 10534 0 0 5590.7 0 0 13141 0 0 5703.6 0 0 11192 0 0 13997 0 0 10557 0 0 12385 0 0 11082 0 0 13644 0 0 10931 0 0 6160.7 0 0 13051 0 0 6027.5 0 0 11620 0 0 13459 0 0 10200 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 10973000 0 10973000 0 NaN 1680 993 608 608 3566;3567;5412 3787;3788;3789;5765 4041 4493 4041 4493 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13879 4039 4490 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9798 4039 4490 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9798 Q14157 609 Q14157 Q14157 Ubiquitin-associated protein 2-like UBAP2L sp|Q14157|UBP2L_HUMAN Ubiquitin-associated protein 2-like OS=Homo sapiens GN=UBAP2L PE=1 SV=2 0.978083 16.4986 1.02104E-22 260.41 220.73 260.41 1 S QRSTQTRRYPSSISSSPQKDLTQAKNGFSSV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPXXXXXX RYPSSISS(0.022)S(0.978)PQKDLTQAK RY(-152.76)PS(-74.79)S(-77.34)IS(-48.73)S(-16.5)S(16.5)PQKDLT(-78.59)QAK 9 4 0.44365 56409 0 0 53570 0 0 60560 0 0 46216 0 0 36014 0 0 62172 0 0 41167 0 0 56084 0 0 54565 0 0 10633 0 0 53393 0 0 50564 0 0 60451 0 0 48158 0 0 38082 0 0 61550 0 0 42024 0 0 56813 0 0 53271 0 0 11311 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 380140000 380140000 0 0 NaN 1681 993 609 609 3566;3567;5412 3787;3788;3789;5765 4040;6152 4492;6839 4040 4492 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13014 4040 4492 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13014 4040 4492 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13014 Q14157 453 Q14157 Q14157 Ubiquitin-associated protein 2-like UBAP2L sp|Q14157|UBP2L_HUMAN Ubiquitin-associated protein 2-like OS=Homo sapiens GN=UBAP2L PE=1 SV=2 0.577979 1.57865 1.9623E-05 128.17 98.487 128.17 1 S KSPAVATSTAAPPPPSSPLPSKSTSAPQMSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);Phospho (STY);X XPPPPPPPPPPPPPPPPPPPPPXXXXXXXXX SPAVATSTAAPPPPS(0.578)S(0.402)PLPS(0.02)K S(-85.02)PAVAT(-69.24)S(-62.98)T(-62.98)AAPPPPS(1.58)S(-1.58)PLPS(-14.57)K 15 3 0.44537 13328 0 0 15483 0 0 14278 0 0 16176 0 0 12856 0 0 13655 0 0 15139 0 0 15591 0 0 18267 0 0 20879 0 0 12615 0 0 14630 0 0 14310 0 0 16527 0 0 13165 0 0 13863 0 0 15386 0 0 16193 0 0 17891 0 0 20021 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 153630000 153630000 0 0 NaN 1682 993 453 453 4077 4347 4637 5150 4637 5150 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14119 4637 5150 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14119 4637 5150 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14119 Q14157 467 Q14157 Q14157 Ubiquitin-associated protein 2-like UBAP2L sp|Q14157|UBP2L_HUMAN Ubiquitin-associated protein 2-like OS=Homo sapiens GN=UBAP2L PE=1 SV=2 0.997981 27.2727 2.13196E-09 175.39 158.99 172.05 1;2 S PSSPLPSKSTSAPQMSPGSSDNQSSSPQPAQ X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPPP STSAPQMS(0.998)PGS(0.002)SDNQSSSPQPAQQK S(-47.49)T(-47.49)S(-40.09)APQMS(27.27)PGS(-27.27)S(-48.02)DNQS(-85.5)S(-91.64)S(-97.69)PQPAQQK 8 3 -0.090905 18256 6996.1 0 15097 6462.4 0 15073 7459.2 0 15231 7497.2 0 12919 5930.6 0 15476 7490.5 0 13453 6562.4 0 17438 7477.2 0 14934 8074.9 0 4685.8 6515.1 0 17263 6621.9 0 14262 6110.7 0 15335 7466.8 0 15635 7634.6 0 13246 6119 0 15535 7520.5 0 13709 6691.1 0 17557 7697 0 14673 7903.4 0 4815.8 6307.8 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 183790000 171580000 12213000 0 NaN 1683 993 467 467 4516 4810;4811;4812 5123;5124;5125 5689;5690;5691 5123 5689 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7470 5124 5690 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9352 5124 5690 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9352 Q14157 476 Q14157 Q14157 Ubiquitin-associated protein 2-like UBAP2L sp|Q14157|UBP2L_HUMAN Ubiquitin-associated protein 2-like OS=Homo sapiens GN=UBAP2L PE=1 SV=2 0.603729 1.89686 8.38576E-05 111.04 99.189 111.04 2 S TSAPQMSPGSSDNQSSSPQPAQQKLKQQKKK X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPXXXXXXX STS(0.001)APQMS(0.919)PGS(0.064)S(0.016)DNQS(0.005)S(0.604)S(0.391)PQPAQQK S(-38.67)T(-38.2)S(-30.62)APQMS(11.6)PGS(-11.6)S(-17.63)DNQS(-20.52)S(1.9)S(-1.9)PQPAQQK 17 4 -0.78596 0 6996.1 0 0 6462.4 0 0 7459.2 0 0 7497.2 0 0 5930.6 0 0 7490.5 0 0 6562.4 0 0 7477.2 0 0 8074.9 0 0 6515.1 0 0 6621.9 0 0 6110.7 0 0 7466.8 0 0 7634.6 0 0 6119 0 0 7520.5 0 0 6691.1 0 0 7697 0 0 7903.4 0 0 6307.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 12213000 0 12213000 0 NaN 1684 993 476 476 4516 4810;4811;4812 5125 5691 5125 5691 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9773 5125 5691 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9773 5125 5691 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9773 Q14157 992 Q14157 Q14157 Ubiquitin-associated protein 2-like UBAP2L sp|Q14157|UBP2L_HUMAN Ubiquitin-associated protein 2-like OS=Homo sapiens GN=UBAP2L PE=1 SV=2 0.999795 36.8789 0.00430862 98.04 47.236 98.04 1 S GVPDISGSVYSKTQQSFEKQGFHSGTPAASF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX TQQS(1)FEK T(-36.88)QQS(36.88)FEK 4 2 2.0716 32595 0 0 25587 0 0 32698 0 0 25057 0 0 27973 0 0 32218 0 0 28669 0 0 29571 0 0 23772 0 0 6562.8 0 0 30844 0 0 24168 0 0 32863 0 0 25875 0 0 28671 0 0 31953 0 0 29015 0 0 29962 0 0 23664 0 0 6864 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11007000 11007000 0 0 NaN 1685 993 992 992 4879 5204 5544 6162 5544 6162 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10335 5544 6162 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10335 5544 6162 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10335 Q14160 1348 Q14160 Q14160 Protein scribble homolog SCRIB sp|Q14160|SCRIB_HUMAN Protein scribble homolog OS=Homo sapiens GN=SCRIB PE=1 SV=4 0.997137 25.5604 4.19461E-08 156.49 142.15 117.42 1 S PEDAPAQPPTPGPAASPEQLSFRERQKYFEL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPXXXXXXXX AFAAVPTSHPPEDAPAQPPTPGPAAS(0.997)PEQLS(0.003)FR AFAAVPT(-83.8)S(-83.99)HPPEDAPAQPPT(-40.38)PGPAAS(25.56)PEQLS(-25.56)FR 26 5 0.056121 10575 0 0 10045 0 0 8977.7 0 0 9230.9 0 0 8641.6 0 0 11541 0 0 7601.3 0 0 8991.2 0 0 10643 0 0 22937 0 0 10001 0 0 9484.5 0 0 9125.8 0 0 9564.8 0 0 8777.5 0 0 11477 0 0 7870.7 0 0 9808.7 0 0 10372 0 0 21806 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 59137000 59137000 0 0 NaN 1686 994 1348 1348 172 180 193;194 218;219 194 219 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18460 193 218 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18445 193 218 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18445 Q14160 1486 Q14160 Q14160 Protein scribble homolog SCRIB sp|Q14160|SCRIB_HUMAN Protein scribble homolog OS=Homo sapiens GN=SCRIB PE=1 SV=4 1 49.1598 0.0530174 49.16 17.857 49.16 1 S LRVQSPEPPAPERALSPAELRALEAEKRALW X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX ALS(1)PAELR ALS(49.16)PAELR 3 2 -0.20997 13095 0 0 8680.3 0 0 14975 0 0 10713 0 0 9245.2 0 0 13647 0 0 7950.8 0 0 11399 0 0 10928 0 0 5139.8 0 0 12398 0 0 8211.5 0 0 14898 0 0 10922 0 0 9704.9 0 0 13529 0 0 8236.9 0 0 11676 0 0 10657 0 0 5103.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24330000 24330000 0 0 NaN 1687 994 1486 1486 314 335 358 398 358 398 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14175 358 398 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14175 358 398 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14175 Q14160 1566 Q14160 Q14160 Protein scribble homolog SCRIB sp|Q14160|SCRIB_HUMAN Protein scribble homolog OS=Homo sapiens GN=SCRIB PE=1 SV=4 0.676756 3.49595 8.08194E-26 264.24 249.05 181.39 1 S VEDLGPQTSTSPGRLSPDFAEELRSLEPSPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPXXXXXXX LAEAPSPAPTPSPTPVEDLGPQTS(0.001)T(0.019)S(0.303)PGRLS(0.677)PDFAEELR LAEAPS(-163.95)PAPT(-153.24)PS(-143.5)PT(-128.1)PVEDLGPQT(-38.79)S(-27.22)T(-15.45)S(-3.5)PGRLS(3.5)PDFAEELR 31 5 -0.02957 5405.5 0 0 6815.3 0 0 6768.7 0 0 5147.1 0 0 4786.1 0 0 6058.1 0 0 4091.1 0 0 7236.1 0 0 5637.2 0 0 37400 0 0 5120.1 0 0 6428.6 0 0 6711.7 0 0 5401.3 0 0 4965.7 0 0 6116.9 0 0 4240.1 0 0 8339.6 0 0 5496.6 0 0 35384 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 55401000 55401000 0 0 NaN 1688 994 1566 1566 2284 2413 2596;2597 2901;2902 2596 2901 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21237 2597 2902 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21268 2597 2902 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21268 Q14160 853 Q14160 Q14160 Protein scribble homolog SCRIB sp|Q14160|SCRIB_HUMAN Protein scribble homolog OS=Homo sapiens GN=SCRIB PE=1 SV=4 1 103.791 0.000159518 103.79 65.425 103.79 1 S ERRGGGLRLPLLPPESPGPLRQRHVACLARS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPXXXXXXXXXX LPLLPPES(1)PGPLR LPLLPPES(103.79)PGPLR 8 3 0.41983 2120.4 0 0 1946.7 0 0 1930.1 0 0 1914.6 0 0 1465.5 0 0 2012.5 0 0 1605 0 0 2061.2 0 0 2168.2 0 0 4717.8 0 0 2005.8 0 0 1838.8 0 0 1949 0 0 1969.4 0 0 1517.1 0 0 2022.3 0 0 1642.4 0 0 2207.8 0 0 2115.5 0 0 4490.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10756000 10756000 0 0 NaN 1689 994 853 853 2499 2638 2832 3160 2832 3160 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23107 2832 3160 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23107 2832 3160 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23107 Q14160 1475 Q14160 Q14160 Protein scribble homolog SCRIB sp|Q14160|SCRIB_HUMAN Protein scribble homolog OS=Homo sapiens GN=SCRIB PE=1 SV=4 1 175.003 3.90668E-08 175 145.47 175 1 S TAKAERRHQERLRVQSPEPPAPERALSPAEL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPXXXXXXX VQS(1)PEPPAPER VQS(175)PEPPAPER 3 2 -0.0037792 51978 0 0 25368 0 0 48891 0 0 24941 0 0 23664 0 0 49816 0 0 24121 0 0 32675 0 0 25291 0 0 13796 0 0 49173 0 0 23962 0 0 49100 0 0 26034 0 0 25512 0 0 48634 0 0 24563 0 0 33856 0 0 24905 0 0 13747 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 49478000 49478000 0 0 NaN 1690 994 1475 1475 2544;5230 2688;5575 2885;5943 3217;6607 5943 6607 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8796 5943 6607 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8796 5943 6607 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8796 Q14160 835 Q14160 Q14160 Protein scribble homolog SCRIB sp|Q14160|SCRIB_HUMAN Protein scribble homolog OS=Homo sapiens GN=SCRIB PE=1 SV=4 1 97.5324 6.39024E-17 224.91 200.01 224.91 1 S ENAVTITPLRPEDDYSPRERRGGGLRLPLLP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX MVEPENAVTITPLRPEDDYS(1)PR MVEPENAVT(-113.51)IT(-97.53)PLRPEDDY(-123.21)S(97.53)PR 20 3 -0.83069 7502.8 0 0 5969.4 0 0 7925.3 0 0 5798.1 0 0 3817.4 0 0 7321.4 0 0 4764.6 0 0 7367.1 0 0 6120.9 0 0 26192 0 0 7101.1 0 0 5638.1 0 0 7907.5 0 0 5988.2 0 0 4131.1 0 0 7320.5 0 0 4841.6 0 0 8177.2 0 0 5981.9 0 0 24834 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 31568000 31568000 0 0 NaN 1691 994 835 835 2758 2926 3136 3484 3136 3484 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18812 3136 3484 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18812 3136 3484 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18812 Q14160 1223 Q14160 Q14160 Protein scribble homolog SCRIB sp|Q14160|SCRIB_HUMAN Protein scribble homolog OS=Homo sapiens GN=SCRIB PE=1 SV=4 0.969267 14.9888 3.42042E-21 258.79 193.87 258.79 1 S ANPFAAGIGHRNSLESISSIDRELSPEGPGK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX NS(0.031)LES(0.969)ISSIDR NS(-14.99)LES(14.99)IS(-54.72)S(-82.21)IDR 5 2 0.83211 22808 0 0 16123 0 0 24724 0 0 17122 0 0 14202 0 0 26190 0 0 14981 0 0 17648 0 0 17460 0 0 8375.7 0 0 21589 0 0 15237 0 0 24658 0 0 17665 0 0 15047 0 0 25755 0 0 15280 0 0 18285 0 0 17123 0 0 8295.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 59836000 59836000 0 0 NaN 1692 994 1223 1223 2916 3090 3310 3670 3310 3670 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15145 3310 3670 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15145 3310 3670 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15145 Q14160 1448 Q14160 Q14160 Protein scribble homolog SCRIB sp|Q14160|SCRIB_HUMAN Protein scribble homolog OS=Homo sapiens GN=SCRIB PE=1 SV=4 0.735374 4.43876 2.04113E-05 135.39 93.509 135.39 1 S PPWASPSPTSRQSPASPPPLGGGAPVRTAKA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPXXXX QS(0.265)PAS(0.735)PPPLGGGAPVR QS(-4.44)PAS(4.44)PPPLGGGAPVR 5 2 0.15962 20742 0 0 7359.8 0 0 19113 0 0 8101.5 0 0 8266 0 0 19192 0 0 9323.4 0 0 12003 0 0 9172.7 0 0 8499.3 0 0 19621 0 0 6956.7 0 0 19208 0 0 8451.3 0 0 9043.6 0 0 18668 0 0 9435.5 0 0 12574 0 0 9057.1 0 0 8280.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 32082000 32082000 0 0 NaN 1693 994 1448 1448 3143 3334 3565 3953 3565 3953 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12591 3565 3953 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12591 3565 3953 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12591 Q14166 15 Q14166 Q14166 Tubulin--tyrosine ligase-like protein 12 TTLL12 sp|Q14166|TTL12_HUMAN Tubulin--tyrosine ligase-like protein 12 OS=Homo sapiens GN=TTLL12 PE=1 SV=2 0.5 0 1.22687E-68 431.48 402.14 431.48 1 S _MEAERGPERRPAERSSPGQTPEEGAQALAE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.5)S(0.5)PGQTPEEGAQALAEFAALHGPALR S(0)S(0)PGQT(-76.98)PEEGAQALAEFAALHGPALR 1 3 -0.033412 24502 0 0 31794 0 0 24309 0 0 30663 0 0 32784 0 0 22587 0 0 43342 0 0 32174 0 0 34256 0 0 30512 0 0 23185 0 0 30028 0 0 24613 0 0 31423 0 0 32909 0 0 23178 0 0 43362 0 0 32821 0 0 34186 0 0 29476 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 2529200000 2529200000 0 0 NaN 1694 995 15 15 4381 4668 4972 5517 4972 5517 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23157 4972 5517 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23157 4972 5517 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23157 Q14166 16 Q14166 Q14166 Tubulin--tyrosine ligase-like protein 12 TTLL12 sp|Q14166|TTL12_HUMAN Tubulin--tyrosine ligase-like protein 12 OS=Homo sapiens GN=TTLL12 PE=1 SV=2 0.5 0 1.22687E-68 431.48 402.14 431.48 1 S MEAERGPERRPAERSSPGQTPEEGAQALAEF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.5)S(0.5)PGQTPEEGAQALAEFAALHGPALR S(0)S(0)PGQT(-76.98)PEEGAQALAEFAALHGPALR 2 3 -0.033412 24502 0 0 31794 0 0 24309 0 0 30663 0 0 32784 0 0 22587 0 0 43342 0 0 32174 0 0 34256 0 0 30512 0 0 23185 0 0 30028 0 0 24613 0 0 31423 0 0 32909 0 0 23178 0 0 43362 0 0 32821 0 0 34186 0 0 29476 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 2529200000 2529200000 0 0 NaN 1695 995 16 16 4381 4668 4972 5517 4972 5517 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23157 4972 5517 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23157 4972 5517 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23157 Q14181 141 Q14181 Q14181 DNA polymerase alpha subunit B POLA2 sp|Q14181|DPOA2_HUMAN DNA polymerase alpha subunit B OS=Homo sapiens GN=POLA2 PE=1 SV=2 0.9998 36.9864 2.21507E-11 196.14 164.91 196.14 1 S STPETPLTKRSVSTRSPHQLLSPSSFSPSAT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(1)PHQLLSPSSFSPSATPSQK S(36.99)PHQLLS(-36.99)PS(-76.62)S(-94.29)FS(-142.14)PS(-163.79)AT(-173.21)PS(-182.52)QK 1 3 -0.25458 8856 0 0 9516.2 0 0 8721.4 0 0 9327.6 0 0 5526.6 0 0 10151 0 0 11940 0 0 15438 0 0 11713 0 0 21781 0 0 8379.5 0 0 8988.6 0 0 8762.6 0 0 9602.1 0 0 5887.5 0 0 10245 0 0 11839 0 0 15937 0 0 11566 0 0 20867 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16855000 16855000 0 0 NaN 1696 996 141 141 4118 4391 4682 5198 4682 5198 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17233 4682 5198 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17233 4682 5198 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17233 Q14186 23 Q14186 Q14186 Transcription factor Dp-1 TFDP1 sp|Q14186|TFDP1_HUMAN Transcription factor Dp-1 OS=Homo sapiens GN=TFDP1 PE=1 SV=1 1 102.727 0.000169659 102.73 71.499 102.73 1 S IEANGELKVFIDQNLSPGKGVVSLVAVHPST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX VFIDQNLS(1)PGK VFIDQNLS(102.73)PGK 8 3 0.12448 9062.7 0 0 6974.7 0 0 9198 0 0 6055.7 0 0 5794.5 0 0 9483.7 0 0 5676.1 0 0 6941.4 0 0 7935.8 0 0 5832.3 0 0 8576.1 0 0 6583.5 0 0 9212.2 0 0 6328.9 0 0 6081.7 0 0 9332.1 0 0 5845.4 0 0 7237 0 0 7734.4 0 0 5652.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23644000 23644000 0 0 NaN 1697 997 23 23 5105 5442 5796 6445 5796 6445 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19023 5796 6445 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19023 5796 6445 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19023 Q14188 42 Q14188 Q14188 Transcription factor Dp-2 TFDP2 sp|Q14188|TFDP2_HUMAN Transcription factor Dp-2 OS=Homo sapiens GN=TFDP2 PE=1 SV=2 0.953891 16.147 2.49271E-07 139.51 112.25 139.51 1 S KGNISFVAFPVSNTNSPTKILPKTLGPINVN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX GNISFVAFPVSNT(0.023)NS(0.954)PT(0.023)K GNIS(-116.18)FVAFPVS(-53.15)NT(-16.15)NS(16.15)PT(-16.19)K 15 3 -0.63606 5551.3 0 0 4561.5 0 0 5684.9 0 0 5140.3 0 0 5923 0 0 4645.3 0 0 6488 0 0 6373.7 0 0 4370.8 0 0 16463 0 0 5253.5 0 0 4312.4 0 0 5720.7 0 0 5234.6 0 0 6002.6 0 0 4731 0 0 6519.1 0 0 6822.4 0 0 4402.5 0 0 15650 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6885300 6885300 0 0 NaN 1698 998 42 42 1529 1610 1739 1932 1739 1932 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22001 1739 1932 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22001 1739 1932 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22001 Q14191 1133 Q14191 Q14191 Werner syndrome ATP-dependent helicase WRN sp|Q14191|WRN_HUMAN Werner syndrome ATP-dependent helicase OS=Homo sapiens GN=WRN PE=1 SV=2 0.999998 56.7376 0.000113799 132.9 73.704 132.9 1 S ISSGSNISKKSIMVQSPEKAYSSSQPVISAQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX SIMVQS(1)PEK S(-56.74)IMVQS(56.74)PEK 6 2 0.14496 22379 0 0 32399 0 0 22248 0 0 33467 0 0 22976 0 0 22516 0 0 24234 0 0 26697 0 0 37631 0 0 11971 0 0 21176 0 0 30612 0 0 22421 0 0 34122 0 0 23304 0 0 23133 0 0 24974 0 0 26977 0 0 36563 0 0 11890 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25269000 25269000 0 0 NaN 1699 999 1133 1133 3850 4103 4378 4869 4378 4869 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13990 4378 4869 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13990 4378 4869 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13990 Q14204 4368 Q14204 Q14204 Cytoplasmic dynein 1 heavy chain 1 DYNC1H1 sp|Q14204|DYHC1_HUMAN Cytoplasmic dynein 1 heavy chain 1 OS=Homo sapiens GN=DYNC1H1 PE=1 SV=5 0.493654 0 8.95831E-07 142.08 111.47 142.08 S DDLAYAETEKKTRTDSTSDGRPAWMRTLHTT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX TDS(0.494)T(0.494)S(0.013)DGRPAWMR T(-43.91)DS(0)T(0)S(-15.91)DGRPAWMR 3 2 3.7272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1700 1001 4368 4368 4670 4981 5305 5894 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12593 5305 5894 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12593 5305 5894 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12593 Q14207 1296 Q14207 Q14207 Protein NPAT NPAT sp|Q14207|NPAT_HUMAN Protein NPAT OS=Homo sapiens GN=NPAT PE=1 SV=3 0.992237 21.2329 3.4177E-06 147.73 124.3 147.73 1 S EEPIDIIKAPSSRRFSEDSSTSKVMVPPVTP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX RFS(0.992)EDS(0.007)STSK RFS(21.23)EDS(-21.23)S(-35.71)T(-46.18)S(-56.61)K 3 2 0.50818 13995 0 0 9930.8 0 0 13956 0 0 10113 0 0 19933 0 0 14275 0 0 21159 0 0 15362 0 0 10155 0 0 3506.6 0 0 13242 0 0 9382.3 0 0 14131 0 0 10440 0 0 19882 0 0 14143 0 0 21177 0 0 15472 0 0 10486 0 0 3657.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11488000 11488000 0 0 NaN 1701 1002 1296 1296 3231 3427 3662 4062 3662 4062 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8567 3662 4062 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8567 3662 4062 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8567 Q14241 151 Q14241 Q14241 Transcription elongation factor B polypeptide 3 TCEB3 sp|Q14241|ELOA1_HUMAN Transcription elongation factor B polypeptide 3 OS=Homo sapiens GN=TCEB3 PE=1 SV=2 0.979799 16.8629 0.00237471 101.43 42.513 101.43 1 S GDYQETWKATGSRSYSPDHRQKKHRKLSELE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX S(0.02)YS(0.98)PDHR S(-16.86)Y(-45.99)S(16.86)PDHR 3 2 0.2392 4256.3 0 0 5943.6 0 0 4737.8 0 0 5403 0 0 5507.7 0 0 5026.2 0 0 4998.1 0 0 5342.4 0 0 6129.6 0 0 3585.2 0 0 4029.3 0 0 5611.6 0 0 4751.5 0 0 5574.6 0 0 5537.6 0 0 5065.5 0 0 5143.1 0 0 5454.6 0 0 6000.1 0 0 3499.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5600000 5600000 0 0 NaN 1702 1003 151 151 4601 4907 5227 5805 5227 5805 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5590 5227 5805 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5590 5227 5805 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5590 Q14247 405 Q14247 Q14247 Src substrate cortactin CTTN sp|Q14247|SRC8_HUMAN Src substrate cortactin OS=Homo sapiens GN=CTTN PE=1 SV=2 0.998149 27.6262 8.92183E-05 120.75 112.15 120.75 2 S KLEEQARAKTQTPPVSPAPQPTEERLPSSPV X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X XXXXXXXPPPPPPPPPPPPPPPPPPXXXXXX AKT(0.635)QT(0.365)PPVS(0.998)PAPQPT(0.002)EER AKT(2.41)QT(-2.41)PPVS(27.63)PAPQPT(-27.63)EER 9 3 0.30547 0 10324 0 0 25704 0 0 10761 0 0 25069 0 0 6449.9 0 0 10658 0 0 5596.9 0 0 16591 0 0 29308 0 0 5488.8 0 0 9771.2 0 0 24278 0 0 10756 0 0 25547 0 0 6810.3 0 0 11411 0 0 6387.5 0 0 16577 0 0 27912 0 0 5552.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 40494000 0 40494000 0 NaN 1703 1004 405 405 281;4889;4890 302;5214;5215 323 361 323 361 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9313 323 361 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9313 323 361 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9313 Q14247 417 Q14247 Q14247 Src substrate cortactin CTTN sp|Q14247|SRC8_HUMAN Src substrate cortactin OS=Homo sapiens GN=CTTN PE=1 SV=2 0.496261 0 1.67826E-07 147.36 130.56 147.36 S PPVSPAPQPTEERLPSSPVYEDAASFKAELS X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPXXXX TQTPPVSPAPQPT(0.007)EERLPS(0.496)S(0.496)PVYEDAASFK T(-109.53)QT(-105.32)PPVS(-95.7)PAPQPT(-18.23)EERLPS(0)S(0)PVY(-43.24)EDAAS(-53.01)FK 19 4 -0.47506 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1704 1004 417 417 2512;4890 2653;5215 5555 6175 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18383 5555 6175 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18383 5555 6175 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18383 Q14247 418 Q14247 Q14247 Src substrate cortactin CTTN sp|Q14247|SRC8_HUMAN Src substrate cortactin OS=Homo sapiens GN=CTTN PE=1 SV=2 0.891935 9.16649 6.7312E-16 226.65 206.26 226.65 1 S PVSPAPQPTEERLPSSPVYEDAASFKAELSY X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX LPS(0.108)S(0.892)PVYEDAASFK LPS(-9.17)S(9.17)PVY(-117.2)EDAAS(-183.7)FK 4 3 0.11342 9753.2 0 0 27543 0 0 8634.2 0 0 26062 0 0 3437.6 0 0 7686.1 0 0 4289.5 0 0 13286 0 0 28239 0 0 7884.3 0 0 9224.8 0 0 26011 0 0 8696.5 0 0 26555 0 0 3830 0 0 8609.5 0 0 4981.3 0 0 13347 0 0 26848 0 0 7731.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 134420000 134420000 0 0 NaN 1705 1004 418 418 2512;4890 2653;5215 2849 3178 2849 3178 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20204 2849 3178 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20204 2849 3178 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20204 Q14258 100 Q14258 Q14258 E3 ubiquitin/ISG15 ligase TRIM25 TRIM25 sp|Q14258|TRI25_HUMAN E3 ubiquitin/ISG15 ligase TRIM25 OS=Homo sapiens GN=TRIM25 PE=1 SV=2 0.976733 16.2304 0.0113695 70.453 47.006 70.453 1 S PPADVWTPPARASAPSPNAQVACDHCLKEAA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPXXX AS(0.023)APS(0.977)PNAQVACDHCLK AS(-16.23)APS(16.23)PNAQVACDHCLK 5 3 -0.37695 28024 0 0 19818 0 0 30320 0 0 23983 0 0 17825 0 0 30120 0 0 19268 0 0 24840 0 0 23336 0 0 31079 0 0 26526 0 0 18745 0 0 30249 0 0 24470 0 0 18851 0 0 29909 0 0 19655 0 0 26058 0 0 22853 0 0 29839 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 146190000 146190000 0 0 NaN 1706 1005 100 100 435 464 499 559 499 559 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11139 499 559 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11139 499 559 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11139 Q14289 375 Q14289 Q14289 Protein-tyrosine kinase 2-beta PTK2B sp|Q14289|FAK2_HUMAN Protein-tyrosine kinase 2-beta OS=Homo sapiens GN=PTK2B PE=1 SV=2 1 153.145 5.72322E-07 153.14 124.51 153.14 1 S GSLIIHPRKDGEKRNSLPQIPMLNLEARRSH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX RNS(1)LPQIPMLNLEAR RNS(153.14)LPQIPMLNLEAR 3 3 -0.0071215 35248 0 0 25222 0 0 38029 0 0 24884 0 0 26082 0 0 37311 0 0 28383 0 0 32724 0 0 26361 0 0 76672 0 0 33364 0 0 23825 0 0 37991 0 0 25771 0 0 27204 0 0 36931 0 0 28726 0 0 35312 0 0 26096 0 0 72953 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 133370000 133370000 0 0 NaN 1707 1006 375 375 3362 3565;3566 3803;3804;3805 4221;4222;4223;4224 3805 4223 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21705 3805 4223 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21705 3805 4223 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21705 Q14289 396 Q14289 Q14289 Protein-tyrosine kinase 2-beta PTK2B sp|Q14289|FAK2_HUMAN Protein-tyrosine kinase 2-beta OS=Homo sapiens GN=PTK2B PE=1 SV=2 0.988066 19.2409 1.00669E-17 226.18 209.68 226.18 1 S MLNLEARRSHLSESCSIESDIYAEIPDETLR Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPPP SHLSES(0.012)CS(0.988)IESDIYAEIPDETLR S(-53.86)HLS(-37.88)ES(-19.24)CS(19.24)IES(-57.63)DIY(-119.32)AEIPDET(-194.69)LR 8 3 0.85573 1935.3 0 0 2887.1 0 0 2667.8 0 0 3794.8 0 0 4343.3 0 0 3579.6 0 0 3941.3 0 0 6660.1 0 0 3880.5 0 0 86574 0 0 1834.1 0 0 2732.5 0 0 2664 0 0 3837.6 0 0 4302.9 0 0 3799.2 0 0 4029.5 0 0 9169.8 0 0 3831.5 0 0 81674 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 32987000 32987000 0 0 NaN 1708 1006 396 396 3833 4086 4360 4848 4360 4848 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21385 4360 4848 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21385 4360 4848 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21385 Q14315 2233 Q14315 Q14315 Filamin-C FLNC sp|Q14315|FLNC_HUMAN Filamin-C OS=Homo sapiens GN=FLNC PE=1 SV=3 0.999741 35.8757 3.30302E-06 162.21 121.21 162.21 1 S FPAVFGDFLGRERLGSFGSITRQQEGEASSQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX LGS(1)FGSITR LGS(35.88)FGS(-35.88)IT(-68.76)R 3 2 0.095774 11451 0 0 60007 0 0 10633 0 0 60500 0 0 4230.7 0 0 11422 0 0 3231.6 0 0 26795 0 0 63664 0 0 3792.9 0 0 10833 0 0 56690 0 0 10673 0 0 61301 0 0 4714.2 0 0 13839 0 0 4992.4 0 0 26396 0 0 60254 0 0 4191.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 162500000 162500000 0 0 NaN 1709 1007 2233 2233 2381 2518 2711 3029 2711 3029 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18251 2711 3029 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18251 2711 3029 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18251 Q14315 2236 Q14315 Q14315 Filamin-C FLNC sp|Q14315|FLNC_HUMAN Filamin-C OS=Homo sapiens GN=FLNC PE=1 SV=3 0.918427 10.9515 0.0399772 54.259 30.94 54.259 1 S VFGDFLGRERLGSFGSITRQQEGEASSQDMT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX LGS(0.074)FGS(0.918)IT(0.008)R LGS(-10.95)FGS(10.95)IT(-20.71)R 6 2 -1.8902 6084.6 0 0 18948 0 0 7516 0 0 19298 0 0 6582.7 0 0 5000.2 0 0 5226.5 0 0 11644 0 0 20665 0 0 4285.8 0 0 5763 0 0 17902 0 0 7471.9 0 0 19564 0 0 6730.7 0 0 5741.5 0 0 5808 0 0 11552 0 0 19735 0 0 4305 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11904000 11904000 0 0 NaN 1710 1007 2236 2236 2381 2518 2710 3028 2710 3028 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17707 2710 3028 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17707 2710 3028 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17707 Q14493 23 Q14493 Q14493 Histone RNA hairpin-binding protein SLBP sp|Q14493|SLBP_HUMAN Histone RNA hairpin-binding protein OS=Homo sapiens GN=SLBP PE=1 SV=1 0.999993 51.7995 2.39505E-07 162.72 154.5 162.72 1 S PPRHQSRCDGDASPPSPARWSLGRKRRADGR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPXXXXXXXXXXXX CDGDASPPS(1)PAR CDGDAS(-51.8)PPS(51.8)PAR 9 2 -1.4958 10395 0 0 6752 0 0 10644 0 0 7484.1 0 0 6595.8 0 0 10152 0 0 5430.2 0 0 7352.4 0 0 7637.8 0 0 3680.1 0 0 9836.9 0 0 6382.5 0 0 10651 0 0 7682.6 0 0 6918 0 0 10028 0 0 5643.9 0 0 7594.4 0 0 7442.6 0 0 3635.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7979400 7979400 0 0 NaN 1711 1008 23 23 598 637 679 754 679 754 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6602 679 754 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6602 679 754 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6602 Q14498 136 Q14498 Q14498 RNA-binding protein 39 RBM39 sp|Q14498|RBM39_HUMAN RNA-binding protein 39 OS=Homo sapiens GN=RBM39 PE=1 SV=2 1 91.8907 1.01072E-10 194.04 172.75 194.04 1 S SRRRSRSKSPFRKDKSPVREPIDNLTPEERD X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX DKS(1)PVREPIDNLTPEER DKS(91.89)PVREPIDNLT(-91.89)PEER 3 3 0.10359 22081 0 0 25270 0 0 24880 0 0 27690 0 0 24541 0 0 24387 0 0 26412 0 0 28654 0 0 27924 0 0 25297 0 0 20905 0 0 23886 0 0 24892 0 0 28231 0 0 24953 0 0 24693 0 0 26837 0 0 29339 0 0 27488 0 0 24483 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 494490000 494490000 0 0 NaN 1712 1009 136 136 722 766 817 903 817 903 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13016 817 903 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13016 817 903 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13016 Q14498 117 Q14498 Q14498 RNA-binding protein 39 RBM39 sp|Q14498|RBM39_HUMAN RNA-binding protein 39 OS=Homo sapiens GN=RBM39 PE=1 SV=2 1 115.175 0.000601929 115.18 78.842 115.18 1 S PKFNSAIRGKIGLPHSIKLSRRRSRSKSPFR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X XXXXXXXXXXPPPPPPPPXXXXXXXXXXXXX IGLPHS(1)IK IGLPHS(115.18)IK 6 3 -0.14995 24827 0 0 3871.6 0 0 22919 0 0 4371.5 0 0 5380.7 0 0 24248 0 0 4728.8 0 0 11488 0 0 4310.2 0 0 3603.3 0 0 23485 0 0 3660.2 0 0 22972 0 0 4777.4 0 0 6486.2 0 0 23264 0 0 4833.4 0 0 12126 0 0 4270.6 0 0 3658.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 46589000 46589000 0 0 NaN 1713 1009 117 117 1840 1943 2099 2353 2099 2353 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16045 2099 2353 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16045 2099 2353 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16045 Q14498 127 Q14498 Q14498 RNA-binding protein 39 RBM39 sp|Q14498|RBM39_HUMAN RNA-binding protein 39 OS=Homo sapiens GN=RBM39 PE=1 SV=2 1 80.706 0.0104456 80.706 50.939 80.706 2 S IGLPHSIKLSRRRSRSKSPFRKDKSPVREPI X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX S(1)KS(1)PFRK S(80.71)KS(80.71)PFRK 1 3 0.034577 0 64575 0 0 71270 0 0 63641 0 0 77236 0 0 58168 0 0 64626 0 0 57302 0 0 63435 0 0 81654 0 0 5294.2 0 0 61101 0 0 67361 0 0 64068 0 0 78737 0 0 59363 0 0 65336 0 0 59037 0 0 63836 0 0 79536 0 0 6453.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 529850000 0 529850000 0 NaN 1714 1009 127 127 3904 4161 4441 4936 4441 4936 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10930 4441 4936 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10930 4441 4936 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10930 Q14498 129 Q14498 Q14498 RNA-binding protein 39 RBM39 sp|Q14498|RBM39_HUMAN RNA-binding protein 39 OS=Homo sapiens GN=RBM39 PE=1 SV=2 1 80.706 0.0104456 80.706 50.939 80.706 2 S LPHSIKLSRRRSRSKSPFRKDKSPVREPIDN X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX S(1)KS(1)PFRK S(80.71)KS(80.71)PFRK 3 3 0.034577 0 64575 0 0 71270 0 0 63641 0 0 77236 0 0 58168 0 0 64626 0 0 57302 0 0 63435 0 0 81654 0 0 5294.2 0 0 61101 0 0 67361 0 0 64068 0 0 78737 0 0 59363 0 0 65336 0 0 59037 0 0 63836 0 0 79536 0 0 6453.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 529850000 0 529850000 0 NaN 1715 1009 129 129 3904 4161 4441 4936 4441 4936 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10930 4441 4936 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10930 4441 4936 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10930 Q14498 97 Q14498 Q14498 RNA-binding protein 39 RBM39 sp|Q14498|RBM39_HUMAN RNA-binding protein 39 OS=Homo sapiens GN=RBM39 PE=1 SV=2 0.811439 6.3624 0.00025105 115.78 85.527 115.78 1 S SRSRSRDRRFRGRYRSPYSGPKFNSAIRGKI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX Y(0.188)RS(0.811)PY(0.001)SGPK Y(-6.36)RS(6.36)PY(-28.88)S(-51.68)GPK 3 3 -0.14905 25372 0 0 31067 0 0 27216 0 0 29232 0 0 24987 0 0 28021 0 0 27826 0 0 26707 0 0 31741 0 0 3266.9 0 0 24015 0 0 29338 0 0 27277 0 0 30107 0 0 25532 0 0 28131 0 0 28295 0 0 26938 0 0 31153 0 0 3694.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1455700000 1455700000 0 0 NaN 1716 1009 97 97 5420 5773 6163 6858 6163 6858 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9462 6163 6858 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9462 6163 6858 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9462 Q14562 460 Q14562 Q14562 ATP-dependent RNA helicase DHX8 DHX8 sp|Q14562|DHX8_HUMAN ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1 0.999979 46.7704 0.0056906 83.617 58.4 83.617 1 S EPPFLRGHTKQSMDMSPIKIVKNPDGSLSQA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX QSMDMS(1)PIK QS(-46.77)MDMS(46.77)PIK 6 3 -0.33869 14040 0 0 13645 0 0 13603 0 0 14049 0 0 12202 0 0 14948 0 0 13142 0 0 14342 0 0 14590 0 0 4395 0 0 13284 0 0 12892 0 0 13707 0 0 14415 0 0 12480 0 0 14944 0 0 13372 0 0 14542 0 0 14335 0 0 4470.3 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 9525300 9525300 0 0 NaN 1717 1010 460 460 3141 3332 3563 3950;3951 3563 3950 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15242 3563 3950 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15242 3563 3950 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15242 Q14566 13 Q14566 Q14566 DNA replication licensing factor MCM6 MCM6 sp|Q14566|MCM6_HUMAN DNA replication licensing factor MCM6 OS=Homo sapiens GN=MCM6 PE=1 SV=1 1 144.551 2.74379E-12 144.55 115.28 144.55 1 S ___MDLAAAAEPGAGSQHLEVRDEVAEKCQK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPPPPPXXX MDLAAAAEPGAGS(1)QHLEVRDEVAEK MDLAAAAEPGAGS(144.55)QHLEVRDEVAEK 13 3 -0.29781 10385 0 0 9713 0 0 9690.4 0 0 10400 0 0 7849.6 0 0 9828.2 0 0 9451.4 0 0 9116.4 0 0 10721 0 0 32160 0 0 9824.1 0 0 9179.4 0 0 9778.1 0 0 10627 0 0 8098.3 0 0 9928.5 0 0 9578.6 0 0 10141 0 0 10525 0 0 30494 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 18301000 18301000 0 0 NaN 1718 1011 13 13 2670;2671 2821;2822 3026;3027 3371;3372 3027 3372 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17968 3027 3372 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17968 3027 3372 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17968 Q14643 1598 Q14643 Q14643 Inositol 1,4,5-trisphosphate receptor type 1 ITPR1 sp|Q14643|ITPR1_HUMAN Inositol 1,4,5-trisphosphate receptor type 1 OS=Homo sapiens GN=ITPR1 PE=1 SV=3 1 68.5856 0.000542704 121.45 84.467 121.45 1 S AMNWRLSARNAARRDSVLAASRDYRNIIERL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX RDS(1)VLAASR RDS(68.59)VLAAS(-68.59)R 3 3 -0.59423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1719 1012 1598 1598 3217 3411 3645 4042 3645 4042 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7465 3645 4042 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7465 3645 4042 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7465 Q14644 809 Q14644 Q14644 Ras GTPase-activating protein 3 RASA3 sp|Q14644|RASA3_HUMAN Ras GTPase-activating protein 3 OS=Homo sapiens GN=RASA3 PE=1 SV=3 0.999726 35.6276 0.00220005 94.922 73.049 94.922 1 S HAQYKRDKFKKTKYGSQEHPIGDKSFQNYIR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX YGS(1)QEHPIGDK Y(-35.63)GS(35.63)QEHPIGDK 3 3 0.34815 24297 0 0 12997 0 0 25372 0 0 13921 0 0 15867 0 0 25998 0 0 16456 0 0 17428 0 0 13398 0 0 2803.3 0 0 22995 0 0 12283 0 0 25371 0 0 14431 0 0 16669 0 0 25418 0 0 16639 0 0 17899 0 0 13349 0 0 3043 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26541000 26541000 0 0 NaN 1720 1013 809 809 5385 5737 6120 6805 6120 6805 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10059 6120 6805 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10059 6120 6805 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10059 Q14669 1427 Q14669 Q14669 E3 ubiquitin-protein ligase TRIP12 TRIP12 sp|Q14669|TRIPC_HUMAN E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens GN=TRIP12 PE=1 SV=1 0.998035 27.2963 0.00129012 97.767 54.736 97.767 1 S VGGKRGRAQTAPTKTSPRNAKKHDELWHDGV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX AQTAPTKT(0.002)S(0.998)PR AQT(-53.63)APT(-39.97)KT(-27.3)S(27.3)PR 9 3 -0.66353 51883 0 0 28918 0 0 45200 0 0 25114 0 0 40929 0 0 49762 0 0 38369 0 0 40332 0 0 26836 0 0 3344 0 0 49069 0 0 27296 0 0 45841 0 0 26414 0 0 41740 0 0 48667 0 0 38863 0 0 40923 0 0 26969 0 0 4082.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 140450000 140450000 0 0 NaN 1721 1014 1427 1427 408 436 471 525 471 525 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6541 471 525 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6541 471 525 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6541 Q14669 340 Q14669 Q14669 E3 ubiquitin-protein ligase TRIP12 TRIP12 sp|Q14669|TRIPC_HUMAN E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens GN=TRIP12 PE=1 SV=1 1 62.6328 0.0186589 62.633 27.83 62.633 1 S RQKTTGSCASTSRRGSGLGKRGAAEARRQEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX RGS(1)GLGK RGS(62.63)GLGK 3 3 -0.093902 28688 0 0 10026 0 0 28476 0 0 10531 0 0 33464 0 0 29667 0 0 32156 0 0 24010 0 0 11224 0 0 2564.6 0 0 27146 0 0 9474.4 0 0 28744 0 0 11089 0 0 33627 0 0 28817 0 0 32222 0 0 24381 0 0 11963 0 0 2970.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11506000 11506000 0 0 NaN 1722 1014 340 340 3252 3449 3685 4088 3685 4088 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7257 3685 4088 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7257 3685 4088 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7257 Q14669 312 Q14669 Q14669 E3 ubiquitin-protein ligase TRIP12 TRIP12 sp|Q14669|TRIPC_HUMAN E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens GN=TRIP12 PE=1 SV=1 0.999077 30.3426 1.59346E-22 251.87 201.51 251.87 1 S AKLASLRKSTKKRSESPPAELPSLRRSTRQK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX S(0.001)ES(0.999)PPAELPSLR S(-30.34)ES(30.34)PPAELPS(-96.62)LR 3 2 0.59658 32631 0 0 22540 0 0 36093 0 0 23143 0 0 30514 0 0 33865 0 0 31960 0 0 29395 0 0 24183 0 0 16232 0 0 30890 0 0 21296 0 0 36079 0 0 23898 0 0 31308 0 0 33440 0 0 32250 0 0 30147 0 0 24191 0 0 15965 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 84675000 84675000 0 0 NaN 1723 1014 312 312 3470;3712 3686;3947 3932;4207 4367;4674 4207 4674 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15821 4207 4674 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15821 4207 4674 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15821 Q14669 85 Q14669 Q14669 E3 ubiquitin-protein ligase TRIP12 TRIP12 sp|Q14669|TRIPC_HUMAN E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens GN=TRIP12 PE=1 SV=1 0.937863 12.1794 0.00438919 96.24 15.534 96.24 1 S RGVKRSASPDYNRTNSPSSAKKPKALQHTES X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX T(0.002)NS(0.938)PS(0.057)S(0.004)AK T(-27.7)NS(12.18)PS(-12.18)S(-23.96)AK 3 2 -1.8262 22822 0 0 14239 0 0 24706 0 0 12271 0 0 14965 0 0 24981 0 0 15421 0 0 17206 0 0 14082 0 0 3781.1 0 0 21602 0 0 13440 0 0 24651 0 0 12924 0 0 15767 0 0 24382 0 0 15639 0 0 17674 0 0 13951 0 0 3958.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9655700 9655700 0 0 NaN 1724 1014 85 85 4816 5138 5477 6095 5477 6095 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6469 5477 6095 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6469 5477 6095 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6469 Q14669 1016 Q14669 Q14669 E3 ubiquitin-protein ligase TRIP12 TRIP12 sp|Q14669|TRIPC_HUMAN E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens GN=TRIP12 PE=1 SV=1 0.966673 14.6249 0.0053085 87.208 66.394 87.208 1 S KRKRLPKRGPRRPKYSPPRDDDKVDNQAKSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPXX Y(0.033)S(0.967)PPRDDDKVDNQAK Y(-14.62)S(14.62)PPRDDDKVDNQAK 2 4 -0.072262 13307 0 0 9895.8 0 0 15367 0 0 10519 0 0 14824 0 0 15089 0 0 16808 0 0 14701 0 0 11587 0 0 2580 0 0 12599 0 0 9351.8 0 0 15352 0 0 10836 0 0 15099 0 0 14921 0 0 16871 0 0 14839 0 0 11654 0 0 2769.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16974000 16974000 0 0 NaN 1725 1014 1016 1016 5433 5786 6177 6874 6177 6874 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10380 6177 6874 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10380 6177 6874 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10380 Q14671 709 Q14671 Q14671 Pumilio homolog 1 PUM1 sp|Q14671|PUM1_HUMAN Pumilio homolog 1 OS=Homo sapiens GN=PUM1 PE=1 SV=3 0.999938 42.0855 9.8388E-06 136.7 90.377 136.7 1 S TAVANSNTGSGSRRDSLTGSSDLYKRTSSSL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX RDS(1)LTGSSDLYK RDS(42.09)LT(-42.09)GS(-72.19)S(-84.35)DLY(-116.03)K 3 3 0.87134 58889 0 0 60581 0 0 57063 0 0 59450 0 0 67982 0 0 62000 0 0 85823 0 0 67637 0 0 60819 0 0 19753 0 0 55717 0 0 57222 0 0 57732 0 0 61152 0 0 68572 0 0 62140 0 0 85819 0 0 68222 0 0 61071 0 0 20166 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 136530000 136530000 0 0 NaN 1726 1015 709 709 3211;3212 3405;3406 3639;3640 4035;4036 3639 4035 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12983 3639 4035 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12983 3639 4035 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12983 Q14676 793 Q14676 Q14676 Mediator of DNA damage checkpoint protein 1 MDC1 sp|Q14676|MDC1_HUMAN Mediator of DNA damage checkpoint protein 1 OS=Homo sapiens GN=MDC1 PE=1 SV=3 0.999208 31.0074 1.37668E-17 245.2 217.81 245.2 1 S CLSPPRAIPGDQHPESPVHTEPMGIQGRGRQ X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPPPXXX AIPGDQHPES(0.999)PVHT(0.001)EPMGIQGR AIPGDQHPES(31.01)PVHT(-31.01)EPMGIQGR 10 3 -0.021947 41971 0 0 37493 0 0 45341 0 0 39400 0 0 32599 0 0 44014 0 0 36468 0 0 39547 0 0 41605 0 0 23083 0 0 39728 0 0 35429 0 0 45313 0 0 40412 0 0 33894 0 0 43899 0 0 37076 0 0 40537 0 0 40834 0 0 22650 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 77379000 77379000 0 0 NaN 1727 1016 793 793 256 274;275 295;296 328;329;330 296 329 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12064 296 329 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12064 296 329 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12064 Q14676 780 Q14676 Q14676 Mediator of DNA damage checkpoint protein 1 MDC1 sp|Q14676|MDC1_HUMAN Mediator of DNA damage checkpoint protein 1 OS=Homo sapiens GN=MDC1 PE=1 SV=3 1 89.56 5.3015E-18 237.01 212.61 237.01 1 S TQPFDTHLEAYGPCLSPPRAIPGDQHPESPV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX ESEDSETQPFDTHLEAYGPCLS(1)PPR ES(-175.28)EDS(-160.18)ET(-136.78)QPFDT(-96.27)HLEAY(-89.56)GPCLS(89.56)PPR 22 3 0.30967 4763.2 0 0 2772 0 0 4429.9 0 0 2749.7 0 0 3018.9 0 0 5497.1 0 0 2426.9 0 0 4388.9 0 0 4071 0 0 28259 0 0 4506 0 0 2618.5 0 0 4461.4 0 0 2868.8 0 0 3140 0 0 5426.7 0 0 2543.8 0 0 5296.9 0 0 3947.1 0 0 26711 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18865000 18865000 0 0 NaN 1728 1016 780 780 1146 1206 1298 1429 1298 1429 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18407 1298 1429 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18407 1298 1429 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18407 Q14676 168 Q14676 Q14676 Mediator of DNA damage checkpoint protein 1 MDC1 sp|Q14676|MDC1_HUMAN Mediator of DNA damage checkpoint protein 1 OS=Homo sapiens GN=MDC1 PE=1 SV=3 0.999999 62.2515 1.3422E-15 216.72 174.75 216.72 1 S VQGETQPQRLLLAEDSEEEVDFLSERRMVKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPXXXXX LLLAEDS(1)EEEVDFLSER LLLAEDS(62.25)EEEVDFLS(-62.25)ER 7 2 0.33685 11593 0 0 11322 0 0 12985 0 0 11162 0 0 9208 0 0 10767 0 0 9313.8 0 0 10790 0 0 12473 0 0 163230 0 0 10975 0 0 10695 0 0 12949 0 0 11464 0 0 9571.8 0 0 11118 0 0 9562.1 0 0 15741 0 0 12173 0 0 153950 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 50354000 50354000 0 0 NaN 1729 1016 168 168 2439 2577 2771 3094 2771 3094 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23686 2771 3094 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23686 2771 3094 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23686 Q14676 1399 Q14676 Q14676 Mediator of DNA damage checkpoint protein 1 MDC1 sp|Q14676|MDC1_HUMAN Mediator of DNA damage checkpoint protein 1 OS=Homo sapiens GN=MDC1 PE=1 SV=3 0.798088 6.23839 0.00602809 84.946 67.727 84.946 1 S TPEPTSRATRGRKNRSSGKTPETLVPTAPKL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPX S(0.798)S(0.19)GKT(0.012)PETLVPTAPK S(6.24)S(-6.24)GKT(-18.31)PET(-33.38)LVPT(-52.24)APK 1 3 -0.42065 12051 0 0 14925 0 0 10836 0 0 14227 0 0 15432 0 0 10794 0 0 15600 0 0 13825 0 0 14753 0 0 9615.6 0 0 11399 0 0 14095 0 0 11038 0 0 14596 0 0 15391 0 0 11029 0 0 15848 0 0 14040 0 0 14593 0 0 9374.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11056000 11056000 0 0 NaN 1730 1016 1399 1399 2907;4347 3081;4633 4936 5480 4936 5480 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15376 4936 5480 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15376 4936 5480 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15376 Q14676 882 Q14676 Q14676 Mediator of DNA damage checkpoint protein 1 MDC1 sp|Q14676|MDC1_HUMAN Mediator of DNA damage checkpoint protein 1 OS=Homo sapiens GN=MDC1 PE=1 SV=3 0.810929 6.32371 0.00380481 95.195 79.253 95.195 1 S RDTQRQESDKNGESASPERDRESLKVEIETS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPXXXXXXXXXX QESDKNGES(0.189)AS(0.811)PERDR QES(-51.83)DKNGES(-6.32)AS(6.32)PERDR 11 3 0.46368 6863.3 0 0 5073.2 0 0 6311.2 0 0 4843.9 0 0 3763 0 0 5770.7 0 0 4990.3 0 0 5421.3 0 0 4995.8 0 0 1287.3 0 0 6492.3 0 0 4791.1 0 0 6357.9 0 0 5002.5 0 0 3986.6 0 0 5740.9 0 0 5020.9 0 0 5490.3 0 0 4929.1 0 0 1337.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8274200 8274200 0 0 NaN 1731 1016 882 882 3024 3205 3428 3801 3428 3801 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5481 3428 3801 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5481 3428 3801 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5481 Q14676 1153 Q14676 Q14676 Mediator of DNA damage checkpoint protein 1 MDC1 sp|Q14676|MDC1_HUMAN Mediator of DNA damage checkpoint protein 1 OS=Homo sapiens GN=MDC1 PE=1 SV=3 0.386295 0 4.56624E-18 214.9 203.97 214.9 S TPKPTSQATRSRTNRSSVKTPEPVVPTAPEL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.386)S(0.386)VKT(0.207)PEPVVPT(0.021)APELQPSTSTDQPVTSEPTSQVTR S(0)S(0)VKT(-2.72)PEPVVPT(-12.69)APELQPS(-104.13)T(-109.87)S(-115.55)T(-121.15)DQPVT(-173.69)S(-178.21)EPT(-189.41)S(-192.33)QVT(-197.33)R 1 4 -0.97558 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1732 1016 1153 1153 4489;4811 4781;5132 5091 5650 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16703 5091 5650 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16703 5091 5650 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16703 Q14676 1154 Q14676 Q14676 Mediator of DNA damage checkpoint protein 1 MDC1 sp|Q14676|MDC1_HUMAN Mediator of DNA damage checkpoint protein 1 OS=Homo sapiens GN=MDC1 PE=1 SV=3 0.972008 15.4331 4.56624E-18 214.9 203.97 93.096 1 S PKPTSQATRSRTNRSSVKTPEPVVPTAPELQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX TNRS(0.028)S(0.972)VK T(-37.53)NRS(-15.43)S(15.43)VK 5 3 -0.04214 16902 0 0 17407 0 0 19046 0 0 18590 0 0 20174 0 0 19660 0 0 23760 0 0 18831 0 0 19001 0 0 2450.7 0 0 16002 0 0 16450 0 0 19075 0 0 19032 0 0 20452 0 0 19653 0 0 23883 0 0 18995 0 0 18950 0 0 2743.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15627000 15627000 0 0 NaN 1733 1016 1154 1154 4489;4811 4781;5132 5471 6089 5471 6089 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5715 5091 5650 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16703 5091 5650 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16703 Q14676 1563 Q14676 Q14676 Mediator of DNA damage checkpoint protein 1 MDC1 sp|Q14676|MDC1_HUMAN Mediator of DNA damage checkpoint protein 1 OS=Homo sapiens GN=MDC1 PE=1 SV=3 0.499656 0 6.6566E-06 135.1 120.76 135.1 S TPEPTSRATRGRTNRSSVKTPESIVPIAPEL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.5)S(0.5)VKT(0.001)PESIVPIAPELQPSTSR S(0)S(0)VKT(-28.66)PES(-48.12)IVPIAPELQPS(-126.48)T(-126.48)S(-126.48)R 1 3 -0.14632 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1734 1016 1563 1563 4490 4782 5093 5652 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19863 5093 5652 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19863 5093 5652 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19863 Q14676 1564 Q14676 Q14676 Mediator of DNA damage checkpoint protein 1 MDC1 sp|Q14676|MDC1_HUMAN Mediator of DNA damage checkpoint protein 1 OS=Homo sapiens GN=MDC1 PE=1 SV=3 0.499656 0 6.6566E-06 135.1 120.76 135.1 S PEPTSRATRGRTNRSSVKTPESIVPIAPELQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.5)S(0.5)VKT(0.001)PESIVPIAPELQPSTSR S(0)S(0)VKT(-28.66)PES(-48.12)IVPIAPELQPS(-126.48)T(-126.48)S(-126.48)R 2 3 -0.14632 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1735 1016 1564 1564 4490 4782 5093 5652 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19863 5093 5652 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19863 5093 5652 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19863 Q14676 1195 Q14676 Q14676 Mediator of DNA damage checkpoint protein 1 MDC1 sp|Q14676|MDC1_HUMAN Mediator of DNA damage checkpoint protein 1 OS=Homo sapiens GN=MDC1 PE=1 SV=3 0.823402 6.68675 8.94206E-35 294.97 264.34 294.97 1 S SEPTSQVTRGRKSRSSVKTPETVVPTALELQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP S(0.177)S(0.823)VKTPETVVPTALELQPSTSTDRPVTSEPTSQATR S(-6.69)S(6.69)VKT(-46.25)PET(-87.47)VVPT(-160.55)ALELQPS(-249.65)T(-255.01)S(-254.57)T(-254.57)DRPVT(-263.92)S(-263.92)EPT(-268.32)S(-267.97)QAT(-267.97)R 2 4 -0.18837 3623.4 0 0 4957.7 0 0 3847.1 0 0 4880.4 0 0 6797.7 0 0 3885.2 0 0 8314.7 0 0 6054 0 0 4563.4 0 0 19923 0 0 3429.5 0 0 4682.9 0 0 3900 0 0 4999.8 0 0 6742 0 0 4003.4 0 0 8288.1 0 0 6588.9 0 0 4661.8 0 0 18900 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22583000 22583000 0 0 NaN 1736 1016 1195 1195 4491 4783 5094 5653 5094 5653 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17747 5094 5653 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17747 5094 5653 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17747 Q14678 325 Q14678 Q14678 KN motif and ankyrin repeat domain-containing protein 1 KANK1 sp|Q14678|KANK1_HUMAN KN motif and ankyrin repeat domain-containing protein 1 OS=Homo sapiens GN=KANK1 PE=1 SV=3 0.641248 2.59269 0.0165024 62.167 39.288 62.167 1 S AASQINVCGVRKRSYSAGNASQLEQLSRARR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX S(0.353)Y(0.005)S(0.641)AGNASQLEQLSR S(-2.59)Y(-20.78)S(2.59)AGNAS(-31.98)QLEQLS(-55.28)R 3 3 -0.027508 6905.3 0 0 6909.2 0 0 5278 0 0 6279.3 0 0 6581.3 0 0 7166.8 0 0 6309.1 0 0 7033.3 0 0 6631.9 0 0 3758.1 0 0 6528.1 0 0 6523.3 0 0 5423.7 0 0 6500.1 0 0 6598.2 0 0 7149.4 0 0 6444 0 0 7173.4 0 0 6530 0 0 3701.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10229000 10229000 0 0 NaN 1737 1017 325 325 4597 4903 5223 5800 5223 5800 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14984 5223 5800 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14984 5223 5800 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14984 Q14680 529 Q14680 Q14680 Maternal embryonic leucine zipper kinase MELK sp|Q14680|MELK_HUMAN Maternal embryonic leucine zipper kinase OS=Homo sapiens GN=MELK PE=1 SV=3 1 73.5727 0.018564 73.573 49.451 73.573 1 S HMEETPKRKGAKVFGSLERGLDKVITVLTRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX VFGS(1)LER VFGS(73.57)LER 4 2 0.52423 9242.8 0 0 19872 0 0 9118.5 0 0 19802 0 0 5472.7 0 0 9166.4 0 0 5129.4 0 0 12108 0 0 22734 0 0 4817 0 0 8745.6 0 0 18772 0 0 9143.6 0 0 20165 0 0 5780.7 0 0 9708.6 0 0 5719.9 0 0 12177 0 0 21685 0 0 4816 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25473000 25473000 0 0 NaN 1738 1019 529 529 5104 5441 5795 6444 5795 6444 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16233 5795 6444 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16233 5795 6444 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16233 Q14684 350 Q14684 Q14684 Ribosomal RNA processing protein 1 homolog B RRP1B sp|Q14684|RRP1B_HUMAN Ribosomal RNA processing protein 1 homolog B OS=Homo sapiens GN=RRP1B PE=1 SV=3 0.999991 50.5118 2.3087E-12 200.91 184.51 200.91 1 S SEGSSISQLSFAEDISADEDDQILSQGKHKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPXXX FQDLSEGSSISQLSFAEDIS(1)ADEDDQILSQGK FQDLS(-115.5)EGS(-96.97)S(-90.12)IS(-77.66)QLS(-50.51)FAEDIS(50.51)ADEDDQILS(-69.87)QGK 20 3 -1.59 1970.2 0 0 4984.6 0 0 2234.3 0 0 3919.4 0 0 1545.7 0 0 3160.5 0 0 1951.9 0 0 8514.4 0 0 5057.3 0 0 140890 0 0 1865.3 0 0 4702.7 0 0 2226.9 0 0 4077.2 0 0 1617.9 0 0 3534.3 0 0 2052.4 0 0 12578 0 0 4858.4 0 0 132860 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 68238000 68238000 0 0 NaN 1739 1020 350 350 1306 1377 1483 1645 1483 1645 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23478 1483 1645 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23478 1483 1645 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23478 Q14684 513 Q14684 Q14684 Ribosomal RNA processing protein 1 homolog B RRP1B sp|Q14684|RRP1B_HUMAN Ribosomal RNA processing protein 1 homolog B OS=Homo sapiens GN=RRP1B PE=1 SV=3 0.999816 37.3553 1.29001E-10 205.96 149.7 205.96 1 S SQSGPSGSHPQGPRGSPTGGAQLLKRKRKLG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPXXXXXX GS(1)PTGGAQLLK GS(37.36)PT(-37.36)GGAQLLK 2 2 0.44335 58527 0 0 79255 0 0 53903 0 0 71232 0 0 103620 0 0 50948 0 0 105210 0 0 82500 0 0 86422 0 0 18421 0 0 55365 0 0 74824 0 0 55154 0 0 73303 0 0 102220 0 0 52403 0 0 106500 0 0 82086 0 0 86069 0 0 19254 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 183810000 183810000 0 0 NaN 1740 1020 513 513 1627 1714 1853 2065 1853 2065 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14993 1853 2065 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14993 1853 2065 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14993 Q14684 706 Q14684 Q14684 Ribosomal RNA processing protein 1 homolog B RRP1B sp|Q14684|RRP1B_HUMAN Ribosomal RNA processing protein 1 homolog B OS=Homo sapiens GN=RRP1B PE=1 SV=3 0.998036 27.1071 1.18961E-06 144.51 105.48 144.51 1 S NMTAEFKKTDKSILVSPTGPSRVAFDPEQKP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX SILVS(0.998)PT(0.002)GPSR S(-46.77)ILVS(27.11)PT(-27.11)GPS(-79.34)R 5 2 0.054348 23075 0 0 25570 0 0 23132 0 0 25298 0 0 31540 0 0 22994 0 0 26513 0 0 26171 0 0 28610 0 0 8229 0 0 21835 0 0 24153 0 0 23383 0 0 25955 0 0 31442 0 0 23206 0 0 27286 0 0 26377 0 0 28141 0 0 8354.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30378000 30378000 0 0 NaN 1741 1020 706 706 3849 4102 4377 4868 4377 4868 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14277 4377 4868 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14277 4377 4868 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14277 Q14684 732 Q14684 Q14684 Ribosomal RNA processing protein 1 homolog B RRP1B sp|Q14684|RRP1B_HUMAN Ribosomal RNA processing protein 1 homolog B OS=Homo sapiens GN=RRP1B PE=1 SV=3 0.997183 28.4898 2.07614E-31 305.46 254.68 305.46 1 S PEQKPLHGVLKTPTSSPASSPLVAKKPLTTT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPXXXXXX T(0.001)PTS(0.001)S(0.997)PASSPLVAK T(-28.49)PT(-36.54)S(-29.27)S(28.49)PAS(-53.34)S(-82.19)PLVAK 5 2 0.75731 21395 0 0 21110 0 0 22387 0 0 19373 0 0 20086 0 0 20927 0 0 19450 0 0 20934 0 0 21737 0 0 11805 0 0 20249 0 0 19932 0 0 22456 0 0 20023 0 0 20512 0 0 20930 0 0 19892 0 0 21354 0 0 21351 0 0 11600 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29472000 29472000 0 0 NaN 1742 1020 732 732 4864 5189 5528 6146 5528 6146 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14388 5528 6146 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14388 5528 6146 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14388 Q14687 909 Q14687 Q14687 Genetic suppressor element 1 GSE1 sp|Q14687|GSE1_HUMAN Genetic suppressor element 1 OS=Homo sapiens GN=GSE1 PE=1 SV=3 0.99944 32.519 8.17212E-11 197.67 173.39 197.67 1 S KQKALSAAVADSLTNSPRDSPAVSLSEPATQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPXXXXXXXXXXXXX ALSAAVADSLT(0.001)NS(0.999)PR ALS(-169.13)AAVADS(-76.64)LT(-32.52)NS(32.52)PR 13 3 -0.32032 5158.3 0 0 6225.4 0 0 5036.2 0 0 6035.5 0 0 6418.8 0 0 5520.2 0 0 6523.8 0 0 5823.7 0 0 6799.8 0 0 3546.4 0 0 4880.6 0 0 5879.8 0 0 5095.3 0 0 6200.4 0 0 6433.9 0 0 5566.6 0 0 6643.2 0 0 5936.7 0 0 6697.7 0 0 3474.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 44645000 44645000 0 0 NaN 1743 1022 909 909 309 330 351 391 351 391 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17116 351 391 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17116 351 391 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17116 Q14687 710 Q14687 Q14687 Genetic suppressor element 1 GSE1 sp|Q14687|GSE1_HUMAN Genetic suppressor element 1 OS=Homo sapiens GN=GSE1 PE=1 SV=3 1 67.1152 5.54948E-44 337.85 308.43 337.85 1 S QAATFGELSGPLKPGSPYRPPVPRAPDPAYI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPXXXXXXX ASLPQAATFGELSGPLKPGS(1)PYRPPVPR AS(-252.19)LPQAAT(-155.66)FGELS(-67.12)GPLKPGS(67.12)PY(-148.15)RPPVPR 20 4 -0.44028 7544 0 0 21877 0 0 7737.7 0 0 19810 0 0 7264.2 0 0 9016.2 0 0 6691.4 0 0 12689 0 0 21574 0 0 21547 0 0 7139.3 0 0 20654 0 0 7773.4 0 0 20293 0 0 7405.6 0 0 9605.8 0 0 7246.3 0 0 13235 0 0 20656 0 0 20583 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 60612000 60612000 0 0 NaN 1744 1022 710 710 474 504 542;543 606;607 542 606 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20395 542 606 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20395 542 606 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20395 Q14687 826 Q14687 Q14687 Genetic suppressor element 1 GSE1 sp|Q14687|GSE1_HUMAN Genetic suppressor element 1 OS=Homo sapiens GN=GSE1 PE=1 SV=3 0.999998 56.5499 1.05338E-06 138.56 102.8 138.56 2 S VAQKRRKRRRMLRERSPSPPTIQSKRQTPSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX ERS(1)PS(1)PPTIQSK ERS(56.55)PS(36.19)PPT(-36.19)IQS(-79.56)K 3 3 -0.040299 0 17253 0 0 31989 0 0 19659 0 0 28047 0 0 26728 0 0 22443 0 0 31429 0 0 28280 0 0 33750 0 0 3422.8 0 0 16334 0 0 30196 0 0 19752 0 0 28949 0 0 26775 0 0 22826 0 0 31830 0 0 28244 0 0 33203 0 0 3877.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 85450000 0 85450000 0 NaN 1745 1022 826 826 1139 1199 1291 1420 1291 1420 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10377 1291 1420 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10377 1291 1420 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10377 Q14687 828 Q14687 Q14687 Genetic suppressor element 1 GSE1 sp|Q14687|GSE1_HUMAN Genetic suppressor element 1 OS=Homo sapiens GN=GSE1 PE=1 SV=3 0.99976 36.1908 1.05338E-06 138.56 102.8 138.56 2 S QKRRKRRRMLRERSPSPPTIQSKRQTPSPRL X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX ERS(1)PS(1)PPTIQSK ERS(56.55)PS(36.19)PPT(-36.19)IQS(-79.56)K 5 3 -0.040299 0 17253 0 0 31989 0 0 19659 0 0 28047 0 0 26728 0 0 22443 0 0 31429 0 0 28280 0 0 33750 0 0 3422.8 0 0 16334 0 0 30196 0 0 19752 0 0 28949 0 0 26775 0 0 22826 0 0 31830 0 0 28244 0 0 33203 0 0 3877.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 85450000 0 85450000 0 NaN 1746 1022 828 828 1139 1199 1291 1420 1291 1420 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10377 1291 1420 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10377 1291 1420 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10377 Q14692 552 Q14692 Q14692 Ribosome biogenesis protein BMS1 homolog BMS1 sp|Q14692|BMS1_HUMAN Ribosome biogenesis protein BMS1 homolog OS=Homo sapiens GN=BMS1 PE=1 SV=1 1 67.2143 8.19145E-16 214.32 176.99 214.32 1 S ISGSKAAGEGSKAGLSPANCQSDRVNLEKSL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX AGLS(1)PANCQSDR AGLS(67.21)PANCQS(-67.21)DR 4 2 -1.3964 20487 0 0 21182 0 0 20526 0 0 20549 0 0 11957 0 0 20153 0 0 10730 0 0 18095 0 0 23427 0 0 6661.8 0 0 19386 0 0 20006 0 0 20559 0 0 21132 0 0 12635 0 0 20205 0 0 11328 0 0 18431 0 0 22577 0 0 6691.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 43718000 43718000 0 0 NaN 1747 1023 552 552 213 223 241 269 241 269 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8208 241 269 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8208 241 269 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8208 Q14694 576 Q14694 Q14694 Ubiquitin carboxyl-terminal hydrolase 10 USP10 sp|Q14694|UBP10_HUMAN Ubiquitin carboxyl-terminal hydrolase 10 OS=Homo sapiens GN=USP10 PE=1 SV=2 1 187.26 5.07267E-33 301.32 285.64 301.32 1 S NHSVNEEEQEEQGEGSEDEWEQVGPRNKTSV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPXXXXX NHSVNEEEQEEQGEGS(1)EDEWEQVGPR NHS(-187.26)VNEEEQEEQGEGS(187.26)EDEWEQVGPR 16 3 0.7905 6074.6 0 0 5838.5 0 0 5352.4 0 0 6464.5 0 0 7238.6 0 0 5996.7 0 0 5805.2 0 0 6387.8 0 0 7066.9 0 0 5447.9 0 0 5745.4 0 0 5519 0 0 5451.5 0 0 6591.8 0 0 7215.3 0 0 6046.9 0 0 6012.6 0 0 6556.4 0 0 6919.4 0 0 5277.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 34312000 34312000 0 0 NaN 1748 1024 576 576 2826 2996 3209 3562 3209 3562 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12516 3209 3562 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12516 3209 3562 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12516 Q14694 211 Q14694 Q14694 Ubiquitin carboxyl-terminal hydrolase 10 USP10 sp|Q14694|UBP10_HUMAN Ubiquitin carboxyl-terminal hydrolase 10 OS=Homo sapiens GN=USP10 PE=1 SV=2 0.907979 10.1726 6.68217E-08 161.85 150.07 161.85 1 S FMGDMPPSVTPRTCNSPQNSTDSVSDIVPDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP T(0.087)CNS(0.908)PQNS(0.005)TDSVSDIVPDSPFPGALGSDTR T(-10.17)CNS(10.17)PQNS(-22.94)T(-38.01)DS(-52.81)VS(-73.01)DIVPDS(-125.16)PFPGALGS(-147.18)DT(-151.1)R 4 3 -0.37405 6397.8 0 0 7727.6 0 0 7351.8 0 0 7951.8 0 0 5674.8 0 0 7913.5 0 0 6646.6 0 0 9538.5 0 0 8988.3 0 0 91556 0 0 6057.5 0 0 7301.2 0 0 7329.3 0 0 8150.4 0 0 5873.8 0 0 8126.6 0 0 6783.1 0 0 12264 0 0 8769.4 0 0 86432 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 42983000 42983000 0 0 NaN 1749 1024 211 211 4649 4960 5284 5870;5871;5872 5284 5871 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21236 5284 5871 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21236 5284 5871 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21236 Q14694 365 Q14694 Q14694 Ubiquitin carboxyl-terminal hydrolase 10 USP10 sp|Q14694|UBP10_HUMAN Ubiquitin carboxyl-terminal hydrolase 10 OS=Homo sapiens GN=USP10 PE=1 SV=2 0.996773 24.9283 6.38246E-07 139.49 98.091 139.49 1 S KPSSSSPVAYVETKYSPPAISPLVSEKQVEV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPXXXX Y(0.003)S(0.997)PPAISPLVSEK Y(-24.93)S(24.93)PPAIS(-46.48)PLVS(-125.46)EK 2 3 0.86725 4612.5 0 0 8310.7 0 0 4802.9 0 0 8598.6 0 0 5051 0 0 5064.8 0 0 6081 0 0 6074.5 0 0 7824.6 0 0 5372.2 0 0 4365.3 0 0 7852.4 0 0 4830.3 0 0 8754.4 0 0 5127.3 0 0 5257.2 0 0 6188.2 0 0 6215.9 0 0 7646.6 0 0 5199.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23548000 23548000 0 0 NaN 1750 1024 365 365 5431 5784 6175 6872 6175 6872 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20034 6175 6872 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20034 6175 6872 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20034 Q14694 370 Q14694 Q14694 Ubiquitin carboxyl-terminal hydrolase 10 USP10 sp|Q14694|UBP10_HUMAN Ubiquitin carboxyl-terminal hydrolase 10 OS=Homo sapiens GN=USP10 PE=1 SV=2 0.998299 28.1146 0.00667965 82.349 46.327 82.349 1 S SPVAYVETKYSPPAISPLVSEKQVEVKEGLV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPXXXXXXXXX YS(0.002)PPAIS(0.998)PLVSEK Y(-49.15)S(-28.11)PPAIS(28.11)PLVS(-38.3)EK 7 3 -0.49309 3629.2 0 0 6762.8 0 0 4633.6 0 0 7239.5 0 0 4537 0 0 4182.1 0 0 5600.9 0 0 5274.2 0 0 6581.3 0 0 5889.3 0 0 3437.9 0 0 6391.3 0 0 4608.9 0 0 7355 0 0 4625.8 0 0 4353.1 0 0 5677 0 0 5425.5 0 0 6452.2 0 0 5667.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8194100 8194100 0 0 NaN 1751 1024 370 370 5431 5784 6174 6871 6174 6871 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19562 6174 6871 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19562 6174 6871 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19562 Q14738 598 Q14738 Q14738 Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform PPP2R5D sp|Q14738|2A5D_HUMAN Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform OS=Homo sapiens GN=PPP2R5D PE=1 SV=1 0.973655 15.6771 1.41783E-05 136.7 124.85 136.7 1 S KALEAHKRAEEFLTASQEAL___________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX AEEFLT(0.026)AS(0.974)QEAL AEEFLT(-15.68)AS(15.68)QEAL 8 2 -0.97911 5608.2 0 0 5778.3 0 0 5764.5 0 0 6256.2 0 0 11893 0 0 5797 0 0 11067 0 0 7520 0 0 5813.4 0 0 22230 0 0 5307.4 0 0 5461.3 0 0 5869 0 0 6387.1 0 0 11691 0 0 5894.6 0 0 11161 0 0 8146.1 0 0 5958.8 0 0 21106 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22231000 22231000 0 0 NaN 1752 1025 598 598 132 138 149 168 149 168 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20696 149 168 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20696 149 168 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20696 Q14739 59 Q14739 Q14739 Lamin-B receptor LBR sp|Q14739|LBR_HUMAN Lamin-B receptor OS=Homo sapiens GN=LBR PE=1 SV=2 0.685364 3.38112 0.0213798 56.872 43.519 56.872 1 S GTELELKENDIKPLTSFRQRKGGSTSSSPSR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX ENDIKPLT(0.315)S(0.685)FR ENDIKPLT(-3.38)S(3.38)FR 9 3 -0.76538 8669.9 0 0 16487 0 0 9591.8 0 0 18277 0 0 10006 0 0 9624.4 0 0 10878 0 0 14081 0 0 18638 0 0 3116.6 0 0 8207.4 0 0 15585 0 0 9612.1 0 0 18518 0 0 10149 0 0 10095 0 0 11244 0 0 14045 0 0 18061 0 0 3260.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 36871000 36871000 0 0 NaN 1753 1026 59 59 1069 1127 1215 1336 1215 1336 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16072 1215 1336 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16072 1215 1336 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16072 Q14739 71 Q14739 Q14739 Lamin-B receptor LBR sp|Q14739|LBR_HUMAN Lamin-B receptor OS=Homo sapiens GN=LBR PE=1 SV=2 0.845584 8.49811 0.00394949 91.076 62.452 91.076 1 S PLTSFRQRKGGSTSSSPSRRRGSRSRSRSRS X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY) XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX KGGS(0.007)T(0.007)S(0.021)S(0.119)S(0.846)PSR KGGS(-20.82)T(-20.82)S(-16.11)S(-8.5)S(8.5)PS(-36.26)R 8 3 -1.5826 9019.4 0 0 18038 0 0 9208.9 0 0 17311 0 0 12937 0 0 10276 0 0 15774 0 0 17564 0 0 21006 0 0 10291 0 0 8535.4 0 0 17036 0 0 9312.9 0 0 17706 0 0 12954 0 0 10725 0 0 16063 0 0 17646 0 0 20504 0 0 10097 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 56408000 56408000 0 0 NaN 1754 1026 71 71 2065;2066 2185;2186 2353;2354 2623;2624 2353 2623 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5207 2353 2623 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5207 2353 2623 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5207 Q14739 128 Q14739 Q14739 Lamin-B receptor LBR sp|Q14739|LBR_HUMAN Lamin-B receptor OS=Homo sapiens GN=LBR PE=1 SV=2 0.930253 11.2507 6.87395E-16 226.11 204.34 226.11 1 S VEVKLTPLILKPFGNSISRYNGEPEHIERND X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX LTPLILKPFGNS(0.93)IS(0.07)R LT(-147.33)PLILKPFGNS(11.25)IS(-11.25)R 12 3 -0.36191 56709 0 0 98118 0 0 59695 0 0 93626 0 0 30507 0 0 59277 0 0 32781 0 0 63270 0 0 99648 0 0 20377 0 0 53672 0 0 92663 0 0 59585 0 0 95854 0 0 32778 0 0 61038 0 0 35090 0 0 63923 0 0 95487 0 0 20652 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 212510000 212510000 0 0 NaN 1755 1026 128 128 2627 2774 2975 3312 2975 3312 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23373 2975 3312 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23373 2975 3312 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23373 Q14739 97 Q14739 Q14739 Lamin-B receptor LBR sp|Q14739|LBR_HUMAN Lamin-B receptor OS=Homo sapiens GN=LBR PE=1 SV=2 0.999841 38.3275 9.54752E-08 171.81 131.89 171.81 1 S SRSRSPGRPPKSARRSASASHQADIKEARRE X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPXXXXX S(1)ASASHQADIK S(38.33)AS(-38.33)AS(-49.03)HQADIK 1 3 0.17019 9971.5 0 0 10228 0 0 9072.9 0 0 10635 0 0 6949.5 0 0 9617.8 0 0 10549 0 0 11902 0 0 11327 0 0 2269.2 0 0 9432.2 0 0 9664.7 0 0 9168.4 0 0 10878 0 0 7229.4 0 0 9718.7 0 0 10586 0 0 11918 0 0 11143 0 0 2412.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 268670000 268670000 0 0 NaN 1756 1026 97 97 3462;3601 3678;3828 4081 4537 4081 4537 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7585 4081 4537 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7585 4081 4537 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7585 Q14739 99 Q14739 Q14739 Lamin-B receptor LBR sp|Q14739|LBR_HUMAN Lamin-B receptor OS=Homo sapiens GN=LBR PE=1 SV=2 0.636682 2.93489 2.84555E-07 153.21 77.75 153.21 1 S SRSPGRPPKSARRSASASHQADIKEARREVE Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX RS(0.324)AS(0.637)AS(0.039)HQADIK RS(-2.93)AS(2.93)AS(-12.08)HQADIK 4 3 0.40837 10159 0 0 13535 0 0 9758.9 0 0 12062 0 0 10756 0 0 13256 0 0 20804 0 0 19124 0 0 12469 0 0 2364.9 0 0 9611.6 0 0 12777 0 0 9880.8 0 0 12494 0 0 10991 0 0 13312 0 0 20466 0 0 19027 0 0 12656 0 0 2669.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 49589000 49589000 0 0 NaN 1757 1026 99 99 3462;3601 3678;3828 3924 4359 3924 4359 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6315 3924 4359 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6315 3924 4359 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6315 Q14739 86 Q14739 Q14739 Lamin-B receptor LBR sp|Q14739|LBR_HUMAN Lamin-B receptor OS=Homo sapiens GN=LBR PE=1 SV=2 1 50.5625 0.00505915 90.761 55.661 50.563 1;2 S SPSRRRGSRSRSRSRSPGRPPKSARRSASAS Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX S(1)RS(1)PGRPPK S(50.56)RS(50.56)PGRPPK 3 3 -0.042601 62402 16024 0 98379 23649 0 61839 16497 0 97145 23226 0 93789 21323 0 62406 18093 0 89266 20536 0 87038 21295 0 101680 22518 0 5759.9 4927.7 0 59047 15164 0 92928 22338 0 62683 16642 0 99262 23791 0 93239 21345 0 64423 18414 0 91422 20996 0 86524 21385 0 99804 22134 0 7438 5132.8 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 434990000 369600000 65384000 0 NaN 1758 1026 86 86 4111;4288 4383;4571;4572 4673;4871;4872 5188;5406;5407;5408 4872 5407 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5870 4673 5188 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6486 4673 5188 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6486 Q14739 84 Q14739 Q14739 Lamin-B receptor LBR sp|Q14739|LBR_HUMAN Lamin-B receptor OS=Homo sapiens GN=LBR PE=1 SV=2 1 50.5625 0.0346724 50.563 29.722 50.563 2 S SSSPSRRRGSRSRSRSRSPGRPPKSARRSAS X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY) XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(1)RS(1)PGRPPK S(50.56)RS(50.56)PGRPPK 1 3 -0.042601 0 16024 0 0 23649 0 0 16497 0 0 23226 0 0 21323 0 0 18093 0 0 20536 0 0 21295 0 0 22518 0 0 4927.7 0 0 15164 0 0 22338 0 0 16642 0 0 23791 0 0 21345 0 0 18414 0 0 20996 0 0 21385 0 0 22134 0 0 5132.8 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 65384000 0 65384000 0 NaN 1759 1026 84 84 4288 4571;4572 4872 5407;5408 4872 5407 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5870 4872 5407 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5870 4872 5407 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5870 Q147X3 190 Q147X3 Q147X3 N-alpha-acetyltransferase 30 NAA30 sp|Q147X3|NAA30_HUMAN N-alpha-acetyltransferase 30 OS=Homo sapiens GN=NAA30 PE=1 SV=1 0.91526 10.5887 4.24389E-07 161.49 131.16 161.49 1 S QEEEEEDEQVRLLSSSLTADCSLRSPSGREV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPXXXXXXX LLS(0.001)S(0.08)S(0.915)LT(0.004)ADCSLR LLS(-32.32)S(-10.59)S(10.59)LT(-23.3)ADCS(-73.07)LR 5 2 -0.13271 10052 0 0 10298 0 0 8389.9 0 0 9376.6 0 0 19229 0 0 8932.2 0 0 19639 0 0 13891 0 0 8791.7 0 0 19541 0 0 9505.5 0 0 9723.3 0 0 8677.2 0 0 9676.8 0 0 18869 0 0 9072 0 0 19674 0 0 14330 0 0 9134.9 0 0 18721 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13046000 13046000 0 0 NaN 1760 1028 190 190 2463 2601 2795 3122 2795 3122 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18992 2795 3122 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18992 2795 3122 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18992 Q14814 231 Q14814 Q14814 Myocyte-specific enhancer factor 2D MEF2D sp|Q14814|MEF2D_HUMAN Myocyte-specific enhancer factor 2D OS=Homo sapiens GN=MEF2D PE=1 SV=1 1 99.6967 7.54372E-05 117.4 89.073 117.4 1 S ACPSPVGNGYVSARASPGLLPVANGNSLNKV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPX AS(1)PGLLPVANGNSLNK AS(99.7)PGLLPVANGNS(-99.7)LNK 2 3 -0.099687 13344 0 0 5543.3 0 0 15178 0 0 5196.4 0 0 4586.3 0 0 12948 0 0 5268.2 0 0 8176.7 0 0 5756.5 0 0 5978.4 0 0 12633 0 0 5234.5 0 0 15050 0 0 5481.2 0 0 5289.7 0 0 12583 0 0 5343.2 0 0 8566.9 0 0 5659.2 0 0 5818.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11428000 11428000 0 0 NaN 1761 1029 231 231 481 512 551 615 551 615 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18539 551 615 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18539 551 615 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18539 Q14814 180 Q14814 Q14814 Myocyte-specific enhancer factor 2D MEF2D sp|Q14814|MEF2D_HUMAN Myocyte-specific enhancer factor 2D OS=Homo sapiens GN=MEF2D PE=1 SV=1 1 159.576 6.21222E-07 159.58 119.48 159.58 1 S TPSLVTSSLTDPRLLSPQQPALQRNSVSPGL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX LLS(1)PQQPALQR LLS(159.58)PQQPALQR 3 2 -1.2408 30380 0 0 12772 0 0 30775 0 0 13749 0 0 12049 0 0 29009 0 0 11733 0 0 17985 0 0 14521 0 0 27602 0 0 28748 0 0 12071 0 0 30736 0 0 14303 0 0 13331 0 0 28310 0 0 12035 0 0 19299 0 0 14209 0 0 26407 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30993000 30993000 0 0 NaN 1762 1029 180 180 2460 2598 2792 3119 2792 3119 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15761 2792 3119 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15761 2792 3119 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15761 Q14814 121 Q14814 Q14814 Myocyte-specific enhancer factor 2D MEF2D sp|Q14814|MEF2D_HUMAN Myocyte-specific enhancer factor 2D OS=Homo sapiens GN=MEF2D PE=1 SV=1 1 121.824 0.000149879 121.82 83.467 121.82 1 S SLEQSPLLEDKYRRASEELDGLFRRYGSTVP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX RAS(1)EELDGLFR RAS(121.82)EELDGLFR 3 2 0.65773 20148 0 0 6093.4 0 0 19154 0 0 4828.4 0 0 11128 0 0 20985 0 0 11948 0 0 12439 0 0 5249.3 0 0 19968 0 0 19061 0 0 5749.1 0 0 19247 0 0 5294.5 0 0 11772 0 0 20243 0 0 11939 0 0 13410 0 0 5463.6 0 0 19090 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20985000 20985000 0 0 NaN 1763 1029 121 121 3191 3384 3616 4007 3616 4007 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18212 3616 4007 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18212 3616 4007 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18212 Q14814 444 Q14814 Q14814 Myocyte-specific enhancer factor 2D MEF2D sp|Q14814|MEF2D_HUMAN Myocyte-specific enhancer factor 2D OS=Homo sapiens GN=MEF2D PE=1 SV=1 0.990982 20.4229 0.00924656 71.558 44.885 71.558 1 S TVTTHPHISIKSEPVSPSRERSPAPPPPAVF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX SEPVS(0.991)PS(0.009)RER S(-45.58)EPVS(20.42)PS(-20.42)RER 5 3 0.75232 16260 0 0 5095.9 0 0 16911 0 0 6517.4 0 0 9164.2 0 0 18012 0 0 12279 0 0 12573 0 0 4754.7 0 0 3177.2 0 0 15389 0 0 4822 0 0 16902 0 0 6789.8 0 0 9794.2 0 0 17480 0 0 12143 0 0 12918 0 0 5010.5 0 0 3282.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17502000 17502000 0 0 NaN 1764 1029 444 444 3698 3933 4193 4659 4193 4659 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5868 4193 4659 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5868 4193 4659 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5868 Q14839 1531 Q14839 Q14839 Chromodomain-helicase-DNA-binding protein 4 CHD4 sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4 PE=1 SV=2 0.999241 28.1813 0.00484883 84.829 61.912 84.829 2 S WSMPELAEVEENKKMSQPGSPSPKTPTPSTP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX KMS(0.999)QPGS(0.5)PS(0.5)PK KMS(28.18)QPGS(0)PS(0)PK 3 3 0.0843 0 27414 0 0 28253 0 0 32721 0 0 27157 0 0 31001 0 0 35490 0 0 36834 0 0 31801 0 0 34870 0 0 8214.4 0 0 25960 0 0 26684 0 0 32633 0 0 28085 0 0 31642 0 0 35171 0 0 37160 0 0 32289 0 0 34490 0 0 8470.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 62100000 0 62100000 0 NaN 1765 1030 1531 1531 2141;2752 2263;2919;2920 2437 2714 2437 2714 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9889 2437 2714 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9889 2437 2714 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9889 Q14839 1535 Q14839 Q14839 Chromodomain-helicase-DNA-binding protein 4 CHD4 sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4 PE=1 SV=2 0.998698 28.8479 2.29433E-06 154.74 124.13 154.74 1;2 S ELAEVEENKKMSQPGSPSPKTPTPSTPGDTQ X;X;X;X;X;X;X;X;X;X;Oxidation (M);Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX MSQPGS(0.999)PS(0.001)PK MS(-73.1)QPGS(28.85)PS(-28.85)PK 6 2 0.40435 103350 27414 0 103410 28253 0 106140 32721 0 102280 27157 0 78625 31001 0 102530 35490 0 79889 36834 0 93232 31801 0 106210 34870 0 16412 8214.4 0 97805 25960 0 97686 26684 0 106380 32633 0 105100 28085 0 81456 31642 0 102670 35171 0 81980 37160 0 94373 32289 0 103680 34490 0 17612 8470.8 0 3 1 0 3 1 0 3 1 0 3 1 0 3 1 0 3 1 0 3 1 0 3 1 0 3 1 0 3 1 0 453480000 391380000 62100000 0 NaN 1766 1030 1535 1535 2141;2752 2263;2919;2920 2437;3129;3130 2714;3476;3477;3478 3130 3477 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9469 3130 3477 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9469 3130 3477 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9469 Q14839 1537 Q14839 Q14839 Chromodomain-helicase-DNA-binding protein 4 CHD4 sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4 PE=1 SV=2 0.50038 0 0.00484883 84.829 61.912 84.829 2 S AEVEENKKMSQPGSPSPKTPTPSTPGDTQPN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KMS(0.999)QPGS(0.5)PS(0.5)PK KMS(28.18)QPGS(0)PS(0)PK 9 3 0.0843 0 27414 0 0 28253 0 0 32721 0 0 27157 0 0 31001 0 0 35490 0 0 36834 0 0 31801 0 0 34870 0 0 8214.4 0 0 25960 0 0 26684 0 0 32633 0 0 28085 0 0 31642 0 0 35171 0 0 37160 0 0 32289 0 0 34490 0 0 8470.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 62100000 0 62100000 0 NaN 1767 1030 1537 1537 2141;2752 2263;2919;2920 2437 2714 2437 2714 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9889 2437 2714 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9889 2437 2714 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9889 Q14839 1349 Q14839 Q14839 Chromodomain-helicase-DNA-binding protein 4 CHD4 sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4 PE=1 SV=2 1 241.541 3.64113E-31 308.22 275.66 308.22 1 S GKGKRIRKQVNYNDGSQEDRDWQDDQSDNQS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPXXXXXXXXXXX QVNYNDGS(1)QEDR QVNY(-241.54)NDGS(241.54)QEDR 8 2 0.3396 34355 0 0 25614 0 0 34593 0 0 22860 0 0 49496 0 0 34541 0 0 56412 0 0 41620 0 0 24545 0 0 8948.3 0 0 32509 0 0 24181 0 0 35015 0 0 23828 0 0 49416 0 0 34206 0 0 56218 0 0 41743 0 0 25570 0 0 9389.2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 54986000 54986000 0 0 NaN 1768 1030 1349 1349 2190;3167 2314;3359 2491;3591 2774;3981 3591 3981 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7355 3591 3981 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7355 3591 3981 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7355 Q14839 303 Q14839 Q14839 Chromodomain-helicase-DNA-binding protein 4 CHD4 sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4 PE=1 SV=2 1 87.8065 0.00625527 87.806 50.331 87.806 1 S PKKVAPLKIKLGGFGSKRKRSSSEDDDLDVE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPXXXXXXXXXXXXX LGGFGS(1)KR LGGFGS(87.81)KR 6 3 -2.3036 11485 0 0 32624 0 0 11248 0 0 30943 0 0 36243 0 0 12682 0 0 39072 0 0 27525 0 0 30925 0 0 1153 0 0 10867 0 0 30810 0 0 11651 0 0 31581 0 0 35336 0 0 13716 0 0 39413 0 0 27069 0 0 30859 0 0 1722.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 82854000 82854000 0 0 NaN 1769 1030 303 303 2366 2499 2688 3001 2688 3001 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13190 2688 3001 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13190 2688 3001 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13190 Q14839 515 Q14839 Q14839 Chromodomain-helicase-DNA-binding protein 4 CHD4 sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4 PE=1 SV=2 0.734899 4.42816 6.16619E-08 154.66 135.78 154.66 1 S GKVQKILIWKWGQPPSPTPVPRPPDADPNTP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP WGQPPS(0.735)PT(0.265)PVPRPPDADPNTPSPK WGQPPS(4.43)PT(-4.43)PVPRPPDADPNT(-72.57)PS(-90.5)PK 6 3 -0.24883 5428 0 0 5389.8 0 0 5234.5 0 0 5167.4 0 0 6361.6 0 0 5025.8 0 0 5218.3 0 0 5677.3 0 0 6997.6 0 0 21169 0 0 5135.6 0 0 5090.3 0 0 5293.6 0 0 5317 0 0 6374.8 0 0 5091.9 0 0 5415.5 0 0 6307.4 0 0 6829.1 0 0 20064 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10256000 10256000 0 0 NaN 1770 1030 515 515 5338 5686 6064 6738 6064 6738 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16299 6064 6738 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16299 6064 6738 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16299 Q14847 146 Q14847 Q14847 LIM and SH3 domain protein 1 LASP1 sp|Q14847|LASP1_HUMAN LIM and SH3 domain protein 1 OS=Homo sapiens GN=LASP1 PE=1 SV=2 0.986861 20.505 3.00097E-12 193.61 173.63 193.61 1 S MGPSGGEGMEPERRDSQDGSSYRRPLEQQQP Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPXXXXXXXX MGPSGGEGMEPERRDS(0.987)QDGS(0.004)S(0.009)YR MGPS(-128.44)GGEGMEPERRDS(20.5)QDGS(-23.55)S(-20.5)Y(-109.29)R 16 3 -0.098026 10657 0 0 6826.9 0 0 10625 0 0 6252 0 0 31998 0 0 10851 0 0 38635 0 0 20157 0 0 7139.6 0 0 12991 0 0 10084 0 0 6445.9 0 0 10975 0 0 6528.4 0 0 31274 0 0 10813 0 0 38146 0 0 20249 0 0 8380.5 0 0 12699 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 34979000 34979000 0 0 NaN 1771 1031 146 146 2701;3215 2861;2862;3409 3069;3070;3643 3415;3416;4039 3070 3416 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9127 3070 3416 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9127 3070 3416 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9127 Q14938 265 Q14938 Q14938 Nuclear factor 1 X-type NFIX sp|Q14938|NFIX_HUMAN Nuclear factor 1 X-type OS=Homo sapiens GN=NFIX PE=1 SV=2 0.938383 13.5026 0.000152351 126.32 85.036 126.32 1 S SPSYYNINQVTLGRRSITSPPSTSTTKRPKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(0.938)IT(0.042)S(0.02)PPSTSTTK S(13.5)IT(-13.5)S(-16.81)PPS(-39.08)T(-42.86)S(-59.48)T(-65.78)T(-74.96)K 1 2 0.72565 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1772 1032 265 265 3873 4127 4404 4898 4404 4898 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11045 4404 4898 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11045 4404 4898 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11045 Q14966 1401 Q14966 Q14966 Zinc finger protein 638 ZNF638 sp|Q14966|ZN638_HUMAN Zinc finger protein 638 OS=Homo sapiens GN=ZNF638 PE=1 SV=2 0.936158 11.6624 0.00145181 104.39 76.652 104.39 1 S DVSSSKPSIKAVIVSSPKAKATVSKTENQKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPXXXXXXXXXXXXX AVIVS(0.064)S(0.936)PK AVIVS(-11.66)S(11.66)PK 6 2 0.72091 21291 0 0 30480 0 0 21672 0 0 30528 0 0 16078 0 0 20677 0 0 17402 0 0 25724 0 0 34749 0 0 7537.8 0 0 20148 0 0 28793 0 0 21735 0 0 31184 0 0 16682 0 0 21243 0 0 18125 0 0 25835 0 0 33551 0 0 7693.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 137360000 137360000 0 0 NaN 1773 1033 1401 1401 556 593 634 708 634 708 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13086 634 708 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13086 634 708 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13086 Q14966 605 Q14966 Q14966 Zinc finger protein 638 ZNF638 sp|Q14966|ZN638_HUMAN Zinc finger protein 638 OS=Homo sapiens GN=ZNF638 PE=1 SV=2 1 140.244 5.05619E-06 140.24 122.11 140.24 1 S EFNKQKHLEAADKGHSPAQKPKTSSGTKPSV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX GHS(1)PAQKPK GHS(140.24)PAQKPK 3 3 -0.47304 15627 0 0 14895 0 0 15434 0 0 16293 0 0 12907 0 0 16961 0 0 11728 0 0 15870 0 0 17163 0 0 3392.5 0 0 14786 0 0 14079 0 0 15519 0 0 16655 0 0 13236 0 0 16964 0 0 12144 0 0 16064 0 0 16704 0 0 3561.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18201000 18201000 0 0 NaN 1774 1033 605 605 1464 1541 1663 1843 1663 1843 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6133 1663 1843 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6133 1663 1843 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6133 Q14966 552 Q14966 Q14966 Zinc finger protein 638 ZNF638 sp|Q14966|ZN638_HUMAN Zinc finger protein 638 OS=Homo sapiens GN=ZNF638 PE=1 SV=2 1 72.0892 0.010458 72.089 40.658 72.089 1 S SRSRSPYRIRNPFRGSPKCFRSVSPERMSRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPXXXXXXXXXXXXX NPFRGS(1)PK NPFRGS(72.09)PK 6 3 -0.24138 47925 0 0 41735 0 0 49722 0 0 39659 0 0 29729 0 0 46873 0 0 32165 0 0 40125 0 0 43967 0 0 4589.8 0 0 45356 0 0 39414 0 0 49724 0 0 40963 0 0 31395 0 0 46585 0 0 32947 0 0 40648 0 0 42882 0 0 5250.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 72897000 72897000 0 0 NaN 1775 1033 552 552 2883 3056 3273 3629 3273 3629 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11035 3273 3629 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11035 3273 3629 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11035 Q14966 383 Q14966 Q14966 Zinc finger protein 638 ZNF638 sp|Q14966|ZN638_HUMAN Zinc finger protein 638 OS=Homo sapiens GN=ZNF638 PE=1 SV=2 0.999995 53.2816 1.7969E-07 149.41 130.09 149.41 1 S GSKKNYQSQADIPIRSPFGIVKASWLPKFSH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPXXXXXXXXX NYQSQADIPIRS(1)PFGIVK NY(-98.63)QS(-53.28)QADIPIRS(53.28)PFGIVK 12 3 0.21136 14941 0 0 16005 0 0 15419 0 0 16830 0 0 5581.7 0 0 15847 0 0 6954.3 0 0 14127 0 0 17996 0 0 17154 0 0 14140 0 0 15124 0 0 15381 0 0 17214 0 0 6275 0 0 15939 0 0 7315.3 0 0 14754 0 0 17288 0 0 16479 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15454000 15454000 0 0 NaN 1776 1033 383 383 2970 3149 3371 3737 3371 3737 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20135 3371 3737 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20135 3371 3737 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20135 Q14978 563 Q14978 Q14978 Nucleolar and coiled-body phosphoprotein 1 NOLC1 sp|Q14978|NOLC1_HUMAN Nucleolar and coiled-body phosphoprotein 1 OS=Homo sapiens GN=NOLC1 PE=1 SV=2 1 183.598 6.29143E-11 183.6 122.37 183.6 1 S GTSALTAQNGKAAKNSEEEEEEKKKAAVVVS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX AAKNS(1)EEEEEEK AAKNS(183.6)EEEEEEK 5 3 0.40188 33310 0 0 35993 0 0 28210 0 0 34500 0 0 39034 0 0 28808 0 0 39598 0 0 33190 0 0 34112 0 0 25110 0 0 31500 0 0 33993 0 0 28833 0 0 35423 0 0 38976 0 0 29232 0 0 40130 0 0 33879 0 0 33891 0 0 24413 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 76007000 76007000 0 0 NaN 1777 1035 563 563 39 42 46 56 46 56 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7830 46 56 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7830 46 56 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7830 Q14978 623 Q14978 Q14978 Nucleolar and coiled-body phosphoprotein 1 NOLC1 sp|Q14978|NOLC1_HUMAN Nucleolar and coiled-body phosphoprotein 1 OS=Homo sapiens GN=NOLC1 PE=1 SV=2 0.99958 33.7664 0.0153112 74.269 6.7614 74.269 1 S PNTFPKRKKGEKRASSPFRRVREEEIEVDSR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX ASS(1)PFRR AS(-33.77)S(33.77)PFRR 3 2 -0.6391 32340 0 0 41304 0 0 31128 0 0 46612 0 0 46004 0 0 30584 0 0 45758 0 0 41636 0 0 49563 0 0 7027.8 0 0 30597 0 0 39049 0 0 31595 0 0 47278 0 0 45807 0 0 31523 0 0 46694 0 0 41548 0 0 48742 0 0 7581.2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 1204200000 1204200000 0 0 NaN 1778 1035 623 623 505;3202 536;3396 576;3630 642;4026 576 642 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7027 576 642 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7027 3630 4026 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6763 Q14978 698 Q14978 Q14978 Nucleolar and coiled-body phosphoprotein 1 NOLC1 sp|Q14978|NOLC1_HUMAN Nucleolar and coiled-body phosphoprotein 1 OS=Homo sapiens GN=NOLC1 PE=1 SV=2 1 127.259 8.517E-17 247.36 220.93 247.36 1 S RGGSISVQVNSIKFDSE______________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPXXXXXXXXXXXXXX GGSISVQVNSIKFDS(1)E GGS(-225.99)IS(-212.68)VQVNS(-127.26)IKFDS(127.26)E 15 3 0.1723 102930 0 0 109210 0 0 120760 0 0 123450 0 0 149010 0 0 103010 0 0 150170 0 0 166270 0 0 135420 0 0 1877500 0 0 97466 0 0 103240 0 0 120920 0 0 125560 0 0 149550 0 0 108490 0 0 152400 0 0 220900 0 0 134240 0 0 1771700 0 0 21 0 0 20 0 0 21 0 0 21 0 0 21 0 0 21 0 0 21 0 0 21 0 0 21 0 0 21 0 0 1409200000 1409200000 0 0 NaN 1779 1035 698 698 1448 1525 1636;1637;1638;1639;1640;1641;1642;1643;1644;1645;1646;1647 1806;1807;1808;1809;1810;1811;1812;1813;1814;1815;1816;1817;1818;1819;1820;1821;1822;1823;1824;1825;1826 1636 1808 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19035 1636 1808 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19035 1636 1808 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19035 Q14978 538 Q14978 Q14978 Nucleolar and coiled-body phosphoprotein 1 NOLC1 sp|Q14978|NOLC1_HUMAN Nucleolar and coiled-body phosphoprotein 1 OS=Homo sapiens GN=NOLC1 PE=1 SV=2 1 107.344 0.000341586 107.34 90.767 107.34 1 S DDSSEEEEEKLKGKGSPRPQAPKANGTSALT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX GS(1)PRPQAPK GS(107.34)PRPQAPK 2 3 -0.020607 182530 0 0 159160 0 0 172510 0 0 150270 0 0 132380 0 0 169570 0 0 147630 0 0 162360 0 0 165460 0 0 8422.1 0 0 172680 0 0 150300 0 0 173820 0 0 155140 0 0 136940 0 0 169030 0 0 150030 0 0 163390 0 0 162510 0 0 11688 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 707790000 707790000 0 0 NaN 1780 1035 538 538 1487;1624 1565;1711 1690;1850 1871;2062 1850 2062 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6753 1850 2062 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6753 1850 2062 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6753 Q14978 681 Q14978 Q14978 Nucleolar and coiled-body phosphoprotein 1 NOLC1 sp|Q14978|NOLC1_HUMAN Nucleolar and coiled-body phosphoprotein 1 OS=Homo sapiens GN=NOLC1 PE=1 SV=2 0.999942 46.9151 1.36819E-10 180.44 107.41 180.44 1 S KGKSFRHEKTKKKRGSYRGGSISVQVNSIKF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPX GS(1)YRGGSISVQVNSIK GS(46.92)Y(-46.92)RGGS(-47.06)IS(-47.35)VQVNS(-128.25)IK 2 3 -0.54141 7339.4 0 0 9102.2 0 0 7513.7 0 0 7399.3 0 0 9914.3 0 0 6791 0 0 8889 0 0 10525 0 0 8077.4 0 0 47345 0 0 6945.6 0 0 8588.8 0 0 7583.3 0 0 7691.5 0 0 9904.1 0 0 6970 0 0 9075.2 0 0 11839 0 0 8004.4 0 0 44825 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17211000 17211000 0 0 NaN 1781 1035 681 681 1649 1740 1881 2099 1881 2099 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15282 1881 2099 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15282 1881 2099 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15282 Q14978 397 Q14978 Q14978 Nucleolar and coiled-body phosphoprotein 1 NOLC1 sp|Q14978|NOLC1_HUMAN Nucleolar and coiled-body phosphoprotein 1 OS=Homo sapiens GN=NOLC1 PE=1 SV=2 1 86.4967 0.00479871 86.497 65.656 86.497 1 S GTTKNSSNKPAVTTKSPAVKPAAAPKQPVGG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPXXXXX S(1)PAVKPAAAPK S(86.5)PAVKPAAAPK 1 3 0.44893 21334 0 0 29837 0 0 26671 0 0 30630 0 0 20914 0 0 22443 0 0 22044 0 0 27292 0 0 34229 0 0 3283.5 0 0 20207 0 0 28190 0 0 26481 0 0 31270 0 0 21591 0 0 22928 0 0 22719 0 0 27287 0 0 33257 0 0 3723.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 31272000 31272000 0 0 NaN 1782 1035 397 397 4078 4348 4638 5151 4638 5151 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10226 4638 5151 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10226 4638 5151 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10226 Q14978 643 Q14978 Q14978 Nucleolar and coiled-body phosphoprotein 1 NOLC1 sp|Q14978|NOLC1_HUMAN Nucleolar and coiled-body phosphoprotein 1 OS=Homo sapiens GN=NOLC1 PE=1 SV=2 1 86.4048 0.000574122 107.52 76.092 86.405 1 S VREEEIEVDSRVADNSFDAKRGAAGDWGERA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX VADNS(1)FDAKR VADNS(86.4)FDAKR 5 2 -0.97508 43514 0 0 55576 0 0 45625 0 0 49361 0 0 34483 0 0 43248 0 0 41598 0 0 50354 0 0 54424 0 0 74828 0 0 41184 0 0 52466 0 0 45697 0 0 50963 0 0 35764 0 0 43852 0 0 42353 0 0 52488 0 0 53156 0 0 71625 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 35020000 35020000 0 0 NaN 1783 1035 643 643 5040;5041 5374;5375 5726;5727 6365;6366 5727 6366 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10647 5726 6365 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12857 5726 6365 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12857 Q14978 508 Q14978 Q14978 Nucleolar and coiled-body phosphoprotein 1 NOLC1 sp|Q14978|NOLC1_HUMAN Nucleolar and coiled-body phosphoprotein 1 OS=Homo sapiens GN=NOLC1 PE=1 SV=2 0.995369 23.3232 0.00500964 87.654 62.861 87.654 1 S KPQKVAGGAAPSKPASAKKGKAESSNSSSSD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPXXXXXXXXXXXXX VAGGAAPS(0.005)KPAS(0.995)AK VAGGAAPS(-23.32)KPAS(23.32)AK 12 3 0.12367 24933 0 0 25796 0 0 24184 0 0 25999 0 0 25131 0 0 25575 0 0 24494 0 0 27768 0 0 31152 0 0 5624.7 0 0 23590 0 0 24369 0 0 24406 0 0 26676 0 0 25444 0 0 25692 0 0 25146 0 0 27937 0 0 30455 0 0 5938.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28386000 28386000 0 0 NaN 1784 1035 508 508 5043 5377 5729 6368 5729 6368 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9827 5729 6368 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9827 5729 6368 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9827 Q14980 169 Q14980 Q14980 Nuclear mitotic apparatus protein 1 NUMA1 sp|Q14980|NUMA1_HUMAN Nuclear mitotic apparatus protein 1 OS=Homo sapiens GN=NUMA1 PE=1 SV=2 0.951512 12.9278 1.1161E-17 220.53 200.94 220.53 1 S APVPSTCSSTFPEELSPPSHQAKREIRFLEL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPXXXXXXXX APVPSTCSSTFPEELS(0.952)PPS(0.048)HQAK APVPS(-144.29)T(-145.01)CS(-134.35)S(-108.69)T(-89.26)FPEELS(12.93)PPS(-12.93)HQAK 16 4 -0.30881 4375.5 0 0 6440.2 0 0 5330.2 0 0 5947.8 0 0 6286.9 0 0 6052.6 0 0 7400.5 0 0 6810.3 0 0 6524.2 0 0 6073.8 0 0 4144 0 0 6081.1 0 0 5326.1 0 0 6138.7 0 0 6338.4 0 0 6083.1 0 0 7455.6 0 0 6984.8 0 0 6474.6 0 0 5876.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18972000 18972000 0 0 NaN 1785 1036 169 169 384 411 446 495 446 495 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15948 446 495 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15948 446 495 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15948 Q14980 1853 Q14980 Q14980 Nuclear mitotic apparatus protein 1 NUMA1 sp|Q14980|NUMA1_HUMAN Nuclear mitotic apparatus protein 1 OS=Homo sapiens GN=NUMA1 PE=1 SV=2 0.717907 4.89693 1.92208E-09 180.47 119.75 180.47 1 S TRSAPASQASLRATSSTQSLARLGSPDYGNS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX ATS(0.049)S(0.718)T(0.232)QSLAR AT(-32.34)S(-11.64)S(4.9)T(-4.9)QS(-47.85)LAR 4 2 -0.2991 22909 0 0 32749 0 0 24039 0 0 31926 0 0 40223 0 0 24177 0 0 39555 0 0 30931 0 0 30661 0 0 3413.6 0 0 21682 0 0 30932 0 0 24338 0 0 32707 0 0 39845 0 0 24670 0 0 40052 0 0 30868 0 0 30630 0 0 3930.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 49784000 49784000 0 0 NaN 1786 1036 1853 1853 541 575 616 688 616 688 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7152 616 688 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7152 616 688 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7152 Q14980 2062 Q14980 Q14980 Nuclear mitotic apparatus protein 1 NUMA1 sp|Q14980|NUMA1_HUMAN Nuclear mitotic apparatus protein 1 OS=Homo sapiens GN=NUMA1 PE=1 SV=2 1 67.4565 0.0140111 67.456 38.651 67.456 1 S SMAFSILNTPKKLGNSLLRRGASKKALSKAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX KLGNS(1)LLR KLGNS(67.46)LLR 5 3 0.6519 12169 0 0 10325 0 0 14126 0 0 8614.3 0 0 17905 0 0 12508 0 0 14911 0 0 12623 0 0 9439.3 0 0 5184.1 0 0 11522 0 0 9743.5 0 0 14152 0 0 9011.9 0 0 17899 0 0 12375 0 0 15172 0 0 12813 0 0 9545.8 0 0 5173.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16629000 16629000 0 0 NaN 1787 1036 2062 2062 2115 2236 2409 2685 2409 2685 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14630 2409 2685 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14630 2409 2685 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14630 Q14980 1225 Q14980 Q14980 Nuclear mitotic apparatus protein 1 NUMA1 sp|Q14980|NUMA1_HUMAN Nuclear mitotic apparatus protein 1 OS=Homo sapiens GN=NUMA1 PE=1 SV=2 0.99815 28.4303 0.000105428 104.33 83.075 104.33 1 S KAQVARGRQEAERKNSLISSLEEEVSILNRQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX KNS(0.998)LIS(0.001)SLEEEVSILNR KNS(28.43)LIS(-28.43)S(-33.79)LEEEVS(-86.34)ILNR 3 3 -0.081335 14058 0 0 18724 0 0 13997 0 0 18151 0 0 21204 0 0 17612 0 0 29901 0 0 21272 0 0 15928 0 0 50306 0 0 13302 0 0 17684 0 0 14203 0 0 18664 0 0 21203 0 0 17818 0 0 29636 0 0 22711 0 0 16308 0 0 47862 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 113080000 113080000 0 0 NaN 1788 1036 1225 1225 2148 2270 2444 2721 2444 2721 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23793 2444 2721 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23793 2444 2721 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23793 Q14980 1862 Q14980 Q14980 Nuclear mitotic apparatus protein 1 NUMA1 sp|Q14980|NUMA1_HUMAN Nuclear mitotic apparatus protein 1 OS=Homo sapiens GN=NUMA1 PE=1 SV=2 0.99985 38.3023 1.93381E-05 128.18 104.31 128.18 1 S SLRATSSTQSLARLGSPDYGNSALLSLPGYR X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP LGS(1)PDYGNSALLSLPGYRPTTR LGS(38.3)PDY(-56.13)GNS(-38.3)ALLS(-86.49)LPGY(-113.86)RPT(-108.8)T(-108.8)R 3 3 1.2647 5939.7 0 0 9029.8 0 0 6376.2 0 0 7628.7 0 0 8500.8 0 0 6812.5 0 0 9965.3 0 0 8847.7 0 0 7480.8 0 0 24906 0 0 5622.1 0 0 8522.2 0 0 6424.1 0 0 7905.3 0 0 8519.5 0 0 6937.4 0 0 10005 0 0 9546.5 0 0 7486.7 0 0 23657 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21036000 21036000 0 0 NaN 1789 1036 1862 1862 2383 2520 2713 3031 2713 3031 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20801 2713 3031 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20801 2713 3031 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20801 Q14980 1769 Q14980 Q14980 Nuclear mitotic apparatus protein 1 NUMA1 sp|Q14980|NUMA1_HUMAN Nuclear mitotic apparatus protein 1 OS=Homo sapiens GN=NUMA1 PE=1 SV=2 0.960858 13.926 4.68244E-08 167.51 147.48 167.51 1 S EPASPISQRLPPKVESLESLYFTPIPARSQA X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPXXX LPPKVES(0.961)LES(0.039)LYFTPIPAR LPPKVES(13.93)LES(-13.93)LY(-60.94)FT(-36.19)PIPAR 7 3 -0.63291 17594 0 0 24526 0 0 15370 0 0 22017 0 0 72252 0 0 18960 0 0 71912 0 0 45661 0 0 25997 0 0 121350 0 0 16640 0 0 23155 0 0 16300 0 0 22711 0 0 69914 0 0 19704 0 0 71960 0 0 48423 0 0 27598 0 0 115320 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 51048000 51048000 0 0 NaN 1790 1036 1769 1769 2503 2643 2838 3166 2838 3166 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23446 2838 3166 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23446 2838 3166 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23446 Q14980 271 Q14980 Q14980 Nuclear mitotic apparatus protein 1 NUMA1 sp|Q14980|NUMA1_HUMAN Nuclear mitotic apparatus protein 1 OS=Homo sapiens GN=NUMA1 PE=1 SV=2 1 101.888 0.000676181 101.89 73.49 101.89 1 S QRIDRLALLNEKQAASPLEPKELEELRDKNE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX QAAS(1)PLEPK QAAS(101.89)PLEPK 4 2 0.30195 16099 0 0 20998 0 0 17088 0 0 21295 0 0 18154 0 0 16320 0 0 18172 0 0 18079 0 0 20440 0 0 10769 0 0 15237 0 0 19838 0 0 17163 0 0 21767 0 0 18362 0 0 16623 0 0 18559 0 0 18391 0 0 20072 0 0 10559 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10145000 10145000 0 0 NaN 1791 1036 271 271 2992 3171 3394 3764 3394 3764 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11160 3394 3764 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11160 3394 3764 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11160 Q14980 1969 Q14980 Q14980 Nuclear mitotic apparatus protein 1 NUMA1 sp|Q14980|NUMA1_HUMAN Nuclear mitotic apparatus protein 1 OS=Homo sapiens GN=NUMA1 PE=1 SV=2 1 67.2876 4.10378E-05 119.75 101.39 119.75 1 S EEMKTGDPQETLRRASMQPIQIAEGTGITTR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RAS(1)MQPIQIAEGTGITTR RAS(67.29)MQPIQIAEGT(-67.29)GIT(-80.77)T(-79.46)R 3 3 -0.8066 6656 0 0 7436.2 0 0 5975.8 0 0 7832.2 0 0 9599.9 0 0 5635.5 0 0 10185 0 0 8613.4 0 0 7661.4 0 0 8507.8 0 0 6295.7 0 0 7027 0 0 6101.9 0 0 7982.4 0 0 9533.9 0 0 5800.2 0 0 10270 0 0 8780.8 0 0 7666.5 0 0 8210.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13063000 13063000 0 0 NaN 1792 1036 1969 1969 3193 3387 3620 4015 3620 4015 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16415 3620 4015 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16415 3620 4015 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16415 Q14980 1757 Q14980 Q14980 Nuclear mitotic apparatus protein 1 NUMA1 sp|Q14980|NUMA1_HUMAN Nuclear mitotic apparatus protein 1 OS=Homo sapiens GN=NUMA1 PE=1 SV=2 0.998476 28.206 3.69501E-05 118.9 97.667 118.9 1 S PRTQPDGTSVPGEPASPISQRLPPKVESLES X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXPPPPPPPPPPPPPPPPPPPXXXXXXXXXX TQPDGTSVPGEPAS(0.998)PIS(0.002)QR T(-61.66)QPDGT(-56.12)S(-49.2)VPGEPAS(28.21)PIS(-28.21)QR 14 3 -0.031491 13589 0 0 12808 0 0 14348 0 0 12419 0 0 14106 0 0 13385 0 0 14647 0 0 13029 0 0 15082 0 0 8642.1 0 0 12862 0 0 12097 0 0 14402 0 0 12791 0 0 14337 0 0 13385 0 0 14896 0 0 13344 0 0 14863 0 0 8439.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 442490000 442490000 0 0 NaN 1793 1036 1757 1757 4877 5202 5541 6159 5541 6159 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11279 5541 6159 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11279 5541 6159 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11279 Q14993 81 Q14993 Q14993 Collagen alpha-1(XIX) chain COL19A1 sp|Q14993|COJA1_HUMAN Collagen alpha-1(XIX) chain OS=Homo sapiens GN=COL19A1 PE=1 SV=3 1 82.645 0.0118669 82.645 25.729 82.645 1 S RRAFCESDKTCFKLGSALLIRDTIKIFPKGL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX LGS(1)ALLIR LGS(82.64)ALLIR 3 2 -0.29657 16812 0 0 4067.2 0 0 16606 0 0 3719.8 0 0 6805.4 0 0 14163 0 0 6497.1 0 0 8434.3 0 0 4289.6 0 0 7324.7 0 0 15907 0 0 3840.2 0 0 16613 0 0 4008.4 0 0 7478.4 0 0 13672 0 0 6567.9 0 0 8902.9 0 0 4326.2 0 0 7092.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14693000 14693000 0 0 NaN 1794 1037 81 81 2380 2517 2709 3027 2709 3027 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20154 2709 3027 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20154 2709 3027 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20154 Q14C86 757 Q14C86 Q14C86 GTPase-activating protein and VPS9 domain-containing protein 1 GAPVD1 sp|Q14C86|GAPD1_HUMAN GTPase-activating protein and VPS9 domain-containing protein 1 OS=Homo sapiens GN=GAPVD1 PE=1 SV=2 0.400703 0.860847 7.90377E-18 214.78 195.53 214.78 S SGLGSTSDDTDVREVSSRPSTPGLSVVSGIS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP EVS(0.401)S(0.329)RPS(0.135)T(0.135)PGLSVVSGISATSEDIPNKIEDLR EVS(0.86)S(-0.86)RPS(-4.72)T(-4.72)PGLS(-34.83)VVS(-84.8)GIS(-130.24)AT(-141.47)S(-147.5)EDIPNKIEDLR 3 4 0.6731 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1795 1038 757 757 1223 1286;1287 1386 1537 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22722 1386 1537 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22722 1386 1537 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22722 Q14C86 758 Q14C86 Q14C86 GTPase-activating protein and VPS9 domain-containing protein 1 GAPVD1 sp|Q14C86|GAPD1_HUMAN GTPase-activating protein and VPS9 domain-containing protein 1 OS=Homo sapiens GN=GAPVD1 PE=1 SV=2 0.537948 0.663537 2.05641E-08 169.15 144.28 169.15 2 S GLGSTSDDTDVREVSSRPSTPGLSVVSGISA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP EVS(0.462)S(0.538)RPS(0.246)T(0.754)PGLSVVSGISATSEDIPNKIEDLR EVS(-0.66)S(0.66)RPS(-4.87)T(4.87)PGLS(-38.52)VVS(-60.14)GIS(-73.9)AT(-81.57)S(-88.66)EDIPNKIEDLR 4 4 -0.20446 0 4677.9 0 0 5947.1 0 0 5426.4 0 0 5327 0 0 4344.9 0 0 4233.6 0 0 1895.9 0 0 6767.5 0 0 7115.9 0 0 117990 0 0 4429.3 0 0 5614.4 0 0 5403.2 0 0 5489.9 0 0 4443.3 0 0 4546.4 0 0 2190.4 0 0 10245 0 0 6799.9 0 0 111260 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 984360000 0 984360000 0 NaN 1796 1038 758 758 1223 1286;1287 1387 1538 1387 1538 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23101 1387 1538 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23101 1387 1538 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23101 Q14C86 900 Q14C86 Q14C86 GTPase-activating protein and VPS9 domain-containing protein 1 GAPVD1 sp|Q14C86|GAPD1_HUMAN GTPase-activating protein and VPS9 domain-containing protein 1 OS=Homo sapiens GN=GAPVD1 PE=1 SV=2 0.619957 2.21992 4.27899E-07 156.88 120.89 156.88 1 S EAFKQRHSYPERLVRSRSSDIVSSVRRPMSD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPXXXXX S(0.62)RS(0.372)S(0.008)DIVSSVR S(2.22)RS(-2.22)S(-18.79)DIVS(-77.99)S(-101.24)VR 1 3 0.40533 16417 0 0 20925 0 0 16333 0 0 20531 0 0 15324 0 0 16673 0 0 16603 0 0 17660 0 0 22730 0 0 4632.5 0 0 15534 0 0 19765 0 0 16441 0 0 21042 0 0 15634 0 0 16906 0 0 17007 0 0 17816 0 0 22168 0 0 4770.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 99392000 99392000 0 0 NaN 1797 1038 900 900 4303 4588 4889 5430 4889 5430 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8746 4889 5430 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8746 4889 5430 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8746 Q14C86 902 Q14C86 Q14C86 GTPase-activating protein and VPS9 domain-containing protein 1 GAPVD1 sp|Q14C86|GAPD1_HUMAN GTPase-activating protein and VPS9 domain-containing protein 1 OS=Homo sapiens GN=GAPVD1 PE=1 SV=2 0.941807 12.0959 0.000563455 108.1 82 108.1 1 S FKQRHSYPERLVRSRSSDIVSSVRRPMSDPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(0.942)S(0.058)DIVSSVR S(12.1)S(-12.1)DIVS(-41.54)S(-60.19)VR 1 2 0.16703 25284 0 0 24665 0 0 26508 0 0 22966 0 0 24576 0 0 25296 0 0 22283 0 0 26936 0 0 26385 0 0 6484.6 0 0 23930 0 0 23290 0 0 26594 0 0 23722 0 0 25025 0 0 25284 0 0 22905 0 0 27151 0 0 25861 0 0 6729.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 77569000 77569000 0 0 NaN 1798 1038 902 902 4303;4329 4588;4615 4917 5461 4917 5461 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11288 4917 5461 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11288 4917 5461 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11288 Q14CB8 422 Q14CB8 Q14CB8 Rho GTPase-activating protein 19 ARHGAP19 sp|Q14CB8|RHG19_HUMAN Rho GTPase-activating protein 19 OS=Homo sapiens GN=ARHGAP19 PE=1 SV=1 0.998867 29.4515 0.0100826 80.312 24.886 74.173 1 S REPSTSQVQKRARSRSFSGLIKRKVLGNQMM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX S(0.999)FS(0.001)GLIK S(29.45)FS(-29.45)GLIK 1 2 0.093745 56814 0 0 32449 0 0 59636 0 0 33313 0 0 20119 0 0 63819 0 0 22879 0 0 40972 0 0 35099 0 0 27073 0 0 53771 0 0 30658 0 0 59409 0 0 34642 0 0 22801 0 0 62372 0 0 23491 0 0 42799 0 0 34114 0 0 26441 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 55628000 55628000 0 0 NaN 1799 1039 422 422 3757;4281 3997;4561 4261;4861 4736;5395 4261 4736 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19485 4861 5395 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15754 4861 5395 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15754 Q14CW9 163 Q14CW9 Q14CW9 Ataxin-7-like protein 3 ATXN7L3 sp|Q14CW9|AT7L3_HUMAN Ataxin-7-like protein 3 OS=Homo sapiens GN=ATXN7L3 PE=1 SV=1 0.999896 39.8408 0.0278816 59.68 38.741 59.68 1 S SEKKAKKRKSDKNPNSPRRSKSLKHKNGELS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX KSDKNPNS(1)PR KS(-39.84)DKNPNS(39.84)PR 8 3 0.49255 8491.2 0 0 10027 0 0 7873 0 0 9766.5 0 0 9670.7 0 0 9666.8 0 0 9377.1 0 0 9252.3 0 0 9203.5 0 0 2078.2 0 0 8032.5 0 0 9470.4 0 0 7984.6 0 0 10042 0 0 9703.4 0 0 9692.7 0 0 9554.4 0 0 9359.4 0 0 9088.5 0 0 2171 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13728000 13728000 0 0 NaN 1800 1040 163 163 2209 2335 2516 2809 2516 2809 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5888 2516 2809 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5888 2516 2809 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5888 Q15003 70 Q15003 Q15003 Condensin complex subunit 2 NCAPH sp|Q15003|CND2_HUMAN Condensin complex subunit 2 OS=Homo sapiens GN=NCAPH PE=1 SV=3 1 78.8694 5.23011E-05 128.29 118.37 128.29 1 S FPQNDDEKERLQRRRSRVFDLQFSTDSPRLL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPXX S(1)RVFDLQFSTDSPR S(78.87)RVFDLQFS(-78.87)T(-81.81)DS(-95.67)PR 1 3 0.70748 18338 0 0 15311 0 0 16198 0 0 14081 0 0 13838 0 0 17676 0 0 16282 0 0 17457 0 0 13188 0 0 5473.5 0 0 17345 0 0 14457 0 0 16409 0 0 14590 0 0 14213 0 0 17565 0 0 16371 0 0 17684 0 0 13144 0 0 5558 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17651000 17651000 0 0 NaN 1801 1041 70 70 4321 4607 4909 5453 4909 5453 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18559 4909 5453 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18559 4909 5453 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18559 Q15007 306 Q15007 Q15007 Pre-mRNA-splicing regulator WTAP WTAP sp|Q15007|FL2D_HUMAN Pre-mRNA-splicing regulator WTAP OS=Homo sapiens GN=WTAP PE=1 SV=2 0.993273 21.6922 6.66642E-08 166.27 153.42 166.27 1 S GFHREGNTTEDDFPSSPGNGNKSSNSSEERT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPXXXXXXXXX EGNTTEDDFPS(0.007)S(0.993)PGNGNK EGNT(-103.14)T(-97.01)EDDFPS(-21.69)S(21.69)PGNGNK 12 3 -0.49793 11379 0 0 13222 0 0 13229 0 0 14300 0 0 12243 0 0 12872 0 0 11889 0 0 13661 0 0 14856 0 0 12390 0 0 10775 0 0 12497 0 0 13202 0 0 14594 0 0 12480 0 0 13000 0 0 12200 0 0 14046 0 0 14533 0 0 11983 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 59228000 59228000 0 0 NaN 1802 1042 306 306 971 1025 1110 1225 1110 1225 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11514 1110 1225 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11514 1110 1225 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11514 Q15014 69 Q15014 Q15014 Mortality factor 4-like protein 2 MORF4L2 sp|Q15014|MO4L2_HUMAN Mortality factor 4-like protein 2 OS=Homo sapiens GN=MORF4L2 PE=1 SV=1 0.512999 0.227498 0.0367217 50.305 32.979 50.305 1 S ALPGRWGGRSAENPPSGSVRKTRKNKQKTPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX SAENPPS(0.513)GS(0.487)VRK S(-34.46)AENPPS(0.23)GS(-0.23)VRK 7 3 1.592 23497 0 0 24838 0 0 21846 0 0 22775 0 0 21393 0 0 23276 0 0 23458 0 0 23711 0 0 23599 0 0 1925.1 0 0 22228 0 0 23452 0 0 22091 0 0 23519 0 0 21766 0 0 23318 0 0 23783 0 0 23825 0 0 23279 0 0 2361.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26830000 26830000 0 0 NaN 1803 1043 69 69 3577 3800 4053 4508 4053 4508 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7475 4053 4508 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7475 4053 4508 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7475 Q15019 218 Q15019 Q15019 Septin-2 SEPT2 sp|Q15019|SEPT2_HUMAN Septin-2 OS=Homo sapiens GN=SEPT2 PE=1 SV=1 1 96.9247 4.3093E-12 210.66 195.6 210.66 1 S IEEHNIKIYHLPDAESDEDEDFKEQTRLLKA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPPXXXX IYHLPDAES(1)DEDEDFKEQTR IY(-128.3)HLPDAES(96.92)DEDEDFKEQT(-96.92)R 9 4 0.75118 20446 0 0 17766 0 0 21610 0 0 16502 0 0 29042 0 0 22253 0 0 30232 0 0 23022 0 0 17344 0 0 19107 0 0 19352 0 0 16776 0 0 21786 0 0 17113 0 0 29038 0 0 22095 0 0 30364 0 0 23639 0 0 17660 0 0 18524 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 29715000 29715000 0 0 NaN 1804 1044 218 218 1984 2098 2262 2525;2526;2527 2262 2526 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16567 2262 2526 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16567 2262 2526 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16567 Q15022 546 Q15022 Q15022 Polycomb protein SUZ12 SUZ12 sp|Q15022|SUZ12_HUMAN Polycomb protein SUZ12 OS=Homo sapiens GN=SUZ12 PE=1 SV=3 0.999999 60.4186 3.13929E-05 121.93 108.61 121.93 1 S CRPKRTKASMSEFLESEDGEVEQQRTYSSGH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPXXXXXX ASMSEFLES(1)EDGEVEQQR AS(-69.55)MS(-60.42)EFLES(60.42)EDGEVEQQR 9 3 0.83425 8775.7 0 0 8073.5 0 0 10650 0 0 7912.8 0 0 8333.1 0 0 11451 0 0 10221 0 0 8661.6 0 0 9364 0 0 18789 0 0 8311.1 0 0 7625.8 0 0 10592 0 0 8191.2 0 0 8619.1 0 0 11320 0 0 10290 0 0 9362.4 0 0 9275.8 0 0 17893 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9302000 9302000 0 0 NaN 1805 1045 546 546 476 506 545 609 545 609 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18364 545 609 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18364 545 609 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18364 Q15025 266 Q15025 Q15025 TNFAIP3-interacting protein 1 TNIP1 sp|Q15025|TNIP1_HUMAN TNFAIP3-interacting protein 1 OS=Homo sapiens GN=TNIP1 PE=1 SV=2 0.999972 45.5406 0.000242319 104.7 75.999 104.7 1 S LMSNGNKEGASGRPGSPKMEGTGKKAVAGQQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX EGASGRPGS(1)PK EGAS(-45.54)GRPGS(45.54)PK 9 2 0.27308 10385 0 0 6807.7 0 0 10073 0 0 6701.4 0 0 13146 0 0 9641 0 0 14693 0 0 11089 0 0 7197.6 0 0 2332.2 0 0 9825.5 0 0 6430.4 0 0 10202 0 0 6934.5 0 0 13174 0 0 9555 0 0 14676 0 0 11137 0 0 7419.8 0 0 2452.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13596000 13596000 0 0 NaN 1806 1046 266 266 948 1002 1087 1200 1087 1200 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6059 1087 1200 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6059 1087 1200 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6059 Q15032 381 Q15032 Q15032 R3H domain-containing protein 1 R3HDM1 sp|Q15032|R3HD1_HUMAN R3H domain-containing protein 1 OS=Homo sapiens GN=R3HDM1 PE=1 SV=3 0.977712 17.9724 6.51271E-16 221.77 186.57 221.77 1 S DSSLRNLKPAVTKASSFSGISVLTRGDSSGS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX AS(0.016)S(0.978)FS(0.007)GISVLTR AS(-17.97)S(17.97)FS(-21.65)GIS(-96.53)VLT(-153.66)R 3 2 -0.19668 18710 0 0 14316 0 0 17855 0 0 14532 0 0 15166 0 0 18562 0 0 16289 0 0 17291 0 0 14594 0 0 14129 0 0 17701 0 0 13525 0 0 17997 0 0 14973 0 0 15563 0 0 18437 0 0 16481 0 0 17820 0 0 14472 0 0 13704 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 64187000 64187000 0 0 NaN 1807 1048 381 381 497 528 568 633 568 633 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19569 568 633 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19569 568 633 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19569 Q15032;Q9UBL0 282;280 Q15032 Q15032 R3H domain-containing protein 1;cAMP-regulated phosphoprotein 21 R3HDM1;ARPP21 sp|Q15032|R3HD1_HUMAN R3H domain-containing protein 1 OS=Homo sapiens GN=R3HDM1 PE=1 SV=3;sp|Q9UBL0|ARP21_HUMAN cAMP-regulated phosphoprotein 21 OS=Homo sapiens GN=ARPP21 PE=1 SV=2 0.738117 4.50019 0.0386852 54.784 14.935 54.784 1 S DNQMRIRLKDDRRSKSIEEREEEYQRARDRI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX S(0.262)KS(0.738)IEER S(-4.5)KS(4.5)IEER 3 2 2.5722 18652 0 0 15895 0 0 18104 0 0 17683 0 0 15588 0 0 17662 0 0 15636 0 0 17461 0 0 17111 0 0 3564.4 0 0 17648 0 0 15025 0 0 18230 0 0 18047 0 0 15969 0 0 17709 0 0 15954 0 0 17630 0 0 16821 0 0 3760.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16723000 16723000 0 0 NaN 1808 1048 282 282 3900 4156 4435 4929 4435 4929 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7119 4435 4929 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7119 4435 4929 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7119 Q15036 437 Q15036 Q15036 Sorting nexin-17 SNX17 sp|Q15036|SNX17_HUMAN Sorting nexin-17 OS=Homo sapiens GN=SNX17 PE=1 SV=1 0.738576 5.62427 0.0241427 54.812 14.933 54.812 1 S PDATRESMVKLSSKLSAVSLRGIGSPSTDAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX LS(0.057)S(0.202)KLS(0.739)AVS(0.002)LR LS(-11.12)S(-5.62)KLS(5.62)AVS(-25.49)LR 6 3 -2.7544 10186 0 0 10108 0 0 9533 0 0 11587 0 0 8058.5 0 0 10004 0 0 7701.8 0 0 9672.3 0 0 11578 0 0 1851.3 0 0 9636.1 0 0 9556.7 0 0 9618 0 0 11782 0 0 8263.4 0 0 10097 0 0 7963.1 0 0 9770.6 0 0 11260 0 0 1967.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21244000 21244000 0 0 NaN 1809 1049 437 437 2590 2736 2935 3269 2935 3269 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17581 2935 3269 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17581 2935 3269 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17581 Q15036 409 Q15036 Q15036 Sorting nexin-17 SNX17 sp|Q15036|SNX17_HUMAN Sorting nexin-17 OS=Homo sapiens GN=SNX17 PE=1 SV=1 0.996326 24.3329 7.16135E-05 133.48 94.844 133.48 1 S KMLRRRVGGTLRRSDSQQAVKSPPLLESPDA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX RS(0.004)DS(0.996)QQAVK RS(-24.33)DS(24.33)QQAVK 4 3 0.61074 18864 0 0 15829 0 0 19782 0 0 16541 0 0 13434 0 0 17434 0 0 12760 0 0 14765 0 0 18472 0 0 3301 0 0 17853 0 0 14957 0 0 19787 0 0 16955 0 0 14003 0 0 17408 0 0 13177 0 0 15013 0 0 17984 0 0 3450 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 33503000 33503000 0 0 NaN 1810 1049 409 409 3467 3683 3929 4364 3929 4364 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6069 3929 4364 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6069 3929 4364 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6069 Q15036 336 Q15036 Q15036 Sorting nexin-17 SNX17 sp|Q15036|SNX17_HUMAN Sorting nexin-17 OS=Homo sapiens GN=SNX17 PE=1 SV=1 0.997069 25.3576 1.64195E-10 183.17 145.49 183.17 1 S WRVTSSVPLPSGSTSSPGRGRGEVRLELAFE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPXXXXXXXXXXXX VTSSVPLPSGSTS(0.003)S(0.997)PGR VT(-144.8)S(-138.25)S(-126.65)VPLPS(-51.22)GS(-49.92)T(-50.01)S(-25.36)S(25.36)PGR 14 2 -0.50682 11725 0 0 12543 0 0 11066 0 0 11928 0 0 9003.2 0 0 12762 0 0 9330.7 0 0 12900 0 0 13386 0 0 10361 0 0 11093 0 0 11846 0 0 11156 0 0 12298 0 0 9266.7 0 0 12776 0 0 9593.2 0 0 13246 0 0 13036 0 0 10054 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 63731000 63731000 0 0 NaN 1811 1049 336 336 5301 5648 6020 6687 6020 6687 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14208 6020 6687 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14208 6020 6687 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14208 Q15047 1066 Q15047 Q15047 Histone-lysine N-methyltransferase SETDB1 SETDB1 sp|Q15047|SETB1_HUMAN Histone-lysine N-methyltransferase SETDB1 OS=Homo sapiens GN=SETDB1 PE=1 SV=1 0.999999 61.0795 9.0223E-05 118.37 102.39 118.37 1 S MSVVTESSRNYGYNPSPVKPEGLRRPPSKTS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPXXXXXXX NYGYNPS(1)PVKPEGLR NY(-74.96)GY(-61.08)NPS(61.08)PVKPEGLR 7 3 -0.4267 22357 0 0 20159 0 0 22001 0 0 16518 0 0 11608 0 0 24737 0 0 14532 0 0 19607 0 0 18950 0 0 15757 0 0 21154 0 0 19023 0 0 22053 0 0 17315 0 0 12439 0 0 24394 0 0 14773 0 0 20341 0 0 18511 0 0 15291 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 71143000 71143000 0 0 NaN 1812 1050 1066 1066 2967 3146 3368 3733 3368 3733 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14131 3368 3733 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14131 3368 3733 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14131 Q15052 684 Q15052 Q15052 Rho guanine nucleotide exchange factor 6 ARHGEF6 sp|Q15052|ARHG6_HUMAN Rho guanine nucleotide exchange factor 6 OS=Homo sapiens GN=ARHGEF6 PE=1 SV=2 1 118.455 0.000103002 118.46 92.091 118.46 1 S SANFQQGHGSSTRKDSIPQVLLPEEEKLIIE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX KDS(1)IPQVLLPEEEK KDS(118.46)IPQVLLPEEEK 3 4 0.48809 4976 0 0 1581.9 0 0 5170.6 0 0 1723.1 0 0 9282.4 0 0 5356.3 0 0 9235.1 0 0 6122.4 0 0 1888.7 0 0 2851.9 0 0 4709.3 0 0 1495.2 0 0 5245.5 0 0 1818.9 0 0 9169.4 0 0 5221.7 0 0 9201.7 0 0 6197.5 0 0 2175.1 0 0 2827.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22094000 22094000 0 0 NaN 1813 1051 684 684 2033 2151 2318 2585 2318 2585 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19268 2318 2585 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19268 2318 2585 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19268 Q15052 640 Q15052 Q15052 Rho guanine nucleotide exchange factor 6 ARHGEF6 sp|Q15052|ARHG6_HUMAN Rho guanine nucleotide exchange factor 6 OS=Homo sapiens GN=ARHGEF6 PE=1 SV=2 1 64.8331 0.000122171 124.25 91.393 124.25 1 S TMKKFLHKRKTERKPSEEEYVIRKSTAALEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX KPS(1)EEEYVIR KPS(64.83)EEEY(-64.83)VIR 3 3 -0.13727 27914 0 0 12624 0 0 29691 0 0 12206 0 0 44358 0 0 28124 0 0 53915 0 0 31562 0 0 12676 0 0 4104.3 0 0 26421 0 0 11923 0 0 29992 0 0 12814 0 0 44245 0 0 27531 0 0 53293 0 0 31649 0 0 14257 0 0 4595.1 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 127280000 127280000 0 0 NaN 1814 1051 640 640 2163;2164 2285;2286 2459;2460 2739;2740 2459 2739 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13124 2459 2739 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13124 2459 2739 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13124 Q15052 225 Q15052 Q15052 Rho guanine nucleotide exchange factor 6 ARHGEF6 sp|Q15052|ARHG6_HUMAN Rho guanine nucleotide exchange factor 6 OS=Homo sapiens GN=ARHGEF6 PE=1 SV=2 0.999987 51.4537 0.00241212 94.538 71.162 94.538 1 S PSNYVREIKSSERPLSPKAVKGFETAPLTKN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX SSERPLS(1)PK S(-51.45)S(-52.5)ERPLS(51.45)PK 7 3 0.049182 59741 0 0 13773 0 0 65617 0 0 16212 0 0 57256 0 0 61662 0 0 58976 0 0 46671 0 0 16069 0 0 7345 0 0 56552 0 0 13025 0 0 65636 0 0 17228 0 0 58581 0 0 59604 0 0 58775 0 0 47617 0 0 17676 0 0 7996.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 319150000 319150000 0 0 NaN 1815 1051 225 225 4338 4624 4927 5471 4927 5471 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8688 4927 5471 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8688 4927 5471 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8688 Q15052 124 Q15052 Q15052 Rho guanine nucleotide exchange factor 6 ARHGEF6 sp|Q15052|ARHG6_HUMAN Rho guanine nucleotide exchange factor 6 OS=Homo sapiens GN=ARHGEF6 PE=1 SV=2 0.697382 6.65904 8.33203E-26 284.82 256.48 284.82 1 S ATEDQLSERPCGRSSSLSAANTSQTNPQGAV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.151)S(0.151)S(0.697)LS(0.002)AANTSQTNPQGAVSSTVSGLQR S(-6.66)S(-6.66)S(6.66)LS(-26.4)AANT(-96.66)S(-126.15)QT(-180.89)NPQGAVS(-262.41)S(-266.21)T(-269.74)VS(-278.69)GLQR 3 3 -0.5585 15533 0 0 10251 0 0 17854 0 0 10966 0 0 10380 0 0 16096 0 0 10710 0 0 12761 0 0 11690 0 0 12706 0 0 14707 0 0 9687.9 0 0 17754 0 0 11299 0 0 10980 0 0 15887 0 0 10913 0 0 13312 0 0 11493 0 0 12259 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 44867000 44867000 0 0 NaN 1816 1051 124 124 4434 4725 5029 5578 5029 5578 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15308 5029 5578 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15308 5029 5578 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15308 Q15054 458 Q15054 Q15054 DNA polymerase delta subunit 3 POLD3 sp|Q15054|DPOD3_HUMAN DNA polymerase delta subunit 3 OS=Homo sapiens GN=POLD3 PE=1 SV=2 0.703144 3.74498 0.000209766 121.45 95.037 121.45 1 S PKKGTAALGKANRQVSITGFFQRK_______ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX QVS(0.703)IT(0.297)GFFQR QVS(3.74)IT(-3.74)GFFQR 3 2 -0.17609 19973 0 0 7021 0 0 19286 0 0 6142.2 0 0 9530.8 0 0 19810 0 0 10395 0 0 11411 0 0 7243 0 0 53069 0 0 18897 0 0 6627.5 0 0 19342 0 0 6579.9 0 0 10257 0 0 19241 0 0 10454 0 0 13371 0 0 7280.4 0 0 50235 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21394000 21394000 0 0 NaN 1817 1052 458 458 3169 3362 3594 3984 3594 3984 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21919 3594 3984 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21919 3594 3984 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21919 Q15054 307 Q15054 Q15054 DNA polymerase delta subunit 3 POLD3 sp|Q15054|DPOD3_HUMAN DNA polymerase delta subunit 3 OS=Homo sapiens GN=POLD3 PE=1 SV=2 0.997014 25.4779 0.00010742 114.46 98.695 114.46 1 S KVLQKEKKRGKRVALSDDETKETENMRKKRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPXXXX VALS(0.997)DDET(0.003)KETENMR VALS(25.48)DDET(-25.48)KET(-37.89)ENMR 4 3 -0.727 35963 0 0 20009 0 0 34923 0 0 21076 0 0 23917 0 0 36366 0 0 23875 0 0 28057 0 0 20534 0 0 22613 0 0 34026 0 0 18908 0 0 35091 0 0 21821 0 0 24917 0 0 35708 0 0 24214 0 0 29147 0 0 20403 0 0 21942 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 46395000 46395000 0 0 NaN 1818 1052 307 307 5046 5380 5732 6371 5732 6371 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13092 5732 6371 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13092 5732 6371 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13092 Q15056 21 Q15056 Q15056 Eukaryotic translation initiation factor 4H EIF4H sp|Q15056|IF4H_HUMAN Eukaryotic translation initiation factor 4H OS=Homo sapiens GN=EIF4H PE=1 SV=5 1 63.4934 0.0032331 91.845 71.515 91.845 1 S TYDDRAYSSFGGGRGSRGSAGGHGSRSQKEL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPXXXXXXXXXXXXXX AYSSFGGGRGS(1)R AY(-91.78)S(-77.67)S(-63.49)FGGGRGS(63.49)R 11 3 0.53894 24382 0 0 41291 0 0 23149 0 0 36271 0 0 21293 0 0 25074 0 0 24505 0 0 27597 0 0 40741 0 0 1713.4 0 0 23067 0 0 38977 0 0 23364 0 0 37368 0 0 21779 0 0 25668 0 0 25235 0 0 27636 0 0 39511 0 0 2252.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 173280000 173280000 0 0 NaN 1819 1053 21 21 592 631 672 747 672 747 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8732 672 747 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8732 672 747 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8732 Q15057 379 Q15057 Q15057 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 ACAP2 sp|Q15057|ACAP2_HUMAN Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=ACAP2 PE=1 SV=3 0.674978 4.50826 4.3311E-07 153.08 125.43 153.08 1 S YREKGDESEKLDKKSSPSTGSLDSGNESKEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX KS(0.239)S(0.675)PS(0.085)T(0.001)GSLDSGNESK KS(-4.51)S(4.51)PS(-9)T(-27.91)GS(-53.91)LDS(-90.43)GNES(-113.75)K 3 3 -0.45692 18457 0 0 19151 0 0 20957 0 0 21842 0 0 17292 0 0 20321 0 0 19476 0 0 21626 0 0 23985 0 0 38803 0 0 17474 0 0 18107 0 0 20918 0 0 22238 0 0 17800 0 0 20526 0 0 19844 0 0 22811 0 0 23475 0 0 37038 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21345000 21345000 0 0 NaN 1820 1054 379 379 2234 2362 2543 2840 2543 2840 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9312 2543 2840 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9312 2543 2840 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9312 Q15057 521 Q15057 Q15057 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 ACAP2 sp|Q15057|ACAP2_HUMAN Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=ACAP2 PE=1 SV=3 0.971949 15.5734 0.000108709 118.21 94.019 118.21 1 S KYVERKFVDKYSISLSPPEQQKKFVSKSSEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPXXXXXXXX YS(0.001)IS(0.027)LS(0.972)PPEQQKK Y(-49.18)S(-29.44)IS(-15.57)LS(15.57)PPEQQKK 6 3 0.86082 17276 0 0 16081 0 0 17363 0 0 15360 0 0 11445 0 0 19420 0 0 11304 0 0 15888 0 0 18551 0 0 11092 0 0 16348 0 0 15187 0 0 17406 0 0 15881 0 0 11969 0 0 19261 0 0 11712 0 0 16408 0 0 17997 0 0 10812 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14919000 14919000 0 0 NaN 1821 1054 521 521 5426 5779 6169 6865 6169 6865 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16195 6169 6865 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16195 6169 6865 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16195 Q15059 263 Q15059 Q15059 Bromodomain-containing protein 3 BRD3 sp|Q15059|BRD3_HUMAN Bromodomain-containing protein 3 OS=Homo sapiens GN=BRD3 PE=1 SV=1 0.999927 41.3997 5.55997E-10 181.49 140.2 181.49 1 S TTTPTTSAITASRSESPPPLSDPKQAKVVAR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX SES(1)PPPLSDPK S(-41.4)ES(41.4)PPPLS(-65.84)DPK 3 2 0.032789 22982 0 0 15464 0 0 24138 0 0 14138 0 0 24550 0 0 23380 0 0 25523 0 0 23690 0 0 14598 0 0 13152 0 0 21751 0 0 14601 0 0 24246 0 0 14746 0 0 24893 0 0 23051 0 0 25635 0 0 24147 0 0 14867 0 0 12932 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 40764000 40764000 0 0 NaN 1822 1055 263 263 3713 3948 4208 4675 4208 4675 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12539 4208 4675 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12539 4208 4675 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12539 Q15061 77 Q15061 Q15061 WD repeat-containing protein 43 WDR43 sp|Q15061|WDR43_HUMAN WD repeat-containing protein 43 OS=Homo sapiens GN=WDR43 PE=1 SV=3 1 67.2345 0.0073132 77.894 59.799 67.234 1 S CTCLAWAPARLQAKESPQRKKRKSEAVGMSN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX LQAKES(1)PQRK LQAKES(67.23)PQRK 6 3 -0.77694 61117 0 0 55355 0 0 61100 0 0 56216 0 0 46827 0 0 56139 0 0 48442 0 0 51623 0 0 54728 0 0 8634.3 0 0 57832 0 0 52297 0 0 61354 0 0 57667 0 0 48392 0 0 56234 0 0 49405 0 0 52217 0 0 53733 0 0 9325 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 599600000 599600000 0 0 NaN 1823 1056 77 77 2517;2518 2659;2660 2855;2856 3184;3185 2856 3185 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8609 2855 3184 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8376 2855 3184 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8376 Q15061 431 Q15061 Q15061 WD repeat-containing protein 43 WDR43 sp|Q15061|WDR43_HUMAN WD repeat-containing protein 43 OS=Homo sapiens GN=WDR43 PE=1 SV=3 0.999602 34.0024 0.00746918 88.283 62.159 88.283 1 S KPAPPQTEQVESKRKSGGNEVSIEERLGAMD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX RKS(1)GGNEVSIEER RKS(34)GGNEVS(-34)IEER 3 3 -0.18661 16086 0 0 19112 0 0 18777 0 0 22473 0 0 15213 0 0 21246 0 0 13674 0 0 19659 0 0 25819 0 0 4581.2 0 0 15232 0 0 18074 0 0 18706 0 0 22850 0 0 15638 0 0 21340 0 0 14325 0 0 19919 0 0 24960 0 0 4768.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 32435000 32435000 0 0 NaN 1824 1056 431 431 3301 3502 3739 4153 3739 4153 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7770 3739 4153 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7770 3739 4153 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7770 Q15070 364 Q15070 Q15070 Mitochondrial inner membrane protein OXA1L OXA1L sp|Q15070|OXA1L_HUMAN Mitochondrial inner membrane protein OXA1L OS=Homo sapiens GN=OXA1L PE=1 SV=3 1 77.5932 0.00866705 77.593 60.653 77.593 1 S VHDLDKLPPREGFLESFKKGWKNAEMTRQLR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX EGFLES(1)FKK EGFLES(77.59)FKK 6 3 0.92521 10597 0 0 13227 0 0 13713 0 0 14956 0 0 7338.6 0 0 13158 0 0 6209 0 0 11733 0 0 16544 0 0 7950.1 0 0 10039 0 0 12505 0 0 13549 0 0 15222 0 0 7817.4 0 0 13266 0 0 6657.5 0 0 12064 0 0 15885 0 0 7757.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10463000 10463000 0 0 NaN 1825 1057 364 364 958 1012 1097 1212 1097 1212 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18989 1097 1212 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18989 1097 1212 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18989 Q15080 161 Q15080 Q15080 Neutrophil cytosol factor 4 NCF4 sp|Q15080|NCF4_HUMAN Neutrophil cytosol factor 4 OS=Homo sapiens GN=NCF4 PE=1 SV=2 0.996409 24.6485 2.17976E-07 170.26 123.67 170.26 1 S ALRRLRPRTRKVKSVSPQGNSVDRMAAPRAE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX S(0.003)VS(0.996)PQGNSVDR S(-24.65)VS(24.65)PQGNS(-37.57)VDR 3 2 0.064153 12050 0 0 5584.1 0 0 11688 0 0 6157.6 0 0 25710 0 0 12410 0 0 24912 0 0 15339 0 0 5307.7 0 0 2864.2 0 0 11401 0 0 5278.4 0 0 11961 0 0 6387.9 0 0 25233 0 0 12202 0 0 24859 0 0 15359 0 0 6068.6 0 0 3052 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12863000 12863000 0 0 NaN 1826 1058 161 161 4571 4876 5194 5769 5194 5769 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6880 5194 5769 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6880 5194 5769 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6880 Q15084 428 Q15084 Q15084 Protein disulfide-isomerase A6 PDIA6 sp|Q15084|PDIA6_HUMAN Protein disulfide-isomerase A6 OS=Homo sapiens GN=PDIA6 PE=1 SV=1 1 156.274 6.4478E-18 233.87 218.83 156.27 1 S DGRDGELPVEDDIDLSDVELDDLGKDEL___ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPPPPPXXX DGELPVEDDIDLS(1)DVELDDLGKDEL DGELPVEDDIDLS(156.27)DVELDDLGKDEL 13 3 1.9376 10946 0 0 11363 0 0 10667 0 0 13541 0 0 31553 0 0 10930 0 0 26468 0 0 29542 0 0 14446 0 0 729420 0 0 10357 0 0 10747 0 0 11003 0 0 13729 0 0 30704 0 0 12680 0 0 26858 0 0 50890 0 0 14764 0 0 687520 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 289740000 289740000 0 0 NaN 1827 1059 428 428 675 719 766;767 846;847;848 767 848 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24190 766 846 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23794 766 846 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23794 Q15121 116 Q15121 Q15121 Astrocytic phosphoprotein PEA-15 PEA15 sp|Q15121|PEA15_HUMAN Astrocytic phosphoprotein PEA-15 OS=Homo sapiens GN=PEA15 PE=1 SV=2 1 134.685 5.91938E-08 172.6 141.64 134.68 1 S RIPSAKKYKDIIRQPSEEEIIKLAPPPKKA_ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPXXXXXXXXX QPS(1)EEEIIK QPS(134.68)EEEIIK 3 2 0.18317 230220 0 0 113800 0 0 232540 0 0 122320 0 0 143000 0 0 226680 0 0 142260 0 0 173610 0 0 128720 0 0 45568 0 0 217850 0 0 107560 0 0 232920 0 0 126750 0 0 150380 0 0 221970 0 0 144470 0 0 177570 0 0 127580 0 0 46926 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 405000000 405000000 0 0 NaN 1828 1060 116 116 702;3103 746;3291 796;3521 878;879;880;3904 3521 3904 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14290 796 878 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16584 796 878 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16584 Q15149 1435 Q15149 Q15149 Plectin PLEC sp|Q15149|PLEC_HUMAN Plectin OS=Homo sapiens GN=PLEC PE=1 SV=3 1 77.5617 0.00766473 77.562 49.941 77.562 1 S ELQLVTYKAQLEPVASPAKKPKVQSGSESVI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX AQLEPVAS(1)PAK AQLEPVAS(77.56)PAK 8 3 0.91654 16029 0 0 21089 0 0 18904 0 0 20956 0 0 10369 0 0 19405 0 0 8128.9 0 0 16808 0 0 18786 0 0 3042.7 0 0 15178 0 0 19921 0 0 18762 0 0 21500 0 0 11005 0 0 19493 0 0 8674 0 0 17052 0 0 18084 0 0 3254 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28390000 28390000 0 0 NaN 1829 1061 1435 1435 395 422 457 506 457 506 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13313 457 506 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13313 457 506 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13313 Q15149 4622 Q15149 Q15149 Plectin PLEC sp|Q15149|PLEC_HUMAN Plectin OS=Homo sapiens GN=PLEC PE=1 SV=3 0.781338 9.66351 8.43458E-08 168.64 147.98 168.64 1 S STKGYYSPYSVSGSGSTAGSRTGSRTGSRAG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPXXXXXXXXXX GYYSPYSVSGS(0.05)GS(0.781)T(0.084)AGS(0.084)R GY(-136.07)Y(-121.58)S(-80.99)PY(-106.3)S(-53.08)VS(-38.63)GS(-11.97)GS(9.66)T(-9.66)AGS(-9.66)R 13 2 -0.29534 11855 0 0 7074.9 0 0 14675 0 0 6191.3 0 0 5855.1 0 0 17012 0 0 6448.2 0 0 10504 0 0 7665.2 0 0 11269 0 0 11229 0 0 6678.4 0 0 14508 0 0 6584.8 0 0 6472.1 0 0 16508 0 0 6568.5 0 0 11128 0 0 7511.7 0 0 10854 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14041000 14041000 0 0 NaN 1830 1061 4622 4622 1690 1782 1924 2142 1924 2142 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13448 1924 2142 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13448 1924 2142 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13448 Q15149 1732 Q15149 Q15149 Plectin PLEC sp|Q15149|PLEC_HUMAN Plectin OS=Homo sapiens GN=PLEC PE=1 SV=3 1 121.265 7.99675E-05 121.26 83.671 121.26 1 S SKRASFAEKTAQLERSLQEEHVAVAQLREEA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX S(1)LQEEHVAVAQLR S(121.26)LQEEHVAVAQLR 1 3 -1.3866 11681 0 0 8434.7 0 0 11613 0 0 8000.8 0 0 6938.7 0 0 13756 0 0 7054 0 0 10152 0 0 9769 0 0 2930.5 0 0 11053 0 0 7965.5 0 0 11641 0 0 8333.9 0 0 7321.6 0 0 13492 0 0 7249.2 0 0 10411 0 0 9523.9 0 0 2994.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13032000 13032000 0 0 NaN 1831 1061 1732 1732 3970 4230 4514 5017 4514 5017 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13829 4514 5017 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13829 4514 5017 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13829 Q15149 4386 Q15149 Q15149 Plectin PLEC sp|Q15149|PLEC_HUMAN Plectin OS=Homo sapiens GN=PLEC PE=1 SV=3 0.674117 6.16714 1.24368E-07 157.81 135.61 157.81 1 S DMLSGNAGGFRSRSSSVGSSSSYPISPAVSR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.163)S(0.163)S(0.674)VGSSSSYPISPAVSR S(-6.17)S(-6.17)S(6.17)VGS(-49.12)S(-71.53)S(-95.85)S(-100.33)Y(-120.38)PIS(-148.33)PAVS(-156.89)R 3 3 -0.4182 14886 0 0 8683.3 0 0 15404 0 0 7957.2 0 0 8815.5 0 0 14970 0 0 8533.8 0 0 11339 0 0 8471.1 0 0 5824.9 0 0 14088 0 0 8198.7 0 0 15400 0 0 8327.2 0 0 9331 0 0 14658 0 0 8698.5 0 0 11690 0 0 8361.1 0 0 5747.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 74111000 74111000 0 0 NaN 1832 1061 4386 4386 4474 4765 5072 5628 5072 5628 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13217 5072 5628 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13217 5072 5628 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13217 Q15154 159 Q15154 Q15154 Pericentriolar material 1 protein PCM1 sp|Q15154|PCM1_HUMAN Pericentriolar material 1 protein OS=Homo sapiens GN=PCM1 PE=1 SV=4 0.770166 8.36662 0.0469268 42.209 29.36 42.209 1 S LPMQINTNKSKDASTSPPNRETIGSAQCKEL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPXX DAS(0.112)T(0.112)S(0.77)PPNRET(0.004)IGS(0.002)AQCK DAS(-8.37)T(-8.37)S(8.37)PPNRET(-23.29)IGS(-26.17)AQCK 5 3 -0.4945 13828 0 0 16619 0 0 15928 0 0 17540 0 0 13744 0 0 14184 0 0 12548 0 0 15302 0 0 17429 0 0 4488.5 0 0 13093 0 0 15705 0 0 15889 0 0 17899 0 0 14064 0 0 14389 0 0 12964 0 0 15441 0 0 16990 0 0 4580.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14156000 14156000 0 0 NaN 1833 1062 159 159 646 688 733 813 733 813 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9354 733 813 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9354 733 813 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9354 Q15154 384 Q15154 Q15154 Pericentriolar material 1 protein PCM1 sp|Q15154|PCM1_HUMAN Pericentriolar material 1 protein OS=Homo sapiens GN=PCM1 PE=1 SV=4 0.997742 26.4536 0.0371907 59.542 24.001 59.542 1 S ESLSLTREVSQSRKPSASERLPDEKVELFSK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX KPS(0.998)AS(0.002)ER KPS(26.45)AS(-26.45)ER 3 2 -0.48972 17328 0 0 9369.2 0 0 16786 0 0 9046.9 0 0 10489 0 0 17683 0 0 12295 0 0 13930 0 0 9012.5 0 0 4319.8 0 0 16395 0 0 8848.9 0 0 16860 0 0 9447.5 0 0 11039 0 0 17300 0 0 12338 0 0 14248 0 0 9031.8 0 0 4390 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19571000 19571000 0 0 NaN 1834 1062 384 384 2161 2283 2457 2737 2457 2737 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6216 2457 2737 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6216 2457 2737 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6216 Q15154 960 Q15154 Q15154 Pericentriolar material 1 protein PCM1 sp|Q15154|PCM1_HUMAN Pericentriolar material 1 protein OS=Homo sapiens GN=PCM1 PE=1 SV=4 1 113.949 4.53456E-07 147.9 124.72 147.9 1 S NGKETKNRWKNNCPFSADENYRPLAKTRQQN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPXXXXX NNCPFS(1)ADENYRPLAK NNCPFS(113.95)ADENY(-113.95)RPLAK 6 3 -0.14619 12869 0 0 25471 0 0 14094 0 0 25614 0 0 14711 0 0 14576 0 0 13480 0 0 18906 0 0 25984 0 0 12386 0 0 12182 0 0 24062 0 0 14127 0 0 26113 0 0 14887 0 0 15180 0 0 14123 0 0 19169 0 0 25108 0 0 12100 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 31355000 31355000 0 0 NaN 1835 1062 960 960 2875 3048 3265 3621 3265 3621 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15554 3265 3621 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15554 3265 3621 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15554 Q15154 68 Q15154 Q15154 Pericentriolar material 1 protein PCM1 sp|Q15154|PCM1_HUMAN Pericentriolar material 1 protein OS=Homo sapiens GN=PCM1 PE=1 SV=4 0.743054 5.24178 7.7943E-07 154.43 114.16 154.43 1 S GVESDKRVTNDISPESSPGVGRRRTKTPHTF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPXXXXXXXXX VT(0.017)NDIS(0.222)PES(0.743)S(0.018)PGVGR VT(-16.37)NDIS(-5.24)PES(5.24)S(-16.27)PGVGR 9 2 0.30199 17902 0 0 17848 0 0 21865 0 0 16684 0 0 14048 0 0 19535 0 0 13975 0 0 18465 0 0 21389 0 0 6611.7 0 0 16955 0 0 16854 0 0 21693 0 0 17247 0 0 14723 0 0 19452 0 0 14431 0 0 18763 0 0 20790 0 0 6653.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 118360000 118360000 0 0 NaN 1836 1062 68 68 5294 5641 6013 6679 6013 6679 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11672 6013 6679 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11672 6013 6679 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11672 Q15154 93 Q15154 Q15154 Pericentriolar material 1 protein PCM1 sp|Q15154|PCM1_HUMAN Pericentriolar material 1 protein OS=Homo sapiens GN=PCM1 PE=1 SV=4 0.987319 18.9142 0.000553276 100.28 78.725 100.28 1 S KTPHTFPHSRYMSQMSVPEQAELEKLKQRIN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPXXXXXX YMS(0.013)QMS(0.987)VPEQAELEK Y(-54.83)MS(-18.91)QMS(18.91)VPEQAELEK 6 3 -0.86207 17442 0 0 14026 0 0 17220 0 0 12892 0 0 14491 0 0 18269 0 0 17074 0 0 17266 0 0 15049 0 0 25034 0 0 16504 0 0 13244 0 0 17324 0 0 13393 0 0 14901 0 0 18107 0 0 17201 0 0 18112 0 0 14935 0 0 23972 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 43891000 43891000 0 0 NaN 1837 1062 93 93 5402 5754 6141 6828 6141 6828 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18633 6141 6828 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18633 6141 6828 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18633 Q15185 113 Q15185 Q15185 Prostaglandin E synthase 3 PTGES3 sp|Q15185|TEBP_HUMAN Prostaglandin E synthase 3 OS=Homo sapiens GN=PTGES3 PE=1 SV=1 1 135.416 1.35811E-104 485.63 438.43 471.65 1 S WLSVDFNNWKDWEDDSDEDMSNFDRFSEMMN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPXXXXXX DWEDDS(1)DEDMSNFDR DWEDDS(135.42)DEDMS(-135.42)NFDR 6 2 -0.70368 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1838 1064 113 113 850 900;901 956;957;958;959;960;961;962;963;964;965;966;967;968;969;970;971;972;973;974;975;976;977 1054;1055;1056;1057;1058;1059;1060;1061;1062;1063;1064;1065;1066;1067;1068;1069;1070;1071;1072;1073;1074;1075 971 1069 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18184 967 1065 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16904 967 1065 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16904 Q15185 85 Q15185 Q15185 Prostaglandin E synthase 3 PTGES3 sp|Q15185|TEBP_HUMAN Prostaglandin E synthase 3 OS=Homo sapiens GN=PTGES3 PE=1 SV=1 0.950581 12.841 0.0313714 52.265 36.041 52.265 1 S DRSILCCLRKGESGQSWPRLTKERAKLNWLS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX KGES(0.049)GQS(0.951)WPR KGES(-12.84)GQS(12.84)WPR 7 3 -0.61729 13077 0 0 12447 0 0 12373 0 0 12650 0 0 13489 0 0 12737 0 0 13441 0 0 14165 0 0 12302 0 0 1615.6 0 0 12372 0 0 11759 0 0 12513 0 0 12978 0 0 13621 0 0 12784 0 0 13653 0 0 14202 0 0 12186 0 0 1849.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17654000 17654000 0 0 NaN 1839 1064 85 85 2064 2184 2352 2622 2352 2622 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9920 2352 2622 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9920 2352 2622 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9920 Q15276 407 Q15276 Q15276 Rab GTPase-binding effector protein 1 RABEP1 sp|Q15276|RABE1_HUMAN Rab GTPase-binding effector protein 1 OS=Homo sapiens GN=RABEP1 PE=1 SV=2 0.899761 9.68172 1.1307E-23 285.31 234.37 285.31 1 S KSDNDMFKDGLRRAQSTDSLGTSGSLQSKAL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPXX RAQS(0.9)T(0.097)DS(0.003)LGTSGSLQSK RAQS(9.68)T(-9.68)DS(-24.2)LGT(-83.7)S(-121.27)GS(-167.16)LQS(-245.58)K 4 3 0.25196 32909 0 0 30754 0 0 34656 0 0 31433 0 0 31790 0 0 37827 0 0 32571 0 0 32090 0 0 33254 0 0 13841 0 0 31147 0 0 29057 0 0 34763 0 0 32335 0 0 32442 0 0 37584 0 0 33135 0 0 32828 0 0 32783 0 0 13776 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 71081000 71081000 0 0 NaN 1840 1066 407 407 405;3188 433;3381 468;3613 522;4004 3613 4004 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10379 3613 4004 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10379 3613 4004 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10379 Q15287 27 Q15287 Q15287 RNA-binding protein with serine-rich domain 1 RNPS1 sp|Q15287|RNPS1_HUMAN RNA-binding protein with serine-rich domain 1 OS=Homo sapiens GN=RNPS1 PE=1 SV=1 0.982371 17.4605 0.020283 74.376 35.158 74.376 1 S LGVKENNKKSSTRAPSPTKRKDRSDEKSKDR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX APS(0.982)PT(0.018)KR APS(17.46)PT(-17.46)KR 3 2 0.060315 23717 0 0 24674 0 0 23055 0 0 24003 0 0 23970 0 0 24782 0 0 26800 0 0 26297 0 0 26666 0 0 2975 0 0 22440 0 0 23305 0 0 23270 0 0 24699 0 0 24311 0 0 24830 0 0 27140 0 0 26409 0 0 26317 0 0 3409.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 43525000 43525000 0 0 NaN 1841 1067 27 27 376 402 437 485 437 485 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6360 437 485 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6360 437 485 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6360 Q15287 251 Q15287 Q15287 RNA-binding protein with serine-rich domain 1 RNPS1 sp|Q15287|RNPS1_HUMAN RNA-binding protein with serine-rich domain 1 OS=Homo sapiens GN=RNPS1 PE=1 SV=1 1 81.2635 0.0135439 81.263 55.527 81.263 1 S TAVLAPWPRPPPRRFSPPRRMLPPPPMWRRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX RFS(1)PPRR RFS(81.26)PPRR 3 3 0.081759 161970 0 0 171650 0 0 164670 0 0 181470 0 0 149820 0 0 170500 0 0 153230 0 0 172910 0 0 194710 0 0 15204 0 0 153270 0 0 162210 0 0 165480 0 0 185550 0 0 153010 0 0 171450 0 0 156940 0 0 173810 0 0 190360 0 0 18319 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 563150000 563150000 0 0 NaN 1842 1067 251 251 3233 3429 3664 4064;4065 3664 4065 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7259 3664 4065 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7259 3664 4065 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7259 Q15287 155 Q15287 Q15287 RNA-binding protein with serine-rich domain 1 RNPS1 sp|Q15287|RNPS1_HUMAN RNA-binding protein with serine-rich domain 1 OS=Homo sapiens GN=RNPS1 PE=1 SV=1 0.999002 29.9473 0.00387305 94.767 78.135 94.767 2 S KSKPPKRDEKERKRRSPSPKPTKVHIGRLTR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPXXXXXXXX S(0.999)PS(0.014)PKPT(0.987)K S(29.95)PS(-18.95)PKPT(18.95)K 1 2 0.24045 0 240610 0 0 278790 0 0 231610 0 0 272790 0 0 254020 0 0 248170 0 0 262350 0 0 273770 0 0 311280 0 0 16212 0 0 227640 0 0 263330 0 0 234020 0 0 280070 0 0 256630 0 0 250200 0 0 267990 0 0 274100 0 0 305060 0 0 21363 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 5 0 447340000 0 447340000 0 NaN 1843 1067 155 155 3484;4187 3701;4462 3947;4755;4756 4384;4385;5274;5275;5276;5277 4756 5277 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8541 4756 5277 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8541 4755 5275 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8336 Q15287 157 Q15287 Q15287 RNA-binding protein with serine-rich domain 1 RNPS1 sp|Q15287|RNPS1_HUMAN RNA-binding protein with serine-rich domain 1 OS=Homo sapiens GN=RNPS1 PE=1 SV=1 0.994333 22.4358 0.00387305 93.839 76.813 70.963 2 S KPPKRDEKERKRRSPSPKPTKVHIGRLTRNV X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX RS(0.999)PS(0.994)PKPT(0.007)K RS(28.65)PS(22.44)PKPT(-22.44)K 4 3 0.15651 0 224830 0 0 261000 0 0 215740 0 0 254980 0 0 237150 0 0 231350 0 0 244280 0 0 256560 0 0 291900 0 0 11684 0 0 212710 0 0 246520 0 0 218040 0 0 261790 0 0 239540 0 0 233290 0 0 249620 0 0 256720 0 0 285990 0 0 16701 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 4 0 410210000 0 410210000 0 NaN 1844 1067 157 157 3484;4187 3701;4462 3947;4755 4384;4385;5274;5275;5276 3947 4384 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7041 4755 5275 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8336 4755 5275 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8336 Q15291 497 Q15291 Q15291 Retinoblastoma-binding protein 5 RBBP5 sp|Q15291|RBBP5_HUMAN Retinoblastoma-binding protein 5 OS=Homo sapiens GN=RBBP5 PE=1 SV=2 1 52.5549 0.0262364 52.555 13.336 52.555 1 S KQAGRPKGSKGKEKDSPFKPKLYKGDRGLPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX EKDS(1)PFKPK EKDS(52.55)PFKPK 4 4 0.57966 19209 0 0 17035 0 0 17363 0 0 16955 0 0 10666 0 0 18641 0 0 13061 0 0 15414 0 0 17886 0 0 2221.1 0 0 18170 0 0 16092 0 0 17512 0 0 17441 0 0 11257 0 0 18573 0 0 13312 0 0 15653 0 0 17444 0 0 2448.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10405000 10405000 0 0 NaN 1845 1068 497 497 1006 1062 1149 1267 1149 1267 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11534 1149 1267 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11534 1149 1267 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11534 Q15311 30 Q15311 Q15311 RalA-binding protein 1 RALBP1 sp|Q15311|RBP1_HUMAN RalA-binding protein 1 OS=Homo sapiens GN=RALBP1 PE=1 SV=3 0.427741 1.74619 6.94185E-07 145.29 125.45 145.29 S HRRVEHGSGLTRTPSSEEISPTKFPGLYRTG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX T(0.286)PS(0.286)S(0.428)EEISPTK T(-1.75)PS(-1.75)S(1.75)EEIS(-82.4)PT(-111.41)K 4 3 -0.2964 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1846 1069 30 30 4856;4857 5181;5182 5520 6138 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11515 5520 6138 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11515 5520 6138 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11515 Q15365 173 Q15365 Q15365 Poly(rC)-binding protein 1 PCBP1 sp|Q15365|PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Homo sapiens GN=PCBP1 PE=1 SV=2 0.999996 54.1022 8.4402E-97 479.89 443.3 479.89 1 S CVKQICLVMLETLSQSPQGRVMTIPYQPMPA X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;Oxidation (M);X;X XXXPPPPPPPPPPPPPPPPPXXXXXXXXXXX QICLVMLETLSQS(1)PQGR QICLVMLET(-88.25)LS(-54.1)QS(54.1)PQGR 13 2 1.1178 3340.3 0 0 45451 0 0 23824 0 0 43934 0 0 25701 0 0 22065 0 0 29317 0 0 35386 0 0 47295 0 0 88206 0 0 3163.2 0 0 42927 0 0 22842 0 0 44852 0 0 26038 0 0 23426 0 0 30161 0 0 37636 0 0 45904 0 0 83876 0 0 1 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 145710000 145710000 0 0 NaN 1847 1070 173 173 3045 3229;3230 3454;3455 3828;3829 3455 3829 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23606 3455 3829 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23606 3455 3829 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23606 Q15365 189 Q15365 Q15365 Poly(rC)-binding protein 1 PCBP1 sp|Q15365|PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Homo sapiens GN=PCBP1 PE=1 SV=2 0.619508 2.11701 4.662E-08 153.27 125.95 153.27 1 S PQGRVMTIPYQPMPASSPVICAGGQDRCSDA X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;Oxidation (M);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPPPPPXXXX VMTIPYQPMPAS(0.62)S(0.38)PVICAGGQDR VMT(-99.17)IPY(-71)QPMPAS(2.12)S(-2.12)PVICAGGQDR 12 3 -0.65153 23942 0 0 31701 0 0 25503 0 0 33984 0 0 24745 0 0 25989 0 0 27080 0 0 33213 0 0 35965 0 0 109370 0 0 22661 0 0 29959 0 0 25586 0 0 34626 0 0 25198 0 0 26703 0 0 27696 0 0 36331 0 0 35110 0 0 103750 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 520220000 520220000 0 0 NaN 1848 1070 189 189 5186 5526;5527;5528 5888;5890;5891 6544;6546;6547 5891 6547 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20899 5891 6547 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20899 5891 6547 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20899 Q15365 190 Q15365 Q15365 Poly(rC)-binding protein 1 PCBP1 sp|Q15365|PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Homo sapiens GN=PCBP1 PE=1 SV=2 0.923432 10.8154 7.05962E-05 104.83 80.375 104.83 1 S QGRVMTIPYQPMPASSPVICAGGQDRCSDAA X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPPPXXXXX VMTIPYQPMPAS(0.077)S(0.923)PVICAGGQDR VMT(-67.9)IPY(-44.7)QPMPAS(-10.82)S(10.82)PVICAGGQDR 13 3 -0.084376 3430.1 0 0 6881.1 0 0 5432.5 0 0 6515.2 0 0 6126.1 0 0 4220 0 0 7717.1 0 0 6873.7 0 0 6966.3 0 0 39650 0 0 3253.3 0 0 6498.2 0 0 5366.6 0 0 6675 0 0 6197.6 0 0 4440.3 0 0 7758.4 0 0 7986.7 0 0 6905.5 0 0 37494 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 105130000 105130000 0 0 NaN 1849 1070 190 190 5186 5526;5527;5528 5889 6545 5889 6545 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18210 5889 6545 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18210 5889 6545 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18210 Q15366 189 Q15366 Q15366 Poly(rC)-binding protein 2 PCBP2 sp|Q15366|PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Homo sapiens GN=PCBP2 PE=1 SV=1 0.963709 14.2612 4.1652E-11 208.81 166 208.81 1 S PPKGVTIPYRPKPSSSPVIFAGGQDRYSTGS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPPPXXXXX PSS(0.036)S(0.964)PVIFAGGQDR PS(-37.67)S(-14.26)S(14.26)PVIFAGGQDR 4 2 -0.44649 53174 0 0 82187 0 0 54764 0 0 87796 0 0 47823 0 0 56744 0 0 58190 0 0 63091 0 0 92743 0 0 46109 0 0 50322 0 0 77671 0 0 54988 0 0 89305 0 0 49120 0 0 58430 0 0 59681 0 0 64428 0 0 90044 0 0 44877 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 524480000 524480000 0 0 NaN 1850 1071 189 189 1679;2979;2989 1771;3158;3168 1913;3381;3391 2131;3749;3761 3391 3761 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14745 3391 3761 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14745 3391 3761 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14745 Q15366 364 Q15366 Q15366 Poly(rC)-binding protein 2 PCBP2 sp|Q15366|PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Homo sapiens GN=PCBP2 PE=1 SV=1 0.992475 21.202 5.68335E-07 160.98 156.62 160.98 1 S YLINVRLSSETGGMGSS______________ X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPXXXXXXXXXXXXXX LSSETGGMGS(0.992)S(0.008) LS(-143.81)S(-138.65)ET(-121.8)GGMGS(21.2)S(-21.2) 10 2 0.084336 52500 0 0 39873 0 0 52523 0 0 45782 0 0 33065 0 0 58413 0 0 33456 0 0 42755 0 0 37561 0 0 16418 0 0 49678 0 0 37701 0 0 52649 0 0 46850 0 0 34712 0 0 57821 0 0 34149 0 0 43988 0 0 36887 0 0 16449 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 43665000 43665000 0 0 NaN 1851 1071 364 364 2588 2733;2734 2931;2932 3265;3266 2932 3266 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11670 2932 3266 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11670 2932 3266 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11670 Q15366 365 Q15366 Q15366 Poly(rC)-binding protein 2 PCBP2 sp|Q15366|PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Homo sapiens GN=PCBP2 PE=1 SV=1 0.5 0 0.000254485 101.48 97.327 101.48 1 S LINVRLSSETGGMGSS_______________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LSSETGGMGS(0.5)S(0.5) LS(-93.11)S(-90)ET(-78.53)GGMGS(0)S(0) 11 2 -1.0609 34655 0 0 15137 0 0 33454 0 0 13925 0 0 11405 0 0 38493 0 0 12840 0 0 21245 0 0 17227 0 0 5044.3 0 0 32788 0 0 14293 0 0 33488 0 0 14767 0 0 12900 0 0 37280 0 0 13121 0 0 22131 0 0 16812 0 0 5241.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8926100 8926100 0 0 NaN 1852 1071 365 365 2588 2733;2734 2931 3265 2931 3265 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8829 2931 3265 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8829 2931 3265 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8829 Q15366 173 Q15366 Q15366 Poly(rC)-binding protein 2 PCBP2 sp|Q15366|PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Homo sapiens GN=PCBP2 PE=1 SV=1 0.999999 58.5 1.01204E-22 258.67 237.72 258.67 1 S CVKQICVVMLETLSQSPPKGVTIPYRPKPSS X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPXXXXXXXXXXXX QICVVMLETLSQS(1)PPK QICVVMLET(-111.18)LS(-58.5)QS(58.5)PPK 13 3 0.14464 27468 0 0 36028 0 0 30024 0 0 39876 0 0 27320 0 0 30090 0 0 26856 0 0 36529 0 0 40568 0 0 272820 0 0 26001 0 0 34056 0 0 30052 0 0 40552 0 0 27891 0 0 31192 0 0 27735 0 0 44612 0 0 39447 0 0 257740 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 879110000 879110000 0 0 NaN 1853 1071 173 173 3046 3231;3232 3456;3457;3458 3830;3831;3832 3458 3832 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23510 3458 3832 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23510 3458 3832 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23510 Q15388 138 Q15388 Q15388 Mitochondrial import receptor subunit TOM20 homolog TOMM20 sp|Q15388|TOM20_HUMAN Mitochondrial import receptor subunit TOM20 homolog OS=Homo sapiens GN=TOMM20 PE=1 SV=1 0.995619 23.5652 0.000136896 120.84 105.96 120.84 1 S LTKLPTISQRIVSAQSLAEDDVE________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPXXXXXXXX IVS(0.004)AQS(0.996)LAEDDVE IVS(-23.57)AQS(23.57)LAEDDVE 6 2 0.2098 7216 0 0 7176.4 0 0 6006.8 0 0 7538.2 0 0 7360.8 0 0 7908.5 0 0 6637.1 0 0 7939.9 0 0 7603.9 0 0 24336 0 0 6823.6 0 0 6781.4 0 0 6133.2 0 0 7723.8 0 0 7380.5 0 0 7956.8 0 0 6817.2 0 0 8696.4 0 0 7461.8 0 0 23099 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 66630000 66630000 0 0 0.60526 1854 1072 138 138 1979 2093 2257 2520 2257 2520 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19163 2257 2520 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19163 2257 2520 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19163 Q15390 119 Q15390 Q15390 Mitochondrial fission regulator 1 MTFR1 sp|Q15390|MTFR1_HUMAN Mitochondrial fission regulator 1 OS=Homo sapiens GN=MTFR1 PE=1 SV=2 0.999992 50.7323 1.14285E-11 211.16 180.21 211.16 1 S QDDLLFFEKAPSRQISLPDLSQEEPQLKTPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX QIS(1)LPDLSQEEPQLK QIS(50.73)LPDLS(-50.73)QEEPQLK 3 3 0.17987 5365.4 0 0 6815.6 0 0 5519.1 0 0 6754 0 0 5266.6 0 0 5097.8 0 0 4625.6 0 0 4916.9 0 0 7378.7 0 0 13976 0 0 5077.6 0 0 6438.1 0 0 5544.3 0 0 6912 0 0 5353 0 0 5207.7 0 0 4814.6 0 0 5360.1 0 0 7163.8 0 0 13274 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9294900 9294900 0 0 NaN 1855 1073 119 119 3050 3236 3462 3836 3462 3836 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21637 3462 3836 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21637 3462 3836 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21637 Q15398 830 Q15398 Q15398 Disks large-associated protein 5 DLGAP5 sp|Q15398|DLGP5_HUMAN Disks large-associated protein 5 OS=Homo sapiens GN=DLGAP5 PE=1 SV=2 0.999523 33.9998 0.0446664 44.258 27.764 44.258 1 S FTQLERRHQEHARHISFGGNLITFSPLQPGE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP HIS(1)FGGNLITFSPLQPGEF HIS(34)FGGNLIT(-34)FS(-41.02)PLQPGEF 3 3 -1.6603 2984.5 0 0 3317.6 0 0 3506.3 0 0 3260.6 0 0 3441.5 0 0 3745 0 0 3215 0 0 3531.6 0 0 3226.4 0 0 30202 0 0 2826 0 0 3133.7 0 0 3499.4 0 0 3359.1 0 0 3493.1 0 0 3786.4 0 0 3283.7 0 0 4460.8 0 0 3183 0 0 28520 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9917700 9917700 0 0 NaN 1856 1074 830 830 1721 1815 1960 2185 1960 2185 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24124 1960 2185 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24124 1960 2185 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24124 Q15398 662 Q15398 Q15398 Disks large-associated protein 5 DLGAP5 sp|Q15398|DLGP5_HUMAN Disks large-associated protein 5 OS=Homo sapiens GN=DLGAP5 PE=1 SV=2 0.995965 24.0641 4.60399E-08 161.68 142.85 161.68 1 S VSQSRNEMGIPQQTTSPENAGPQNTKSEHVK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPPXXXXX NEMGIPQQTT(0.004)S(0.996)PENAGPQNTK NEMGIPQQT(-38.89)T(-24.06)S(24.06)PENAGPQNT(-105)K 11 3 0.26003 10021 0 0 15918 0 0 10055 0 0 13676 0 0 8978.2 0 0 10373 0 0 10548 0 0 12345 0 0 17340 0 0 16652 0 0 9482.3 0 0 15024 0 0 10112 0 0 14126 0 0 9203.2 0 0 10600 0 0 10848 0 0 12808 0 0 16822 0 0 15965 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19418000 19418000 0 0 NaN 1857 1074 662 662 2803 2972 3184 3536 3184 3536 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13344 3184 3536 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13344 3184 3536 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13344 Q15418;P51812;Q9UK32 221;227;232 Q15418 Q15418 Ribosomal protein S6 kinase alpha-1;Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase alpha-6 RPS6KA1;RPS6KA3;RPS6KA6 sp|Q15418|KS6A1_HUMAN Ribosomal protein S6 kinase alpha-1 OS=Homo sapiens GN=RPS6KA1 PE=1 SV=2;sp|P51812|KS6A3_HUMAN Ribosomal protein S6 kinase alpha-3 OS=Homo sapiens GN=RPS6KA3 PE=1 SV=1;sp|Q9UK32|KS6A6_HUMAN Ribosomal protein S6 kinase alpha-6 OS=Homo 0.999969 45.1181 6.60802E-16 215.6 177.92 213.01 1 S FGLSKEAIDHEKKAYSFCGTVEYMAPEVVNR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP AYS(1)FCGTVEYMAPEVVNR AY(-83.96)S(45.12)FCGT(-45.12)VEY(-132.4)MAPEVVNR 3 3 0.44838 24710 0 0 22137 0 0 26878 0 0 23022 0 0 26235 0 0 31211 0 0 25852 0 0 30207 0 0 27691 0 0 165530 0 0 23390 0 0 20917 0 0 26931 0 0 23716 0 0 26658 0 0 31218 0 0 26384 0 0 35327 0 0 27245 0 0 156570 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 155510000 155510000 0 0 NaN 1858 1075 221 221 590;2022 628;629;2140 669;670;2306 744;745;2573 670 745 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22066 2306 2573 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20312 2306 2573 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20312 Q15424 21 Q15424 Q15424 Scaffold attachment factor B1 SAFB sp|Q15424|SAFB1_HUMAN Scaffold attachment factor B1 OS=Homo sapiens GN=SAFB PE=1 SV=4 0.619157 5.80128 1.93197E-26 200.59 184.35 200.59 1 S SGLGDSGAAGAAALSSASSETGTRRLSDLRV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPXXXXXX AETLSGLGDSGAAGAAALS(0.041)S(0.619)AS(0.163)S(0.163)ET(0.011)GT(0.003)RR AET(-180.32)LS(-159.64)GLGDS(-128.38)GAAGAAALS(-11.79)S(5.8)AS(-5.8)S(-5.8)ET(-17.42)GT(-23.18)RR 20 3 0.27612 4384.3 0 0 3981.6 0 0 3323.2 0 0 4435.8 0 0 3512.7 0 0 4568.7 0 0 3464.9 0 0 3270.6 0 0 3433.7 0 0 21272 0 0 4144.7 0 0 3763.9 0 0 3409.5 0 0 4529 0 0 3552.9 0 0 4597.3 0 0 3528.4 0 0 3971.9 0 0 3389.4 0 0 20106 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 31671000 31671000 0 0 NaN 1859 1076 21 21 165;166 173;174 187 211 187 211 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17930 187 211 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17930 187 211 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17930 Q15424 24 Q15424 Q15424 Scaffold attachment factor B1 SAFB sp|Q15424|SAFB1_HUMAN Scaffold attachment factor B1 OS=Homo sapiens GN=SAFB PE=1 SV=4 0.657529 3.89574 3.28799E-12 141.36 127.63 141.36 1 S GDSGAAGAAALSSASSETGTRRLSDLRVIDL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX AETLSGLGDSGAAGAAALSSAS(0.268)S(0.658)ET(0.052)GT(0.021)R AET(-125.16)LS(-125.16)GLGDS(-124.96)GAAGAAALS(-42.73)S(-32.37)AS(-3.9)S(3.9)ET(-10.98)GT(-14.86)R 23 3 0.23685 5091.3 0 0 5465.7 0 0 4948.1 0 0 5641.3 0 0 5511.4 0 0 4966.6 0 0 5894 0 0 6014.2 0 0 5000.8 0 0 12102 0 0 4817.2 0 0 5164.3 0 0 4998.3 0 0 5770.8 0 0 5564.3 0 0 5044.3 0 0 5956.8 0 0 6356.7 0 0 4972.2 0 0 11534 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15660000 15660000 0 0 NaN 1860 1076 24 24 165;166 173;174 186 210 186 210 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19399 186 210 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19399 186 210 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19399 Q15424 589 Q15424 Q15424 Scaffold attachment factor B1 SAFB sp|Q15424|SAFB1_HUMAN Scaffold attachment factor B1 OS=Homo sapiens GN=SAFB PE=1 SV=4 0.982369 17.46 0.00915605 86.911 53.02 86.911 1 S VISVKTSGSKERASKSQDRKSASREKRSVVS X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY) XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX AS(0.018)KS(0.982)QDRK AS(-17.46)KS(17.46)QDRK 4 3 0.18657 19903 0 0 23670 0 0 20601 0 0 23320 0 0 16153 0 0 19408 0 0 18301 0 0 20277 0 0 23585 0 0 6203.6 0 0 18836 0 0 22359 0 0 20654 0 0 23903 0 0 16690 0 0 19651 0 0 18671 0 0 20493 0 0 23048 0 0 6310.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 104990000 104990000 0 0 NaN 1861 1076 589 589 468 498 535 599 535 599 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5784 535 599 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5784 535 599 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5784 Q15424 196 Q15424 Q15424 Scaffold attachment factor B1 SAFB sp|Q15424|SAFB1_HUMAN Scaffold attachment factor B1 OS=Homo sapiens GN=SAFB PE=1 SV=4 0.903478 12.5306 8.18331E-18 219.16 198.07 219.16 1 S HAIEDKETINNLDTSSSDFTILQEIEEPSLE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPPPPPP ETINNLDT(0.004)S(0.05)S(0.903)S(0.042)DFTILQEIEEPSLEPENEK ET(-71.36)INNLDT(-23.19)S(-12.53)S(12.53)S(-13.35)DFT(-64.88)ILQEIEEPS(-149.72)LEPENEK 10 4 -0.67167 3133.2 0 0 4712.4 0 0 3886.3 0 0 3806.2 0 0 3276.8 0 0 3883.7 0 0 6013.3 0 0 6221.7 0 0 3201.8 0 0 107390 0 0 2967.6 0 0 4446.5 0 0 3867.6 0 0 3964.7 0 0 3397.4 0 0 4120.9 0 0 5912.6 0 0 9386 0 0 3278.4 0 0 101260 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 65473000 65473000 0 0 NaN 1862 1076 196 196 1188 1249 1347 1491 1347 1491 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23705 1347 1491 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23705 1347 1491 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23705 Q15424 601 Q15424 Q15424 Scaffold attachment factor B1 SAFB sp|Q15424|SAFB1_HUMAN Scaffold attachment factor B1 OS=Homo sapiens GN=SAFB PE=1 SV=4 0.99086 20.3508 0.0109598 86.624 46.579 86.624 1 S ASKSQDRKSASREKRSVVSFDKVKEPRKSRD X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX S(0.991)VVS(0.009)FDK S(20.35)VVS(-20.35)FDK 1 2 0.40051 34615 0 0 20567 0 0 38446 0 0 19494 0 0 28124 0 0 36787 0 0 30607 0 0 29324 0 0 19900 0 0 8710 0 0 32769 0 0 19423 0 0 38371 0 0 20359 0 0 29174 0 0 36024 0 0 30743 0 0 29966 0 0 20090 0 0 8880.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 32009000 32009000 0 0 NaN 1863 1076 601 601 4582;4583;4584 4887;4888;4889 5206 5781 5206 5781 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15645 5206 5781 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15645 5206 5781 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15645 Q15424 604 Q15424 Q15424 Scaffold attachment factor B1 SAFB sp|Q15424|SAFB1_HUMAN Scaffold attachment factor B1 OS=Homo sapiens GN=SAFB PE=1 SV=4 0.999903 40.1262 0.000116585 128.31 95.789 128.31 1 S SQDRKSASREKRSVVSFDKVKEPRKSRDSES Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX SVVS(1)FDKVK S(-40.13)VVS(40.13)FDKVK 4 3 0.71734 139190 0 0 128850 0 0 140650 0 0 119100 0 0 124020 0 0 134780 0 0 133600 0 0 139670 0 0 138380 0 0 12400 0 0 131710 0 0 121660 0 0 141360 0 0 123140 0 0 126980 0 0 134480 0 0 135660 0 0 140280 0 0 136330 0 0 14908 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 477520000 477520000 0 0 NaN 1864 1076 604 604 4582;4583;4584 4887;4888;4889 5207;5208;5209 5782;5783;5784 5208 5783 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16742 5208 5783 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16742 5208 5783 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16742 Q15424 582 Q15424 Q15424 Scaffold attachment factor B1 SAFB sp|Q15424|SAFB1_HUMAN Scaffold attachment factor B1 OS=Homo sapiens GN=SAFB PE=1 SV=4 0.998213 27.7888 0.021622 64.374 14.266 64.374 1 S DKSKGVPVISVKTSGSKERASKSQDRKSASR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX TS(0.002)GS(0.998)KER T(-38.99)S(-27.79)GS(27.79)KER 4 2 -0.32189 5838.3 0 0 7913.7 0 0 6847.9 0 0 7787.4 0 0 6047.1 0 0 6404.7 0 0 5267.4 0 0 7144.8 0 0 9228.2 0 0 1087.9 0 0 5528.3 0 0 7475.1 0 0 6826.1 0 0 7981.3 0 0 6176.6 0 0 6492.8 0 0 5507.6 0 0 7170.8 0 0 8937.5 0 0 1189.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20790000 20790000 0 0 NaN 1865 1076 582 582 4916 5241 5584 6206 5584 6206 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5125 5584 6206 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5125 5584 6206 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5125 Q15435 12 Q15435 Q15435 Protein phosphatase 1 regulatory subunit 7 PPP1R7 sp|Q15435|PP1R7_HUMAN Protein phosphatase 1 regulatory subunit 7 OS=Homo sapiens GN=PPP1R7 PE=1 SV=1 1 127.489 1.38837E-15 221.31 202.48 127.49 1 S ____MAAERGAGQQQSQEMMEVDRRVESEES X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY) XXXXXXXXXPPPPPPPPPPPPPPPPXXXXXX GAGQQQS(1)QEMMEVDRR GAGQQQS(127.49)QEMMEVDRR 7 3 0.27935 22510 0 0 16789 0 0 23302 0 0 17085 0 0 54870 0 0 23377 0 0 58510 0 0 31909 0 0 18385 0 0 12538 0 0 21303 0 0 15861 0 0 23812 0 0 17626 0 0 53832 0 0 23281 0 0 58285 0 0 32054 0 0 19843 0 0 12544 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 61168000 61168000 0 0 NaN 1866 1077 12 12 1361;1362 1435;1436 1543;1544 1706;1707 1544 1707 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9112 1543 1706 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10597 1543 1706 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10597 Q15435 24 Q15435 Q15435 Protein phosphatase 1 regulatory subunit 7 PPP1R7 sp|Q15435|PP1R7_HUMAN Protein phosphatase 1 regulatory subunit 7 OS=Homo sapiens GN=PPP1R7 PE=1 SV=1 1 64.7047 0.0343876 64.705 48.199 64.705 2 S QQQSQEMMEVDRRVESEESGDEEGKKHSSGI X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX RVES(1)EES(1)GDEEGKK RVES(64.7)EES(64.7)GDEEGKK 4 3 0.93435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1867 1077 24 24 3542 3760 4006 4446 4006 4446 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8158 4006 4446 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8158 4006 4446 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8158 Q15435 27 Q15435 Q15435 Protein phosphatase 1 regulatory subunit 7 PPP1R7 sp|Q15435|PP1R7_HUMAN Protein phosphatase 1 regulatory subunit 7 OS=Homo sapiens GN=PPP1R7 PE=1 SV=1 1 64.7047 0.0343876 64.705 48.199 64.705 2 S SQEMMEVDRRVESEESGDEEGKKHSSGIVAD Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPXXXXXXXX RVES(1)EES(1)GDEEGKK RVES(64.7)EES(64.7)GDEEGKK 7 3 0.93435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1868 1077 27 27 3542 3760 4006 4446 4006 4446 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8158 4006 4446 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8158 4006 4446 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8158 Q15477 256 Q15477 Q15477 Helicase SKI2W SKIV2L sp|Q15477|SKIV2_HUMAN Helicase SKI2W OS=Homo sapiens GN=SKIV2L PE=1 SV=3 0.996454 24.4877 1.47429E-20 252.21 193.96 252.21 1 S TVSASPCSAPLARASSLEDLVLKEASTAVST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX AS(0.004)S(0.996)LEDLVLK AS(-24.49)S(24.49)LEDLVLK 3 2 0.34422 61499 0 0 12739 0 0 61769 0 0 13852 0 0 45279 0 0 63223 0 0 44344 0 0 41906 0 0 14298 0 0 34011 0 0 58195 0 0 12041 0 0 61979 0 0 14948 0 0 46881 0 0 60965 0 0 44360 0 0 43886 0 0 15382 0 0 32995 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 66469000 66469000 0 0 NaN 1869 1078 256 256 499 530 570 635;636 570 635 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22333 570 635 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22333 570 635 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22333 Q15554 365 Q15554 Q15554 Telomeric repeat-binding factor 2 TERF2 sp|Q15554|TERF2_HUMAN Telomeric repeat-binding factor 2 OS=Homo sapiens GN=TERF2 PE=1 SV=3 0.999352 31.8831 0.00801745 79.635 56.306 79.635 1 S LDQKDLVLPTQALPASPALKNKRPRKDENES X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPXXXXXXXXXXX DLVLPT(0.001)QALPAS(0.999)PALK DLVLPT(-31.88)QALPAS(31.88)PALK 12 3 0.092144 7082 0 0 8475.9 0 0 8520 0 0 7728.3 0 0 7835.2 0 0 9427.1 0 0 7430.7 0 0 7637.8 0 0 8020 0 0 7688.6 0 0 6706.8 0 0 8002.6 0 0 8487.4 0 0 8008.1 0 0 7986.5 0 0 9365.5 0 0 7599.4 0 0 7962.3 0 0 7888.3 0 0 7416.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 95526000 95526000 0 0 NaN 1870 1079 365 365 750 794 845 932 845 932 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22694 845 932 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22694 845 932 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22694 Q15596 771 Q15596 Q15596 Nuclear receptor coactivator 2 NCOA2 sp|Q15596|NCOA2_HUMAN Nuclear receptor coactivator 2 OS=Homo sapiens GN=NCOA2 PE=1 SV=2 0.997675 26.3258 0.000146708 102.29 83.84 102.29 1 S DIGLPEITPKLERLDSKTDPASNTKLIAMKT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX LDS(0.998)KT(0.002)DPASNTK LDS(26.33)KT(-26.33)DPAS(-71.72)NT(-80.45)K 3 3 -0.51902 20268 0 0 14485 0 0 21515 0 0 14398 0 0 23290 0 0 21734 0 0 25078 0 0 20128 0 0 14827 0 0 6367.6 0 0 19183 0 0 13683 0 0 21618 0 0 14906 0 0 23545 0 0 21450 0 0 25160 0 0 20444 0 0 15065 0 0 6461.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13524000 13524000 0 0 NaN 1871 1080 771 771 2317 2450 2639 2950 2639 2950 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11451 2639 2950 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11451 2639 2950 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11451 Q15596 565 Q15596 Q15596 Nuclear receptor coactivator 2 NCOA2 sp|Q15596|NCOA2_HUMAN Nuclear receptor coactivator 2 OS=Homo sapiens GN=NCOA2 PE=1 SV=2 1 81.1355 1.35478E-06 138.09 119.73 138.09 1 S SSLASPDLKMGNLQNSPVNMNPPPLSKMGSL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXPPPPPPPPPPPPPPPPPPXXXX MGNLQNS(1)PVNMNPPPLSK MGNLQNS(81.14)PVNMNPPPLS(-81.14)K 7 3 -0.19117 7510.5 0 0 6341 0 0 8162.4 0 0 6681.6 0 0 7345.4 0 0 9100.1 0 0 7272.1 0 0 8603.9 0 0 7917.7 0 0 12870 0 0 7109.3 0 0 5992.1 0 0 8171.5 0 0 6878.5 0 0 7502 0 0 9031.5 0 0 7423.6 0 0 9037.4 0 0 7785 0 0 12318 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11971000 11971000 0 0 NaN 1872 1080 565 565 2699 2859 3067 3413 3067 3413 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18287 3067 3413 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18287 3067 3413 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18287 Q15596 579 Q15596 Q15596 Nuclear receptor coactivator 2 NCOA2 sp|Q15596|NCOA2_HUMAN Nuclear receptor coactivator 2 OS=Homo sapiens GN=NCOA2 PE=1 SV=2 0.998846 29.3717 0.0469659 52.725 31.571 52.725 1 S NSPVNMNPPPLSKMGSLDSKDCFGLYGEPSE X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX MGS(0.999)LDS(0.001)K MGS(29.37)LDS(-29.37)K 3 2 -0.021993 37051 0 0 20418 0 0 35255 0 0 20318 0 0 28993 0 0 35379 0 0 29997 0 0 28957 0 0 21379 0 0 11911 0 0 35053 0 0 19287 0 0 35528 0 0 21110 0 0 29798 0 0 34732 0 0 30250 0 0 29654 0 0 21460 0 0 11886 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25729000 25729000 0 0 NaN 1873 1080 579 579 2705 2868 3077 3424 3077 3424 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12934 3077 3424 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12934 3077 3424 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12934 Q15596 493 Q15596 Q15596 Nuclear receptor coactivator 2 NCOA2 sp|Q15596|NCOA2_HUMAN Nuclear receptor coactivator 2 OS=Homo sapiens GN=NCOA2 PE=1 SV=2 0.999736 35.7895 0.0190373 64.86 44.16 64.86 1 S NPGQPTSMLSPRHRMSPGVAGSPRIPPSQFS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPXXXXXXX MS(1)PGVAGSPR MS(35.79)PGVAGS(-35.79)PR 2 2 0.14197 23863 0 0 17080 0 0 24762 0 0 19130 0 0 22408 0 0 25079 0 0 20503 0 0 20750 0 0 19161 0 0 5239.5 0 0 22584 0 0 16147 0 0 24850 0 0 19613 0 0 22850 0 0 24828 0 0 20925 0 0 21139 0 0 18963 0 0 5413.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8659400 8659400 0 0 NaN 1874 1080 493 493 2745 2911 3121 3468 3121 3468 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9694 3121 3468 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9694 3121 3468 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9694 Q15633 152 Q15633 Q15633 RISC-loading complex subunit TARBP2 TARBP2 sp|Q15633|TRBP2_HUMAN RISC-loading complex subunit TARBP2 OS=Homo sapiens GN=TARBP2 PE=1 SV=3 0.989143 19.6652 3.18662E-05 124.91 102.98 124.91 1 S VVLTRSPPMELQPPVSPQQSECNPVGALQEL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPPPPPPP SPPMELQPPVS(0.989)PQQS(0.011)ECNPVGALQELVVQK S(-37.56)PPMELQPPVS(19.67)PQQS(-19.67)ECNPVGALQELVVQK 11 4 0.39264 15565 0 0 25043 0 0 15322 0 0 23382 0 0 20590 0 0 18814 0 0 25044 0 0 25916 0 0 25866 0 0 127680 0 0 14727 0 0 23648 0 0 15515 0 0 24036 0 0 20648 0 0 19391 0 0 25301 0 0 29568 0 0 25487 0 0 120820 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 67932000 67932000 0 0 NaN 1875 1081 152 152 4143 4416 4707 5223;5224 4707 5223 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23832 4707 5223 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23832 4707 5223 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23832 Q15637 80 Q15637 Q15637 Splicing factor 1 SF1 sp|Q15637|SF01_HUMAN Splicing factor 1 OS=Homo sapiens GN=SF1 PE=1 SV=4 0.999985 48.6363 8.05361E-08 160.43 138.81 160.43 2 S LRTGDLGIPPNPEDRSPSPEPIYNSEGKRLN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPPPPPPPPXXX TGDLGIPPNPEDRS(1)PS(1)PEPIYNSEGK T(-77.66)GDLGIPPNPEDRS(48.64)PS(40.68)PEPIY(-40.68)NS(-46.2)EGK 14 3 -0.22089 0 52432 0 0 55440 0 0 55200 0 0 53171 0 0 63489 0 0 54093 0 0 60427 0 0 61993 0 0 62576 0 0 127600 0 0 49624 0 0 52359 0 0 55520 0 0 54748 0 0 63898 0 0 54519 0 0 61715 0 0 65723 0 0 61652 0 0 121590 0 0 8 0 0 8 0 0 8 0 0 8 0 0 8 0 0 8 0 0 8 0 0 8 0 0 8 0 0 8 0 56764000 0 56764000 0 NaN 1876 1082 80 80 4718 5029 5356;5357;5358 5951;5952;5953;5954;5955;5956;5957;5958 5358 5958 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18345 5358 5958 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18345 5358 5958 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18345 Q15637 82 Q15637 Q15637 Splicing factor 1 SF1 sp|Q15637|SF01_HUMAN Splicing factor 1 OS=Homo sapiens GN=SF1 PE=1 SV=4 0.999962 45.1592 8.05361E-08 160.43 138.81 118.93 2 S TGDLGIPPNPEDRSPSPEPIYNSEGKRLNTR X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPXXXXX TGDLGIPPNPEDRS(1)PS(1)PEPIYNSEGK T(-49.51)GDLGIPPNPEDRS(49.51)PS(45.16)PEPIY(-45.16)NS(-58.29)EGK 16 4 0.31763 0 52432 0 0 55440 0 0 55200 0 0 53171 0 0 63489 0 0 54093 0 0 60427 0 0 61993 0 0 62576 0 0 127600 0 0 49624 0 0 52359 0 0 55520 0 0 54748 0 0 63898 0 0 54519 0 0 61715 0 0 65723 0 0 61652 0 0 121590 0 0 8 0 0 8 0 0 8 0 0 8 0 0 8 0 0 8 0 0 8 0 0 8 0 0 8 0 0 8 0 56764000 0 56764000 0 NaN 1877 1082 82 82 4718 5029 5356;5357;5358 5951;5952;5953;5954;5955;5956;5957;5958 5357 5954 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18019 5358 5958 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18345 5358 5958 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18345 Q15643 1842 Q15643 Q15643 Thyroid receptor-interacting protein 11 TRIP11 sp|Q15643|TRIPB_HUMAN Thyroid receptor-interacting protein 11 OS=Homo sapiens GN=TRIP11 PE=1 SV=3 0.978678 16.729 0.00136503 98.009 84.779 98.009 1 S GVTRWMTGWLGGGSKSVPNTPLRPNQQSVVN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.979)VPNT(0.021)PLRPNQQS(0.001)VVNSSFSELFVK S(16.73)VPNT(-16.73)PLRPNQQS(-32.63)VVNS(-55.3)S(-64.18)FS(-67.74)ELFVK 1 3 1.2846 9324.5 0 0 11073 0 0 11167 0 0 12019 0 0 10729 0 0 11684 0 0 12738 0 0 12640 0 0 12035 0 0 73406 0 0 8830.2 0 0 10466 0 0 11137 0 0 12277 0 0 10942 0 0 11877 0 0 12851 0 0 14854 0 0 11905 0 0 69413 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18578000 18578000 0 0 NaN 1878 1083 1842 1842 4558 4862 5179 5751 5179 5751 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23112 5179 5751 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23112 5179 5751 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23112 Q15648 1401 Q15648 Q15648 Mediator of RNA polymerase II transcription subunit 1 MED1 sp|Q15648|MED1_HUMAN Mediator of RNA polymerase II transcription subunit 1 OS=Homo sapiens GN=MED1 PE=1 SV=4 0.994359 22.4619 0.00800347 75.849 43.52 75.849 1 S STGVAKIIISKHDGGSPSIKAKVTLQKPGES X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX HDGGS(0.994)PS(0.006)IK HDGGS(22.46)PS(-22.46)IK 5 3 0.16565 16036 0 0 15450 0 0 18181 0 0 16435 0 0 13392 0 0 19509 0 0 11853 0 0 15301 0 0 19620 0 0 2639.7 0 0 15183 0 0 14601 0 0 18123 0 0 16864 0 0 13858 0 0 19370 0 0 12352 0 0 15590 0 0 19030 0 0 2839.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11856000 11856000 0 0 NaN 1879 1084 1401 1401 1701 1794 1938 2160 1938 2160 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7551 1938 2160 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7551 1938 2160 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7551 Q15648 1207 Q15648 Q15648 Mediator of RNA polymerase II transcription subunit 1 MED1 sp|Q15648|MED1_HUMAN Mediator of RNA polymerase II transcription subunit 1 OS=Homo sapiens GN=MED1 PE=1 SV=4 0.998093 27.2664 0.00012606 102.6 85.522 102.6 1 S SPSHSRPPGGSDKLASPMKPVPGTPPSSKAK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX LAS(0.998)PMKPVPGT(0.002)PPSSK LAS(27.27)PMKPVPGT(-27.27)PPS(-48.09)S(-47.39)K 3 3 -0.23187 15192 0 0 15963 0 0 16524 0 0 16751 0 0 10733 0 0 14614 0 0 9154.2 0 0 14620 0 0 17473 0 0 9893.9 0 0 14381 0 0 15084 0 0 16488 0 0 17117 0 0 11220 0 0 14762 0 0 9621.9 0 0 14963 0 0 16888 0 0 9654.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12021000 12021000 0 0 NaN 1880 1084 1207 1207 2295 2424 2608 2914 2608 2914 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15371 2608 2914 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15371 2608 2914 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15371 Q15648 1156 Q15648 Q15648 Mediator of RNA polymerase II transcription subunit 1 MED1 sp|Q15648|MED1_HUMAN Mediator of RNA polymerase II transcription subunit 1 OS=Homo sapiens GN=MED1 PE=1 SV=4 0.84705 7.61532 0.00810599 79.143 57.942 79.143 1 S SQSKNSSQSGGKPGSSPITKHGLSSGSSSTK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPXXXXXXXXXXX NSSQSGGKPGS(0.147)S(0.847)PIT(0.006)K NS(-57.02)S(-50.94)QS(-44.13)GGKPGS(-7.62)S(7.62)PIT(-21.34)K 12 3 -0.057003 23285 0 0 19161 0 0 22128 0 0 19201 0 0 10945 0 0 25599 0 0 11784 0 0 20114 0 0 21139 0 0 15135 0 0 22029 0 0 18101 0 0 22213 0 0 19816 0 0 11788 0 0 25333 0 0 12211 0 0 20844 0 0 20461 0 0 14717 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29181000 29181000 0 0 NaN 1881 1084 1156 1156 2943 3122 3343 3707 3343 3707 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9452 3343 3707 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9452 3343 3707 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9452 Q15651 6 Q15651 Q15651 High mobility group nucleosome-binding domain-containing protein 3 HMGN3 sp|Q15651|HMGN3_HUMAN High mobility group nucleosome-binding domain-containing protein 3 OS=Homo sapiens GN=HMGN3 PE=1 SV=2 1 64.9897 8.84824E-05 126.71 102.55 112.83 1 S __________MPKRKSPENTEGKDGSKVTKQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX S(1)PENTEGK S(64.99)PENT(-64.99)EGK 1 2 0.69978 29101 0 0 18738 0 0 32661 0 0 20454 0 0 45654 0 0 32873 0 0 44196 0 0 32095 0 0 20785 0 0 6777.8 0 0 27551 0 0 17711 0 0 32839 0 0 21096 0 0 45520 0 0 32399 0 0 44417 0 0 32428 0 0 21501 0 0 7124.9 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 118460000 118460000 0 0 NaN 1882 1085 6 6 3305;4092 3506;4363 3743;4653 4159;5166 4653 5166 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6983 3743 4159 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6224 3743 4159 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6224 Q15652 943 Q15652 Q15652 Probable JmjC domain-containing histone demethylation protein 2C JMJD1C sp|Q15652|JHD2C_HUMAN Probable JmjC domain-containing histone demethylation protein 2C OS=Homo sapiens GN=JMJD1C PE=1 SV=2 0.971324 15.393 0.00145239 97.297 67.487 97.297 1 S SSAEPHRPLKITAHSSPPLTKTLVDHHKEEL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX IT(0.001)AHS(0.028)S(0.971)PPLTK IT(-31.97)AHS(-15.39)S(15.39)PPLT(-64.15)K 6 3 0.037151 23892 0 0 10707 0 0 24252 0 0 11594 0 0 11330 0 0 23649 0 0 13807 0 0 13491 0 0 12128 0 0 2933.4 0 0 22610 0 0 10119 0 0 24246 0 0 12044 0 0 12294 0 0 23045 0 0 13890 0 0 14015 0 0 12038 0 0 3074.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 61824000 61824000 0 0 NaN 1883 1086 943 943 1959 2070 2234 2496 2234 2496 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12059 2234 2496 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12059 2234 2496 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12059 Q15652 652 Q15652 Q15652 Probable JmjC domain-containing histone demethylation protein 2C JMJD1C sp|Q15652|JHD2C_HUMAN Probable JmjC domain-containing histone demethylation protein 2C OS=Homo sapiens GN=JMJD1C PE=1 SV=2 0.993631 23.6747 0.000410962 101.35 70.785 101.35 1 S KSSPSPEVVKPKITHSPDSVKSKATYVNSQA X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX IT(0.002)HS(0.994)PDS(0.004)VK IT(-26.74)HS(23.67)PDS(-23.67)VK 4 3 -0.53864 23473 0 0 16215 0 0 22215 0 0 15010 0 0 10722 0 0 22474 0 0 13559 0 0 18255 0 0 15627 0 0 3643.2 0 0 22206 0 0 15311 0 0 22306 0 0 15605 0 0 11601 0 0 22147 0 0 13722 0 0 18584 0 0 15332 0 0 3853 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24478000 24478000 0 0 NaN 1884 1086 652 652 1961 2072 2236 2498 2236 2498 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9534 2236 2498 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9534 2236 2498 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9534 Q15652 617 Q15652 Q15652 Probable JmjC domain-containing histone demethylation protein 2C JMJD1C sp|Q15652|JHD2C_HUMAN Probable JmjC domain-containing histone demethylation protein 2C OS=Homo sapiens GN=JMJD1C PE=1 SV=2 0.999805 37.0973 0.0489983 51.092 20.838 51.092 1 S PLSAVSVMEDKLHKRSPPPETIKSKLNTSVD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX S(1)PPPETIK S(37.1)PPPET(-37.1)IK 1 2 -0.4636 71571 0 0 42349 0 0 72091 0 0 35869 0 0 33220 0 0 70121 0 0 34232 0 0 45248 0 0 36076 0 0 7852.3 0 0 67727 0 0 39969 0 0 72088 0 0 37775 0 0 36023 0 0 68460 0 0 34847 0 0 46588 0 0 35518 0 0 8441.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 79958000 79958000 0 0 NaN 1885 1086 617 617 4144 4417 4708 5225 4708 5225 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11395 4708 5225 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11395 4708 5225 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11395 Q15652 641 Q15652 Q15652 Probable JmjC domain-containing histone demethylation protein 2C JMJD1C sp|Q15652|JHD2C_HUMAN Probable JmjC domain-containing histone demethylation protein 2C OS=Homo sapiens GN=JMJD1C PE=1 SV=2 0.787407 6.56129 0.000162654 103.83 73.006 103.83 1 S KLNTSVDTHKIKSSPSPEVVKPKITHSPDSV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX S(0.039)S(0.174)PS(0.787)PEVVKPK S(-13.08)S(-6.56)PS(6.56)PEVVKPK 4 3 1.5411 28128 0 0 18724 0 0 28340 0 0 18982 0 0 14544 0 0 30999 0 0 13490 0 0 21021 0 0 20720 0 0 5571.8 0 0 26617 0 0 17690 0 0 28354 0 0 19667 0 0 15566 0 0 30421 0 0 13980 0 0 21640 0 0 20138 0 0 5733 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26092000 26092000 0 0 NaN 1886 1086 641 641 4400 4688 4992 5539 4992 5539 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11404 4992 5539 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11404 4992 5539 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11404 Q15652 2053 Q15652 Q15652 Probable JmjC domain-containing histone demethylation protein 2C JMJD1C sp|Q15652|JHD2C_HUMAN Probable JmjC domain-containing histone demethylation protein 2C OS=Homo sapiens GN=JMJD1C PE=1 SV=2 0.458409 0 8.84445E-07 141.55 109.48 141.55 S EEREQDNSESPNGRTSPLVSQNNEQGSTLRD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T(0.458)S(0.458)PLVS(0.083)QNNEQGSTLR T(0)S(0)PLVS(-7.41)QNNEQGS(-119.92)T(-122.68)LR 2 3 0.72302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1887 1086 2053 2053 4939 5264 5607 6231 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11694 5607 6231 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11694 5607 6231 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11694 Q15652 1057 Q15652 Q15652 Probable JmjC domain-containing histone demethylation protein 2C JMJD1C sp|Q15652|JHD2C_HUMAN Probable JmjC domain-containing histone demethylation protein 2C OS=Homo sapiens GN=JMJD1C PE=1 SV=2 0.823928 6.73651 3.72942E-09 188.6 127.01 188.6 1 S LEGERENYSRVASSSSSPKSHIIKQDMDVER X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX VASS(0.001)S(0.001)S(0.824)S(0.175)PK VAS(-56.35)S(-30.63)S(-30.84)S(6.74)S(-6.74)PK 6 2 -0.66043 35496 0 0 19488 0 0 35767 0 0 18498 0 0 12421 0 0 38484 0 0 12765 0 0 23245 0 0 20094 0 0 3511.4 0 0 33590 0 0 18404 0 0 35715 0 0 19374 0 0 13995 0 0 37498 0 0 13178 0 0 24012 0 0 19515 0 0 3844.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30317000 30317000 0 0 NaN 1888 1086 1057 1057 5059 5393 5745 6384 5745 6384 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7485 5745 6384 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7485 5745 6384 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7485 Q15696 349 Q15696 Q15696 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 ZRSR2 sp|Q15696|U2AFM_HUMAN U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 OS=Homo sapiens GN=ZRSR2 PE=1 SV=2 1 73.2802 0.000442195 128.81 103.25 128.81 1 S NPNNEFWEANRDIYLSPDRTGSSFGKNSERR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX DIYLS(1)PDR DIY(-73.28)LS(73.28)PDR 5 2 0.26267 22114 0 0 26717 0 0 20733 0 0 29668 0 0 16886 0 0 22355 0 0 18987 0 0 26682 0 0 29484 0 0 11369 0 0 20920 0 0 25256 0 0 20913 0 0 30164 0 0 17403 0 0 22809 0 0 19513 0 0 26939 0 0 28647 0 0 11323 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 47720000 47720000 0 0 NaN 1889 1088 349 349 713 757 808 894 808 894 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14553 808 894 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14553 808 894 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14553 Q15717 202 Q15717 Q15717 ELAV-like protein 1 ELAVL1 sp|Q15717|ELAV1_HUMAN ELAV-like protein 1 OS=Homo sapiens GN=ELAVL1 PE=1 SV=2 0.999991 50.4362 1.71408E-07 168.79 139.81 130.25 1 S PNQNKNVALLSQLYHSPARRFGGPVHHQAQR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPXXXXXXXXXXX NVALLSQLYHS(1)PARR NVALLS(-78.2)QLY(-50.44)HS(50.44)PARR 11 3 0.0045408 10659 0 0 11014 0 0 11166 0 0 11990 0 0 8643.3 0 0 11969 0 0 9064.8 0 0 10773 0 0 11277 0 0 11566 0 0 10088 0 0 10410 0 0 11185 0 0 12251 0 0 8928.3 0 0 12005 0 0 9267.5 0 0 11201 0 0 11033 0 0 11140 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 81095000 81095000 0 0 NaN 1890 1089 202 202 2953;2954 3132;3133 3354;3355 3719;3720 3355 3720 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17475 3354 3719 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19144 3354 3719 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19144 Q15723 422 Q15723 Q15723 ETS-related transcription factor Elf-2 ELF2 sp|Q15723|ELF2_HUMAN ETS-related transcription factor Elf-2 OS=Homo sapiens GN=ELF2 PE=1 SV=2 0.330022 1.178 0.00414943 89.773 67.46 89.773 S TVAVQSVNAGAPLITSTSPTTATSPKVVIQT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPXXXXX ISTVAVQSVNAGAPLIT(0.073)S(0.33)T(0.252)S(0.252)PT(0.073)T(0.017)AT(0.004)SPK IS(-70.55)T(-71.63)VAVQS(-51.52)VNAGAPLIT(-6.56)S(1.18)T(-1.18)S(-1.18)PT(-6.56)T(-13)AT(-19.32)S(-28.36)PK 18 4 -0.19739 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1891 1090 422 422 1955 2066 2230 2491 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20363 2230 2491 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20363 2230 2491 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20363 Q15723 185 Q15723 Q15723 ETS-related transcription factor Elf-2 ELF2 sp|Q15723|ELF2_HUMAN ETS-related transcription factor Elf-2 OS=Homo sapiens GN=ELF2 PE=1 SV=2 0.76933 5.40162 0.000103842 109.32 79.776 109.32 1 S PMKKKKVGRKPKTQQSPISNGSPELGIKKKP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPXXX T(0.222)QQS(0.769)PIS(0.009)NGSPELGIK T(-5.4)QQS(5.4)PIS(-19.4)NGS(-41.87)PELGIK 4 3 -0.42447 9531.2 0 0 9976.3 0 0 10060 0 0 11368 0 0 10164 0 0 10590 0 0 10021 0 0 8934.3 0 0 9984.8 0 0 7960.2 0 0 9021 0 0 9432.1 0 0 10100 0 0 11575 0 0 10306 0 0 10643 0 0 10207 0 0 9265.7 0 0 9853.6 0 0 7702.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9768600 9768600 0 0 NaN 1892 1090 185 185 4880 5205 5545 6163 5545 6163 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15825 5545 6163 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15825 5545 6163 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15825 Q15742 6 Q15742 Q15742 NGFI-A-binding protein 2 NAB2 sp|Q15742|NAB2_HUMAN NGFI-A-binding protein 2 OS=Homo sapiens GN=NAB2 PE=1 SV=1 0.996711 24.8156 9.36033E-16 227 203.52 227 1 S __________MHRAPSPTAEQPPGGGDSARR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX APS(0.997)PT(0.003)AEQPPGGGDSAR APS(24.82)PT(-24.82)AEQPPGGGDS(-137.77)AR 3 2 0.24405 6389.7 0 0 5963.4 0 0 5724.4 0 0 6137.3 0 0 3761.4 0 0 4675.6 0 0 4086.4 0 0 5218.3 0 0 6387.6 0 0 2266.1 0 0 6043.8 0 0 5634.4 0 0 5779 0 0 6267.5 0 0 3939.7 0 0 4762.9 0 0 4207 0 0 5281.6 0 0 6205 0 0 2254.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8243700 8243700 0 0 NaN 1893 1091 6 6 374 400 435 483 435 483 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7904 435 483 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7904 435 483 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7904 Q15751 2745 Q15751 Q15751 Probable E3 ubiquitin-protein ligase HERC1 HERC1 sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1 PE=1 SV=2 0.410277 0.977399 3.88571E-08 157.68 140.34 157.68 S RPANRTALSDPSSRLSTSPPPPAIAVPLLEM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M) XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP LS(0.41)T(0.328)S(0.262)PPPPAIAVPLLEMGFSLR LS(0.98)T(-0.98)S(-1.95)PPPPAIAVPLLEMGFS(-156.16)LR 2 3 -0.70211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1894 1092 2745 2745 2605 2751;2752 2951 3288 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24454 2951 3288 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24454 2951 3288 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24454 Q15751 2720 Q15751 Q15751 Probable E3 ubiquitin-protein ligase HERC1 HERC1 sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1 PE=1 SV=2 0.998735 28.9838 0.000660742 100.18 58.142 100.18 1 S SSLPTSPSDEVGRRQSLTSPDSQSARPANRT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX RQS(0.999)LT(0.001)SPDSQSAR RQS(28.98)LT(-28.98)S(-54.68)PDS(-80.91)QS(-91.36)AR 3 3 -0.16307 6422.7 0 0 8990.1 0 0 6970.6 0 0 7204.6 0 0 9138.5 0 0 6425.3 0 0 9003.8 0 0 8450.5 0 0 8387.8 0 0 2302 0 0 6079.6 0 0 8482.4 0 0 7013.8 0 0 7493.9 0 0 9143.2 0 0 6504.9 0 0 9154.6 0 0 8467.3 0 0 8302.3 0 0 2363.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10794000 10794000 0 0 NaN 1895 1092 2720 2720 3423 3635 3877 4303 3877 4303 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6282 3877 4303 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6282 3877 4303 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6282 Q15751 1491 Q15751 Q15751 Probable E3 ubiquitin-protein ligase HERC1 HERC1 sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1 PE=1 SV=2 0.949509 13.0758 0.0123722 77.867 45.833 77.867 1 S STSASEGGGLMTRSESLTAESRLVHTSPNYR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX S(0.004)ES(0.95)LT(0.047)AESR S(-24.07)ES(13.08)LT(-13.08)AES(-51.89)R 3 2 -0.49768 14756 0 0 19578 0 0 15014 0 0 17960 0 0 19853 0 0 16901 0 0 20063 0 0 19403 0 0 20774 0 0 4290.7 0 0 13964 0 0 18485 0 0 15163 0 0 18522 0 0 19865 0 0 17027 0 0 20431 0 0 19495 0 0 20467 0 0 4489.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15879000 15879000 0 0 NaN 1896 1092 1491 1491 3707 3942 4202 4669 4202 4669 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7855 4202 4669 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7855 4202 4669 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7855 Q15773 238 Q15773 Q15773 Myeloid leukemia factor 2 MLF2 sp|Q15773|MLF2_HUMAN Myeloid leukemia factor 2 OS=Homo sapiens GN=MLF2 PE=1 SV=1 0.99469 22.726 1.04101E-10 184.22 120 184.22 1 S RAEGPPRLAIQGPEDSPSRQSRRYDW_____ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPXXXXXXXXXXXX LAIQGPEDS(0.995)PS(0.005)R LAIQGPEDS(22.73)PS(-22.73)R 9 2 0.63341 27249 0 0 53757 0 0 28130 0 0 51456 0 0 24455 0 0 27002 0 0 30548 0 0 37162 0 0 60982 0 0 53679 0 0 25788 0 0 50769 0 0 28241 0 0 52581 0 0 25149 0 0 28385 0 0 31636 0 0 38500 0 0 58880 0 0 51406 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 66598000 66598000 0 0 NaN 1897 1094 238 238 2287 2416 2600 2905 2600 2905 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13835 2600 2905 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13835 2600 2905 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13835 Q15776 193 Q15776 Q15776 Zinc finger protein with KRAB and SCAN domains 8 ZKSCAN8 sp|Q15776|ZKSC8_HUMAN Zinc finger protein with KRAB and SCAN domains 8 OS=Homo sapiens GN=ZKSCAN8 PE=1 SV=2 0.990119 20.3478 3.57015E-06 142.89 96.894 142.89 1 S PVPQESQERAMSTSQSPTRSQKGSSGDQEMT X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX AMSTS(0.001)QS(0.99)PT(0.009)R AMS(-52.99)T(-39.68)S(-31.96)QS(20.35)PT(-20.35)R 7 2 0.21658 10298 0 0 11759 0 0 10130 0 0 11749 0 0 8434.3 0 0 9946.7 0 0 8002.7 0 0 11617 0 0 10909 0 0 5381 0 0 9743.7 0 0 11108 0 0 10189 0 0 12035 0 0 8655.9 0 0 10082 0 0 8246.4 0 0 11750 0 0 10641 0 0 5335.8 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 10425000 10425000 0 0 NaN 1898 1095 193 193 336 360;361 388;389 429;430 389 430 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6502 389 430 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6502 389 430 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6502 Q15831 31 Q15831 Q15831 Serine/threonine-protein kinase STK11 STK11 sp|Q15831|STK11_HUMAN Serine/threonine-protein kinase STK11 OS=Homo sapiens GN=STK11 PE=1 SV=1 0.552914 0.92266 6.59536E-08 174.29 137.62 174.29 1 S ELMSVGMDTFIHRIDSTEVIYQPRRKRAKLI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX IDS(0.553)T(0.447)EVIYQPR IDS(0.92)T(-0.92)EVIY(-80.69)QPR 3 2 -0.71793 15762 0 0 22827 0 0 16580 0 0 19309 0 0 20988 0 0 17204 0 0 24794 0 0 23191 0 0 22793 0 0 26112 0 0 14918 0 0 21544 0 0 16709 0 0 20006 0 0 21090 0 0 17463 0 0 25000 0 0 23817 0 0 22575 0 0 25125 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30140000 30140000 0 0 NaN 1899 1097 31 31 1799 1899 2046 2282 2046 2282 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15816 2046 2282 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15816 2046 2282 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15816 Q15910 362 Q15910 Q15910 Histone-lysine N-methyltransferase EZH2 EZH2 sp|Q15910|EZH2_HUMAN Histone-lysine N-methyltransferase EZH2 OS=Homo sapiens GN=EZH2 PE=1 SV=2 0.498265 0 5.51739E-08 158.94 92.691 158.94 S PKRPGGRRRGRLPNNSSRPSTPTINVLESKD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPPPX GRLPNNS(0.498)S(0.498)RPS(0.002)T(0.002)PTINVLESK GRLPNNS(0)S(0)RPS(-24.63)T(-24.63)PT(-41.57)INVLES(-145.48)K 7 4 -2.2792 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1900 1098 362 362 1587;2502 1672;1673;2641;2642 1808 2009 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15648 1808 2009 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15648 1808 2009 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15648 Q15910 363 Q15910 Q15910 Histone-lysine N-methyltransferase EZH2 EZH2 sp|Q15910|EZH2_HUMAN Histone-lysine N-methyltransferase EZH2 OS=Homo sapiens GN=EZH2 PE=1 SV=2 0.668214 4.42682 2.40657E-11 181.03 145.33 181.03 2 S KRPGGRRRGRLPNNSSRPSTPTINVLESKDT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPXX GRLPNNS(0.332)S(0.668)RPS(0.003)T(0.773)PT(0.224)INVLESK GRLPNNS(-4.43)S(4.43)RPS(-24.23)T(6.55)PT(-6.55)INVLES(-118.99)K 8 4 -0.3453 0 26394 0 0 17902 0 0 25271 0 0 17410 0 0 23743 0 0 24167 0 0 25536 0 0 23605 0 0 18891 0 0 20259 0 0 24972 0 0 16908 0 0 25495 0 0 18014 0 0 24204 0 0 23954 0 0 25726 0 0 24310 0 0 18922 0 0 19623 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 88685000 0 88685000 0 NaN 1901 1098 363 363 1587;2502 1672;1673;2641;2642 1809;2837 2010;3165 1809 2010 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16080 1809 2010 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16080 1809 2010 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16080 Q15910 366 Q15910 Q15910 Histone-lysine N-methyltransferase EZH2 EZH2 sp|Q15910|EZH2_HUMAN Histone-lysine N-methyltransferase EZH2 OS=Homo sapiens GN=EZH2 PE=1 SV=2 0.59865 1.97131 2.20507E-11 185.28 141.98 185.28 1 S GGRRRGRLPNNSSRPSTPTINVLESKDTDSD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPPXXXXX GRLPNNS(0.01)S(0.01)RPS(0.599)T(0.38)PTINVLESK GRLPNNS(-17.56)S(-17.56)RPS(1.97)T(-1.97)PT(-36.41)INVLES(-137.78)K 11 4 0.20236 8898.8 0 0 9017.5 0 0 9187.1 0 0 9392.6 0 0 10158 0 0 9202.5 0 0 9209.7 0 0 10240 0 0 10005 0 0 3569.8 0 0 8421.6 0 0 8520.7 0 0 9244.4 0 0 9618 0 0 10239 0 0 9252.4 0 0 9442 0 0 10339 0 0 9838.5 0 0 3598.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 58260000 58260000 0 0 NaN 1902 1098 366 366 1587;2502 1672;1673;2641;2642 1807 2008 1807 2008 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14915 1807 2008 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14915 1807 2008 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14915 Q15942 281 Q15942 Q15942 Zyxin ZYX sp|Q15942|ZYX_HUMAN Zyxin OS=Homo sapiens GN=ZYX PE=1 SV=1 1 63.248 5.24609E-18 240.4 222.15 180.32 1 S FSPVTPKFTPVASKFSPGAPGGSGSQPNQKL X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPPPPPX FS(1)PGAPGGSGSQPNQK FS(63.25)PGAPGGS(-63.25)GS(-114.37)QPNQK 2 3 0.096938 33871 0 0 28552 0 0 35506 0 0 29103 0 0 29776 0 0 37286 0 0 32981 0 0 35730 0 0 30003 0 0 16882 0 0 32057 0 0 26975 0 0 35594 0 0 29980 0 0 30598 0 0 37020 0 0 33337 0 0 36409 0 0 29730 0 0 16723 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 125060000 125060000 0 0 NaN 1903 1099 281 281 1322;1337 1395;1410 1501;1517 1663;1680 1501 1663 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11992 1517 1680 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16855 1517 1680 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16855 Q15942 290 Q15942 Q15942 Zyxin ZYX sp|Q15942|ZYX_HUMAN Zyxin OS=Homo sapiens GN=ZYX PE=1 SV=1 0.990359 20.1169 0.000113509 106.57 87.247 106.57 1 S PVASKFSPGAPGGSGSQPNQKLGHPEALSAG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPXXXXXXXXXX FSPGAPGGS(0.01)GS(0.99)QPNQK FS(-68.3)PGAPGGS(-20.12)GS(20.12)QPNQK 11 3 0.68975 9088.7 0 0 8442.9 0 0 9285.7 0 0 9228.7 0 0 12956 0 0 9885.9 0 0 15007 0 0 10447 0 0 9580.1 0 0 6436 0 0 8601 0 0 7980.1 0 0 9387.6 0 0 9438.4 0 0 12955 0 0 9899 0 0 15029 0 0 10651 0 0 9682.9 0 0 6302 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12222000 12222000 0 0 NaN 1904 1099 290 290 1322;1337 1395;1410 1502 1664 1502 1664 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12283 1502 1664 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12283 1502 1664 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12283 Q15942 267 Q15942 Q15942 Zyxin ZYX sp|Q15942|ZYX_HUMAN Zyxin OS=Homo sapiens GN=ZYX PE=1 SV=1 0.999981 47.3011 0.000856761 125.82 95.149 125.82 1 S PRGPPASSPAPAPKFSPVTPKFTPVASKFSP X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXXXXXPPPPPPPXXXXXXXXXX FS(1)PVTPK FS(47.3)PVT(-47.3)PK 2 2 0.072246 26150 0 0 19460 0 0 25472 0 0 19004 0 0 24363 0 0 22310 0 0 25216 0 0 23078 0 0 19248 0 0 8311.1 0 0 24742 0 0 18381 0 0 25676 0 0 19594 0 0 24796 0 0 22240 0 0 25463 0 0 23369 0 0 19245 0 0 8360 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 205340000 205340000 0 0 NaN 1905 1099 267 267 1327 1400 1507 1669 1507 1669 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15477 1507 1669 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15477 1507 1669 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15477 Q15942 259 Q15942 Q15942 Zyxin ZYX sp|Q15942|ZYX_HUMAN Zyxin OS=Homo sapiens GN=ZYX PE=1 SV=1 0.859974 7.88277 3.1414E-07 158.58 120.28 158.58 1 S PVSLANTQPRGPPASSPAPAPKFSPVTPKFT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX GPPAS(0.14)S(0.86)PAPAPK GPPAS(-7.88)S(7.88)PAPAPK 6 2 0.68072 24283 0 0 21084 0 0 27138 0 0 19133 0 0 12437 0 0 26166 0 0 12100 0 0 17945 0 0 19690 0 0 4400.3 0 0 22988 0 0 19906 0 0 26982 0 0 19877 0 0 13491 0 0 25819 0 0 12541 0 0 18451 0 0 19106 0 0 4558.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21637000 21637000 0 0 NaN 1906 1099 259 259 1550 1632 1761 1955 1761 1955 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9007 1761 1955 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9007 1761 1955 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9007 Q15942 308 Q15942 Q15942 Zyxin ZYX sp|Q15942|ZYX_HUMAN Zyxin OS=Homo sapiens GN=ZYX PE=1 SV=1 0.961072 13.9254 2.82717E-12 198.99 178.73 198.99 1 S NQKLGHPEALSAGTGSPQPPSFTYAQQREKP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPPPPPXXX LGHPEALSAGT(0.039)GS(0.961)PQPPSFTYAQQR LGHPEALS(-53.65)AGT(-13.93)GS(13.93)PQPPS(-109.8)FT(-119.32)Y(-141.16)AQQR 13 3 0.92402 8160.3 0 0 9748.2 0 0 8465.9 0 0 8218.7 0 0 8489.1 0 0 8518.2 0 0 9682.7 0 0 10973 0 0 9968.4 0 0 26615 0 0 7722.8 0 0 9200.1 0 0 8509.7 0 0 8536.9 0 0 8630.6 0 0 8605.7 0 0 9806.7 0 0 11713 0 0 9823.7 0 0 25315 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 32052000 32052000 0 0 NaN 1907 1099 308 308 2370 2503 2692 3005;3006 2692 3006 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16089 2692 3006 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16089 2692 3006 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16089 Q15942 344 Q15942 Q15942 Zyxin ZYX sp|Q15942|ZYX_HUMAN Zyxin OS=Homo sapiens GN=ZYX PE=1 SV=1 1 88.9382 1.23074E-06 143.42 97.423 143.42 1 S QHPVPPPAQNQNQVRSPGAPGPLTLKEVEEL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPXXXXX S(1)PGAPGPLTLK S(88.94)PGAPGPLT(-88.94)LK 1 2 0.058627 53022 0 0 35815 0 0 60515 0 0 35304 0 0 34026 0 0 55236 0 0 43977 0 0 44734 0 0 37941 0 0 34439 0 0 50201 0 0 33830 0 0 60199 0 0 36600 0 0 36229 0 0 54409 0 0 44121 0 0 46317 0 0 37692 0 0 33464 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 282540000 282540000 0 0 NaN 1908 1099 344 344 4098 4369 4659 5172;5173 4659 5172 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17246 4659 5172 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17246 4659 5172 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17246 Q15942 142 Q15942 Q15942 Zyxin ZYX sp|Q15942|ZYX_HUMAN Zyxin OS=Homo sapiens GN=ZYX PE=1 SV=1 0.499443 0 0.0317413 53.589 30.26 53.589 S PEAPIPPPPQPREKVSSIDLEIDSLSSLLDD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP VS(0.499)S(0.499)IDLEIDS(0.001)LSSLLDDMTK VS(0)S(0)IDLEIDS(-26.8)LS(-40.54)S(-43.6)LLDDMT(-50.49)K 2 3 -0.082875 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1909 1099 142 142 5273 5619;5620 5990 6655 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24266 5990 6655 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24266 5990 6655 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24266 Q15942 143 Q15942 Q15942 Zyxin ZYX sp|Q15942|ZYX_HUMAN Zyxin OS=Homo sapiens GN=ZYX PE=1 SV=1 0.867079 8.14466 9.12725E-13 212.65 189.77 212.65 1 S EAPIPPPPQPREKVSSIDLEIDSLSSLLDDM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP VS(0.133)S(0.867)IDLEIDSLSSLLDDMTK VS(-8.14)S(8.14)IDLEIDS(-123.6)LS(-145.75)S(-165.57)LLDDMT(-202.23)K 3 3 0.2266 2624.8 0 0 968.9 0 0 3049.2 0 0 2550.5 0 0 1620.7 0 0 3381.2 0 0 1593.7 0 0 2751.2 0 0 2100.3 0 0 43697 0 0 2485.4 0 0 924.3 0 0 3028.5 0 0 2535.6 0 0 1729.2 0 0 3426.5 0 0 1637.4 0 0 4100.8 0 0 2050.9 0 0 41210 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 7357400 7357400 0 0 NaN 1910 1099 143 143 5273 5619;5620 5991 6656;6657 5991 6656 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24574 5991 6656 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24574 5991 6656 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24574 Q16181 334 Q16181 Q16181 Septin-7 SEPT7 sp|Q16181|SEPT7_HUMAN Septin-7 OS=Homo sapiens GN=SEPT7 PE=1 SV=2 1 147.067 7.57531E-07 147.07 75.844 147.07 1 S YNGVDNNKNKGQLTKSPLAQMEEERREHVAK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPXXXXX S(1)PLAQMEEERR S(147.07)PLAQMEEERR 1 3 -0.10576 10098 0 0 8436.5 0 0 10321 0 0 7139.7 0 0 7355.6 0 0 10324 0 0 8152.6 0 0 8324 0 0 8359.3 0 0 1659.1 0 0 9556.3 0 0 7962.3 0 0 10345 0 0 7461.1 0 0 7651 0 0 10184 0 0 8266 0 0 8477 0 0 8239.4 0 0 1754.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15446000 15446000 0 0 NaN 1911 1100 334 334 4126 4399 4690 5206 4690 5206 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12177 4690 5206 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12177 4690 5206 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12177 Q16204 240 Q16204 Q16204 Coiled-coil domain-containing protein 6 CCDC6 sp|Q16204|CCDC6_HUMAN Coiled-coil domain-containing protein 6 OS=Homo sapiens GN=CCDC6 PE=1 SV=2 1 54.1432 0.036939 54.143 38.254 54.143 2 S EAEKRILQEKLDQPVSAPPSPRDISMEIDSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX LDQPVS(1)APPS(1)PR LDQPVS(54.14)APPS(54.14)PR 6 3 -0.89169 0 8436.5 0 0 7463.9 0 0 9815.7 0 0 7789.5 0 0 6381 0 0 9583.2 0 0 5165.6 0 0 8091.4 0 0 8045.8 0 0 2039.7 0 0 7988.2 0 0 7052.7 0 0 9760.3 0 0 8006.9 0 0 6663.7 0 0 9510.8 0 0 5395.3 0 0 8235.5 0 0 7816.6 0 0 2107.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 11290000 0 11290000 0 NaN 1912 1101 240 240 2315 2447;2448 2637 2948 2637 2948 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12538 2637 2948 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12538 2637 2948 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12538 Q16204 244 Q16204 Q16204 Coiled-coil domain-containing protein 6 CCDC6 sp|Q16204|CCDC6_HUMAN Coiled-coil domain-containing protein 6 OS=Homo sapiens GN=CCDC6 PE=1 SV=2 1 54.1432 6.57642E-07 139.49 109.97 54.143 1;2 S RILQEKLDQPVSAPPSPRDISMEIDSPENMM X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX LDQPVS(1)APPS(1)PR LDQPVS(54.14)APPS(54.14)PR 10 3 -0.89169 39843 8436.5 0 48646 7463.9 0 41971 9815.7 0 46563 7789.5 0 35960 6381 0 39059 9583.2 0 33287 5165.6 0 40893 8091.4 0 47473 8045.8 0 59933 2039.7 0 37710 7988.2 0 45942 7052.7 0 42062 9760.3 0 47816 8006.9 0 36823 6663.7 0 39622 9510.8 0 34400 5395.3 0 42753 8235.5 0 46240 7816.6 0 57380 2107.8 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 69800000 58510000 11290000 0 NaN 1913 1101 244 244 2315 2447;2448 2636;2637 2946;2947;2948 2637 2948 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12538 2636 2946 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12063 2636 2946 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12063 Q16204 323 Q16204 Q16204 Coiled-coil domain-containing protein 6 CCDC6 sp|Q16204|CCDC6_HUMAN Coiled-coil domain-containing protein 6 OS=Homo sapiens GN=CCDC6 PE=1 SV=2 0.891551 11.2808 0.000169628 116.06 95.255 116.06 1 S LQREMERREALCRQLSESESSLEMDDERYFN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX QLS(0.892)ES(0.066)ES(0.041)S(0.001)LEMDDER QLS(11.28)ES(-11.28)ES(-13.34)S(-30.59)LEMDDER 3 2 -0.61411 6902.2 0 0 5299.6 0 0 7310.1 0 0 5703.9 0 0 6553 0 0 7301.7 0 0 7958.8 0 0 8497.5 0 0 6872.6 0 0 19434 0 0 6532.8 0 0 5008.7 0 0 7330.8 0 0 5857.6 0 0 6713.6 0 0 7299.2 0 0 8004.1 0 0 9062.9 0 0 6827.2 0 0 18496 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8188700 8188700 0 0 NaN 1914 1101 323 323 3071 3257 3485 3861 3485 3861 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13873 3485 3861 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13873 3485 3861 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13873 Q16204 419 Q16204 Q16204 Coiled-coil domain-containing protein 6 CCDC6 sp|Q16204|CCDC6_HUMAN Coiled-coil domain-containing protein 6 OS=Homo sapiens GN=CCDC6 PE=1 SV=2 0.992442 21.1829 0.000862772 104.24 76.502 65.5 1 S GTSHGITRPSPRRSNSPDKFKRPTPPPSPNT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX RS(0.008)NS(0.992)PDK RS(-21.18)NS(21.18)PDK 4 3 -0.36142 139840 0 0 119280 0 0 142040 0 0 116100 0 0 113040 0 0 136810 0 0 125220 0 0 127000 0 0 130870 0 0 17327 0 0 132330 0 0 112660 0 0 142570 0 0 119730 0 0 116610 0 0 136120 0 0 127040 0 0 128290 0 0 128890 0 0 19254 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 213460000 213460000 0 0 NaN 1915 1101 419 419 3474;3475;4061 3690;3691;4331 3936;3937;4620 4371;4372;4373;5130 3936 4371 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5256 4620 5130 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11081 4620 5130 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11081 Q16204 52 Q16204 Q16204 Coiled-coil domain-containing protein 6 CCDC6 sp|Q16204|CCDC6_HUMAN Coiled-coil domain-containing protein 6 OS=Homo sapiens GN=CCDC6 PE=1 SV=2 1 83.7502 5.55112E-11 196.11 177.52 196.11 1 S GGGGGGGGKSGGIVISPFRLEELTNRLASLQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPXXXXX SGGIVIS(1)PFRLEELTNR S(-83.75)GGIVIS(83.75)PFRLEELT(-103.98)NR 7 3 0.23397 16649 0 0 18805 0 0 17489 0 0 17306 0 0 14408 0 0 17604 0 0 13132 0 0 15613 0 0 18978 0 0 20295 0 0 15757 0 0 17756 0 0 17522 0 0 17865 0 0 14791 0 0 17646 0 0 13588 0 0 16349 0 0 18478 0 0 19472 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 70998000 70998000 0 0 NaN 1916 1101 52 52 3783;3784 4030;4031 4299;4300 4778;4779 4300 4779 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22430 4300 4779 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22430 4300 4779 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22430 Q16204 352 Q16204 Q16204 Coiled-coil domain-containing protein 6 CCDC6 sp|Q16204|CCDC6_HUMAN Coiled-coil domain-containing protein 6 OS=Homo sapiens GN=CCDC6 PE=1 SV=2 0.841529 7.81138 1.24256E-10 175.74 151.67 175.74 2 S FNEMSAQGLRPRTVSSPIPYTPSPSSSRPIS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY) XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP T(0.018)VS(0.14)S(0.842)PIPYT(0.002)PS(0.027)PS(0.083)S(0.072)S(0.063)RPIS(0.753)PGLS(0.001)YASHTVGFTPPTSLTR T(-16.64)VS(-7.81)S(7.81)PIPY(-38.62)T(-26.31)PS(-14.4)PS(-9.6)S(-10.21)S(-10.81)RPIS(9.6)PGLS(-30.5)Y(-69.55)AS(-51.53)HT(-70.12)VGFT(-111.91)PPT(-122.37)S(-123.53)LT(-123.53)R 4 4 0.17448 0 6969.3 0 0 9450.1 0 0 6205.7 0 0 8759.4 0 0 8059.4 0 0 7317.2 0 0 12115 0 0 13377 0 0 8876.7 0 0 80188 0 0 6591.9 0 0 8923.3 0 0 6323 0 0 9012.8 0 0 8123.6 0 0 7625.7 0 0 12049 0 0 15599 0 0 8896 0 0 75816 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 16307000 0 16307000 0 NaN 1917 1101 352 352 5020 5352;5353 5705 6338;6339;6340;6341 5705 6340 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20919 5705 6340 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20919 5705 6340 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20919 Q16204 367 Q16204 Q16204 Coiled-coil domain-containing protein 6 CCDC6 sp|Q16204|CCDC6_HUMAN Coiled-coil domain-containing protein 6 OS=Homo sapiens GN=CCDC6 PE=1 SV=2 0.902025 14.7191 3.23508E-46 348.25 319.06 348.25 1;2 S SPIPYTPSPSSSRPISPGLSYASHTVGFTPP Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP TVSSPIPYT(0.005)PS(0.002)PS(0.03)S(0.03)S(0.03)RPIS(0.902)PGLSYASHTVGFTPPTSLTR T(-114.62)VS(-106.98)S(-99.25)PIPY(-135.75)T(-22.56)PS(-27.3)PS(-14.72)S(-14.72)S(-14.72)RPIS(14.72)PGLS(-74.97)Y(-175.74)AS(-137.44)HT(-179.42)VGFT(-206.86)PPT(-242.64)S(-247.92)LT(-245.91)R 19 4 0.35525 6986 6969.3 0 8071.3 9450.1 0 7384.2 6205.7 0 8188.8 8759.4 0 6757.8 8059.4 0 14005 7317.2 0 16884 12115 0 17184 13377 0 9280.2 8876.7 0 54642 80188 0 6612.1 6591.9 0 7625.3 8923.3 0 7424 6323 0 8494.3 9012.8 0 7030.8 8123.6 0 13921 7625.7 0 16492 12049 0 18760 15599 0 9479.3 8896 0 51849 75816 0 3 4 0 3 4 0 3 4 0 3 4 0 3 4 0 3 4 0 3 4 0 3 4 0 3 4 0 3 4 0 68789000 52482000 16307000 0 NaN 1918 1101 367 367 5020 5352;5353 5704;5705 6335;6336;6337;6338;6339;6340;6341 5704 6337 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20619 5704 6337 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20619 5704 6337 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20619 Q16512 537 Q16512 Q16512 Serine/threonine-protein kinase N1 PKN1 sp|Q16512|PKN1_HUMAN Serine/threonine-protein kinase N1 OS=Homo sapiens GN=PKN1 PE=1 SV=2 0.968363 17.4763 3.66577E-08 158.72 130.21 158.72 1 S LIPNATGTGTFSPGASPGSEARTTGDISVEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPXXXXXXXXX LIPNATGTGTFS(0.017)PGAS(0.968)PGS(0.014)EAR LIPNAT(-96.69)GT(-72.87)GT(-54.71)FS(-17.48)PGAS(17.48)PGS(-18.3)EAR 16 3 1.2114 6335 0 0 6706.8 0 0 6313.4 0 0 6071.3 0 0 6279.6 0 0 5826.7 0 0 6344.6 0 0 5821.9 0 0 5666.7 0 0 13922 0 0 5994.4 0 0 6332 0 0 6358.2 0 0 6268.7 0 0 6374.8 0 0 5877.4 0 0 6436.6 0 0 6259.5 0 0 5620 0 0 13244 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15316000 15316000 0 0 NaN 1919 1102 537 537 2410 2547 2740 3060 2740 3060 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18100 2740 3060 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18100 2740 3060 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18100 Q16512 561 Q16512 Q16512 Serine/threonine-protein kinase N1 PKN1 sp|Q16512|PKN1_HUMAN Serine/threonine-protein kinase N1 OS=Homo sapiens GN=PKN1 PE=1 SV=2 0.499834 0 1.14094E-15 218.2 184 218.2 S GDISVEKLNLGTDSDSSPQKSSRDPPSSPSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPXXXXXXXXXXX LNLGTDSDS(0.5)S(0.5)PQK LNLGT(-78.17)DS(-31.79)DS(0)S(0)PQK 9 2 0.6208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1920 1102 561 561 2477 2616 2810 3137 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14790 2810 3137 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14790 2810 3137 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14790 Q16512 562 Q16512 Q16512 Serine/threonine-protein kinase N1 PKN1 sp|Q16512|PKN1_HUMAN Serine/threonine-protein kinase N1 OS=Homo sapiens GN=PKN1 PE=1 SV=2 0.499834 0 1.14094E-15 218.2 184 218.2 S DISVEKLNLGTDSDSSPQKSSRDPPSSPSSL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LNLGTDSDS(0.5)S(0.5)PQK LNLGT(-78.17)DS(-31.79)DS(0)S(0)PQK 10 2 0.6208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1921 1102 562 562 2477 2616 2810 3137 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14790 2810 3137 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14790 2810 3137 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14790 Q16512 380 Q16512 Q16512 Serine/threonine-protein kinase N1 PKN1 sp|Q16512|PKN1_HUMAN Serine/threonine-protein kinase N1 OS=Homo sapiens GN=PKN1 PE=1 SV=2 0.852756 7.62786 1.74619E-41 334.49 292.36 334.49 1 S ARGLYSRSGSLSGRSSLKAEAENTSEVSTVL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP S(0.147)S(0.853)LKAEAENTSEVSTVLK S(-7.63)S(7.63)LKAEAENT(-119.07)S(-145.4)EVS(-198.83)T(-218.71)VLK 2 3 0.37071 13433 0 0 18513 0 0 16514 0 0 20424 0 0 27335 0 0 15935 0 0 27854 0 0 21970 0 0 23691 0 0 13800 0 0 12723 0 0 17500 0 0 16585 0 0 20782 0 0 27105 0 0 16274 0 0 28214 0 0 22220 0 0 23553 0 0 13503 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29876000 29876000 0 0 NaN 1922 1102 380 380 4366 4650 4954 5499 4954 5499 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18085 4954 5499 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18085 4954 5499 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18085 Q16512 916 Q16512 Q16512 Serine/threonine-protein kinase N1 PKN1 sp|Q16512|PKN1_HUMAN Serine/threonine-protein kinase N1 OS=Homo sapiens GN=PKN1 PE=1 SV=2 0.998551 28.3824 3.46615E-23 259.29 235.57 249.88 1 S VSNFDEEFTGEAPTLSPPRDARPLTAAEQAA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPXXXXXXXXX TDVSNFDEEFTGEAPT(0.001)LS(0.999)PPRDAR T(-233.29)DVS(-224.08)NFDEEFT(-120.37)GEAPT(-28.38)LS(28.38)PPRDAR 18 3 -0.23838 18232 0 0 18168 0 0 17589 0 0 22675 0 0 24276 0 0 25300 0 0 17033 0 0 26535 0 0 28336 0 0 191940 0 0 17250 0 0 17188 0 0 17816 0 0 23049 0 0 24149 0 0 25619 0 0 17996 0 0 32353 0 0 27480 0 0 181350 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 423610000 423610000 0 0 NaN 1923 1102 916 916 4673;4674 4984;4985 5308;5309;5310 5899;5900;5901;5902 5310 5902 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18712 5308 5900 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20460 5308 5900 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20460 Q16513 583 Q16513 Q16513 Serine/threonine-protein kinase N2 PKN2 sp|Q16513|PKN2_HUMAN Serine/threonine-protein kinase N2 OS=Homo sapiens GN=PKN2 PE=1 SV=1 0.995805 23.7543 3.01238E-31 296.49 248.05 296.49 1 S FDLEPEPPPAPPRASSLGEIDESSELRVLDI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX AS(0.004)S(0.996)LGEIDESSELR AS(-23.75)S(23.75)LGEIDES(-109.02)S(-140.47)ELR 3 2 -0.34033 12433 0 0 12012 0 0 12408 0 0 13011 0 0 13324 0 0 14259 0 0 10822 0 0 12298 0 0 11493 0 0 13467 0 0 11765 0 0 11353 0 0 12502 0 0 13318 0 0 13432 0 0 14238 0 0 11154 0 0 12817 0 0 11312 0 0 12965 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10426000 10426000 0 0 NaN 1924 1103 583 583 500 531 571 637 571 637 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15404 571 637 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15404 571 637 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15404 Q16514 51 Q16514 Q16514 Transcription initiation factor TFIID subunit 12 TAF12 sp|Q16514|TAF12_HUMAN Transcription initiation factor TFIID subunit 12 OS=Homo sapiens GN=TAF12 PE=1 SV=1 1 124.754 8.8005E-08 148.3 120.74 144.8 1 S AVVKIPGTPGAGGRLSPENNQVLTKKKLQDL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPPPXXXXXX LS(1)PENNQVLTK LS(124.75)PENNQVLT(-124.75)K 2 3 0.014501 21193 0 0 28364 0 0 22318 0 0 27396 0 0 26918 0 0 21649 0 0 26849 0 0 27203 0 0 32839 0 0 55274 0 0 20058 0 0 26789 0 0 22464 0 0 28096 0 0 27050 0 0 22130 0 0 27497 0 0 28737 0 0 32148 0 0 52677 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 134530000 134530000 0 0 NaN 1925 1104 51 51 1908;2569 2015;2713 2176;2911 2436;3245 2911 3245 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15640 2176 2436 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16448 2176 2436 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16448 Q16539 2 Q16539 Q16539 Mitogen-activated protein kinase 14 MAPK14 sp|Q16539|MK14_HUMAN Mitogen-activated protein kinase 14 OS=Homo sapiens GN=MAPK14 PE=1 SV=3 0.999967 45.2983 0.0041372 60.074 32.959 60.074 1 S ______________MSQERPTFYRQELNKTI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(1)QERPTFYR S(45.3)QERPT(-45.3)FY(-54.91)R 1 2 0.2357 18238 0 0 22135 0 0 20814 0 0 22011 0 0 20903 0 0 22774 0 0 18039 0 0 22461 0 0 23760 0 0 10147 0 0 17268 0 0 20909 0 0 20806 0 0 22620 0 0 21172 0 0 22809 0 0 18656 0 0 22848 0 0 23201 0 0 10074 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 34906000 34906000 0 0 NaN 1926 1105 2 2 4228 4506 4802 5329 4802 5329 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10443 4802 5329 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10443 4802 5329 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10443 Q16543 377 Q16543 Q16543 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed CDC37 sp|Q16543|CDC37_HUMAN Hsp90 co-chaperone Cdc37 OS=Homo sapiens GN=CDC37 PE=1 SV=1 0.999845 38.0983 0.0195723 62.89 15.629 62.89 1 S PLLEAVPKTGDEKDVSV______________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPXXXXXXXXXXXXXX TGDEKDVS(1)V T(-38.1)GDEKDVS(38.1)V 8 2 -1.1824 35340 0 0 48862 0 0 36297 0 0 49618 0 0 27167 0 0 35324 0 0 31148 0 0 37609 0 0 51286 0 0 12642 0 0 33444 0 0 46163 0 0 36390 0 0 50671 0 0 28184 0 0 36097 0 0 32066 0 0 38017 0 0 49750 0 0 12774 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 35223000 35223000 0 0 NaN 1927 1106 377 377 4717 5028 5355 5950 5355 5950 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11202 5355 5950 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11202 5355 5950 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11202 Q16576 3 Q16576 Q16576 Histone-binding protein RBBP7 RBBP7 sp|Q16576|RBBP7_HUMAN Histone-binding protein RBBP7 OS=Homo sapiens GN=RBBP7 PE=1 SV=1 0.999998 57.7223 2.73542E-07 88.596 43.905 88.596 1 S _____________MASKEMFEDTVEERVINE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPXXXX AS(1)KEMFEDTVEER AS(57.72)KEMFEDT(-57.72)VEER 2 2 0.047244 8291.3 0 0 10778 0 0 8255.9 0 0 9872 0 0 28328 0 0 7994.4 0 0 27432 0 0 15598 0 0 9008.5 0 0 37799 0 0 7845.5 0 0 10176 0 0 8559.3 0 0 10161 0 0 27532 0 0 8263.5 0 0 27462 0 0 16490 0 0 9670.1 0 0 35953 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20579000 20579000 0 0 NaN 1928 1108 3 3 467 497 534 598 534 598 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16829 534 598 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16829 534 598 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16829 Q16629 181 Q16629 Q16629 Serine/arginine-rich splicing factor 7 SRSF7 sp|Q16629|SRSF7_HUMAN Serine/arginine-rich splicing factor 7 OS=Homo sapiens GN=SRSF7 PE=1 SV=1 0.999999 61.4052 0.00200423 99.985 80.429 99.985 2 S ISLRRSRSASLRRSRSGSIKGSRYFQSPSRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY) XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX S(1)GS(0.999)IKGS(0.001)R S(61.41)GS(31.15)IKGS(-31.15)R 1 2 -0.4577 0 108580 0 0 85669 0 0 105890 0 0 85887 0 0 102260 0 0 99482 0 0 104310 0 0 98192 0 0 89168 0 0 8924.3 0 0 102730 0 0 80930 0 0 106740 0 0 88391 0 0 104010 0 0 99110 0 0 105670 0 0 98813 0 0 88624 0 0 10676 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 100550000 0 100550000 0 NaN 1929 1109 181 181 3808 4057 4329 4810;4811 4329 4810 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6931 4329 4810 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6931 4329 4810 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6931 Q16629 183 Q16629 Q16629 Serine/arginine-rich splicing factor 7 SRSF7 sp|Q16629|SRSF7_HUMAN Serine/arginine-rich splicing factor 7 OS=Homo sapiens GN=SRSF7 PE=1 SV=1 0.999234 31.155 0.00200423 99.985 80.429 99.985 2 S LRRSRSASLRRSRSGSIKGSRYFQSPSRSRS X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX S(1)GS(0.999)IKGS(0.001)R S(61.41)GS(31.15)IKGS(-31.15)R 3 2 -0.4577 0 108580 0 0 85669 0 0 105890 0 0 85887 0 0 102260 0 0 99482 0 0 104310 0 0 98192 0 0 89168 0 0 8924.3 0 0 102730 0 0 80930 0 0 106740 0 0 88391 0 0 104010 0 0 99110 0 0 105670 0 0 98813 0 0 88624 0 0 10676 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 100550000 0 100550000 0 NaN 1930 1109 183 183 3808 4057 4329 4810;4811 4329 4810 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6931 4329 4810 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6931 4329 4810 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6931 Q16629 192 Q16629 Q16629 Serine/arginine-rich splicing factor 7 SRSF7 sp|Q16629|SRSF7_HUMAN Serine/arginine-rich splicing factor 7 OS=Homo sapiens GN=SRSF7 PE=1 SV=1 0.968444 14.7483 0.0015389 114.86 76.683 57.212 1;2 S RRSRSGSIKGSRYFQSPSRSRSRSRSISRPR X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX Y(0.001)FQS(0.968)PS(0.085)RS(0.946)R Y(-30.75)FQS(14.75)PS(-12.29)RS(12.29)R 4 2 1.1164 133070 24837 0 87025 18048 0 135870 23288 0 80110 16885 0 55143 18900 0 145540 24659 0 47419 21033 0 92079 20758 0 87458 18265 0 1432.3 6603.4 0 125930 23496 0 82170 17042 0 135650 23489 0 83728 17533 0 60654 19466 0 142290 24334 0 49736 21232 0 94477 21172 0 84597 18140 0 3479.7 6698.3 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 232910000 195600000 37309000 0 NaN 1931 1109 192 192 5376;5377 5727;5728 6110;6111 6795;6796 6111 6796 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10171 6110 6795 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11016 6110 6795 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11016 Q16629 196 Q16629 Q16629 Serine/arginine-rich splicing factor 7 SRSF7 sp|Q16629|SRSF7_HUMAN Serine/arginine-rich splicing factor 7 OS=Homo sapiens GN=SRSF7 PE=1 SV=1 0.945875 12.2901 0.0290083 57.212 33.395 57.212 2 S SGSIKGSRYFQSPSRSRSRSRSISRPRSSRS Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPXXXXXXXXXXXXXX Y(0.001)FQS(0.968)PS(0.085)RS(0.946)R Y(-30.75)FQS(14.75)PS(-12.29)RS(12.29)R 8 2 1.1164 0 24837 0 0 18048 0 0 23288 0 0 16885 0 0 18900 0 0 24659 0 0 21033 0 0 20758 0 0 18265 0 0 6603.4 0 0 23496 0 0 17042 0 0 23489 0 0 17533 0 0 19466 0 0 24334 0 0 21232 0 0 21172 0 0 18140 0 0 6698.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 37309000 0 37309000 0 NaN 1932 1109 196 196 5377 5728 6111 6796 6111 6796 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10171 6111 6796 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10171 6111 6796 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10171 Q16643 601 Q16643 Q16643 Drebrin DBN1 sp|Q16643|DREB_HUMAN Drebrin OS=Homo sapiens GN=DBN1 PE=1 SV=4 0.99502 23.0061 1.11918E-17 220.14 201.84 220.14 1 S TQKEGTQASEGYFSQSQEEEFAQSEELCAKA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPPPPPPPX EGTQASEGYFS(0.005)QS(0.995)QEEEFAQSEELCAK EGT(-82.43)QAS(-62.71)EGY(-105.24)FS(-23.01)QS(23.01)QEEEFAQS(-134.67)EELCAK 13 3 0.17519 4987.9 0 0 4169.5 0 0 5040.6 0 0 4800.3 0 0 14063 0 0 2974.9 0 0 16680 0 0 14503 0 0 4562.1 0 0 186500 0 0 4720 0 0 3942.4 0 0 5187.9 0 0 4860.9 0 0 13764 0 0 3559.1 0 0 16521 0 0 19720 0 0 5015.4 0 0 175950 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 46896000 46896000 0 0 NaN 1933 1110 601 601 985 1040 1126 1241;1242;1243 1126 1241 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19456 1126 1241 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19456 1126 1241 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19456 Q16643 142 Q16643 Q16643 Drebrin DBN1 sp|Q16643|DREB_HUMAN Drebrin OS=Homo sapiens GN=DBN1 PE=1 SV=4 0.997282 25.6457 1.24872E-07 175.91 104.22 175.91 1 S GAIGQRLSNGLARLSSPVLHRLRLREDENAE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX LS(0.003)S(0.997)PVLHR LS(-25.65)S(25.65)PVLHR 3 2 -0.46113 26081 0 0 23030 0 0 22682 0 0 22725 0 0 26597 0 0 23945 0 0 32736 0 0 28985 0 0 20960 0 0 4154.5 0 0 24667 0 0 21754 0 0 23094 0 0 23372 0 0 26835 0 0 24018 0 0 32706 0 0 29004 0 0 21180 0 0 4582.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1141200000 1141200000 0 0 NaN 1934 1110 142 142 2597 2743 2942 3276 2942 3276 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11241 2942 3276 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11241 2942 3276 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11241 Q16643 337 Q16643 Q16643 Drebrin DBN1 sp|Q16643|DREB_HUMAN Drebrin OS=Homo sapiens GN=DBN1 PE=1 SV=4 0.90937 10.5581 1.97676E-43 346.77 313.51 346.77 1 S LDSHRRMAPTPIPTRSPSDSSTASTPVAEQI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPPPPPP MAPTPIPT(0.01)RS(0.909)PS(0.08)DS(0.001)STASTPVAEQIER MAPT(-56.67)PIPT(-19.61)RS(10.56)PS(-10.56)DS(-31.15)S(-55.19)T(-59.95)AS(-106.84)T(-129.6)PVAEQIER 10 3 0.4163 6274.9 0 0 7738.4 0 0 5903.7 0 0 7253.7 0 0 8720 0 0 6635.3 0 0 9655.2 0 0 7935.9 0 0 7854.3 0 0 10610 0 0 5936.2 0 0 7307.4 0 0 6002.2 0 0 7467.5 0 0 8694.3 0 0 6714.8 0 0 9734 0 0 8229.6 0 0 7826.2 0 0 10174 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 69664000 69664000 0 0 NaN 1935 1110 337 337 2667 2817;2818 3023 3368 3023 3368 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15605 3023 3368 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15605 3023 3368 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15605 Q16649 301 Q16649 Q16649 Nuclear factor interleukin-3-regulated protein NFIL3 sp|Q16649|NFIL3_HUMAN Nuclear factor interleukin-3-regulated protein OS=Homo sapiens GN=NFIL3 PE=1 SV=2 1 129.368 6.89522E-05 129.37 68.85 129.37 1 S SDGEDEQQVPKGPIHSPVELKHVHATVVKVP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX GPIHS(1)PVELK GPIHS(129.37)PVELK 5 3 -0.99387 12437 0 0 14133 0 0 12841 0 0 14481 0 0 5749.8 0 0 12278 0 0 6511.6 0 0 9630.4 0 0 14631 0 0 2090.8 0 0 11770 0 0 13353 0 0 12822 0 0 14812 0 0 6272 0 0 12376 0 0 6814 0 0 9825.6 0 0 14092 0 0 2191.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27825000 27825000 0 0 NaN 1936 1111 301 301 1546 1628 1757 1950 1757 1950 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13966 1757 1950 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13966 1757 1950 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13966 Q16649 353 Q16649 Q16649 Nuclear factor interleukin-3-regulated protein NFIL3 sp|Q16649|NFIL3_HUMAN Nuclear factor interleukin-3-regulated protein OS=Homo sapiens GN=NFIL3 PE=1 SV=2 0.992814 21.4041 6.07218E-07 170.4 74.629 170.4 1 S VEAFDNEFEATQKLSSPIDMTSKRHFELEKH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX LS(0.007)S(0.993)PIDMTSK LS(-21.4)S(21.4)PIDMT(-71.06)S(-84.44)K 3 2 -0.081051 24191 0 0 28253 0 0 24355 0 0 29907 0 0 11551 0 0 23494 0 0 12846 0 0 19862 0 0 29643 0 0 17349 0 0 22892 0 0 26699 0 0 24360 0 0 30504 0 0 12513 0 0 23823 0 0 13474 0 0 20586 0 0 28537 0 0 16796 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13045000 13045000 0 0 NaN 1937 1111 353 353 2594 2740 2939 3273 2939 3273 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17008 2939 3273 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17008 2939 3273 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17008 Q16666 153 Q16666 Q16666 Gamma-interferon-inducible protein 16 IFI16 sp|Q16666|IF16_HUMAN Gamma-interferon-inducible protein 16 OS=Homo sapiens GN=IFI16 PE=1 SV=3 0.998652 30.4057 0.0016139 97.295 83.687 97.295 1 S GPKGSKVSEEQTQPPSPAGAGMSTAMGRSPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Oxidation (M);X;X;X;Oxidation (M);X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPPPXXX VSEEQT(0.001)QPPS(0.999)PAGAGMSTAMGR VS(-52.45)EEQT(-30.41)QPPS(30.41)PAGAGMS(-37.16)T(-36.19)AMGR 10 3 0.20865 33252 0 0 25134 0 0 33958 0 0 27434 0 0 58658 0 0 35907 0 0 64614 0 0 42881 0 0 28435 0 0 48025 0 0 31468 0 0 23756 0 0 34467 0 0 28164 0 0 58118 0 0 35791 0 0 64495 0 0 44189 0 0 29591 0 0 46214 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 150050000 150050000 0 0 NaN 1938 1113 153 153 5243 5588;5589 5956;5957;5958 6620;6621;6622 5958 6622 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13482 5958 6622 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13482 5958 6622 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13482 Q16799 352 Q16799 Q16799 Reticulon-1 RTN1 sp|Q16799|RTN1_HUMAN Reticulon-1 OS=Homo sapiens GN=RTN1 PE=1 SV=1 0.973438 15.6404 6.74729E-11 195.94 161.03 195.94 1 S GTEPSAAESQGKGSISEDELITAIKEAKGLS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX GS(0.027)IS(0.973)EDELITAIK GS(-15.64)IS(15.64)EDELIT(-122.18)AIK 4 3 0.14123 2151.5 0 0 2254.2 0 0 1944.4 0 0 2516.3 0 0 17301 0 0 1624.5 0 0 18519 0 0 8087.1 0 0 2397.2 0 0 6272 0 0 2035.1 0 0 2130.9 0 0 2160.1 0 0 2553.3 0 0 16652 0 0 1760.9 0 0 18351 0 0 8050.5 0 0 3049.1 0 0 6093 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13307000 13307000 0 0 NaN 1939 1114 352 352 1615 1701 1838 2045 1838 2045 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22139 1838 2045 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22139 1838 2045 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22139 Q16828;Q99956;Q16829 331;328;369 Q16828 Q16828 Dual specificity protein phosphatase 6;Dual specificity protein phosphatase 9;Dual specificity protein phosphatase 7 DUSP6;DUSP9;DUSP7 sp|Q16828|DUS6_HUMAN Dual specificity protein phosphatase 6 OS=Homo sapiens GN=DUSP6 PE=1 SV=2;sp|Q99956|DUS9_HUMAN Dual specificity protein phosphatase 9 OS=Homo sapiens GN=DUSP9 PE=1 SV=1;sp|Q16829|DUS7_HUMAN Dual specificity protein phosphatase 7 OS=Hom 0.937412 11.7544 0.00298187 93.404 67.909 93.404 1 S MNDAYDIVKMKKSNISPNFNFMGQLLDFERT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPX S(0.063)NIS(0.937)PNFNFMGQLLDFER S(-11.75)NIS(11.75)PNFNFMGQLLDFER 4 3 -1.5843 2696.9 0 0 10152 0 0 2913.1 0 0 9755.7 0 0 3362.1 0 0 2804.3 0 0 2915 0 0 5242.3 0 0 10808 0 0 17408 0 0 2552.7 0 0 9587.8 0 0 2925.6 0 0 9929.3 0 0 3386.5 0 0 3184.5 0 0 3204.8 0 0 5688.5 0 0 10330 0 0 16513 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 57691000 57691000 0 0 NaN 1940 1115 331 331 4043 4312 4601 5110 4601 5110 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24222 4601 5110 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24222 4601 5110 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24222 Q16875 461 Q16875 Q16875 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase PFKFB3 sp|Q16875|F263_HUMAN 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 OS=Homo sapiens GN=PFKFB3 PE=1 SV=1 0.978304 16.5409 4.50442E-05 131.09 92.724 131.09 1 S SEDAKKGPNPLMRRNSVTPLASPEPTKKPRI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX RNS(0.978)VT(0.022)PLASPEPTK RNS(16.54)VT(-16.54)PLAS(-67.9)PEPT(-103.11)K 3 3 -0.46956 32084 0 0 29423 0 0 35573 0 0 26278 0 0 31190 0 0 32650 0 0 30811 0 0 31356 0 0 29137 0 0 6775.2 0 0 30373 0 0 27777 0 0 35565 0 0 27276 0 0 31904 0 0 32439 0 0 31336 0 0 31706 0 0 28820 0 0 7105.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 58095000 58095000 0 0 NaN 1941 1116 461 461 3371 3578 3818 4240 3818 4240 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11842 3818 4240 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11842 3818 4240 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11842 Q16890 149 Q16890 Q16890 Tumor protein D53 TPD52L1 sp|Q16890|TPD53_HUMAN Tumor protein D53 OS=Homo sapiens GN=TPD52L1 PE=1 SV=1 0.982132 18.2976 0.000125779 111.78 60.641 111.78 1 S HSISMPAMRNSPTFKSFEERVETTVTSLKTK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX NS(0.003)PT(0.015)FKS(0.982)FEER NS(-24.69)PT(-18.3)FKS(18.3)FEER 7 3 -0.1083 7102.6 0 0 104910 0 0 7016.7 0 0 95662 0 0 6493 0 0 5809.1 0 0 6254.9 0 0 41591 0 0 96460 0 0 4411.4 0 0 6720.5 0 0 99056 0 0 7063.5 0 0 97344 0 0 6701.9 0 0 10290 0 0 8848.6 0 0 40465 0 0 91351 0 0 5116.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 91384000 91384000 0 0 NaN 1942 1117 149 149 2931 3107 3327 3688 3327 3688 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14254 3327 3688 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14254 3327 3688 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14254 Q1KMD3 161 Q1KMD3 Q1KMD3 Heterogeneous nuclear ribonucleoprotein U-like protein 2 HNRNPUL2 sp|Q1KMD3|HNRL2_HUMAN Heterogeneous nuclear ribonucleoprotein U-like protein 2 OS=Homo sapiens GN=HNRNPUL2 PE=1 SV=1 0.682638 3.32763 0.0017033 97.095 81.205 97.095 1 S EQGLGKREEDEPEERSGDETPGSEVPGDKAA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPXX S(0.683)GDET(0.317)PGSEVPGDK S(3.33)GDET(-3.33)PGS(-38.63)EVPGDK 1 3 0.49604 22460 0 0 19504 0 0 21394 0 0 19709 0 0 20065 0 0 22551 0 0 22660 0 0 20240 0 0 21144 0 0 5872.4 0 0 21248 0 0 18426 0 0 21593 0 0 20269 0 0 20475 0 0 22459 0 0 22900 0 0 20569 0 0 20927 0 0 5998 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 40861000 40861000 0 0 NaN 1943 1118 161 161 3778 4022 4290 4769 4290 4769 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10594 4290 4769 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10594 4290 4769 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10594 Q1KMD3 193 Q1KMD3 Q1KMD3 Heterogeneous nuclear ribonucleoprotein U-like protein 2 HNRNPUL2 sp|Q1KMD3|HNRL2_HUMAN Heterogeneous nuclear ribonucleoprotein U-like protein 2 OS=Homo sapiens GN=HNRNPUL2 PE=1 SV=1 0.999986 48.4415 0.000175887 115.56 78.787 115.56 1 S EQGDDQDSEKSKPAGSDGERRGVKRQRDEKD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX SKPAGS(1)DGERR S(-48.44)KPAGS(48.44)DGERR 6 3 0.18986 15392 0 0 20515 0 0 15079 0 0 19544 0 0 24268 0 0 14996 0 0 23630 0 0 19842 0 0 20531 0 0 5414.5 0 0 14564 0 0 19374 0 0 15313 0 0 20053 0 0 24073 0 0 15305 0 0 23999 0 0 19878 0 0 20389 0 0 5557.6 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 54200000 54200000 0 0 NaN 1944 1118 193 193 3889;3890 4143;4144 4422;4423 4916;4917 4423 4917 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5255 4423 4917 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5255 4423 4917 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5255 Q29RF7 1305 Q29RF7 Q29RF7 Sister chromatid cohesion protein PDS5 homolog A PDS5A sp|Q29RF7|PDS5A_HUMAN Sister chromatid cohesion protein PDS5 homolog A OS=Homo sapiens GN=PDS5A PE=1 SV=1 1 138.767 4.2185E-07 138.77 117.37 138.77 1 S KPINKGRKRAAVGQESPGGLEAGNAKAPKLQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPXXXXX AAVGQES(1)PGGLEAGNAK AAVGQES(138.77)PGGLEAGNAK 7 3 -0.22598 123900 0 0 31806 0 0 144140 0 0 33755 0 0 69831 0 0 127860 0 0 55727 0 0 89920 0 0 41266 0 0 13718 0 0 117310 0 0 30057 0 0 143040 0 0 36052 0 0 75039 0 0 123510 0 0 57007 0 0 92080 0 0 41331 0 0 14998 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 105560000 105560000 0 0 NaN 1945 1119 1305 1305 85 90 98 111 98 111 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12357 98 111 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12357 98 111 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12357 Q2KHR2 1081 Q2KHR2 Q2KHR2 DNA-binding protein RFX7 RFX7 sp|Q2KHR2|RFX7_HUMAN DNA-binding protein RFX7 OS=Homo sapiens GN=RFX7 PE=1 SV=1 0.619572 2.31328 4.84207E-16 240.45 212.09 240.45 1 S RCRSVSPAVHRQRNLSGSTLYPVSNIPRSNV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX NLS(0.62)GS(0.364)T(0.017)LYPVSNIPR NLS(2.31)GS(-2.31)T(-15.69)LY(-91.43)PVS(-71.24)NIPR 3 2 -1.0766 11023 0 0 9207.1 0 0 12276 0 0 8450.5 0 0 11345 0 0 11724 0 0 12504 0 0 12464 0 0 9590.2 0 0 29167 0 0 10435 0 0 8693.3 0 0 12280 0 0 8775.5 0 0 11581 0 0 11670 0 0 12592 0 0 13352 0 0 9586.2 0 0 27753 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15670000 15670000 0 0 NaN 1946 1120 1081 1081 2863 3034 3249 3605 3249 3605 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18841 3249 3605 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18841 3249 3605 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18841 Q2KHR2 358 Q2KHR2 Q2KHR2 DNA-binding protein RFX7 RFX7 sp|Q2KHR2|RFX7_HUMAN DNA-binding protein RFX7 OS=Homo sapiens GN=RFX7 PE=1 SV=1 0.954154 13.1872 8.1524E-05 120.92 99.291 120.92 1 S SALTIRSPTTVLFTSSPIKTAVVPASHMSSL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX SPTTVLFTS(0.046)S(0.954)PIK S(-94.43)PT(-94.43)T(-94.43)VLFT(-43.5)S(-13.19)S(13.19)PIK 10 3 -0.12344 5165.7 0 0 3373.6 0 0 5649.7 0 0 4141.6 0 0 2979.8 0 0 4765.8 0 0 3365.7 0 0 5085.2 0 0 3488.2 0 0 6487.6 0 0 4889.9 0 0 3191.3 0 0 5629.1 0 0 4215.6 0 0 3187.2 0 0 4765.3 0 0 3410.8 0 0 5283.9 0 0 3436.6 0 0 6226.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6466000 6466000 0 0 NaN 1947 1120 358 358 4206 4483 4777 5303 4777 5303 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20497 4777 5303 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20497 4777 5303 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20497 Q2KHR2 1126 Q2KHR2 Q2KHR2 DNA-binding protein RFX7 RFX7 sp|Q2KHR2|RFX7_HUMAN DNA-binding protein RFX7 OS=Homo sapiens GN=RFX7 PE=1 SV=1 0.498131 0 3.75041E-05 118.57 100.87 118.57 S TNVHTDACANNIAQRSQSVPLTVMMQTAFPN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.498)QS(0.498)VPLT(0.004)VMMQTAFPNALQK S(0)QS(0)VPLT(-21.25)VMMQT(-78.22)AFPNALQK 1 3 0.18889 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1948 1120 1126 1126 4252 4531 4830 5361 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23870 4830 5361 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23870 4830 5361 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23870 Q2KHR2 1128 Q2KHR2 Q2KHR2 DNA-binding protein RFX7 RFX7 sp|Q2KHR2|RFX7_HUMAN DNA-binding protein RFX7 OS=Homo sapiens GN=RFX7 PE=1 SV=1 0.498131 0 3.75041E-05 118.57 100.87 118.57 S VHTDACANNIAQRSQSVPLTVMMQTAFPNAL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.498)QS(0.498)VPLT(0.004)VMMQTAFPNALQK S(0)QS(0)VPLT(-21.25)VMMQT(-78.22)AFPNALQK 3 3 0.18889 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1949 1120 1128 1128 4252 4531 4830 5361 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23870 4830 5361 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23870 4830 5361 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23870 Q2KHR2 202 Q2KHR2 Q2KHR2 DNA-binding protein RFX7 RFX7 sp|Q2KHR2|RFX7_HUMAN DNA-binding protein RFX7 OS=Homo sapiens GN=RFX7 PE=1 SV=1 0.981152 17.1646 0.000499532 111.63 64.786 111.63 1 S TAESNSFQPQVKTLPSPIDAKQQLQRKIQKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX T(0.019)LPS(0.981)PIDAK T(-17.16)LPS(17.16)PIDAK 4 2 0.15543 15060 0 0 10795 0 0 14132 0 0 10071 0 0 10566 0 0 15751 0 0 11345 0 0 12458 0 0 11033 0 0 9911.5 0 0 14247 0 0 10194 0 0 14241 0 0 10476 0 0 10944 0 0 15512 0 0 11503 0 0 12922 0 0 10899 0 0 9621.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7864900 7864900 0 0 NaN 1950 1120 202 202 4784 5102 5436 6047 5436 6047 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16053 5436 6047 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16053 5436 6047 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16053 Q2KHR3 613 Q2KHR3 Q2KHR3 Glutamine and serine-rich protein 1 QSER1 sp|Q2KHR3|QSER1_HUMAN Glutamine and serine-rich protein 1 OS=Homo sapiens GN=QSER1 PE=1 SV=3 0.622098 2.16479 5.89734E-11 188.29 164.49 188.29 1 S KVSKADDRYSQSVIRSNSRLEDQVIGVALQA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.622)NS(0.378)RLEDQVIGVALQASK S(2.16)NS(-2.16)RLEDQVIGVALQAS(-150.82)K 1 3 0.12262 3684.3 0 0 7523.9 0 0 3615.8 0 0 6922.2 0 0 5537.9 0 0 3886.3 0 0 5176.5 0 0 6078 0 0 8009.5 0 0 30675 0 0 3486 0 0 7104.2 0 0 3667.7 0 0 7095.4 0 0 5504 0 0 4116.1 0 0 5364.1 0 0 6936.1 0 0 7782.9 0 0 29025 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17169000 17169000 0 0 NaN 1951 1121 613 613 4064 4334 4624 5137 4624 5137 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21980 4624 5137 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21980 4624 5137 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21980 Q2M2I8 637 Q2M2I8 Q2M2I8 AP2-associated protein kinase 1 AAK1 sp|Q2M2I8|AAK1_HUMAN AP2-associated protein kinase 1 OS=Homo sapiens GN=AAK1 PE=1 SV=3 0.997535 26.1455 9.12389E-08 167.97 132.64 167.97 1 S PSSPKTQRAGHRRILSDVTHSAVFGVPASKS X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY) XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX ILS(0.998)DVT(0.002)HSAVFGVPASK ILS(26.15)DVT(-26.15)HS(-43.77)AVFGVPAS(-147.58)K 3 3 0.11884 64022 0 0 69049 0 0 72248 0 0 72531 0 0 22080 0 0 67709 0 0 29453 0 0 62107 0 0 83198 0 0 165100 0 0 60612 0 0 65248 0 0 71676 0 0 74182 0 0 25524 0 0 68324 0 0 31098 0 0 67490 0 0 79812 0 0 156900 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 143650000 143650000 0 0 NaN 1952 1122 637 637 1888 1992 2150 2409 2150 2409 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23235 2150 2409 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23235 2150 2409 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23235 Q2M2I8 652 Q2M2I8 Q2M2I8 AP2-associated protein kinase 1 AAK1 sp|Q2M2I8|AAK1_HUMAN AP2-associated protein kinase 1 OS=Homo sapiens GN=AAK1 PE=1 SV=3 0.5 0 2.60456E-07 160.05 134.33 160.05 1 S SDVTHSAVFGVPASKSTQLLQAAAAEASLNK Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.5)T(0.5)QLLQAAAAEASLNK S(0)T(0)QLLQAAAAEAS(-142.13)LNK 1 3 -1.0255 25004 0 0 9539.1 0 0 29450 0 0 9876 0 0 7209.2 0 0 26368 0 0 7158.7 0 0 17152 0 0 10669 0 0 17800 0 0 23677 0 0 9013.2 0 0 29126 0 0 10385 0 0 8631.7 0 0 25612 0 0 7385.5 0 0 18098 0 0 10379 0 0 17158 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 49211000 49211000 0 0 NaN 1953 1122 652 652 4515 4809 5122 5688 5122 5688 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21218 5122 5688 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21218 5122 5688 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21218 Q2M2I8 623 Q2M2I8 Q2M2I8 AP2-associated protein kinase 1 AAK1 sp|Q2M2I8|AAK1_HUMAN AP2-associated protein kinase 1 OS=Homo sapiens GN=AAK1 PE=1 SV=3 0.513761 0.239342 4.39914E-05 135.5 107.1 135.5 2 S PPAVQGQKVGSLTPPSSPKTQRAGHRRILSD X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX VGS(0.006)LT(0.994)PPS(0.514)S(0.486)PK VGS(-22.55)LT(22.55)PPS(0.24)S(-0.24)PK 8 2 0.033734 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1954 1122 623 623 5122 5459 5815 6466 5815 6466 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14561 5815 6466 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14561 5815 6466 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14561 Q2TB10 647 Q2TB10 Q2TB10 Zinc finger protein 800 ZNF800 sp|Q2TB10|ZN800_HUMAN Zinc finger protein 800 OS=Homo sapiens GN=ZNF800 PE=1 SV=1 0.999254 31.4008 1.9098E-07 170.98 133.42 121.27 1 S YLEHHKKTHKANASNSPEGNKTKGRSTRSKA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPXXXXXXXX ANAS(0.001)NS(0.999)PEGNKTK ANAS(-31.4)NS(31.4)PEGNKT(-46.49)K 6 3 -0.071715 36684 0 0 31463 0 0 38037 0 0 30754 0 0 17395 0 0 37632 0 0 16336 0 0 28938 0 0 33634 0 0 6808.6 0 0 34718 0 0 29718 0 0 37968 0 0 31731 0 0 18872 0 0 37318 0 0 17153 0 0 29569 0 0 32453 0 0 7080.8 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 26813000 26813000 0 0 NaN 1955 1123 647 647 340;341 366;367 395;396 436;437 396 437 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7086 395 436 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6467 395 436 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6467 Q2TB10 462 Q2TB10 Q2TB10 Zinc finger protein 800 ZNF800 sp|Q2TB10|ZN800_HUMAN Zinc finger protein 800 OS=Homo sapiens GN=ZNF800 PE=1 SV=1 0.763646 6.328 6.57914E-07 139.48 110.15 139.48 1 S QKNKVKQDSESPKSTSPSAAGGQQKTRKPKL X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX S(0.057)T(0.178)S(0.764)PS(0.001)AAGGQQK S(-11.26)T(-6.33)S(6.33)PS(-27.39)AAGGQQK 3 2 -1.2162 15350 0 0 14443 0 0 15947 0 0 15617 0 0 8113.6 0 0 14832 0 0 8960 0 0 12446 0 0 16207 0 0 2884.2 0 0 14527 0 0 13650 0 0 15929 0 0 15951 0 0 8715 0 0 14877 0 0 9278.3 0 0 12663 0 0 15684 0 0 3003.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8213000 8213000 0 0 NaN 1956 1123 462 462 4526 4825 5140 5708 5140 5708 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6678 5140 5708 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6678 5140 5708 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6678 Q2TB10 457 Q2TB10 Q2TB10 Zinc finger protein 800 ZNF800 sp|Q2TB10|ZN800_HUMAN Zinc finger protein 800 OS=Homo sapiens GN=ZNF800 PE=1 SV=1 0.811563 6.34157 0.025866 52.5 30.943 52.5 1 S NTPAAQKNKVKQDSESPKSTSPSAAGGQQKT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX VKQDS(0.188)ES(0.812)PK VKQDS(-6.34)ES(6.34)PK 7 3 -1.0483 16024 0 0 14892 0 0 16735 0 0 15777 0 0 11082 0 0 18291 0 0 10610 0 0 13902 0 0 15908 0 0 4473.6 0 0 15165 0 0 14073 0 0 16740 0 0 16186 0 0 11578 0 0 18175 0 0 10968 0 0 14250 0 0 15472 0 0 4534.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13667000 13667000 0 0 NaN 1957 1123 457 457 5148 5485 5843 6495 5843 6495 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8157 5843 6495 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8157 5843 6495 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8157 Q2VPK5 419 Q2VPK5 Q2VPK5 Cytoplasmic tRNA 2-thiolation protein 2 CTU2 sp|Q2VPK5|CTU2_HUMAN Cytoplasmic tRNA 2-thiolation protein 2 OS=Homo sapiens GN=CTU2 PE=1 SV=1 0.996566 24.6279 9.14211E-16 231.15 208.16 231.15 1 S TAFGAQTSSRLSQMQSPIPLTETRTPPGPCC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPXXXXXXX LSQMQS(0.997)PIPLT(0.003)ETR LS(-78.82)QMQS(24.63)PIPLT(-24.63)ET(-65.58)R 6 2 -1.8185 8151.9 0 0 20416 0 0 9240.7 0 0 18932 0 0 4985.2 0 0 8332.6 0 0 4178.6 0 0 12012 0 0 21722 0 0 18139 0 0 7717.8 0 0 19278 0 0 9188.7 0 0 19359 0 0 5315.4 0 0 8905.6 0 0 4772.7 0 0 12453 0 0 20689 0 0 17358 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21597000 21597000 0 0 NaN 1958 1124 419 419 2581 2725 2923 3257 2923 3257 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17978 2923 3257 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17978 2923 3257 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17978 Q32MZ4 16 Q32MZ4 Q32MZ4 Leucine-rich repeat flightless-interacting protein 1 LRRFIP1 sp|Q32MZ4|LRRF1_HUMAN Leucine-rich repeat flightless-interacting protein 1 OS=Homo sapiens GN=LRRFIP1 PE=1 SV=2 1 201.083 2.14138E-10 201.08 149.36 201.08 1 S MTSPAAAQSREIDCLSPEAQKLAEARLAAKR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX EIDCLS(1)PEAQK EIDCLS(201.08)PEAQK 6 2 -0.41022 22289 0 0 12705 0 0 22598 0 0 13483 0 0 10184 0 0 21768 0 0 10804 0 0 14862 0 0 13077 0 0 13406 0 0 21092 0 0 12006 0 0 22587 0 0 13930 0 0 11079 0 0 21388 0 0 11030 0 0 15579 0 0 12807 0 0 12967 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15940000 15940000 0 0 NaN 1959 1125 16 16 992 1047 1133 1250 1133 1250 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14250 1133 1250 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14250 1133 1250 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14250 Q32MZ4 714 Q32MZ4 Q32MZ4 Leucine-rich repeat flightless-interacting protein 1 LRRFIP1 sp|Q32MZ4|LRRF1_HUMAN Leucine-rich repeat flightless-interacting protein 1 OS=Homo sapiens GN=LRRFIP1 PE=1 SV=2 0.865474 8.08645 6.55379E-05 124.43 92.159 124.43 1 S GVAKDNAKIDGATQSSPAEPKSEDADRCTLP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPXXXXXXXXXX IDGATQS(0.134)S(0.865)PAEPK IDGAT(-41.49)QS(-8.09)S(8.09)PAEPK 8 3 -0.11801 64630 0 0 44508 0 0 70169 0 0 47551 0 0 35442 0 0 66325 0 0 44578 0 0 49498 0 0 47591 0 0 10792 0 0 61178 0 0 42062 0 0 69930 0 0 48940 0 0 38149 0 0 65452 0 0 45020 0 0 50627 0 0 46830 0 0 11308 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 97953000 97953000 0 0 NaN 1960 1125 714 714 1791 1891 2038 2271;2272 2038 2271 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10919 2038 2271 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10919 2038 2271 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10919 Q32MZ4 115 Q32MZ4 Q32MZ4 Leucine-rich repeat flightless-interacting protein 1 LRRFIP1 sp|Q32MZ4|LRRF1_HUMAN Leucine-rich repeat flightless-interacting protein 1 OS=Homo sapiens GN=LRRFIP1 PE=1 SV=2 0.499406 2.00743 6.99798E-05 102.72 82.065 102.72 S MPGLSAATLASLGGTSSRRGSGDTSISIDTE Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX NMPGLSAATLAS(0.002)LGGT(0.184)S(0.499)S(0.315)R NMPGLS(-80.15)AAT(-55.66)LAS(-23.69)LGGT(-4.34)S(2.01)S(-2.01)R 17 3 -0.20547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1961 1125 115 115 2872 3044;3045 3260 3616 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18402 3260 3616 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18402 3260 3616 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18402 Q32MZ4 116 Q32MZ4 Q32MZ4 Leucine-rich repeat flightless-interacting protein 1 LRRFIP1 sp|Q32MZ4|LRRF1_HUMAN Leucine-rich repeat flightless-interacting protein 1 OS=Homo sapiens GN=LRRFIP1 PE=1 SV=2 0.830355 9.38025 2.52048E-16 235.19 222.05 235.19 1 S PGLSAATLASLGGTSSRRGSGDTSISIDTEA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPXXXXXXXXXXXXXX NMPGLSAATLASLGGT(0.074)S(0.096)S(0.83)R NMPGLS(-164.19)AAT(-116.18)LAS(-57.83)LGGT(-10.51)S(-9.38)S(9.38)R 18 3 -0.53432 2777.3 0 0 2043.3 0 0 3772.4 0 0 2875.1 0 0 2323.7 0 0 3626.5 0 0 2094.2 0 0 3303.6 0 0 2198.7 0 0 18159 0 0 2631.8 0 0 1935 0 0 3723.2 0 0 2913.3 0 0 2440.5 0 0 3631.6 0 0 2145.6 0 0 3873.4 0 0 2165.1 0 0 17175 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37575000 37575000 0 0 NaN 1962 1125 116 116 2872 3044;3045 3261 3617 3261 3617 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21244 3261 3617 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21244 3261 3617 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21244 Q32P44 176 Q32P44 Q32P44 Echinoderm microtubule-associated protein-like 3 EML3 sp|Q32P44|EMAL3_HUMAN Echinoderm microtubule-associated protein-like 3 OS=Homo sapiens GN=EML3 PE=1 SV=1 0.926101 10.9802 0.00783731 80.411 60.03 80.411 1 S SPSERPRQKLSRKAISSANLLVRSGSTESRG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX KAIS(0.926)S(0.074)ANLLVR KAIS(10.98)S(-10.98)ANLLVR 4 3 -1.0451 16614 0 0 9969.7 0 0 17971 0 0 11076 0 0 14500 0 0 15029 0 0 17836 0 0 14374 0 0 10899 0 0 3260.3 0 0 15726 0 0 9424.3 0 0 17981 0 0 11368 0 0 14960 0 0 14886 0 0 17805 0 0 14542 0 0 11048 0 0 3402.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 67980000 67980000 0 0 NaN 1963 1126 176 176 258;2006 277;2121 2285 2551 2285 2551 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16218 2285 2551 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16218 2285 2551 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16218 Q32P44 177 Q32P44 Q32P44 Echinoderm microtubule-associated protein-like 3 EML3 sp|Q32P44|EMAL3_HUMAN Echinoderm microtubule-associated protein-like 3 OS=Homo sapiens GN=EML3 PE=1 SV=1 0.640301 2.50445 1.96911E-09 179.67 142.91 179.67 1 S PSERPRQKLSRKAISSANLLVRSGSTESRGG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX AIS(0.36)S(0.64)ANLLVR AIS(-2.5)S(2.5)ANLLVR 4 2 0.79612 22327 0 0 15559 0 0 22247 0 0 13832 0 0 22815 0 0 18771 0 0 22741 0 0 19583 0 0 14772 0 0 6471.9 0 0 21126 0 0 14688 0 0 22413 0 0 14387 0 0 23111 0 0 18617 0 0 22934 0 0 19807 0 0 14913 0 0 6547.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 61719000 61719000 0 0 NaN 1964 1126 177 177 258;2006 277;2121 298 332 298 332 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17873 298 332 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17873 298 332 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17873 Q32P44 889 Q32P44 Q32P44 Echinoderm microtubule-associated protein-like 3 EML3 sp|Q32P44|EMAL3_HUMAN Echinoderm microtubule-associated protein-like 3 OS=Homo sapiens GN=EML3 PE=1 SV=1 0.977995 19.4884 6.70762E-07 138.76 123.62 138.76 1 S GAGPAPATPSRTPSLSPASSLDV________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX T(0.011)PS(0.011)LS(0.978)PASSLDV T(-19.49)PS(-19.49)LS(19.49)PAS(-67.54)S(-82.96)LDV 5 2 -0.51265 7736.2 0 0 7914.5 0 0 8420.4 0 0 7256.4 0 0 7398.4 0 0 7784.2 0 0 7923.8 0 0 7813.4 0 0 7701.4 0 0 11595 0 0 7323 0 0 7472.8 0 0 8428 0 0 7499.3 0 0 7575.5 0 0 7801.1 0 0 8034.4 0 0 8185.7 0 0 7608.4 0 0 11099 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19926000 19926000 0 0 NaN 1965 1126 889 889 4849 5174 5513 6131 5513 6131 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19939 5513 6131 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19939 5513 6131 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19939 Q3KQU3 460 Q3KQU3 Q3KQU3 MAP7 domain-containing protein 1 MAP7D1 sp|Q3KQU3|MA7D1_HUMAN MAP7 domain-containing protein 1 OS=Homo sapiens GN=MAP7D1 PE=1 SV=1 1 69.6638 4.02077E-09 175.66 154.1 175.66 1 S ASPRARLSASTASELSPKSKARPSSPSTSWH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX LSASTASELS(1)PK LS(-125.01)AS(-112.97)T(-101.37)AS(-69.66)ELS(69.66)PK 10 3 -0.37284 10667 0 0 15588 0 0 9807.9 0 0 15886 0 0 13400 0 0 11620 0 0 13996 0 0 15647 0 0 19027 0 0 3672.6 0 0 10091 0 0 14727 0 0 9970.5 0 0 16225 0 0 13399 0 0 11895 0 0 14356 0 0 15649 0 0 18560 0 0 3820.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 35378000 35378000 0 0 NaN 1966 1127 460 460 2549 2693 2890 3223 2890 3223 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14504 2890 3223 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14504 2890 3223 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14504 Q3L8U1 2079 Q3L8U1 Q3L8U1 Chromodomain-helicase-DNA-binding protein 9 CHD9 sp|Q3L8U1|CHD9_HUMAN Chromodomain-helicase-DNA-binding protein 9 OS=Homo sapiens GN=CHD9 PE=1 SV=2 0.999595 33.9273 0.0403163 56.013 26.675 56.013 1 S MSSVETRTLIKSEPVSPKNGVLPQATGDQKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX SEPVS(1)PK S(-33.93)EPVS(33.93)PK 5 2 3.2825 19462 0 0 29049 0 0 19465 0 0 27852 0 0 25956 0 0 21342 0 0 22140 0 0 23183 0 0 28554 0 0 3295.3 0 0 18416 0 0 27435 0 0 19673 0 0 28566 0 0 25909 0 0 21712 0 0 22895 0 0 23282 0 0 27902 0 0 3639.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10464000 10464000 0 0 NaN 1967 1128 2079 2079 3696 3931 4191 4657 4191 4657 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8783 4191 4657 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8783 4191 4657 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8783 Q3MII6 506 Q3MII6 Q3MII6 TBC1 domain family member 25 TBC1D25 sp|Q3MII6|TBC25_HUMAN TBC1 domain family member 25 OS=Homo sapiens GN=TBC1D25 PE=1 SV=2 1 103.767 0.000275398 103.77 77.853 103.77 1 S ASQGPGGGGRLLRQASLDGLQQLRDNMGSRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX QAS(1)LDGLQQLR QAS(103.77)LDGLQQLR 3 2 0.87099 17230 0 0 21347 0 0 17451 0 0 21695 0 0 19501 0 0 19950 0 0 18534 0 0 21062 0 0 23080 0 0 14641 0 0 16304 0 0 20167 0 0 17583 0 0 22226 0 0 19659 0 0 20117 0 0 19037 0 0 21525 0 0 22580 0 0 14274 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14251000 14251000 0 0 NaN 1968 1130 506 506 2999 3179 3402 3772 3402 3772 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16121 3402 3772 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16121 3402 3772 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16121 Q3V6T2 1417 Q3V6T2 Q3V6T2 Girdin CCDC88A sp|Q3V6T2|GRDN_HUMAN Girdin OS=Homo sapiens GN=CCDC88A PE=1 SV=2 0.983203 17.8077 0.000192059 111.83 83.088 111.83 1 S KLIKSKKDINRERQKSLTLTPTRSDSSEGFL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX QKS(0.983)LT(0.016)LT(0.001)PTR QKS(17.81)LT(-17.81)LT(-32.87)PT(-60.37)R 3 3 -0.57134 30383 0 0 14391 0 0 28505 0 0 13095 0 0 17641 0 0 30559 0 0 20136 0 0 20848 0 0 12922 0 0 3299.5 0 0 28743 0 0 13587 0 0 28682 0 0 13805 0 0 18572 0 0 29736 0 0 20180 0 0 21387 0 0 13056 0 0 3589.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29699000 29699000 0 0 NaN 1969 1131 1417 1417 3057 3243 3470 3844 3470 3844 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12358 3470 3844 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12358 3470 3844 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12358 Q3V6T2 1820 Q3V6T2 Q3V6T2 Girdin CCDC88A sp|Q3V6T2|GRDN_HUMAN Girdin OS=Homo sapiens GN=CCDC88A PE=1 SV=2 0.827282 6.80317 0.00590856 85.493 59.963 85.493 1 S ASSVISTAEGTTRRTSIHDFLTKDSRLPISV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX RT(0.173)S(0.827)IHDFLTK RT(-6.8)S(6.8)IHDFLT(-58.96)K 3 3 0.15776 6299.1 0 0 7541.8 0 0 8533.4 0 0 6030.4 0 0 10144 0 0 8027.2 0 0 10743 0 0 9837.9 0 0 7071.4 0 0 13890 0 0 5968.9 0 0 7115.8 0 0 8485 0 0 6316.2 0 0 10205 0 0 8005.8 0 0 10806 0 0 10216 0 0 7133.1 0 0 13307 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10572000 10572000 0 0 NaN 1970 1131 1820 1820 3534 3751 3997 4437 3997 4437 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15369 3997 4437 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15369 3997 4437 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15369 Q3V6T2 1653 Q3V6T2 Q3V6T2 Girdin CCDC88A sp|Q3V6T2|GRDN_HUMAN Girdin OS=Homo sapiens GN=CCDC88A PE=1 SV=2 0.850571 7.55274 0.000256035 129.16 85.714 129.16 1 S SGSSPIQYLKRQTRSSPVLQHKISETLESRH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPXXXXXXXXX S(0.149)S(0.851)PVLQHK S(-7.55)S(7.55)PVLQHK 2 3 -0.21463 8193.3 0 0 9294.7 0 0 8820.8 0 0 10308 0 0 14463 0 0 8189.4 0 0 15354 0 0 11963 0 0 10150 0 0 1381.2 0 0 7755.3 0 0 8786.1 0 0 8916.7 0 0 10488 0 0 14351 0 0 8353.2 0 0 15444 0 0 11896 0 0 10236 0 0 1577.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10651000 10651000 0 0 NaN 1971 1131 1653 1653 4402 4690 4994 5541 4994 5541 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8855 4994 5541 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8855 4994 5541 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8855 Q3V6T2 1700 Q3V6T2 Q3V6T2 Girdin CCDC88A sp|Q3V6T2|GRDN_HUMAN Girdin OS=Homo sapiens GN=CCDC88A PE=1 SV=2 0.364676 0 0.000130069 110.26 57.916 110.26 S QFLEESNKLTSVQIKSSSQENLLDEVMKSLS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX S(0.365)S(0.365)S(0.271)QENLLDEVMK S(0)S(0)S(-1.3)QENLLDEVMK 1 3 -0.23483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1972 1131 1700 1700 4460 4751 5056 5611 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22572 5056 5611 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22572 5056 5611 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22572 Q3V6T2 1701 Q3V6T2 Q3V6T2 Girdin CCDC88A sp|Q3V6T2|GRDN_HUMAN Girdin OS=Homo sapiens GN=CCDC88A PE=1 SV=2 0.364676 0 0.000130069 110.26 57.916 110.26 S FLEESNKLTSVQIKSSSQENLLDEVMKSLSV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.365)S(0.365)S(0.271)QENLLDEVMK S(0)S(0)S(-1.3)QENLLDEVMK 2 3 -0.23483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 1973 1131 1701 1701 4460 4751 5056 5611 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22572 5056 5611 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22572 5056 5611 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22572 Q3YEC7 641 Q3YEC7 Q3YEC7 Rab-like protein 6 RABL6 sp|Q3YEC7|RABL6_HUMAN Rab-like protein 6 OS=Homo sapiens GN=RABL6 PE=1 SV=2 0.986596 18.669 0.00831485 74.649 58.758 74.649 1 S DLFGLGLEEAGPKESSEEGKEGKTPSKEKKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX ES(0.013)S(0.987)EEGKEGK ES(-18.67)S(18.67)EEGKEGK 3 3 -1.3219 23625 0 0 20797 0 0 27375 0 0 19941 0 0 24550 0 0 27356 0 0 23993 0 0 24258 0 0 20866 0 0 5569.6 0 0 22369 0 0 19641 0 0 27314 0 0 20646 0 0 25070 0 0 27061 0 0 24364 0 0 24620 0 0 20722 0 0 5805.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13709000 13709000 0 0 NaN 1974 1132 641 641 1165 1226 1323 1462 1323 1462 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7292 1323 1462 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7292 1323 1462 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7292 Q49A26 130 Q49A26 Q49A26 Putative oxidoreductase GLYR1 GLYR1 sp|Q49A26|GLYR1_HUMAN Putative oxidoreductase GLYR1 OS=Homo sapiens GN=GLYR1 PE=1 SV=3 0.772292 5.30403 0.000617601 117.95 65.046 117.95 1 S EERSRPNSGDEKRKLSLSEGKVKKNMGEGKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX KLS(0.772)LS(0.228)EGK KLS(5.3)LS(-5.3)EGK 3 3 0.12197 51597 0 0 25725 0 0 53788 0 0 27442 0 0 117990 0 0 56091 0 0 125000 0 0 67124 0 0 25919 0 0 4204 0 0 48832 0 0 24312 0 0 54835 0 0 28533 0 0 115950 0 0 55090 0 0 124190 0 0 67029 0 0 29777 0 0 5512.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 102120000 102120000 0 0 NaN 1975 1134 130 130 2128 2249 2422 2699 2422 2699 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13807 2422 2699 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13807 2422 2699 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13807 Q4AC94 2346 Q4AC94 Q4AC94 C2 domain-containing protein 3 C2CD3 sp|Q4AC94|C2CD3_HUMAN C2 domain-containing protein 3 OS=Homo sapiens GN=C2CD3 PE=1 SV=4 0.651041 0 0.0509208 41.54 16.749 41.54 2 S LNLPEEETLRIARIFSSQYSQKD________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX IARIFS(0.651)S(0.651)QY(0.687)S(0.011)QK IARIFS(0)S(0)QY(0.49)S(-19.67)QK 6 3 4.2648 0 11591 0 0 7355.7 0 0 10617 0 0 7620.3 0 0 5040.9 0 0 11450 0 0 6470.1 0 0 9189 0 0 8491.8 0 0 3905.9 0 0 10964 0 0 6950.2 0 0 10681 0 0 7869.7 0 0 5466.8 0 0 11285 0 0 6572.7 0 0 9422.5 0 0 8293.1 0 0 3890.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 18175000 0 18175000 0 NaN 1976 1135 2346 2346 1778 1877 2024 2255 2024 2255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17575 2024 2255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17575 2024 2255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17575 Q4AC94 2347 Q4AC94 Q4AC94 C2 domain-containing protein 3 C2CD3 sp|Q4AC94|C2CD3_HUMAN C2 domain-containing protein 3 OS=Homo sapiens GN=C2CD3 PE=1 SV=4 0.651041 0 0.0509208 41.54 16.749 41.54 2 S NLPEEETLRIARIFSSQYSQKD_________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IARIFS(0.651)S(0.651)QY(0.687)S(0.011)QK IARIFS(0)S(0)QY(0.49)S(-19.67)QK 7 3 4.2648 0 11591 0 0 7355.7 0 0 10617 0 0 7620.3 0 0 5040.9 0 0 11450 0 0 6470.1 0 0 9189 0 0 8491.8 0 0 3905.9 0 0 10964 0 0 6950.2 0 0 10681 0 0 7869.7 0 0 5466.8 0 0 11285 0 0 6572.7 0 0 9422.5 0 0 8293.1 0 0 3890.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 18175000 0 18175000 0 NaN 1977 1135 2347 2347 1778 1877 2024 2255 2024 2255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17575 2024 2255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17575 2024 2255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17575 Q4ADV7 1017 Q4ADV7 Q4ADV7 RAB6A-GEF complex partner protein 1 RIC1 sp|Q4ADV7|RIC1_HUMAN RAB6A-GEF complex partner protein 1 OS=Homo sapiens GN=RIC1 PE=1 SV=2 0.566372 2.63021 8.43356E-08 172.12 139.97 172.12 1 S PSSSGGFEFFRNRSISLSQSAENVPASKFSL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX S(0.125)IS(0.566)LS(0.309)QSAENVPASK S(-6.58)IS(2.63)LS(-2.63)QS(-46.61)AENVPAS(-148.29)K 3 3 -0.18306 7918.2 0 0 7048.7 0 0 7683.7 0 0 7325 0 0 8660.6 0 0 7903.6 0 0 7701.6 0 0 7985.1 0 0 6307.6 0 0 8509 0 0 7491.8 0 0 6660.2 0 0 7760.6 0 0 7513.5 0 0 8716.3 0 0 7913.4 0 0 7847.5 0 0 8262.9 0 0 6282.8 0 0 8197 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7244600 7244600 0 0 NaN 1978 1136 1017 1017 3866 4119 4395 4889 4395 4889 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15221 4395 4889 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15221 4395 4889 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15221 Q4G0F5 302 Q4G0F5 Q4G0F5 Vacuolar protein sorting-associated protein 26B VPS26B sp|Q4G0F5|VP26B_HUMAN Vacuolar protein sorting-associated protein 26B OS=Homo sapiens GN=VPS26B PE=1 SV=2 0.867449 8.15861 0.00237576 94.569 77.358 94.569 1 S QQEVVLWRKGDIVRKSMSHQAAIASQRFEGT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(0.867)MS(0.133)HQAAIASQR S(8.16)MS(-8.16)HQAAIAS(-61.95)QR 1 3 -1.5717 9333.5 0 0 9828.3 0 0 9542 0 0 9550.4 0 0 9704 0 0 9159.7 0 0 10434 0 0 11345 0 0 8683.7 0 0 1922.4 0 0 8832.6 0 0 9282.8 0 0 9599.6 0 0 9816.7 0 0 9846.7 0 0 9229.7 0 0 10537 0 0 11353 0 0 8642.4 0 0 2072.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20050000 20050000 0 0 NaN 1979 1137 302 302 4035 4304 4592 5100 4592 5100 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7499 4592 5100 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7499 4592 5100 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7499 Q4G0J3 298 Q4G0J3 Q4G0J3 La-related protein 7 LARP7 sp|Q4G0J3|LARP7_HUMAN La-related protein 7 OS=Homo sapiens GN=LARP7 PE=1 SV=1 0.978979 16.704 1.02152E-22 267.56 234.56 267.56 1 S EASSLPEVRTGKRKRSSSEDAESLAPRSKVK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX KRS(0.979)S(0.021)SEDAESLAPR KRS(16.7)S(-16.7)S(-39.48)EDAES(-80.58)LAPR 3 3 0.069511 28582 0 0 17799 0 0 30076 0 0 18896 0 0 20025 0 0 30351 0 0 22269 0 0 24354 0 0 18776 0 0 3714.6 0 0 27051 0 0 16820 0 0 30080 0 0 19519 0 0 20943 0 0 29842 0 0 22464 0 0 24773 0 0 18674 0 0 4061.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 90428000 90428000 0 0 NaN 1980 1138 298 298 2206 2332 2513 2806 2513 2806 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8503 2513 2806 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8503 2513 2806 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8503 Q4G0J3 261 Q4G0J3 Q4G0J3 La-related protein 7 LARP7 sp|Q4G0J3|LARP7_HUMAN La-related protein 7 OS=Homo sapiens GN=LARP7 PE=1 SV=1 0.999718 35.8181 5.27706E-11 196.96 169.11 196.96 1 S TSISKMKRSRPTSEGSDIESTEPQKQCSKKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPXXXXXX SRPTSEGS(1)DIESTEPQK S(-58.06)RPT(-50.66)S(-35.82)EGS(35.82)DIES(-50.25)T(-61.3)EPQK 8 3 -0.078579 35261 0 0 32862 0 0 33851 0 0 34508 0 0 20693 0 0 38936 0 0 25603 0 0 26849 0 0 34276 0 0 11235 0 0 33361 0 0 31053 0 0 34015 0 0 35402 0 0 21854 0 0 38700 0 0 26064 0 0 27739 0 0 33453 0 0 11201 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 75105000 75105000 0 0 NaN 1981 1138 261 261 4271 4550 4849 5381 4849 5381 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9040 4849 5381 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9040 4849 5381 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9040 Q4KMP7 678 Q4KMP7 Q4KMP7 TBC1 domain family member 10B TBC1D10B sp|Q4KMP7|TB10B_HUMAN TBC1 domain family member 10B OS=Homo sapiens GN=TBC1D10B PE=1 SV=3 1 117.63 0.000161308 117.63 75.925 117.63 1 S PGLKSRGSRAAGGAPSPPPPVRRASAGPAPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPXXXXXXXXX AAGGAPS(1)PPPPVR AAGGAPS(117.63)PPPPVR 7 2 0.709 20190 0 0 19980 0 0 21881 0 0 22929 0 0 17628 0 0 18963 0 0 16609 0 0 19421 0 0 25009 0 0 7521.9 0 0 19112 0 0 18892 0 0 21882 0 0 23299 0 0 18134 0 0 19204 0 0 17185 0 0 19690 0 0 24320 0 0 7532.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21052000 21052000 0 0 NaN 1982 1139 678 678 33 35 39 49 39 49 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9577 39 49 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9577 39 49 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9577 Q4KMP7 132 Q4KMP7 Q4KMP7 TBC1 domain family member 10B TBC1D10B sp|Q4KMP7|TB10B_HUMAN TBC1 domain family member 10B OS=Homo sapiens GN=TBC1D10B PE=1 SV=3 0.743328 4.61812 1.3721E-07 141.16 100.91 141.16 1 S VAGVETSRALAAGADSPKTEEARPSPAPGPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPPP ALAAGADS(0.743)PKT(0.257)EEARPSPAPGPGTPTGTPTR ALAAGADS(4.62)PKT(-4.62)EEARPS(-50.88)PAPGPGT(-83.2)PT(-94.9)GT(-98.91)PT(-107.26)R 8 4 2.2376 14637 0 0 11487 0 0 14520 0 0 12427 0 0 12128 0 0 14553 0 0 12607 0 0 13678 0 0 12919 0 0 6313.3 0 0 13850 0 0 10857 0 0 14599 0 0 12736 0 0 12456 0 0 14494 0 0 12818 0 0 13945 0 0 12734 0 0 6261.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13305000 13305000 0 0 NaN 1983 1139 132 132 282 303 324 362 324 362 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11197 324 362 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11197 324 362 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11197 Q4KMQ1 241 Q4KMQ1 Q4KMQ1 Taperin TPRN sp|Q4KMQ1|TPRN_HUMAN Taperin OS=Homo sapiens GN=TPRN PE=1 SV=2 0.762459 5.06477 0.00776306 79.837 55.986 79.837 1 S SAPEPRAGPANRLAGSPPGSGQWKPKVESGD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX LAGS(0.762)PPGS(0.238)GQWKPK LAGS(5.06)PPGS(-5.06)GQWKPK 4 3 -0.45884 15016 0 0 13365 0 0 15679 0 0 15260 0 0 20102 0 0 16083 0 0 19206 0 0 16335 0 0 12789 0 0 8474.3 0 0 14211 0 0 12636 0 0 15803 0 0 15566 0 0 20119 0 0 16103 0 0 19418 0 0 16631 0 0 12891 0 0 8357.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17438000 17438000 0 0 NaN 1984 1140 241 241 2286 2415 2599 2904 2599 2904 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15570 2599 2904 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15570 2599 2904 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15570 Q4L180 791 Q4L180 Q4L180 Filamin A-interacting protein 1-like FILIP1L sp|Q4L180|FIL1L_HUMAN Filamin A-interacting protein 1-like OS=Homo sapiens GN=FILIP1L PE=1 SV=2 1 74.492 0.00317525 93.237 50.494 93.237 1 S HFSKSLRPSLNGRRISDPQVFSKEVQTEAVD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX RIS(1)DPQVFSK RIS(74.49)DPQVFS(-74.49)K 3 3 -0.25258 7501 0 0 7296.4 0 0 8412.8 0 0 7311.4 0 0 11895 0 0 7389 0 0 11609 0 0 9959 0 0 7494 0 0 4025.7 0 0 7101.3 0 0 6892.7 0 0 8460.9 0 0 7507.4 0 0 11858 0 0 7442.7 0 0 11718 0 0 10011 0 0 7568.9 0 0 4021.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7493600 7493600 0 0 NaN 1985 1141 791 791 3280 3480 3717 4130 3717 4130 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14811 3717 4130 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14811 3717 4130 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14811 Q4LE39 1029 Q4LE39 Q4LE39 AT-rich interactive domain-containing protein 4B ARID4B sp|Q4LE39|ARI4B_HUMAN AT-rich interactive domain-containing protein 4B OS=Homo sapiens GN=ARID4B PE=1 SV=2 0.892357 14.5234 4.97356E-05 103.99 86.627 103.99 1 S SGSNSVLNTPPTTPESPSSVTVTEGSRQQSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPXXXX KAEFPSSGSNSVLNTPPT(0.027)T(0.021)PES(0.892)PS(0.026)S(0.031)VT(0.002)VTEGSR KAEFPS(-83.41)S(-81.78)GS(-73.75)NS(-66.04)VLNT(-34.36)PPT(-15.24)T(-16.27)PES(14.52)PS(-15.42)S(-14.52)VT(-26.03)VT(-37.09)EGS(-40.96)R 22 4 -0.063294 2788.3 0 0 2533.5 0 0 2436.6 0 0 2073 0 0 2720.7 0 0 2925.4 0 0 2333.1 0 0 3325.3 0 0 2749.6 0 0 14436 0 0 2637.1 0 0 2390.7 0 0 2476.5 0 0 2170.3 0 0 2739.1 0 0 2926.4 0 0 2404.9 0 0 3755 0 0 2695.3 0 0 13670 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8887100 8887100 0 0 NaN 1986 1142 1029 1029 1995 2110 2274 2540 2274 2540 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16262 2274 2540 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16262 2274 2540 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16262 Q4LE39 838 Q4LE39 Q4LE39 AT-rich interactive domain-containing protein 4B ARID4B sp|Q4LE39|ARI4B_HUMAN AT-rich interactive domain-containing protein 4B OS=Homo sapiens GN=ARID4B PE=1 SV=2 0.950448 12.8287 0.0226385 62.162 40.604 62.162 1 S GKRRYCNTEECLKTGSPGKKEEKAKNKESLC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX T(0.05)GS(0.95)PGKKEEK T(-12.83)GS(12.83)PGKKEEK 3 3 0.51999 17869 0 0 19318 0 0 17310 0 0 20434 0 0 19966 0 0 19906 0 0 20698 0 0 20839 0 0 22212 0 0 4740.4 0 0 16906 0 0 18255 0 0 17496 0 0 20905 0 0 20117 0 0 19997 0 0 21075 0 0 21010 0 0 21853 0 0 4945.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18919000 18919000 0 0 NaN 1987 1142 838 838 4731 5045 5376 5979 5376 5979 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7505 5376 5979 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7505 5376 5979 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7505 Q4V328 692 Q4V328 Q4V328 GRIP1-associated protein 1 GRIPAP1 sp|Q4V328|GRAP1_HUMAN GRIP1-associated protein 1 OS=Homo sapiens GN=GRIPAP1 PE=1 SV=1 0.861631 8.77194 2.64225E-05 129.88 115.42 129.88 1 S REKESSAVPARSLSSSPQAQPPRPAELSDEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP S(0.001)LS(0.023)S(0.114)S(0.862)PQAQPPRPAELSDEEVAELFQR S(-29.19)LS(-15.73)S(-8.77)S(8.77)PQAQPPRPAELS(-58.18)DEEVAELFQR 5 3 -0.005197 4288.9 0 0 4618.8 0 0 4815.7 0 0 3602.7 0 0 4250.9 0 0 3909.8 0 0 5589.4 0 0 4870.4 0 0 3940.5 0 0 36677 0 0 4060.3 0 0 4357.4 0 0 4814.5 0 0 3766.1 0 0 4364.6 0 0 3986.4 0 0 5580.1 0 0 5953.3 0 0 3958 0 0 34648 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13076000 13076000 0 0 NaN 1988 1143 692 692 4005 4270 4558 5066 4558 5066 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21709 4558 5066 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21709 4558 5066 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21709 Q52LA3 53 Q52LA3 Q52LA3 Protein lin-52 homolog LIN52 sp|Q52LA3|LIN52_HUMAN Protein lin-52 homolog OS=Homo sapiens GN=LIN52 PE=1 SV=1 0.644528 3.26042 0.0199484 63.694 24.39 63.694 1 S GVAEFAASFKSPITSSPPKWMAEIERDDIDM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX S(0.006)PIT(0.045)S(0.304)S(0.645)PPK S(-20.39)PIT(-11.53)S(-3.26)S(3.26)PPK 6 2 -0.1368 61578 0 0 26495 0 0 59885 0 0 25332 0 0 32803 0 0 58975 0 0 34656 0 0 42324 0 0 24881 0 0 9516.9 0 0 58263 0 0 25022 0 0 60070 0 0 26622 0 0 34904 0 0 57421 0 0 34920 0 0 43386 0 0 24965 0 0 9940.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20382000 20382000 0 0 NaN 1989 1144 53 53 4125 4398 4689 5205 4689 5205 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11823 4689 5205 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11823 4689 5205 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11823 Q53EL6 457 Q53EL6 Q53EL6 Programmed cell death protein 4 PDCD4 sp|Q53EL6|PDCD4_HUMAN Programmed cell death protein 4 OS=Homo sapiens GN=PDCD4 PE=1 SV=2 1 132.092 8.60699E-06 139.98 103.54 132.09 1 S QLRDLCPSRGRKRFVSEGDGGRLKPESY___ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX RFVS(1)EGDGGR RFVS(132.09)EGDGGR 4 3 0.5104 110480 0 0 59373 0 0 116400 0 0 54649 0 0 74615 0 0 111790 0 0 83645 0 0 85181 0 0 53676 0 0 6558.8 0 0 104570 0 0 56061 0 0 116380 0 0 57319 0 0 78286 0 0 109180 0 0 83889 0 0 86671 0 0 54234 0 0 8147.3 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 785580000 785580000 0 0 NaN 1990 1145 457 457 1343;3238 1416;3435 1523;3671 1686;4074 3671 4074 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7982 1523 1686 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10405 1523 1686 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10405 Q53EL6 94 Q53EL6 Q53EL6 Programmed cell death protein 4 PDCD4 sp|Q53EL6|PDCD4_HUMAN Programmed cell death protein 4 OS=Homo sapiens GN=PDCD4 PE=1 SV=2 0.995987 23.9479 2.04554E-09 178.36 137.48 178.36 1 S DSGSDALRSGLTVPTSPKGRLLDRRSRSGKG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX SGLTVPT(0.004)S(0.996)PK S(-99.68)GLT(-63.46)VPT(-23.95)S(23.95)PK 8 2 -0.16196 87238 0 0 28881 0 0 86330 0 0 30720 0 0 113350 0 0 78644 0 0 123900 0 0 78906 0 0 31719 0 0 12285 0 0 82546 0 0 27293 0 0 87332 0 0 32200 0 0 113490 0 0 76716 0 0 123080 0 0 79509 0 0 35207 0 0 13394 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 1687300000 1687300000 0 0 NaN 1991 1145 94 94 3790;3791 4037;4038 4306;4307 4785;4786 4306 4785 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13957 4306 4785 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13957 4306 4785 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13957 Q53ET0 613 Q53ET0 Q53ET0 CREB-regulated transcription coactivator 2 CRTC2 sp|Q53ET0|CRTC2_HUMAN CREB-regulated transcription coactivator 2 OS=Homo sapiens GN=CRTC2 PE=1 SV=2 0.999995 52.917 4.71419E-06 136.26 118.25 136.26 1 S HTFNHQNLTHCSRHGSGPNIILTGDSSPGFS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP HGS(1)GPNIILTGDSSPGFSK HGS(52.92)GPNIILT(-52.92)GDS(-89.39)S(-97.24)PGFS(-113.9)K 3 3 0.048731 11648 0 0 14658 0 0 12794 0 0 12638 0 0 13207 0 0 12792 0 0 14220 0 0 14972 0 0 15486 0 0 11171 0 0 11026 0 0 13835 0 0 12824 0 0 13103 0 0 13393 0 0 12863 0 0 14461 0 0 15270 0 0 15226 0 0 10865 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 115960000 115960000 0 0 NaN 1992 1146 613 613 1715 1809 1954 2178 1954 2178 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17153 1954 2178 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17153 1954 2178 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17153 Q53ET0 433 Q53ET0 Q53ET0 CREB-regulated transcription coactivator 2 CRTC2 sp|Q53ET0|CRTC2_HUMAN CREB-regulated transcription coactivator 2 OS=Homo sapiens GN=CRTC2 PE=1 SV=2 0.999519 33.1726 1.75411E-05 133.1 113.43 133.1 1 S ASTPGASPHHRRVPLSPLSLLAGPADARRSQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPXXX RVPLS(1)PLSLLAGPADAR RVPLS(33.17)PLS(-33.17)LLAGPADAR 5 3 -0.48068 11318 0 0 12940 0 0 11899 0 0 14308 0 0 10150 0 0 10753 0 0 9339.4 0 0 14366 0 0 15308 0 0 108860 0 0 10712 0 0 12232 0 0 11925 0 0 14551 0 0 10398 0 0 11187 0 0 9709 0 0 17550 0 0 14851 0 0 102830 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 49204000 49204000 0 0 NaN 1993 1146 433 433 3549;5206 3767;5550 4013;5914 4454;6571 4013 4454 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23328 4013 4454 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23328 4013 4454 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23328 Q53EU6 68 Q53EU6 Q53EU6 Glycerol-3-phosphate acyltransferase 3 AGPAT9 sp|Q53EU6|GPAT3_HUMAN Glycerol-3-phosphate acyltransferase 3 OS=Homo sapiens GN=AGPAT9 PE=1 SV=2 0.997113 25.3833 0.00024807 118.24 50.855 118.24 1 S IEKGTPKESILKNSASVGIIQRDESPMEKGL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX NS(0.003)AS(0.997)VGIIQR NS(-25.38)AS(25.38)VGIIQR 4 2 0.20099 12660 0 0 34827 0 0 12227 0 0 34704 0 0 15792 0 0 10753 0 0 14445 0 0 21967 0 0 34644 0 0 9729.6 0 0 11978 0 0 32899 0 0 12378 0 0 35256 0 0 15815 0 0 12006 0 0 15321 0 0 21893 0 0 33326 0 0 9670 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 94177000 94177000 0 0 NaN 1994 1147 68 68 2910 3084 3304 3663 3304 3663 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11650 3304 3663 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11650 3304 3663 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11650 Q53F19 25 Q53F19 Q53F19 Uncharacterized protein C17orf85 C17orf85 sp|Q53F19|CQ085_HUMAN Uncharacterized protein C17orf85 OS=Homo sapiens GN=C17orf85 PE=1 SV=2 0.999492 32.9411 7.80556E-09 151.89 142.08 151.89 1 S SVKAEAPAGPALGLPSPEAESGVDRGEPEPM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M) XXXPPPPPPPPPPPPPPPPPPPPPPPPPPPP AEAPAGPALGLPS(0.999)PEAES(0.001)GVDRGEPEPMEVEEGELEIVPVR AEAPAGPALGLPS(32.94)PEAES(-32.94)GVDRGEPEPMEVEEGELEIVPVR 13 4 -0.11153 1713 0 0 1738.7 0 0 1489.6 0 0 1416.3 0 0 1669.6 0 0 1603.4 0 0 1510.3 0 0 1723.7 0 0 1646.8 0 0 25423 0 0 1620.1 0 0 1640.7 0 0 1514.7 0 0 1476.9 0 0 1681.6 0 0 1648.2 0 0 1548.7 0 0 2490.4 0 0 1619.1 0 0 23978 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10982000 10982000 0 0 NaN 1995 1148 25 25 128 134 144 159 144 159 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21801 144 159 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21801 144 159 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21801 Q53F19 415 Q53F19 Q53F19 Uncharacterized protein C17orf85 C17orf85 sp|Q53F19|CQ085_HUMAN Uncharacterized protein C17orf85 OS=Homo sapiens GN=C17orf85 PE=1 SV=2 0.85667 8.23043 0.00147338 103.87 74.105 103.87 1 S DEMDYDLELKMISTPSPKKSMKMTMYADEVE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX MIS(0.015)T(0.129)PS(0.857)PK MIS(-17.69)T(-8.23)PS(8.23)PK 6 2 0.32878 48624 0 0 44878 0 0 50582 0 0 45170 0 0 27232 0 0 48718 0 0 31363 0 0 42913 0 0 48236 0 0 15725 0 0 46018 0 0 42396 0 0 50542 0 0 46418 0 0 29088 0 0 48631 0 0 32188 0 0 43744 0 0 46879 0 0 15800 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 69310000 69310000 0 0 NaN 1996 1148 415 415 2709;2710 2874;2875 3083;3084 3430;3431 3083 3430 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13970 3083 3430 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13970 3083 3430 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13970 Q53F19 500 Q53F19 Q53F19 Uncharacterized protein C17orf85 C17orf85 sp|Q53F19|CQ085_HUMAN Uncharacterized protein C17orf85 OS=Homo sapiens GN=C17orf85 PE=1 SV=2 1 136.958 0.000113125 136.96 68.588 136.96 1 S STKSDIRQRLGKRPHSPEKAFSSNPVVRREP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX RPHS(1)PEK RPHS(136.96)PEK 4 3 -0.13312 39146 0 0 36545 0 0 39148 0 0 35781 0 0 24742 0 0 39972 0 0 25253 0 0 35159 0 0 38530 0 0 2757.5 0 0 37043 0 0 34519 0 0 39244 0 0 36853 0 0 25978 0 0 39823 0 0 26044 0 0 35537 0 0 37454 0 0 3410.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 144240000 144240000 0 0 NaN 1997 1148 500 500 3387 3596 3836 4259 3836 4259 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5321 3836 4259 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5321 3836 4259 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5321 Q53GL7 431 Q53GL7 Q53GL7 Poly [ADP-ribose] polymerase 10 PARP10 sp|Q53GL7|PAR10_HUMAN Poly [ADP-ribose] polymerase 10 OS=Homo sapiens GN=PARP10 PE=1 SV=2 1 97.439 0.0024424 97.439 74.859 97.439 1 S PMEITMGSLEKAGPVSPGCVKLAGQEGLVEM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX AGPVS(1)PGCVK AGPVS(97.44)PGCVK 5 2 0.62641 31806 0 0 9844.2 0 0 30939 0 0 10496 0 0 15890 0 0 32340 0 0 15973 0 0 18244 0 0 10490 0 0 14996 0 0 30094 0 0 9303.2 0 0 31020 0 0 11088 0 0 17010 0 0 31292 0 0 16105 0 0 19298 0 0 10583 0 0 14543 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13657000 13657000 0 0 NaN 1998 1149 431 431 220 234 252 280 252 280 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12088 252 280 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12088 252 280 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12088 Q53GS9 46 Q53GS9 Q53GS9 U4/U6.U5 tri-snRNP-associated protein 2 USP39 sp|Q53GS9|SNUT2_HUMAN U4/U6.U5 tri-snRNP-associated protein 2 OS=Homo sapiens GN=USP39 PE=1 SV=2 0.999962 44.2025 9.46112E-11 188.66 151.65 188.66 1 S ERDREREPEAASSRGSPVRVKREFEPASARE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX EPEAASSRGS(1)PVR EPEAAS(-73.28)S(-44.2)RGS(44.2)PVR 10 3 0.29884 16512 0 0 23123 0 0 17242 0 0 19650 0 0 19617 0 0 17359 0 0 22405 0 0 20520 0 0 21564 0 0 11024 0 0 15627 0 0 21824 0 0 17354 0 0 20351 0 0 19806 0 0 17562 0 0 22650 0 0 20793 0 0 21313 0 0 10635 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 1 0 0 138100000 138100000 0 0 NaN 1999 1150 46 46 1085;1115 1143;1174 1231;1263 1354;1389 1231 1354 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5960 1231 1354 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5960 1231 1354 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5960 Q53H47 508 Q53H47 Q53H47 Histone-lysine N-methyltransferase SETMAR;Histone-lysine N-methyltransferase;Transposon Hsmar1 transposase SETMAR sp|Q53H47|SETMR_HUMAN Histone-lysine N-methyltransferase SETMAR OS=Homo sapiens GN=SETMAR PE=1 SV=2 1 133.781 2.03408E-05 133.78 116.7 133.78 1 S VTCDEKWILYDNRRRSAQWLDQEEAPKHFPK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(1)AQWLDQEEAPK S(133.78)AQWLDQEEAPK 1 3 -0.24551 6702 0 0 7949.3 0 0 8062.2 0 0 9686.3 0 0 8242.7 0 0 7463.2 0 0 8832.3 0 0 9259.1 0 0 9728.3 0 0 6579.2 0 0 6346.9 0 0 7519.3 0 0 8043.3 0 0 9803.9 0 0 8363.3 0 0 7614.9 0 0 8986.7 0 0 9416.2 0 0 9560.9 0 0 6409.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12875000 12875000 0 0 NaN 2000 1152 508 508 3597 3824 4077 4533 4077 4533 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16485 4077 4533 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16485 4077 4533 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16485 Q53HC0 209 Q53HC0 Q53HC0 Coiled-coil domain-containing protein 92 CCDC92 sp|Q53HC0|CCD92_HUMAN Coiled-coil domain-containing protein 92 OS=Homo sapiens GN=CCDC92 PE=1 SV=2 0.541738 0.726753 0.00779676 80.238 60.684 80.238 1 S PKDKLPETPRRRMKKSLSAPLHPEFEEVYRF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPX S(0.542)LS(0.458)APLHPEFEEVYR S(0.73)LS(-0.73)APLHPEFEEVY(-68.72)R 1 3 0.24139 4641.2 0 0 7375.5 0 0 4574.4 0 0 7482.8 0 0 6094.1 0 0 4785.9 0 0 6013 0 0 7114.9 0 0 7521.4 0 0 8013.6 0 0 4391.5 0 0 6968 0 0 4628.4 0 0 7633.2 0 0 6094.8 0 0 4961.8 0 0 6165.9 0 0 7287.9 0 0 7357.3 0 0 7710.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6420600 6420600 0 0 NaN 2001 1153 209 209 3977 4237 4521 5024 4521 5024 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19179 4521 5024 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19179 4521 5024 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19179 Q53HL2 219 Q53HL2 Q53HL2 Borealin CDCA8 sp|Q53HL2|BOREA_HUMAN Borealin OS=Homo sapiens GN=CDCA8 PE=1 SV=2 0.999984 47.9769 6.4535E-07 146.15 111.45 146.15 1 S TPAAGERIYNISGNGSPLADSKEIFLTVPVG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPXXXXXXXXX IYNISGNGS(1)PLADSK IY(-79.35)NIS(-47.98)GNGS(47.98)PLADS(-80.93)K 9 3 0.54194 7731.6 0 0 12214 0 0 7272.5 0 0 11319 0 0 6833.6 0 0 7439.9 0 0 6695.7 0 0 9350.6 0 0 12600 0 0 12444 0 0 7314.3 0 0 11533 0 0 7343.7 0 0 11615 0 0 6964.3 0 0 7678 0 0 6984 0 0 9680.3 0 0 12182 0 0 11934 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23524000 23524000 0 0 NaN 2002 1154 219 219 1986 2100 2264 2529 2264 2529 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17681 2264 2529 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17681 2264 2529 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17681 Q53HL2 154 Q53HL2 Q53HL2 Borealin CDCA8 sp|Q53HL2|BOREA_HUMAN Borealin OS=Homo sapiens GN=CDCA8 PE=1 SV=2 0.966342 14.5804 0.0219832 67.704 32.901 67.704 1 S TARVKRCPPSKKRTQSIQGKGKGKRSSRANT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX T(0.034)QS(0.966)IQGK T(-14.58)QS(14.58)IQGK 3 2 1.7985 26590 0 0 22681 0 0 28576 0 0 22108 0 0 21009 0 0 27931 0 0 21299 0 0 26189 0 0 25330 0 0 5777.9 0 0 25168 0 0 21423 0 0 28568 0 0 22829 0 0 21775 0 0 27726 0 0 21777 0 0 26511 0 0 24822 0 0 6046.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11663000 11663000 0 0 NaN 2003 1154 154 154 4883 5208 5548 6166 5548 6166 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8559 5548 6166 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8559 5548 6166 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8559 Q53QZ3 64 Q53QZ3 Q53QZ3 Rho GTPase-activating protein 15 ARHGAP15 sp|Q53QZ3|RHG15_HUMAN Rho GTPase-activating protein 15 OS=Homo sapiens GN=ARHGAP15 PE=1 SV=2 1 69.8636 0.0113068 69.864 23.258 69.864 1 S VGKVTEPISRHRRNHSQHILKDVIPPLEQLM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX NHS(1)QHILK NHS(69.86)QHILK 3 3 0.29789 80229 0 0 34142 0 0 78808 0 0 36697 0 0 44083 0 0 76152 0 0 47189 0 0 52314 0 0 32789 0 0 5646.8 0 0 75912 0 0 32268 0 0 79018 0 0 38158 0 0 46816 0 0 74282 0 0 47491 0 0 53569 0 0 32963 0 0 6527.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 123640000 123640000 0 0 NaN 2004 1155 64 64 2825 2995 3208 3561 3208 3561 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7765 3208 3561 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7765 3208 3561 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7765 Q53QZ3 212 Q53QZ3 Q53QZ3 Rho GTPase-activating protein 15 ARHGAP15 sp|Q53QZ3|RHG15_HUMAN Rho GTPase-activating protein 15 OS=Homo sapiens GN=ARHGAP15 PE=1 SV=2 0.96014 14.6531 4.95001E-43 360.83 315.61 360.83 1 S CPSRNLELFKIQRSSSTELLSHYDSDIKEQK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX S(0.001)S(0.033)S(0.96)T(0.006)ELLSHYDSDIK S(-32.11)S(-14.65)S(14.65)T(-21.77)ELLS(-89.02)HY(-222.62)DS(-193.45)DIK 3 3 0.072735 30622 0 0 4785.7 0 0 30432 0 0 5478.4 0 0 33425 0 0 42994 0 0 62772 0 0 39647 0 0 3604.6 0 0 10966 0 0 28975 0 0 4524.9 0 0 30746 0 0 6185.6 0 0 34102 0 0 41400 0 0 60867 0 0 40229 0 0 6066.1 0 0 11244 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 87971000 87971000 0 0 NaN 2005 1155 212 212 4472 4763 5069 5625 5069 5625 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16532 5069 5625 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16532 5069 5625 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16532 Q53T59 254 Q53T59 Q53T59 HCLS1-binding protein 3 HS1BP3 sp|Q53T59|H1BP3_HUMAN HCLS1-binding protein 3 OS=Homo sapiens GN=HS1BP3 PE=1 SV=1 0.53894 0.678032 0.00835025 78.95 57.58 78.95 1 S EGLFGPGRKLSPQDPSEDVSSVDPLKLFDDP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPXXXXX KLS(0.461)PQDPS(0.539)EDVSSVDPLK KLS(-0.68)PQDPS(0.68)EDVS(-47.15)S(-46.56)VDPLK 8 4 -1.0141 5726.9 0 0 4741.2 0 0 5936.8 0 0 4074.3 0 0 6659.4 0 0 6957.7 0 0 6292.3 0 0 4983.4 0 0 4904 0 0 6403.7 0 0 5419.9 0 0 4475.1 0 0 5974.1 0 0 4270.4 0 0 6708.8 0 0 6832.7 0 0 6384.6 0 0 5268.2 0 0 4897.6 0 0 6145.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10250000 10250000 0 0 NaN 2006 1156 254 254 2130 2251 2424 2701 2424 2701 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17960 2424 2701 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17960 2424 2701 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17960 Q56NI9 75 Q56NI9 Q56NI9 N-acetyltransferase ESCO2 ESCO2 sp|Q56NI9|ESCO2_HUMAN N-acetyltransferase ESCO2 OS=Homo sapiens GN=ESCO2 PE=1 SV=1 0.999996 53.6444 0.000158095 105.19 87.604 105.19 1 S LKTTEINRLPSANQGSPFKSALSTVSFYNQN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX LPSANQGS(1)PFK LPS(-53.64)ANQGS(53.64)PFK 8 3 -1.2823 8828.1 0 0 6861.3 0 0 10744 0 0 6221.1 0 0 3933.5 0 0 9097.1 0 0 4706.6 0 0 7609.2 0 0 6102.4 0 0 2522.1 0 0 8360.8 0 0 6478 0 0 10626 0 0 6472.9 0 0 4406.1 0 0 8976.2 0 0 4792 0 0 7766.3 0 0 5962.1 0 0 2551 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16038000 16038000 0 0 NaN 2007 1157 75 75 2506 2647 2842 3170 2842 3170 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15830 2842 3170 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15830 2842 3170 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15830 Q5BKX6 348 Q5BKX6 Q5BKX6 Solute carrier family 45 member 4 SLC45A4 sp|Q5BKX6|S45A4_HUMAN Solute carrier family 45 member 4 OS=Homo sapiens GN=SLC45A4 PE=1 SV=2 0.998363 28.4293 1.98404E-05 154.15 113.82 154.15 1 S SIFHDASYPATPRSTSQELAKTKLPRLATFL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX ST(0.001)S(0.998)QELAK S(-36.9)T(-28.43)S(28.43)QELAK 3 2 0.42017 32609 0 0 31245 0 0 33732 0 0 31831 0 0 23824 0 0 32970 0 0 22718 0 0 29983 0 0 34333 0 0 6891.7 0 0 30861 0 0 29520 0 0 33779 0 0 32666 0 0 24757 0 0 32972 0 0 23497 0 0 30399 0 0 33383 0 0 7183.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18279000 18279000 0 0 NaN 2008 1159 348 348 4530 4829 5144 5712 5144 5712 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10192 5144 5712 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10192 5144 5712 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10192 Q5BKZ1 270 Q5BKZ1 Q5BKZ1 DBIRD complex subunit ZNF326 ZNF326 sp|Q5BKZ1|ZN326_HUMAN DBIRD complex subunit ZNF326 OS=Homo sapiens GN=ZNF326 PE=1 SV=2 0.930417 13.019 0.0145201 61.532 34.874 61.532 1 S KPKLAKPMEKISLSKSPTKTDPKNEEEEKRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX IS(0.001)LS(0.022)KS(0.93)PT(0.046)K IS(-31.2)LS(-16.17)KS(13.02)PT(-13.02)K 6 3 -0.045432 7131.9 0 0 27860 0 0 7325.9 0 0 27494 0 0 24570 0 0 8023.3 0 0 26624 0 0 20013 0 0 27589 0 0 4689.5 0 0 6749.3 0 0 26316 0 0 7580.6 0 0 27940 0 0 23946 0 0 9070.4 0 0 27028 0 0 19751 0 0 27181 0 0 4878.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 274010000 274010000 0 0 NaN 2009 1160 270 270 1943 2053 2215 2476 2215 2476 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14213 2215 2476 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14213 2215 2476 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14213 Q5FBB7 256 Q5FBB7 Q5FBB7 Shugoshin-like 1 SGOL1 sp|Q5FBB7|SGOL1_HUMAN Shugoshin-like 1 OS=Homo sapiens GN=SGOL1 PE=1 SV=1 1 85.845 0.00604718 85.845 55.64 85.845 1 S VQHNACQWSKDQVNLSPKLIQPGTFTKTKED X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPXXXXXXXXXXXXX DQVNLS(1)PK DQVNLS(85.84)PK 6 3 -0.80218 9349.2 0 0 12677 0 0 11020 0 0 12920 0 0 7823.2 0 0 11141 0 0 8041.3 0 0 9088.7 0 0 12568 0 0 2667.2 0 0 8853 0 0 11977 0 0 10962 0 0 13222 0 0 8135.1 0 0 11226 0 0 8298.8 0 0 9276.6 0 0 12209 0 0 2721.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16679000 16679000 0 0 NaN 2010 1161 256 256 783 831 887 978 887 978 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12313 887 978 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12313 887 978 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12313 Q5H9B9;Q9NSY1 229;979 Q5H9B9 Q5H9B9 Putative BMP-2-inducible kinase-like protein;BMP-2-inducible protein kinase BMP2KL;BMP2K sp|Q5H9B9|BM2KL_HUMAN Putative BMP-2-inducible kinase-like protein OS=Homo sapiens GN=BMP2KL PE=5 SV=2;sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2 0.776652 5.43264 0.036971 44.612 20.54 44.612 1 S GSQQQKVKQRSLQKLSSRQRRTKQDMSKSNG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPXXXXXXXXXXXXX S(0.001)LQKLS(0.777)S(0.222)R S(-28.75)LQKLS(5.43)S(-5.43)R 6 3 -0.41592 11110 0 0 30350 0 0 10491 0 0 31590 0 0 12575 0 0 10715 0 0 13014 0 0 19667 0 0 31814 0 0 1456 0 0 10511 0 0 28678 0 0 10626 0 0 32024 0 0 12662 0 0 11787 0 0 13741 0 0 19424 0 0 30594 0 0 1826.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20603000 20603000 0 0 NaN 2011 1162 229 229 3971 4231 4515 5018 4515 5018 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10141 4515 5018 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10141 4515 5018 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10141 Q5H9R7 524 Q5H9R7 Q5H9R7 Serine/threonine-protein phosphatase 6 regulatory subunit 3 PPP6R3 sp|Q5H9R7|PP6R3_HUMAN Serine/threonine-protein phosphatase 6 regulatory subunit 3 OS=Homo sapiens GN=PPP6R3 PE=1 SV=2 0.493508 0 6.31656E-12 189.86 156.51 189.86 S KRNTVDLVTTCHIHSSSDDEIDFKETGFSQD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPPPPXXXXXXX NTVDLVTTCHIHS(0.013)S(0.494)S(0.494)DDEIDFK NT(-93.52)VDLVT(-52.83)T(-44.52)CHIHS(-15.81)S(0)S(0)DDEIDFK 14 4 -0.11466 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2012 1163 524 524 2951 3130 3351 3716 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17452 3351 3716 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17452 3351 3716 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17452 Q5H9R7 525 Q5H9R7 Q5H9R7 Serine/threonine-protein phosphatase 6 regulatory subunit 3 PPP6R3 sp|Q5H9R7|PP6R3_HUMAN Serine/threonine-protein phosphatase 6 regulatory subunit 3 OS=Homo sapiens GN=PPP6R3 PE=1 SV=2 0.493508 0 6.31656E-12 189.86 156.51 189.86 S RNTVDLVTTCHIHSSSDDEIDFKETGFSQDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NTVDLVTTCHIHS(0.013)S(0.494)S(0.494)DDEIDFK NT(-93.52)VDLVT(-52.83)T(-44.52)CHIHS(-15.81)S(0)S(0)DDEIDFK 15 4 -0.11466 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2013 1163 525 525 2951 3130 3351 3716 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17452 3351 3716 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17452 3351 3716 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17452 Q5HYJ3 193 Q5HYJ3 Q5HYJ3 Protein FAM76B FAM76B sp|Q5HYJ3|FA76B_HUMAN Protein FAM76B OS=Homo sapiens GN=FAM76B PE=1 SV=3 0.999948 42.8214 1.9432E-10 187 154.94 187 1 S HHHRHSSSHHKISNLSPEEEQGLWKQSHKSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPXXXXXX ISNLS(1)PEEEQGLWK IS(-42.82)NLS(42.82)PEEEQGLWK 5 2 1.6384 22399 0 0 18428 0 0 23660 0 0 19554 0 0 21784 0 0 22237 0 0 22202 0 0 22300 0 0 19312 0 0 50255 0 0 21200 0 0 17415 0 0 23729 0 0 20051 0 0 22220 0 0 22265 0 0 22501 0 0 23880 0 0 19178 0 0 47838 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 67796000 67796000 0 0 NaN 2014 1164 193 193 1945 2056 2218;2219 2479;2480 2219 2480 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20887 2219 2480 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20887 2218 2479 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20835 Q5J8M3 36 Q5J8M3 Q5J8M3 ER membrane protein complex subunit 4 EMC4 sp|Q5J8M3|EMC4_HUMAN ER membrane protein complex subunit 4 OS=Homo sapiens GN=EMC4 PE=1 SV=2 0.830435 7.18211 3.96498E-05 117.21 94.556 117.21 1 S LSGPGGGSRGRSDRGSGQGDSLYPVGYLDKQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPX S(0.159)DRGS(0.83)GQGDS(0.011)LYPVGYLDK S(-7.18)DRGS(7.18)GQGDS(-18.91)LY(-59.71)PVGY(-86.78)LDK 5 3 -0.81791 8829.8 0 0 7013.8 0 0 10562 0 0 8178 0 0 6512.8 0 0 9570.6 0 0 7276.9 0 0 8220.6 0 0 7559.9 0 0 16177 0 0 8361.7 0 0 6632.3 0 0 10487 0 0 8348.2 0 0 6859.3 0 0 9544.5 0 0 7378.3 0 0 8785.6 0 0 7447.3 0 0 15423 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8375300 8375300 0 0 NaN 2015 1165 36 36 3670 3905 4165 4631 4165 4631 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18340 4165 4631 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18340 4165 4631 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18340 Q5JRA6 1906 Q5JRA6 Q5JRA6 Melanoma inhibitory activity protein 3 MIA3 sp|Q5JRA6|MIA3_HUMAN Melanoma inhibitory activity protein 3 OS=Homo sapiens GN=MIA3 PE=1 SV=1 0.999999 62.8894 7.46737E-12 185.55 171.39 185.55 1 S ASQSTSQDCSQALKQSP______________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPXXXXXXXXXXXXXX DLLPSGSRDEPPPASQSTSQDCSQALKQS(1)P DLLPS(-160.68)GS(-160.68)RDEPPPAS(-132.62)QS(-115.78)T(-106.53)S(-97.82)QDCS(-62.89)QALKQS(62.89)P 29 4 -0.22613 4339.5 0 0 5926.1 0 0 4777.3 0 0 5890.7 0 0 4372.5 0 0 4667.7 0 0 5037.3 0 0 6126.7 0 0 7243.7 0 0 23257 0 0 4107.9 0 0 5598 0 0 4781.6 0 0 6030.9 0 0 4472.6 0 0 4795.4 0 0 5156 0 0 6789.8 0 0 7053.7 0 0 22041 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19019000 19019000 0 0 NaN 2016 1166 1906 1906 740 784 835 922 835 922 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14573 835 922 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14573 835 922 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14573 Q5JSH3 162 Q5JSH3 Q5JSH3 WD repeat-containing protein 44 WDR44 sp|Q5JSH3|WDR44_HUMAN WD repeat-containing protein 44 OS=Homo sapiens GN=WDR44 PE=1 SV=1 0.644469 5.26649 2.43301E-05 124.17 101.73 124.17 1 S CEKPVDETTKLTQTSSTEQLNVLETETEVLN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP LT(0.003)QT(0.037)S(0.124)S(0.644)T(0.192)EQLNVLETETEVLNK LT(-23.47)QT(-12.36)S(-7.17)S(5.27)T(-5.27)EQLNVLET(-89.37)ET(-95.05)EVLNK 6 4 0.12175 6983.6 0 0 8196.9 0 0 7009 0 0 7929.8 0 0 7151 0 0 5958.9 0 0 8376.8 0 0 8990.1 0 0 7783.9 0 0 40807 0 0 6608.4 0 0 7741.8 0 0 7060.3 0 0 8126.7 0 0 7265.2 0 0 6175.8 0 0 8451.8 0 0 10130 0 0 7705.5 0 0 38633 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 60606000 60606000 0 0 NaN 2017 1167 162 162 2634 2781 2982 3319 2982 3319 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23331 2982 3319 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23331 2982 3319 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23331 Q5JSH3 262 Q5JSH3 Q5JSH3 WD repeat-containing protein 44 WDR44 sp|Q5JSH3|WDR44_HUMAN WD repeat-containing protein 44 OS=Homo sapiens GN=WDR44 PE=1 SV=1 1 75.2308 0.00583131 90.385 62.742 90.385 1 S PPPPSRPAPPPRKRKSELEFETLKTPDIDVP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX RKS(1)ELEFETLK RKS(75.23)ELEFET(-75.23)LK 3 3 -0.27082 13870 0 0 14472 0 0 13607 0 0 14140 0 0 13432 0 0 11871 0 0 12766 0 0 14438 0 0 17311 0 0 9288.8 0 0 13124 0 0 13669 0 0 13714 0 0 14503 0 0 13636 0 0 12050 0 0 13151 0 0 14663 0 0 16888 0 0 9080.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6768500 6768500 0 0 NaN 2018 1167 262 262 3299 3500 3737 4151 3737 4151 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16211 3737 4151 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16211 3737 4151 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16211 Q5JSH3 342 Q5JSH3 Q5JSH3 WD repeat-containing protein 44 WDR44 sp|Q5JSH3|WDR44_HUMAN WD repeat-containing protein 44 OS=Homo sapiens GN=WDR44 PE=1 SV=1 0.650832 2.7134 1.34954E-16 244.01 211.08 244.01 1 S GQTVAGEVMGPQRPRSNSGRELTDEEILASV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.651)NS(0.348)GRELT(0.001)DEEILASVMIK S(2.71)NS(-2.71)GRELT(-29.52)DEEILAS(-150.42)VMIK 1 4 0.13969 14609 0 0 27901 0 0 15733 0 0 26935 0 0 23618 0 0 15091 0 0 22094 0 0 25185 0 0 29311 0 0 16359 0 0 13828 0 0 26351 0 0 15872 0 0 27525 0 0 23487 0 0 15812 0 0 22760 0 0 25364 0 0 28615 0 0 15987 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 101530000 101530000 0 0 NaN 2019 1167 342 342 4058 4327;4328 4617 5127 4617 5127 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23371 4617 5127 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23371 4617 5127 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23371 Q5JSH3 344 Q5JSH3 Q5JSH3 WD repeat-containing protein 44 WDR44 sp|Q5JSH3|WDR44_HUMAN WD repeat-containing protein 44 OS=Homo sapiens GN=WDR44 PE=1 SV=1 0.441153 0 0.00112847 99.135 78.767 99.135 S TVAGEVMGPQRPRSNSGRELTDEEILASVMI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.441)NS(0.441)GRELT(0.118)DEEILASVMIK S(0)NS(0)GRELT(-5.74)DEEILAS(-59.9)VMIK 3 4 -1.1443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2020 1167 344 344 4058 4327;4328 4616 5126 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21361 4616 5126 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21361 4616 5126 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21361 Q5JSH3 50 Q5JSH3 Q5JSH3 WD repeat-containing protein 44 WDR44 sp|Q5JSH3|WDR44_HUMAN WD repeat-containing protein 44 OS=Homo sapiens GN=WDR44 PE=1 SV=1 1 209.844 6.12896E-11 209.84 144.69 209.84 1 S TFKETENTAYKVGNESPVQELKQDVSKKIIE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX VGNES(1)PVQELK VGNES(209.84)PVQELK 5 2 0.45041 67774 0 0 121870 0 0 62120 0 0 113370 0 0 80123 0 0 56114 0 0 86702 0 0 79866 0 0 125820 0 0 17638 0 0 64111 0 0 115070 0 0 63110 0 0 116000 0 0 80376 0 0 59133 0 0 89011 0 0 79722 0 0 122490 0 0 18456 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 119010000 119010000 0 0 NaN 2021 1167 50 50 5117 5454 5809 6460 5809 6460 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14771 5809 6460 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14771 5809 6460 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14771 Q5JSH3 561 Q5JSH3 Q5JSH3 WD repeat-containing protein 44 WDR44 sp|Q5JSH3|WDR44_HUMAN WD repeat-containing protein 44 OS=Homo sapiens GN=WDR44 PE=1 SV=1 0.995108 23.7896 1.76184E-08 171.94 148.55 171.94 1 S YFNNMRMKYNTEGRVSPSPSQESLSSSKSDT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPXXX YNTEGRVS(0.995)PS(0.004)PS(0.001)QESLSSSK Y(-86.76)NT(-42.54)EGRVS(23.79)PS(-23.79)PS(-31.68)QES(-56.6)LS(-86.22)S(-87.83)S(-94.97)K 8 3 -0.44478 12023 0 0 20850 0 0 14995 0 0 19965 0 0 23260 0 0 13461 0 0 28791 0 0 21406 0 0 22242 0 0 11617 0 0 11388 0 0 19691 0 0 15040 0 0 20449 0 0 23188 0 0 13905 0 0 28862 0 0 21514 0 0 22224 0 0 11434 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25889000 25889000 0 0 NaN 2022 1167 561 561 5407 5759 6146 6833 6146 6833 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11312 6146 6833 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11312 6146 6833 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11312 Q5JSL3 440 Q5JSL3 Q5JSL3 Dedicator of cytokinesis protein 11 DOCK11 sp|Q5JSL3|DOC11_HUMAN Dedicator of cytokinesis protein 11 OS=Homo sapiens GN=DOCK11 PE=1 SV=2 0.999842 38.0256 1.31154E-07 164.94 140.05 164.94 1 S REMLWGSSTQLASDGSPKGSSPESYIHGIAE X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX EMLWGSSTQLASDGS(1)PK EMLWGS(-80.44)S(-71.67)T(-62.61)QLAS(-38.03)DGS(38.03)PK 15 3 0.67959 19571 0 0 27509 0 0 20782 0 0 27220 0 0 26326 0 0 21981 0 0 28872 0 0 28659 0 0 29371 0 0 45367 0 0 18524 0 0 25985 0 0 20929 0 0 27882 0 0 26425 0 0 22435 0 0 29281 0 0 29855 0 0 28960 0 0 43382 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 43558000 43558000 0 0 NaN 2023 1168 440 440 1064 1121;1122 1209;1210 1329;1330;1331 1209 1329 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17542 1209 1329 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17542 1209 1329 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17542 Q5JSZ5 613 Q5JSZ5 Q5JSZ5 Protein PRRC2B PRRC2B sp|Q5JSZ5|PRC2B_HUMAN Protein PRRC2B OS=Homo sapiens GN=PRRC2B PE=1 SV=2 1 119.79 0.000229561 119.79 96.067 119.79 1 S VAQSNSSEEEAREAGSPAQEFKYQKSLPPRF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX EAGS(1)PAQEFK EAGS(119.79)PAQEFK 4 2 -0.11258 18962 0 0 26265 0 0 18784 0 0 25732 0 0 15396 0 0 19782 0 0 15926 0 0 20500 0 0 30733 0 0 14811 0 0 17942 0 0 24809 0 0 18884 0 0 26358 0 0 15845 0 0 20131 0 0 16591 0 0 20981 0 0 29696 0 0 14421 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16258000 16258000 0 0 NaN 2024 1169 613 613 871 924 1001 1107 1001 1107 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12737 1001 1107 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12737 1001 1107 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12737 Q5JTD0 300 Q5JTD0 Q5JTD0 Tight junction-associated protein 1 TJAP1 sp|Q5JTD0|TJAP1_HUMAN Tight junction-associated protein 1 OS=Homo sapiens GN=TJAP1 PE=1 SV=1 1 103.5 0.000176957 103.5 85.7 103.5 1 S PQPNGECHSLGTARGSPEEELPLPAFEKLNP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPXXX GS(1)PEEELPLPAFEK GS(103.5)PEEELPLPAFEK 2 3 0.017891 5359 0 0 2679.6 0 0 5154.6 0 0 3498.9 0 0 4505.3 0 0 5798.5 0 0 4326.4 0 0 4243.3 0 0 3747.7 0 0 7292 0 0 5070.2 0 0 2536 0 0 5193.9 0 0 3579.6 0 0 4607.3 0 0 5703.8 0 0 4396.7 0 0 4536.3 0 0 3722.4 0 0 6964.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25190000 25190000 0 0 NaN 2025 1170 300 300 1619 1705 1842 2049 1842 2049 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22573 1842 2049 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22573 1842 2049 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22573 Q5JTD0 545 Q5JTD0 Q5JTD0 Tight junction-associated protein 1 TJAP1 sp|Q5JTD0|TJAP1_HUMAN Tight junction-associated protein 1 OS=Homo sapiens GN=TJAP1 PE=1 SV=1 0.970597 15.1865 2.0016E-10 192.85 163.98 192.85 1 S RSPKRMGVHHLHRKDSLTQAQEQGNLLN___ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX KDS(0.971)LT(0.029)QAQEQGNLLN KDS(15.19)LT(-15.19)QAQEQGNLLN 3 2 0.50128 10119 0 0 4099.6 0 0 9190.1 0 0 5516.5 0 0 7576.2 0 0 10403 0 0 7206.7 0 0 7245.9 0 0 4815.3 0 0 11599 0 0 9571.3 0 0 3880.8 0 0 9286.8 0 0 5656.2 0 0 7776.2 0 0 10191 0 0 7288.1 0 0 7740 0 0 4852.7 0 0 11089 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16541000 16541000 0 0 NaN 2026 1170 545 545 2034 2152 2319 2586 2319 2586 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15036 2319 2586 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15036 2319 2586 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15036 Q5JTH9 1284 Q5JTH9 Q5JTH9 RRP12-like protein RRP12 sp|Q5JTH9|RRP12_HUMAN RRP12-like protein OS=Homo sapiens GN=RRP12 PE=1 SV=2 1 97.439 0.00258411 97.439 67.185 97.439 1 S LQGQFKGLVKAARRGSQVGHKNRRKDRRP__ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX RGS(1)QVGHK RGS(97.44)QVGHK 3 3 -0.32752 12179 0 0 12933 0 0 10344 0 0 11093 0 0 10474 0 0 10608 0 0 10557 0 0 13070 0 0 12838 0 0 2523.2 0 0 11518 0 0 12207 0 0 10523 0 0 11494 0 0 10625 0 0 10690 0 0 10804 0 0 13091 0 0 12571 0 0 2678.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18102000 18102000 0 0 NaN 2027 1171 1284 1284 3258 3456 3692 4096 3692 4096 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5279 3692 4096 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5279 3692 4096 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5279 Q5JTV8 157 Q5JTV8 Q5JTV8 Torsin-1A-interacting protein 1 TOR1AIP1 sp|Q5JTV8|TOIP1_HUMAN Torsin-1A-interacting protein 1 OS=Homo sapiens GN=TOR1AIP1 PE=1 SV=2 0.901091 10.1757 4.03315E-32 300.97 280.53 300.97 1 S PSPVMTRRGLRDSHSSEEDEASSQTDLSQTI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP DS(0.012)HS(0.087)S(0.901)EEDEASSQTDLSQTISK DS(-18.62)HS(-10.18)S(10.18)EEDEAS(-121.33)S(-150.61)QT(-190.91)DLS(-243.48)QT(-258.26)IS(-271.84)K 5 3 0.7439 7896.7 0 0 8295 0 0 8537.4 0 0 8059.1 0 0 8453.5 0 0 9242.2 0 0 8703.9 0 0 11244 0 0 9396.8 0 0 100940 0 0 7474.7 0 0 7834.7 0 0 8559.3 0 0 8308.3 0 0 8587.8 0 0 9426.3 0 0 8866.8 0 0 14242 0 0 9242.5 0 0 95308 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 24553000 24553000 0 0 NaN 2028 1172 157 157 809 857 913 1005;1006 913 1006 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12729 913 1006 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12729 913 1006 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12729 Q5JTV8 315 Q5JTV8 Q5JTV8 Torsin-1A-interacting protein 1 TOR1AIP1 sp|Q5JTV8|TOIP1_HUMAN Torsin-1A-interacting protein 1 OS=Homo sapiens GN=TOR1AIP1 PE=1 SV=2 0.999916 40.7583 7.50905E-16 229.31 185.81 229.31 1 S RMQNDSILKSELGNQSPSTSSRQVTGQPQNA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPXXXXXXXXX SELGNQS(1)PSTSSR S(-83.73)ELGNQS(40.76)PS(-40.76)T(-68.5)S(-98.02)S(-125.39)R 7 2 -0.76596 11512 0 0 11548 0 0 11732 0 0 9454.4 0 0 9703.6 0 0 11386 0 0 11241 0 0 11120 0 0 11453 0 0 2816.3 0 0 10894 0 0 10897 0 0 11779 0 0 9866.3 0 0 9988.9 0 0 11329 0 0 11374 0 0 11249 0 0 11292 0 0 2909.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13385000 13385000 0 0 NaN 2029 1172 315 315 3689 3924 4184 4650 4184 4650 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7054 4184 4650 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7054 4184 4650 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7054 Q5M775 55 Q5M775 Q5M775 Cytospin-B SPECC1 sp|Q5M775|CYTSB_HUMAN Cytospin-B OS=Homo sapiens GN=SPECC1 PE=1 SV=1 0.990104 20.0228 3.2404E-23 271.55 226.82 271.55 1 S SLAFESRLSRLKRASSEDTLNKPGSTAASGV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP AS(0.01)S(0.99)EDTLNKPGSTAASGVVR AS(-20.02)S(20.02)EDT(-43.26)LNKPGS(-121.65)T(-126.41)AAS(-179.16)GVVR 3 3 -0.13944 54468 0 0 11855 0 0 54249 0 0 11737 0 0 40691 0 0 57303 0 0 42222 0 0 39337 0 0 13250 0 0 26791 0 0 51540 0 0 11198 0 0 54475 0 0 12790 0 0 42088 0 0 55229 0 0 42112 0 0 40961 0 0 14302 0 0 26137 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 118570000 118570000 0 0 NaN 2030 1173 55 55 494 525 565 630 565 630 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11911 565 630 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11911 565 630 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11911 Q5M775 361 Q5M775 Q5M775 Cytospin-B SPECC1 sp|Q5M775|CYTSB_HUMAN Cytospin-B OS=Homo sapiens GN=SPECC1 PE=1 SV=1 0.827226 6.85208 2.72251E-12 204.23 180.51 204.23 1 S TSNPFKSSKCSTAGSSPNSVSELSLASLTEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPPPP CST(0.002)AGS(0.171)S(0.827)PNSVSELSLASLTEK CS(-33.66)T(-27.05)AGS(-6.85)S(6.85)PNS(-47.93)VS(-88.84)ELS(-138.34)LAS(-174.58)LT(-183.1)EK 7 3 0.21813 15200 0 0 5896 0 0 16980 0 0 6194.8 0 0 7010.7 0 0 17383 0 0 7483.8 0 0 12313 0 0 6630.7 0 0 83310 0 0 14390 0 0 5571.5 0 0 16875 0 0 6522.2 0 0 7709 0 0 17018 0 0 7571.8 0 0 15058 0 0 6578.7 0 0 78732 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21662000 21662000 0 0 NaN 2031 1173 361 361 623 664 708 784 708 784 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21726 708 784 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21726 708 784 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21726 Q5M775 315 Q5M775 Q5M775 Cytospin-B SPECC1 sp|Q5M775|CYTSB_HUMAN Cytospin-B OS=Homo sapiens GN=SPECC1 PE=1 SV=1 0.832259 10.3862 2.29792E-10 200.19 155.05 200.19 1 S YKKNIHGNALRTSGSSSSDVTKASLSPDASD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX TSGS(0.033)S(0.832)S(0.076)S(0.059)DVTK T(-55.03)S(-57.89)GS(-14.04)S(10.39)S(-10.39)S(-11.51)DVT(-51.26)K 5 2 0.081692 62574 0 0 21176 0 0 60647 0 0 22696 0 0 27980 0 0 60953 0 0 29720 0 0 38444 0 0 24451 0 0 4359.4 0 0 59203 0 0 20013 0 0 60782 0 0 23826 0 0 30343 0 0 59115 0 0 30024 0 0 39566 0 0 24349 0 0 4994.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27272000 27272000 0 0 NaN 2032 1173 315 315 4918 5243 5586 6208 5586 6208 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7594 5586 6208 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7594 5586 6208 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7594 Q5M775 810 Q5M775 Q5M775 Cytospin-B SPECC1 sp|Q5M775|CYTSB_HUMAN Cytospin-B OS=Homo sapiens GN=SPECC1 PE=1 SV=1 0.489613 0 0.000181371 113.52 83.539 113.52 S VDAAGRWPGVCVSRTSPTPPESATTVKSLIK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T(0.49)S(0.49)PT(0.021)PPESATTVK T(0)S(0)PT(-13.72)PPES(-72.77)AT(-83.08)T(-101.35)VK 2 3 -3.3784 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2033 1173 810 810 4946 5274 5617 6243 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10995 5617 6243 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10995 5617 6243 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10995 Q5PRF9 271 Q5PRF9 Q5PRF9 Protein Smaug homolog 2 SAMD4B sp|Q5PRF9|SMAG2_HUMAN Protein Smaug homolog 2 OS=Homo sapiens GN=SAMD4B PE=1 SV=1 0.99978 36.7985 3.40362E-35 314.57 302.21 314.57 1 S LGARAAFTTPDHAPLSPQSSVASSGSEQTEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPPPPPPPPP AAFTTPDHAPLS(1)PQSSVASSGSEQTEEQGSSR AAFT(-58.49)T(-50.06)PDHAPLS(36.8)PQS(-36.8)S(-68.58)VAS(-112.99)S(-147.69)GS(-178.8)EQT(-241.84)EEQGS(-268.74)S(-272.85)R 12 4 1.0404 5980.9 0 0 6471.2 0 0 6416.7 0 0 6462.2 0 0 6014.1 0 0 6291.6 0 0 7064.4 0 0 7292.7 0 0 7902.1 0 0 35564 0 0 5661.1 0 0 6113.1 0 0 6433.2 0 0 6633 0 0 6142.5 0 0 6393.5 0 0 7163.5 0 0 8347.9 0 0 7761.5 0 0 33656 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 76895000 76895000 0 0 NaN 2034 1174 271 271 30 32 35;36 45;46 36 46 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14039 36 46 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14039 36 46 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14039 Q5QJE6 117 Q5QJE6 Q5QJE6 Deoxynucleotidyltransferase terminal-interacting protein 2 DNTTIP2 sp|Q5QJE6|TDIF2_HUMAN Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Homo sapiens GN=DNTTIP2 PE=1 SV=2 0.997442 25.9209 5.74975E-11 204.48 160.76 204.48 1 S TILRVTRRRQILIACSPVSSVRKKPKVTPTK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPXXXXXXXXX QILIACS(0.997)PVS(0.003)SVR QILIACS(25.92)PVS(-25.92)S(-51.71)VR 7 2 0.17914 20647 0 0 28450 0 0 23296 0 0 27731 0 0 19259 0 0 23843 0 0 20012 0 0 24793 0 0 27457 0 0 20927 0 0 19547 0 0 26872 0 0 23258 0 0 28455 0 0 19800 0 0 24124 0 0 20538 0 0 25463 0 0 26776 0 0 20279 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 76501000 76501000 0 0 NaN 2035 1175 117 117 3048 3234 3460 3834 3460 3834 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17309 3460 3834 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17309 3460 3834 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17309 Q5R372 119 Q5R372 Q5R372 Rab GTPase-activating protein 1-like RABGAP1L sp|Q5R372|RBG1L_HUMAN Rab GTPase-activating protein 1-like OS=Homo sapiens GN=RABGAP1L PE=1 SV=1 0.518839 0.32756 0.0110554 71.314 58.114 71.314 1 S ILDPSNTEISTPRPSSPGGLPEEDSVLFNKL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX PS(0.481)S(0.519)PGGLPEEDSVLFNK PS(-0.33)S(0.33)PGGLPEEDS(-45.36)VLFNK 3 3 -0.66817 8271.8 0 0 5244.9 0 0 7686.8 0 0 6056.5 0 0 4693.7 0 0 7969.1 0 0 5383.9 0 0 8073 0 0 6471.3 0 0 42611 0 0 7825.1 0 0 4959.3 0 0 7738.5 0 0 6199.8 0 0 4950.7 0 0 7984 0 0 5477 0 0 9377.7 0 0 6339.1 0 0 40310 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8215600 8215600 0 0 NaN 2036 1176 119 119 2988 3167 3390 3760 3390 3760 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20725 3390 3760 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20725 3390 3760 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20725 Q5SNT2 466 Q5SNT2 Q5SNT2 Transmembrane protein 201 TMEM201 sp|Q5SNT2|TM201_HUMAN Transmembrane protein 201 OS=Homo sapiens GN=TMEM201 PE=1 SV=1 1 97.0412 1.96212E-11 205.02 188.88 205.02 1 S RALSLGTIPSLTRADSGYLFSGSRPPSQVSR X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP ADS(1)GYLFSGSRPPSQVSR ADS(97.04)GY(-97.04)LFS(-99.56)GS(-118.66)RPPS(-137.45)QVS(-152.93)R 3 3 -0.91924 10215 0 0 9672.6 0 0 11324 0 0 10114 0 0 9464.3 0 0 11722 0 0 10111 0 0 11415 0 0 9533.6 0 0 8255.1 0 0 9669.9 0 0 9139.9 0 0 11317 0 0 10384 0 0 9722.8 0 0 11690 0 0 10246 0 0 11710 0 0 9431.3 0 0 8037.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20480000 20480000 0 0 NaN 2037 1177 466 466 120 126 135 150 135 150 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14327 135 150 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14327 135 150 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14327 Q5SNT2 454 Q5SNT2 Q5SNT2 Transmembrane protein 201 TMEM201 sp|Q5SNT2|TM201_HUMAN Transmembrane protein 201 OS=Homo sapiens GN=TMEM201 PE=1 SV=1 0.99647 24.5068 5.58513E-07 145 97.44 82.578 1 S RTSPSSLPGRLSRALSLGTIPSLTRADSGYL X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX ALS(0.996)LGT(0.004)IPSLTR ALS(24.51)LGT(-24.51)IPS(-73.04)LT(-74.47)R 3 3 -0.51764 21695 0 0 14366 0 0 21741 0 0 13821 0 0 10721 0 0 21360 0 0 13836 0 0 17567 0 0 14291 0 0 44287 0 0 20529 0 0 13568 0 0 21761 0 0 14346 0 0 11575 0 0 21110 0 0 13947 0 0 19102 0 0 14081 0 0 42108 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 82440000 82440000 0 0 NaN 2038 1177 454 454 313 334 356;357 396;397 357 397 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22188 356 396 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22162 356 396 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22162 Q5SNT2 441 Q5SNT2 Q5SNT2 Transmembrane protein 201 TMEM201 sp|Q5SNT2|TM201_HUMAN Transmembrane protein 201 OS=Homo sapiens GN=TMEM201 PE=1 SV=1 0.896528 9.81897 0.0444532 54.823 38.58 54.823 1 S LPLANQQLFRSPRRTSPSSLPGRLSRALSLG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX RT(0.093)S(0.897)PS(0.007)S(0.003)LPGR RT(-9.82)S(9.82)PS(-21.23)S(-24.41)LPGR 3 2 0.34696 19538 0 0 14023 0 0 21114 0 0 13083 0 0 13864 0 0 21744 0 0 15002 0 0 17583 0 0 14637 0 0 4285.4 0 0 18494 0 0 13241 0 0 21084 0 0 13629 0 0 14513 0 0 21364 0 0 15206 0 0 17927 0 0 14457 0 0 4442.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15164000 15164000 0 0 NaN 2039 1177 441 441 3537 3754 4000 4440 4000 4440 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6857 4000 4440 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6857 4000 4440 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6857 Q5SRE5 1708 Q5SRE5 Q5SRE5 Nucleoporin NUP188 homolog NUP188 sp|Q5SRE5|NU188_HUMAN Nucleoporin NUP188 homolog OS=Homo sapiens GN=NUP188 PE=1 SV=1 0.623695 2.20814 2.09892E-05 129.07 80.245 129.07 1 S TLLSSLSRYFRRGAPSSPATGVLPSPQGKST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPXX RGAPS(0.624)S(0.375)PAT(0.001)GVLPSPQGK RGAPS(2.21)S(-2.21)PAT(-27.17)GVLPS(-72.66)PQGK 5 3 -0.52925 13353 0 0 14320 0 0 12492 0 0 14552 0 0 12169 0 0 13620 0 0 10358 0 0 13264 0 0 13968 0 0 9496.5 0 0 12632 0 0 13529 0 0 12620 0 0 14912 0 0 12346 0 0 13707 0 0 10730 0 0 13605 0 0 13629 0 0 9249.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17798000 17798000 0 0 NaN 2040 1178 1708 1708 1369;3239 1444;3436 3672 4075 3672 4075 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12603 3672 4075 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12603 3672 4075 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12603 Q5SRE5 1709 Q5SRE5 Q5SRE5 Nucleoporin NUP188 homolog NUP188 sp|Q5SRE5|NU188_HUMAN Nucleoporin NUP188 homolog OS=Homo sapiens GN=NUP188 PE=1 SV=1 0.898268 9.45952 2.816E-11 204.71 183.75 204.71 1 S LLSSLSRYFRRGAPSSPATGVLPSPQGKSTS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPXXX GAPS(0.102)S(0.898)PATGVLPSPQGK GAPS(-9.46)S(9.46)PAT(-60.46)GVLPS(-156.35)PQGK 5 3 0.11257 30935 0 0 42605 0 0 36315 0 0 39183 0 0 29146 0 0 33120 0 0 27866 0 0 35734 0 0 48319 0 0 14429 0 0 29293 0 0 40228 0 0 36168 0 0 40343 0 0 30002 0 0 33528 0 0 28987 0 0 36177 0 0 46809 0 0 14414 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 57913000 57913000 0 0 NaN 2041 1178 1709 1709 1369;3239 1444;3436 1552 1715;1716 1552 1716 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14599 1552 1716 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14599 1552 1716 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14599 Q5SSJ5 155 Q5SSJ5 Q5SSJ5 Heterochromatin protein 1-binding protein 3 HP1BP3 sp|Q5SSJ5|HP1B3_HUMAN Heterochromatin protein 1-binding protein 3 OS=Homo sapiens GN=HP1BP3 PE=1 SV=1 0.566174 1.45472 0.0474762 53.001 26.375 53.001 1 S SASQLARAQKQTPMASSPRPKMDAILTEAIK X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX QT(0.029)PMAS(0.566)S(0.405)PRPK QT(-12.93)PMAS(1.45)S(-1.45)PRPK 6 3 -0.72607 19629 0 0 25272 0 0 17211 0 0 23141 0 0 31149 0 0 17987 0 0 28269 0 0 25946 0 0 29729 0 0 2353.8 0 0 18565 0 0 23862 0 0 17635 0 0 23808 0 0 30748 0 0 18364 0 0 28954 0 0 25789 0 0 29272 0 0 2816.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21159000 21159000 0 0 NaN 2042 1179 155 155 3157 3349 3580 3970 3580 3970 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6594 3580 3970 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6594 3580 3970 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6594 Q5SW79 122 Q5SW79 Q5SW79 Centrosomal protein of 170 kDa CEP170 sp|Q5SW79|CE170_HUMAN Centrosomal protein of 170 kDa OS=Homo sapiens GN=CEP170 PE=1 SV=1 0.999928 41.41 0.000150622 117.93 84.136 117.93 1 S EEALKHEKFTIQLQLSQKSSESELSKSASAK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX FTIQLQLS(1)QK FT(-41.41)IQLQLS(41.41)QK 8 3 -0.52702 2448.6 0 0 1603.5 0 0 2370.8 0 0 1685.9 0 0 3168.9 0 0 2476.7 0 0 3311.8 0 0 2372.8 0 0 1609.4 0 0 3661.4 0 0 2316.7 0 0 1515.3 0 0 2401.8 0 0 1738.7 0 0 3169.1 0 0 2452.8 0 0 3317.7 0 0 2494.4 0 0 1660.2 0 0 3502.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5034500 5034500 0 0 NaN 2043 1180 122 122 1335 1408 1515 1678 1515 1678 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22429 1515 1678 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22429 1515 1678 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22429 Q5SW79;Q00G26 1160;203 Q5SW79 Q5SW79 Centrosomal protein of 170 kDa;Perilipin-5 CEP170;PLIN5 sp|Q5SW79|CE170_HUMAN Centrosomal protein of 170 kDa OS=Homo sapiens GN=CEP170 PE=1 SV=1;sp|Q00G26|PLIN5_HUMAN Perilipin-5 OS=Homo sapiens GN=PLIN5 PE=1 SV=2 0.923543 10.8204 0.00135825 117.76 26.244 117.76 1 S SRIDLLAQPRRTRLGSLSARSDSEATISRSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX LGS(0.924)LS(0.076)AR LGS(10.82)LS(-10.82)AR 3 2 -0.50185 46664 0 0 15084 0 0 42301 0 0 14218 0 0 15981 0 0 41279 0 0 17834 0 0 24915 0 0 15166 0 0 1841.8 0 0 44140 0 0 14244 0 0 42527 0 0 15086 0 0 17795 0 0 39966 0 0 17992 0 0 25681 0 0 15077 0 0 2310.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 50822000 50822000 0 0 NaN 2044 1180 1160 1160 2382 2519 2712 3030 2712 3030 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12562 2712 3030 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12562 2712 3030 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12562 Q5SW79 450 Q5SW79 Q5SW79 Centrosomal protein of 170 kDa CEP170 sp|Q5SW79|CE170_HUMAN Centrosomal protein of 170 kDa OS=Homo sapiens GN=CEP170 PE=1 SV=1 0.822377 6.6558 2.66789E-23 278.43 243.34 278.43 1 S GVPHGKLLKQKSEEPSVSIPFLQTALLRSSG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPXXX QKS(0.178)EEPS(0.822)VSIPFLQTALLR QKS(-6.66)EEPS(6.66)VS(-54.6)IPFLQT(-144.96)ALLR 7 3 0.32261 37631 0 0 39084 0 0 37646 0 0 38862 0 0 61079 0 0 41204 0 0 65303 0 0 50507 0 0 46887 0 0 37042 0 0 35608 0 0 36920 0 0 38202 0 0 39953 0 0 60642 0 0 41383 0 0 65766 0 0 51417 0 0 47044 0 0 36048 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 162620000 162620000 0 0 NaN 2045 1180 450 450 3056 3242 3469 3843 3469 3843 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23580 3469 3843 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23580 3469 3843 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23580 Q5SW79 958 Q5SW79 Q5SW79 Centrosomal protein of 170 kDa CEP170 sp|Q5SW79|CE170_HUMAN Centrosomal protein of 170 kDa OS=Homo sapiens GN=CEP170 PE=1 SV=1 0.998437 29.1803 0.00714854 93.166 56.072 63.181 1 S LVTGETERKSTQKRKSFTSLYKDRCSTGSPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX RKS(0.998)FT(0.001)SLYK RKS(29.18)FT(-29.18)S(-34.56)LY(-51.45)K 3 3 1.3272 38908 0 0 44983 0 0 37700 0 0 43757 0 0 53203 0 0 39380 0 0 63952 0 0 49818 0 0 48666 0 0 21529 0 0 36813 0 0 42487 0 0 38241 0 0 44933 0 0 53212 0 0 39839 0 0 64163 0 0 50215 0 0 48667 0 0 21426 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 45107000 45107000 0 0 NaN 2046 1180 958 958 3300;3770 3501;4011 3738;4276 4152;4751 3738 4152 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14454 4276 4751 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18388 4276 4751 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18388 Q5SW79 881 Q5SW79 Q5SW79 Centrosomal protein of 170 kDa CEP170 sp|Q5SW79|CE170_HUMAN Centrosomal protein of 170 kDa OS=Homo sapiens GN=CEP170 PE=1 SV=1 0.851033 7.5699 4.17977E-07 139.11 115.5 139.11 1 S SLALTSASRIRERSESLDPDSSMDTTLILKD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX S(0.149)ES(0.851)LDPDSSMDTTLILK S(-7.57)ES(7.57)LDPDS(-42.72)S(-62.08)MDT(-114.32)T(-114.57)LILK 3 3 -0.22074 5355.2 0 0 5937.1 0 0 5744.8 0 0 5308.2 0 0 5747.4 0 0 5038.1 0 0 6129.2 0 0 6813.5 0 0 6422 0 0 28559 0 0 5068.9 0 0 5605 0 0 5763 0 0 5484.4 0 0 5838 0 0 5138 0 0 6228.7 0 0 7626.2 0 0 6324.2 0 0 27049 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14697000 14697000 0 0 NaN 2047 1180 881 881 3703 3938 4198 4664 4198 4664 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21990 4198 4664 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21990 4198 4664 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21990 Q5SW79 1079 Q5SW79 Q5SW79 Centrosomal protein of 170 kDa CEP170 sp|Q5SW79|CE170_HUMAN Centrosomal protein of 170 kDa OS=Homo sapiens GN=CEP170 PE=1 SV=1 0.579345 3.66642 0.00462837 88.187 74.103 88.187 1 S VHSKLEGSKVTKSKTSPVVSGSSSKSTTLPR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX S(0.171)KT(0.249)S(0.579)PVVSGSSSK S(-5.29)KT(-3.67)S(3.67)PVVS(-36.92)GS(-57.08)S(-62.69)S(-65.38)K 4 3 2.1216 21783 0 0 23999 0 0 24280 0 0 24468 0 0 21630 0 0 24997 0 0 23180 0 0 25275 0 0 27218 0 0 7175.1 0 0 20622 0 0 22674 0 0 24275 0 0 25103 0 0 22132 0 0 25049 0 0 23632 0 0 25558 0 0 26685 0 0 7341.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19088000 19088000 0 0 NaN 2048 1180 1079 1079 3915 4173 4454 4952 4454 4952 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9222 4454 4952 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9222 4454 4952 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9222 Q5SW79 126 Q5SW79 Q5SW79 Centrosomal protein of 170 kDa CEP170 sp|Q5SW79|CE170_HUMAN Centrosomal protein of 170 kDa OS=Homo sapiens GN=CEP170 PE=1 SV=1 0.895523 9.33061 8.48416E-22 287.77 157.46 287.77 1 S KHEKFTIQLQLSQKSSESELSKSASAKSIDS X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPXXXXXXXXX S(0.104)S(0.896)ESELSK S(-9.33)S(9.33)ES(-60.81)ELS(-155.55)K 2 2 0.49417 64371 0 0 89078 0 0 65150 0 0 86344 0 0 71557 0 0 62373 0 0 77232 0 0 77666 0 0 92589 0 0 8473.4 0 0 60915 0 0 84133 0 0 65647 0 0 88437 0 0 72333 0 0 63797 0 0 78763 0 0 77568 0 0 90706 0 0 9776.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 92074000 92074000 0 0 NaN 2049 1180 126 126 4339 4625 4928 5472 4928 5472 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9902 4928 5472 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9902 4928 5472 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9902 Q5SW79;Q96L14 1522;231 Q5SW79 Q5SW79 Centrosomal protein of 170 kDa;Cep170-like protein CEP170;CEP170P1 sp|Q5SW79|CE170_HUMAN Centrosomal protein of 170 kDa OS=Homo sapiens GN=CEP170 PE=1 SV=1;sp|Q96L14|C170L_HUMAN Cep170-like protein OS=Homo sapiens GN=CEP170P1 PE=5 SV=2 0.617128 2.07385 1.35515E-11 181.02 149.1 181.02 2 S GFPSAMLPSPPKQKSSPVNNHHSPGQTPTLG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP S(0.383)S(0.617)PVNNHHS(0.992)PGQT(0.007)PT(0.001)LGQPEAR S(-2.07)S(2.07)PVNNHHS(21.8)PGQT(-21.8)PT(-29.64)LGQPEAR 2 3 -0.14392 0 4696.4 0 0 4954.3 0 0 4457.9 0 0 4361.4 0 0 5222.7 0 0 5917 0 0 5709.6 0 0 5924 0 0 5397.3 0 0 2758.1 0 0 4443.1 0 0 4676.8 0 0 4512.8 0 0 4539.4 0 0 5261.4 0 0 5866.8 0 0 5779.9 0 0 6025 0 0 5338.8 0 0 2734.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 9737900 0 9737900 0 NaN 2050 1180 1522 1522 4403 4691 4995 5542 4995 5542 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8693 4995 5542 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8693 4995 5542 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8693 Q5SW79;Q96L14 1529;238 Q5SW79 Q5SW79 Centrosomal protein of 170 kDa;Cep170-like protein CEP170;CEP170P1 sp|Q5SW79|CE170_HUMAN Centrosomal protein of 170 kDa OS=Homo sapiens GN=CEP170 PE=1 SV=1;sp|Q96L14|C170L_HUMAN Cep170-like protein OS=Homo sapiens GN=CEP170P1 PE=5 SV=2 0.992309 21.7991 1.35515E-11 181.02 149.1 181.02 2 S PSPPKQKSSPVNNHHSPGQTPTLGQPEARAL X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPPPPXX S(0.383)S(0.617)PVNNHHS(0.992)PGQT(0.007)PT(0.001)LGQPEAR S(-2.07)S(2.07)PVNNHHS(21.8)PGQT(-21.8)PT(-29.64)LGQPEAR 9 3 -0.14392 0 4696.4 0 0 4954.3 0 0 4457.9 0 0 4361.4 0 0 5222.7 0 0 5917 0 0 5709.6 0 0 5924 0 0 5397.3 0 0 2758.1 0 0 4443.1 0 0 4676.8 0 0 4512.8 0 0 4539.4 0 0 5261.4 0 0 5866.8 0 0 5779.9 0 0 6025 0 0 5338.8 0 0 2734.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 9737900 0 9737900 0 NaN 2051 1180 1529 1529 4403 4691 4995 5542 4995 5542 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8693 4995 5542 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8693 4995 5542 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8693 Q5SW79 627 Q5SW79 Q5SW79 Centrosomal protein of 170 kDa CEP170 sp|Q5SW79|CE170_HUMAN Centrosomal protein of 170 kDa OS=Homo sapiens GN=CEP170 PE=1 SV=1 0.783863 7.194 4.87074E-23 278.64 241.96 278.64 1 S LENETEISESGMTVRSTGSATSLASQGERRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPXX S(0.784)T(0.15)GS(0.067)ATSLASQGER S(7.19)T(-7.19)GS(-10.71)AT(-71.59)S(-81.47)LAS(-139.01)QGER 1 2 0.47094 17336 0 0 22776 0 0 15972 0 0 20458 0 0 20799 0 0 17630 0 0 22293 0 0 20444 0 0 24325 0 0 4659.5 0 0 16399 0 0 21502 0 0 16223 0 0 21102 0 0 20845 0 0 17841 0 0 22676 0 0 20538 0 0 23915 0 0 4860.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 31310000 31310000 0 0 NaN 2052 1180 627 627 4509 4802 5115 5680 5115 5680 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8915 5115 5680 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8915 5115 5680 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8915 Q5SW79 630 Q5SW79 Q5SW79 Centrosomal protein of 170 kDa CEP170 sp|Q5SW79|CE170_HUMAN Centrosomal protein of 170 kDa OS=Homo sapiens GN=CEP170 PE=1 SV=1 0.987233 19.107 1.74108E-41 334.79 286.8 334.79 1 S ETEISESGMTVRSTGSATSLASQGERRRRTL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX STGS(0.987)AT(0.012)SLASQGER S(-33.89)T(-41.24)GS(19.11)AT(-19.11)S(-37.83)LAS(-125.36)QGER 4 2 -0.17115 16633 0 0 22268 0 0 16905 0 0 21976 0 0 21649 0 0 17349 0 0 22948 0 0 21498 0 0 23487 0 0 3428.9 0 0 15740 0 0 21034 0 0 17068 0 0 22508 0 0 21708 0 0 17655 0 0 23312 0 0 21506 0 0 23151 0 0 3726.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 54294000 54294000 0 0 NaN 2053 1180 630 630 4509 4802 5114 5679 5114 5679 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8481 5114 5679 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8481 5114 5679 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8481 Q5SW96 14 Q5SW96 Q5SW96 Low density lipoprotein receptor adapter protein 1 LDLRAP1 sp|Q5SW96|ARH_HUMAN Low density lipoprotein receptor adapter protein 1 OS=Homo sapiens GN=LDLRAP1 PE=1 SV=3 0.919459 10.5752 0.00465121 86.803 38.163 86.803 1 S __MDALKSAGRALIRSPSLAKQSWGGGGRHR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX ALIRS(0.919)PS(0.081)LAK ALIRS(10.58)PS(-10.58)LAK 5 3 0.37103 10287 0 0 15978 0 0 10170 0 0 13778 0 0 7487.4 0 0 11102 0 0 7787.7 0 0 10394 0 0 16144 0 0 1996.2 0 0 9733.6 0 0 15081 0 0 10215 0 0 14238 0 0 7768.7 0 0 11242 0 0 8141.6 0 0 10513 0 0 15575 0 0 2120.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22259000 22259000 0 0 NaN 2054 1181 14 14 295 316 337 377 337 377 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14628 337 377 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14628 337 377 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14628 Q5T1M5 320 Q5T1M5 Q5T1M5 FK506-binding protein 15 FKBP15 sp|Q5T1M5|FKB15_HUMAN FK506-binding protein 15 OS=Homo sapiens GN=FKBP15 PE=1 SV=2 0.724304 4.62818 0.0189245 59.661 42.724 59.661 1 S RDSAAPSPIPGADNLSADPVVSPPTSIPFKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPPPPPPPPPPPPX DS(0.014)AAPS(0.25)PIPGADNLS(0.724)ADPVVS(0.011)PPTSIPFK DS(-17.08)AAPS(-4.63)PIPGADNLS(4.63)ADPVVS(-18.1)PPT(-33)S(-32.52)IPFK 15 4 -0.11399 14168 0 0 10503 0 0 9083.9 0 0 10470 0 0 16184 0 0 15315 0 0 14817 0 0 14180 0 0 12416 0 0 38639 0 0 13387 0 0 9921.3 0 0 9523.6 0 0 10831 0 0 15982 0 0 15194 0 0 15083 0 0 15432 0 0 12353 0 0 36711 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 73983000 73983000 0 0 NaN 2055 1182 320 320 800 848 904 996 904 996 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23216 904 996 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23216 904 996 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23216 Q5T1M5 956 Q5T1M5 Q5T1M5 FK506-binding protein 15 FKBP15 sp|Q5T1M5|FKB15_HUMAN FK506-binding protein 15 OS=Homo sapiens GN=FKBP15 PE=1 SV=2 1 71.8023 4.20996E-32 316.04 297.78 316.04 1 S SEEEEEKAEERPRRPSQEQSASASSGQPQAP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RPS(1)QEQSASASSGQPQAPLNR RPS(71.8)QEQS(-71.8)AS(-115.68)AS(-172.19)S(-192.49)GQPQAPLNR 3 3 -0.61026 4604.6 0 0 2786.3 0 0 4403.9 0 0 3236.6 0 0 5308.4 0 0 4518.6 0 0 5250.2 0 0 4198.5 0 0 3885.2 0 0 2995.5 0 0 4356.4 0 0 2634.7 0 0 4457 0 0 3316.4 0 0 5331.5 0 0 4473.7 0 0 5309.7 0 0 4314 0 0 3891.5 0 0 2917.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 107620000 107620000 0 0 NaN 2056 1182 956 956 3411 3623 3864 4289 3864 4289 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7418 3864 4289 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7418 3864 4289 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7418 Q5T1M5 346 Q5T1M5 Q5T1M5 FK506-binding protein 15 FKBP15 sp|Q5T1M5|FKB15_HUMAN FK506-binding protein 15 OS=Homo sapiens GN=FKBP15 PE=1 SV=2 0.753271 4.98591 5.85894E-11 188.73 162.61 188.73 1 S IPFKSGEPALRTKSNSLSEQLAINTSPDAVK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.239)NS(0.753)LS(0.008)EQLAINTSPDAVK S(-4.99)NS(4.99)LS(-19.88)EQLAINT(-138.21)S(-156.01)PDAVK 3 3 2.3508 7887.9 0 0 6606.5 0 0 10105 0 0 6210.2 0 0 23159 0 0 9204.5 0 0 24477 0 0 13203 0 0 7414.2 0 0 12090 0 0 7472.3 0 0 6238.6 0 0 10210 0 0 6448.8 0 0 22733 0 0 9165.4 0 0 24385 0 0 13453 0 0 8039.2 0 0 11690 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21013000 21013000 0 0 NaN 2057 1182 346 346 4060 4330 4619 5129 4619 5129 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18043 4619 5129 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18043 4619 5129 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18043 Q5T1M5 1161 Q5T1M5 Q5T1M5 FK506-binding protein 15 FKBP15 sp|Q5T1M5|FKB15_HUMAN FK506-binding protein 15 OS=Homo sapiens GN=FKBP15 PE=1 SV=2 0.920432 11.8748 4.18088E-31 298.62 262.2 298.62 1 S TVAGAALRPSHHSQRSSLSGDEEDELFKGAT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX S(0.92)S(0.06)LS(0.02)GDEEDELFK S(11.87)S(-11.87)LS(-16.67)GDEEDELFK 1 2 -0.21808 12825 0 0 7131.5 0 0 11724 0 0 6968.9 0 0 13831 0 0 12386 0 0 14223 0 0 11976 0 0 7567.5 0 0 21947 0 0 12131 0 0 6736 0 0 11896 0 0 7252.4 0 0 13911 0 0 12209 0 0 14277 0 0 12690 0 0 7749.2 0 0 20943 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8437700 8437700 0 0 NaN 2058 1182 1161 1161 4368 4653 4957 5502 4957 5502 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18930 4957 5502 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18930 4957 5502 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18930 Q5T200 642 Q5T200 Q5T200 Zinc finger CCCH domain-containing protein 13 ZC3H13 sp|Q5T200|ZC3HD_HUMAN Zinc finger CCCH domain-containing protein 13 OS=Homo sapiens GN=ZC3H13 PE=1 SV=1 0.761517 5.04222 0.000178138 115.26 84.386 115.26 1 S GERDRRDNRERDQRPSSPIRHQGRNDELERD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX ERDQRPS(0.762)S(0.238)PIR ERDQRPS(5.04)S(-5.04)PIR 7 3 -0.25907 5103 0 0 6141.8 0 0 6513.9 0 0 5935.7 0 0 4670.4 0 0 5834.8 0 0 4865.6 0 0 5467.7 0 0 6105.7 0 0 1593.3 0 0 4834 0 0 5800.8 0 0 6455.8 0 0 6105.6 0 0 4852.3 0 0 5851.4 0 0 4977.4 0 0 5546.7 0 0 5971.9 0 0 1626.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18929000 18929000 0 0 NaN 2059 1183 642 642 781;1114 829;1173 1262 1388 1262 1388 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5267 1262 1388 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5267 1262 1388 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5267 Q5T200 643 Q5T200 Q5T200 Zinc finger CCCH domain-containing protein 13 ZC3H13 sp|Q5T200|ZC3HD_HUMAN Zinc finger CCCH domain-containing protein 13 OS=Homo sapiens GN=ZC3H13 PE=1 SV=1 0.748718 4.74157 0.00359024 94.747 72.743 94.747 1 S ERDRRDNRERDQRPSSPIRHQGRNDELERDE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX DQRPS(0.251)S(0.749)PIR DQRPS(-4.74)S(4.74)PIR 6 2 -0.70913 11948 0 0 11764 0 0 11431 0 0 12916 0 0 9897.5 0 0 11306 0 0 10241 0 0 11848 0 0 12578 0 0 2595.6 0 0 11304 0 0 11120 0 0 11522 0 0 13165 0 0 10142 0 0 11416 0 0 10472 0 0 11941 0 0 12312 0 0 2718.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 36965000 36965000 0 0 NaN 2060 1183 643 643 781;1114 829;1173 885 976 885 976 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5780 885 976 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5780 885 976 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5780 Q5T200 198 Q5T200 Q5T200 Zinc finger CCCH domain-containing protein 13 ZC3H13 sp|Q5T200|ZC3HD_HUMAN Zinc finger CCCH domain-containing protein 13 OS=Homo sapiens GN=ZC3H13 PE=1 SV=1 1 161.445 1.32314E-05 161.44 71.559 161.44 1 S ENMEKREEIIIKKEVSPEVVRSKLSPSPSLR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX EVS(1)PEVVR EVS(161.44)PEVVR 3 2 0.25119 40263 0 0 47184 0 0 40442 0 0 49581 0 0 40529 0 0 42761 0 0 40327 0 0 43086 0 0 49325 0 0 5350.6 0 0 38100 0 0 44587 0 0 40713 0 0 50652 0 0 41129 0 0 43180 0 0 41306 0 0 43367 0 0 48287 0 0 6035.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 129610000 129610000 0 0 NaN 2061 1183 198 198 1221 1284 1383 1534 1383 1534 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10617 1383 1534 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10617 1383 1534 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10617 Q5T200 993 Q5T200 Q5T200 Zinc finger CCCH domain-containing protein 13 ZC3H13 sp|Q5T200|ZC3HD_HUMAN Zinc finger CCCH domain-containing protein 13 OS=Homo sapiens GN=ZC3H13 PE=1 SV=1 1 80.9009 1.06129E-22 269.61 224.28 269.61 1 S ERGNIETTSEDGQVFSPKKGQKKKSIEKKRK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPXXXXXXXXXXXXX GNIETTSEDGQVFS(1)PK GNIET(-118.22)T(-102.83)S(-80.9)EDGQVFS(80.9)PK 14 2 1.366 6887.9 0 0 7044.1 0 0 6967.4 0 0 6892.9 0 0 4839.3 0 0 7885.4 0 0 4666.7 0 0 7593.7 0 0 8586.6 0 0 24011 0 0 6518 0 0 6653.4 0 0 6984.8 0 0 7102.6 0 0 5037.9 0 0 7901.2 0 0 4865.9 0 0 8351.8 0 0 8306.1 0 0 22785 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9065300 9065300 0 0 NaN 2062 1183 993 993 1528 1609 1738 1931 1738 1931 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15039 1738 1931 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15039 1738 1931 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15039 Q5T200 265 Q5T200 Q5T200 Zinc finger CCCH domain-containing protein 13 ZC3H13 sp|Q5T200|ZC3HD_HUMAN Zinc finger CCCH domain-containing protein 13 OS=Homo sapiens GN=ZC3H13 PE=1 SV=1 1 44.5551 0.00012546 103.17 88.913 44.555 1;2 S NSKTNQSKKKGPRTPSPPPPIPEDIALGKKY X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPX GPRT(1)PS(1)PPPPIPEDIALGKK GPRT(44.56)PS(44.56)PPPPIPEDIALGKK 6 4 0.59773 5937.2 10290 0 7093.1 13110 0 7143.2 12232 0 6976.6 12226 0 6703.8 11356 0 7112.7 11220 0 6771.2 10370 0 7145.4 11282 0 7190.4 13122 0 11083 33993 0 5622.6 9744.3 0 6699.9 12379 0 7118.2 12193 0 7172.6 12591 0 6830.3 11565 0 7144.6 11356 0 6900.7 10679 0 7500 12339 0 7077 12831 0 10602 32270 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 27786000 8240100 19546000 0 NaN 2063 1183 265 265 1559;1560;4854 1643;1644;5179 1776;1777;5518 1974;1975;6136 1777 1975 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18691 5518 6136 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20790 5518 6136 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20790 Q5T200 242 Q5T200 Q5T200 Zinc finger CCCH domain-containing protein 13 ZC3H13 sp|Q5T200|ZC3HD_HUMAN Zinc finger CCCH domain-containing protein 13 OS=Homo sapiens GN=ZC3H13 PE=1 SV=1 0.964828 14.3887 1.12044E-22 264.75 224.16 192.46 1 S SSSASKKDRKTSAVSSPLLDQQRNSKTNQSK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPXXXXXXXX KTSAVS(0.035)S(0.965)PLLDQQR KT(-47.15)S(-44.82)AVS(-14.39)S(14.39)PLLDQQR 7 3 -0.51195 58032 0 0 57755 0 0 66403 0 0 57059 0 0 50904 0 0 62681 0 0 54936 0 0 61569 0 0 61643 0 0 21303 0 0 54944 0 0 54555 0 0 66201 0 0 58719 0 0 52636 0 0 62604 0 0 55910 0 0 62443 0 0 60538 0 0 21485 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 158840000 158840000 0 0 NaN 2064 1183 242 242 2250;4906 2378;5231 2559;5574 2856;2857;6196 2559 2856 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12334 5574 6196 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13111 5574 6196 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13111 Q5T200 110 Q5T200 Q5T200 Zinc finger CCCH domain-containing protein 13 ZC3H13 sp|Q5T200|ZC3HD_HUMAN Zinc finger CCCH domain-containing protein 13 OS=Homo sapiens GN=ZC3H13 PE=1 SV=1 0.971041 17.8795 9.68326E-07 139 95.392 139 1 S DVDTEPQKRNTEESSSPVRKESSRGRHREKE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX NTEES(0.016)S(0.013)S(0.971)PVRK NT(-56.08)EES(-17.88)S(-18.69)S(17.88)PVRK 7 3 -0.0081898 62105 0 0 57146 0 0 61128 0 0 60560 0 0 48489 0 0 71231 0 0 45492 0 0 59820 0 0 58365 0 0 3343.4 0 0 58763 0 0 54003 0 0 61448 0 0 62144 0 0 49923 0 0 70785 0 0 46803 0 0 60546 0 0 57043 0 0 4532.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 188910000 188910000 0 0 NaN 2065 1183 110 110 2945 3124 3345 3709 3345 3709 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6731 3345 3709 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6731 3345 3709 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6731 Q5T200 77 Q5T200 Q5T200 Zinc finger CCCH domain-containing protein 13 ZC3H13 sp|Q5T200|ZC3HD_HUMAN Zinc finger CCCH domain-containing protein 13 OS=Homo sapiens GN=ZC3H13 PE=1 SV=1 0.999996 54.3094 0.00026467 103.79 65.28 103.79 1 S GPSPRGKGYSSNYRRSPERPTGDLRERMKNK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPXXXXXX RS(1)PERPTGDLR RS(54.31)PERPT(-54.31)GDLR 2 3 0.24647 44727 0 0 38838 0 0 44581 0 0 39636 0 0 31519 0 0 42474 0 0 32089 0 0 39425 0 0 40768 0 0 7154.3 0 0 42323 0 0 36694 0 0 44740 0 0 40694 0 0 32774 0 0 42422 0 0 32874 0 0 39880 0 0 39858 0 0 7649.1 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 172580000 172580000 0 0 NaN 2066 1183 77 77 3477;4093 3694;4364 3940;4654 4376;5167 3940 4376 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5970 3940 4376 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5970 3940 4376 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5970 Q5T200 207 Q5T200 Q5T200 Zinc finger CCCH domain-containing protein 13 ZC3H13 sp|Q5T200|ZC3HD_HUMAN Zinc finger CCCH domain-containing protein 13 OS=Homo sapiens GN=ZC3H13 PE=1 SV=1 0.901135 9.6113 6.30181E-05 130.1 95.095 130.1 1 S IIKKEVSPEVVRSKLSPSPSLRKSSKSPKRK X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX SKLS(0.901)PS(0.099)PSLR S(-40.64)KLS(9.61)PS(-9.61)PS(-35.81)LR 4 3 -0.15927 15408 0 0 14091 0 0 15505 0 0 13433 0 0 9863.2 0 0 13229 0 0 11348 0 0 13312 0 0 14202 0 0 1838.9 0 0 14580 0 0 13308 0 0 15541 0 0 13830 0 0 10366 0 0 13274 0 0 11558 0 0 13405 0 0 13892 0 0 2039.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 101600000 101600000 0 0 NaN 2067 1183 207 207 3888 4142 4421 4915 4421 4915 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11428 4421 4915 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11428 4421 4915 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11428 Q5T200 877 Q5T200 Q5T200 Zinc finger CCCH domain-containing protein 13 ZC3H13 sp|Q5T200|ZC3HD_HUMAN Zinc finger CCCH domain-containing protein 13 OS=Homo sapiens GN=ZC3H13 PE=1 SV=1 0.998777 29.2475 4.32486E-15 228.38 188.99 228.38 1 S RLLSQVVRPQESRSLSPSHLTEDRQGRWKEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX SLS(0.999)PS(0.001)HLTEDR S(-44.49)LS(29.25)PS(-29.25)HLT(-103.96)EDR 3 3 0.84619 9087.3 0 0 8541.5 0 0 7421.2 0 0 8914.3 0 0 5848.7 0 0 9349.2 0 0 8678.7 0 0 10049 0 0 8395 0 0 1597.6 0 0 8592.7 0 0 8071 0 0 7554.6 0 0 9137.1 0 0 6067.9 0 0 9363.5 0 0 8690.5 0 0 10100 0 0 8295.4 0 0 1736.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 34569000 34569000 0 0 NaN 2068 1183 877 877 3997 4262 4550 5058 4550 5058 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11542 4550 5058 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11542 4550 5058 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11542 Q5T200 318 Q5T200 Q5T200 Zinc finger CCCH domain-containing protein 13 ZC3H13 sp|Q5T200|ZC3HD_HUMAN Zinc finger CCCH domain-containing protein 13 OS=Homo sapiens GN=ZC3H13 PE=1 SV=1 0.346861 0 0.0322096 63.165 53.253 63.165 S DFERQREKRDKPRSTSPAGQHHSPISSRHHS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.306)T(0.347)S(0.347)PAGQHHS(0.804)PIS(0.103)S(0.092)R S(-0.55)T(0)S(0)PAGQHHS(8.93)PIS(-8.93)S(-9.42)R 3 3 0.323 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2069 1183 318 318 4522 4821 5136 5704 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5560 5136 5704 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5560 5136 5704 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5560 Q5T200 325 Q5T200 Q5T200 Zinc finger CCCH domain-containing protein 13 ZC3H13 sp|Q5T200|ZC3HD_HUMAN Zinc finger CCCH domain-containing protein 13 OS=Homo sapiens GN=ZC3H13 PE=1 SV=1 0.804201 8.93077 0.0322096 63.165 53.253 63.165 2 S KRDKPRSTSPAGQHHSPISSRHHSSSSQSGS X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPXXXXXXXXXX S(0.306)T(0.347)S(0.347)PAGQHHS(0.804)PIS(0.103)S(0.092)R S(-0.55)T(0)S(0)PAGQHHS(8.93)PIS(-8.93)S(-9.42)R 10 3 0.323 0 2490.4 0 0 2651.9 0 0 2042.9 0 0 2955 0 0 2746 0 0 2451.7 0 0 3032.9 0 0 2746.4 0 0 2359.4 0 0 2605.1 0 0 2354.9 0 0 2506.8 0 0 2091.9 0 0 3007.6 0 0 2748.5 0 0 2488.5 0 0 3055 0 0 2821.9 0 0 2356.6 0 0 2516.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 4866200 0 4866200 0 NaN 2070 1183 325 325 4522 4821 5136 5704 5136 5704 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5560 5136 5704 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5560 5136 5704 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5560 Q5T4S7 619 Q5T4S7 Q5T4S7 E3 ubiquitin-protein ligase UBR4 UBR4 sp|Q5T4S7|UBR4_HUMAN E3 ubiquitin-protein ligase UBR4 OS=Homo sapiens GN=UBR4 PE=1 SV=1 0.652827 2.74252 7.69821E-05 109.66 96.735 109.66 1 S EKAAPPPPPPPPPLESSPRVKSPSKQAPGEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPXXXXXXXXXXXX AAPPPPPPPPPLES(0.653)S(0.347)PR AAPPPPPPPPPLES(2.74)S(-2.74)PR 14 3 0.105 12279 0 0 14755 0 0 11209 0 0 15111 0 0 11285 0 0 9885.3 0 0 12669 0 0 13135 0 0 14934 0 0 15994 0 0 11615 0 0 13941 0 0 11352 0 0 15410 0 0 11469 0 0 10213 0 0 12892 0 0 13532 0 0 14639 0 0 15364 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 71388000 71388000 0 0 NaN 2071 1184 619 619 51 55 60 72 60 72 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14060 60 72 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14060 60 72 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14060 Q5T4S7 181 Q5T4S7 Q5T4S7 E3 ubiquitin-protein ligase UBR4 UBR4 sp|Q5T4S7|UBR4_HUMAN E3 ubiquitin-protein ligase UBR4 OS=Homo sapiens GN=UBR4 PE=1 SV=1 0.997991 26.9618 1.06001E-07 151.41 123.92 151.41 1 S TLSDVEDQKELASPVSPELRQKEVQMNFLNQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX TLSDVEDQKELAS(0.002)PVS(0.998)PELR T(-115.78)LS(-95.11)DVEDQKELAS(-26.96)PVS(26.96)PELR 16 3 0.2086 25147 0 0 38431 0 0 23859 0 0 38378 0 0 30134 0 0 25757 0 0 33660 0 0 34515 0 0 42514 0 0 33919 0 0 23791 0 0 36304 0 0 24183 0 0 39205 0 0 30268 0 0 26555 0 0 34337 0 0 35303 0 0 41573 0 0 32737 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 41878000 41878000 0 0 NaN 2072 1184 181 181 1023;4788 1079;5106 1167;5440 1286;6051 5440 6051 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17787 5440 6051 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17787 5440 6051 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17787 Q5T4S7 2719 Q5T4S7 Q5T4S7 E3 ubiquitin-protein ligase UBR4 UBR4 sp|Q5T4S7|UBR4_HUMAN E3 ubiquitin-protein ligase UBR4 OS=Homo sapiens GN=UBR4 PE=1 SV=1 0.588238 1.54934 0.000892536 99.732 59.814 99.732 1 S VLRPRNKRRHVTLPSSPRSNTPMGDKDDDDD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX HVTLPS(0.412)S(0.588)PR HVT(-43.51)LPS(-1.55)S(1.55)PR 7 3 -0.11777 9241.7 0 0 17482 0 0 8874.1 0 0 14402 0 0 10690 0 0 9889.7 0 0 16727 0 0 19148 0 0 17162 0 0 1084.4 0 0 8743.6 0 0 16497 0 0 8990.4 0 0 14903 0 0 10827 0 0 10232 0 0 16749 0 0 18881 0 0 16915 0 0 1464.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 66119000 66119000 0 0 NaN 2073 1184 2719 2719 1761 1860 2007 2237 2007 2237 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9823 2007 2237 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9823 2007 2237 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9823 Q5T5C0 684 Q5T5C0 Q5T5C0 Syntaxin-binding protein 5 STXBP5 sp|Q5T5C0|STXB5_HUMAN Syntaxin-binding protein 5 OS=Homo sapiens GN=STXBP5 PE=1 SV=1 1 54.5394 0.0416393 54.539 12.349 54.539 1 S IELYGSNDPYRREPRSPRKSRQPSGAGLCDI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX EPRS(1)PRK EPRS(54.54)PRK 4 3 2.2531 5964.1 0 0 6609.6 0 0 5559.7 0 0 8585.2 0 0 12390 0 0 4845.2 0 0 10642 0 0 8287.3 0 0 8625.1 0 0 4026.1 0 0 5642 0 0 6255.1 0 0 5701.9 0 0 8634.4 0 0 12143 0 0 5074.2 0 0 10861 0 0 8300.7 0 0 8596 0 0 3982.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 4488500 4488500 0 0 NaN 2074 1185 684 684 1090 1148 1236 1360 1236 1360 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5550 1236 1360 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5550 1236 1360 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5550 Q5T5C0 692 Q5T5C0 Q5T5C0 Syntaxin-binding protein 5 STXBP5 sp|Q5T5C0|STXB5_HUMAN Syntaxin-binding protein 5 OS=Homo sapiens GN=STXBP5 PE=1 SV=1 1 93.2469 6.56483E-12 191.11 149.85 173.96 1 S PYRREPRSPRKSRQPSGAGLCDISEGTVVPE X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP QPS(1)GAGLCDISEGTVVPEDR QPS(93.25)GAGLCDIS(-93.25)EGT(-137.48)VVPEDR 3 3 1.4387 10896 0 0 10805 0 0 11412 0 0 10223 0 0 19005 0 0 10534 0 0 20231 0 0 16789 0 0 13554 0 0 31648 0 0 10313 0 0 10204 0 0 11557 0 0 10537 0 0 18849 0 0 10683 0 0 20352 0 0 17552 0 0 13657 0 0 30189 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 38244000 38244000 0 0 NaN 2075 1185 692 692 3104;4274 3292;4554 3522;4854 3905;5386 3522 3905 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16455 4854 5386 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14440 4854 5386 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14440 Q5T5C0 782 Q5T5C0 Q5T5C0 Syntaxin-binding protein 5 STXBP5 sp|Q5T5C0|STXB5_HUMAN Syntaxin-binding protein 5 OS=Homo sapiens GN=STXBP5 PE=1 SV=1 0.747998 6.97851 0.00298809 93.777 75.412 93.777 2 S DLDVKDNSFSRSRSSSVTSIDKESREAISAL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX S(0.107)S(0.145)S(0.748)VT(0.255)S(0.746)IDKESR S(-8.36)S(-6.98)S(6.98)VT(-4.55)S(4.55)IDKES(-54.19)R 3 3 -0.56105 0 19354 0 0 24541 0 0 17360 0 0 26456 0 0 56780 0 0 17236 0 0 56337 0 0 35126 0 0 23261 0 0 8349.6 0 0 18306 0 0 23194 0 0 18077 0 0 26900 0 0 55255 0 0 17928 0 0 56461 0 0 34792 0 0 24354 0 0 8675 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 55273000 0 55273000 0 NaN 2076 1185 782 782 4477 4768;4769 5076 5632;5633 5076 5632 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9720 5076 5632 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9720 5076 5632 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9720 Q5T5C0 785 Q5T5C0 Q5T5C0 Syntaxin-binding protein 5 STXBP5 sp|Q5T5C0|STXB5_HUMAN Syntaxin-binding protein 5 OS=Homo sapiens GN=STXBP5 PE=1 SV=1 0.88887 9.58176 0.00298809 93.777 75.412 65.113 1;2 S VKDNSFSRSRSSSVTSIDKESREAISALHFC X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX S(0.003)S(0.003)S(0.007)VT(0.098)S(0.889)IDKESR S(-24.9)S(-24.9)S(-20.74)VT(-9.58)S(9.58)IDKES(-47.25)R 6 3 0.14989 13943 19354 0 19384 24541 0 12906 17360 0 18686 26456 0 30546 56780 0 16206 17236 0 37985 56337 0 22612 35126 0 20511 23261 0 3096.7 8349.6 0 13190 18306 0 18307 23194 0 13285 18077 0 19189 26900 0 30046 55255 0 16441 17928 0 37830 56461 0 22527 34792 0 20980 24354 0 3439.2 8675 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 93158000 37885000 55273000 0 NaN 2077 1185 785 785 4477 4768;4769 5075;5076 5631;5632;5633 5075 5631 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9412 5076 5632 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9720 5076 5632 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9720 Q5T5J6 158 Q5T5J6 Q5T5J6 Transcriptional protein SWT1 SWT1 sp|Q5T5J6|SWT1_HUMAN Transcriptional protein SWT1 OS=Homo sapiens GN=SWT1 PE=2 SV=1 1 42.3949 0.0397 42.395 17.54 42.395 1 S KLDHGIKSLSSPKIASDVKPKAEGQASENKW X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX IAS(1)DVKPK IAS(42.39)DVKPK 3 3 0.28779 110490 0 0 43945 0 0 105740 0 0 27199 0 0 30871 0 0 85844 0 0 28972 0 0 52824 0 0 36176 0 0 3122.4 0 0 104540 0 0 41418 0 0 105830 0 0 29892 0 0 35729 0 0 83020 0 0 29779 0 0 54360 0 0 35389 0 0 4162.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 111040000 111040000 0 0 NaN 2078 1186 158 158 1779 1878 2025 2256 2025 2256 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9644 2025 2256 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9644 2025 2256 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9644 Q5T5U3 1513 Q5T5U3 Q5T5U3 Rho GTPase-activating protein 21 ARHGAP21 sp|Q5T5U3|RHG21_HUMAN Rho GTPase-activating protein 21 OS=Homo sapiens GN=ARHGAP21 PE=1 SV=1 0.777855 5.53869 0.00793423 75.911 60.34 75.911 1 S PSEEPSPPHNSKHNKSPTLSCRFAILKESPR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX HNKS(0.778)PT(0.217)LS(0.005)CR HNKS(5.54)PT(-5.54)LS(-22.04)CR 4 3 0.65605 6315.7 0 0 13578 0 0 5199.6 0 0 13591 0 0 7886.1 0 0 5850.5 0 0 7405.9 0 0 10579 0 0 15821 0 0 3505.7 0 0 5972.1 0 0 12827 0 0 5331.9 0 0 13830 0 0 7845.4 0 0 6275.7 0 0 7792.1 0 0 10534 0 0 15254 0 0 3545.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11528000 11528000 0 0 NaN 2079 1187 1513 1513 1730 1824 1969 2195 1969 2195 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6428 1969 2195 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6428 1969 2195 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6428 Q5T5Y3 563 Q5T5Y3 Q5T5Y3 Calmodulin-regulated spectrin-associated protein 1 CAMSAP1 sp|Q5T5Y3|CAMP1_HUMAN Calmodulin-regulated spectrin-associated protein 1 OS=Homo sapiens GN=CAMSAP1 PE=1 SV=2 1 127.168 2.14157E-05 127.17 115.32 127.17 1 S ADVVPQQADPEFPRASPRALGLTANARSPQG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX ADVVPQQADPEFPRAS(1)PR ADVVPQQADPEFPRAS(127.17)PR 16 3 0.29454 17108 0 0 23579 0 0 15143 0 0 25409 0 0 11665 0 0 16185 0 0 12880 0 0 18879 0 0 26111 0 0 11052 0 0 16182 0 0 22284 0 0 15321 0 0 25829 0 0 12073 0 0 16690 0 0 13414 0 0 19166 0 0 25202 0 0 10844 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 52895000 52895000 0 0 NaN 2080 1188 563 563 125 131 141 156 141 156 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14363 141 156 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14363 141 156 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14363 Q5T5Y3 1080 Q5T5Y3 Q5T5Y3 Calmodulin-regulated spectrin-associated protein 1 CAMSAP1 sp|Q5T5Y3|CAMP1_HUMAN Calmodulin-regulated spectrin-associated protein 1 OS=Homo sapiens GN=CAMSAP1 PE=1 SV=2 0.97236 15.4629 5.38359E-05 109.85 86.968 109.85 1 S QDHKVKAPVHFVEPLSPTGVAGHRKAPRLGQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPXXXXXXX APVHFVEPLS(0.972)PT(0.028)GVAGHR APVHFVEPLS(15.46)PT(-15.46)GVAGHR 10 3 0.18946 7248.4 0 0 7990.1 0 0 7684.6 0 0 8387.9 0 0 8915.4 0 0 7059.9 0 0 8781.5 0 0 8396.7 0 0 7548.4 0 0 7299.4 0 0 6860.5 0 0 7550.2 0 0 7727.7 0 0 8566.8 0 0 8971.7 0 0 7166.3 0 0 8911.4 0 0 8590.7 0 0 7500.3 0 0 7067.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9425500 9425500 0 0 NaN 2081 1188 1080 1080 382 409 444 493 444 493 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16280 444 493 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16280 444 493 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16280 Q5T8P6 127 Q5T8P6 Q5T8P6 RNA-binding protein 26 RBM26 sp|Q5T8P6|RBM26_HUMAN RNA-binding protein 26 OS=Homo sapiens GN=RBM26 PE=1 SV=3 0.980975 19.3372 0.0397183 48.468 36.255 48.468 1 S KEEEREKKFSRRLNHSPPQSSSRYRENRSRD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX RLNHS(0.981)PPQS(0.011)S(0.006)S(0.002)R RLNHS(19.34)PPQS(-19.34)S(-22.07)S(-28.11)R 5 3 -0.20893 1183 0 0 1574.2 0 0 1572.8 0 0 1670.6 0 0 1623.6 0 0 1282 0 0 2570.6 0 0 1614.9 0 0 1561.2 0 0 2059.6 0 0 1120.9 0 0 1487.7 0 0 1563.7 0 0 1703.2 0 0 1657.1 0 0 1310.4 0 0 2543.6 0 0 1669 0 0 1583.3 0 0 1976.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 31265000 31265000 0 0 NaN 2082 1189 127 127 3315 3517 3754 4170 3754 4170 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5128 3754 4170 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5128 3754 4170 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5128 Q5TBA9 1983 Q5TBA9 Q5TBA9 Protein furry homolog FRY sp|Q5TBA9|FRY_HUMAN Protein furry homolog OS=Homo sapiens GN=FRY PE=1 SV=1 0.873044 8.37383 0.0443237 44.318 17.803 44.318 1 S GNTATAERSRHQRSFSVPKKFGVIDRSSDPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX S(0.127)FS(0.873)VPKK S(-8.37)FS(8.37)VPKK 3 3 -0.88149 23994 0 0 3072.3 0 0 27182 0 0 3298.8 0 0 7957.8 0 0 25055 0 0 8265.3 0 0 12948 0 0 3036.2 0 0 1576.3 0 0 22716 0 0 2903.6 0 0 26952 0 0 3722.8 0 0 9210 0 0 23994 0 0 8255.4 0 0 13505 0 0 3217.6 0 0 1783.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14716000 14716000 0 0 NaN 2083 1191 1983 1983 3769 4010 4275 4750 4275 4750 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14420 4275 4750 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14420 4275 4750 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14420 Q5TCZ1 421 Q5TCZ1 Q5TCZ1 SH3 and PX domain-containing protein 2A SH3PXD2A sp|Q5TCZ1|SPD2A_HUMAN SH3 and PX domain-containing protein 2A OS=Homo sapiens GN=SH3PXD2A PE=1 SV=1 0.551454 0.897023 5.37227E-06 153.54 105.56 153.54 1 S SPAVARIAPQRAQISSPNLRTRPPPRRESSL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX AQIS(0.449)S(0.551)PNLR AQIS(-0.9)S(0.9)PNLR 5 2 -0.0088132 17860 0 0 11635 0 0 17817 0 0 12090 0 0 14689 0 0 20093 0 0 15372 0 0 14944 0 0 10790 0 0 6027.6 0 0 16900 0 0 10994 0 0 17906 0 0 12515 0 0 15096 0 0 19730 0 0 15489 0 0 15371 0 0 10841 0 0 6021.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12703000 12703000 0 0 NaN 2084 1192 421 421 394 421 456 505 456 505 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10623 456 505 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10623 456 505 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10623 Q5TDH0 105 Q5TDH0 Q5TDH0 Protein DDI1 homolog 2 DDI2 sp|Q5TDH0|DDI2_HUMAN Protein DDI1 homolog 2 OS=Homo sapiens GN=DDI2 PE=1 SV=1 0.431346 0 0.0105513 72.615 51.838 72.615 S NLPRIDFSSIAVPGTSSPRQRQPPGTQQSHS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX IDFSSIAVPGT(0.137)S(0.431)S(0.431)PR IDFS(-53.83)S(-53.83)IAVPGT(-4.97)S(0)S(0)PR 12 3 -0.46999 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2085 1193 105 105 1790 1890 2037 2270 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21234 2037 2270 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21234 2037 2270 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21234 Q5TDH0 106 Q5TDH0 Q5TDH0 Protein DDI1 homolog 2 DDI2 sp|Q5TDH0|DDI2_HUMAN Protein DDI1 homolog 2 OS=Homo sapiens GN=DDI2 PE=1 SV=1 0.431346 0 0.0105513 72.615 51.838 72.615 S LPRIDFSSIAVPGTSSPRQRQPPGTQQSHSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IDFSSIAVPGT(0.137)S(0.431)S(0.431)PR IDFS(-53.83)S(-53.83)IAVPGT(-4.97)S(0)S(0)PR 13 3 -0.46999 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2086 1193 106 106 1790 1890 2037 2270 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21234 2037 2270 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21234 2037 2270 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21234 Q5THK1 1029 Q5THK1 Q5THK1 Protein PRR14L PRR14L sp|Q5THK1|PR14L_HUMAN Protein PRR14L OS=Homo sapiens GN=PRR14L PE=1 SV=1 0.999991 50.4449 1.91776E-07 147.93 129.4 147.93 1 S DLLVSSGSNNSLPCGSPKKCNLKGAFVKMSG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX DLLVSSGSNNSLPCGS(1)PK DLLVS(-96.47)S(-90.13)GS(-76.63)NNS(-50.44)LPCGS(50.44)PK 16 3 0.76558 7635.2 0 0 5660.8 0 0 8245.6 0 0 5790.2 0 0 10493 0 0 8475.8 0 0 10835 0 0 9361.5 0 0 6739 0 0 13882 0 0 7227.2 0 0 5348.3 0 0 8295.9 0 0 5980.5 0 0 10516 0 0 8413.1 0 0 10901 0 0 9774.2 0 0 6823.1 0 0 13288 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15076000 15076000 0 0 NaN 2087 1194 1029 1029 742 786 837 924 837 924 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17143 837 924 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17143 837 924 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17143 Q5TZA2 723 Q5TZA2 Q5TZA2 Rootletin CROCC sp|Q5TZA2|CROCC_HUMAN Rootletin OS=Homo sapiens GN=CROCC PE=1 SV=1 0.5 0 0.0231202 62.2 22.179 62.2 1 S EALTKAEAGRVELELSMTKLRAEEASLQDSL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX VELELS(0.5)MT(0.5)K VELELS(0)MT(0)K 6 2 -3.6496 7163.3 0 0 13633 0 0 6910.8 0 0 12681 0 0 9479.8 0 0 7485.7 0 0 9650.3 0 0 10899 0 0 15315 0 0 21884 0 0 6777.4 0 0 12873 0 0 7005 0 0 12995 0 0 9476.2 0 0 7819.2 0 0 9970.1 0 0 11459 0 0 14871 0 0 20859 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9670100 9670100 0 0 NaN 2088 1196 723 723 5092 5428 5780 6424 5780 6424 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22695 5780 6424 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22695 5780 6424 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22695 Q5UIP0 1616 Q5UIP0 Q5UIP0 Telomere-associated protein RIF1 RIF1 sp|Q5UIP0|RIF1_HUMAN Telomere-associated protein RIF1 OS=Homo sapiens GN=RIF1 PE=1 SV=2 0.991275 20.5544 3.41478E-07 154.84 136.94 154.84 1 S SHDYKATSEEDVSIKSPICEKQDESNTVICQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPXXXXXXXXXX ATSEEDVS(0.009)IKS(0.991)PICEK AT(-78.14)S(-63.12)EEDVS(-20.55)IKS(20.55)PICEK 11 3 -0.35728 21214 0 0 38708 0 0 20334 0 0 37985 0 0 18056 0 0 22120 0 0 18722 0 0 29614 0 0 41543 0 0 21659 0 0 20070 0 0 36562 0 0 20499 0 0 38791 0 0 18489 0 0 23015 0 0 19651 0 0 30068 0 0 40023 0 0 21080 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30147000 30147000 0 0 NaN 2089 1197 1616 1616 531 564 605 677 605 677 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14492 605 677 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14492 605 677 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14492 Q5UIP0 1688 Q5UIP0 Q5UIP0 Telomere-associated protein RIF1 RIF1 sp|Q5UIP0|RIF1_HUMAN Telomere-associated protein RIF1 OS=Homo sapiens GN=RIF1 PE=1 SV=2 0.999997 55.0149 1.35124E-22 259.96 240.43 205.92 1 S NLRTRNAIKRLHKRDSFDNCSLGESSKIGIS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX RDS(1)FDNCSLGESSK RDS(55.01)FDNCS(-55.01)LGES(-128.05)S(-153.3)K 3 3 -0.24278 32540 0 0 43911 0 0 32836 0 0 43595 0 0 27611 0 0 33429 0 0 28155 0 0 37820 0 0 48482 0 0 21762 0 0 30792 0 0 41479 0 0 32984 0 0 44618 0 0 28355 0 0 34057 0 0 29190 0 0 38422 0 0 46975 0 0 21367 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 174260000 174260000 0 0 NaN 2090 1197 1688 1688 806;3209 854;3403 910;3637 1002;4033 3637 4033 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11417 910 1002 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13608 910 1002 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13608 Q5UIP0 2161 Q5UIP0 Q5UIP0 Telomere-associated protein RIF1 RIF1 sp|Q5UIP0|RIF1_HUMAN Telomere-associated protein RIF1 OS=Homo sapiens GN=RIF1 PE=1 SV=2 0.901304 9.65439 4.43834E-05 114.9 92.887 114.9 1 S QKLRELDPSLVSANDSPSGMQTRCVWSPLAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPXXXXXXXX ELDPSLVSANDS(0.901)PS(0.098)GMQT(0.001)R ELDPS(-53.37)LVS(-34.21)ANDS(9.65)PS(-9.65)GMQT(-30.77)R 12 3 0.15896 8946.6 0 0 10181 0 0 10629 0 0 8989.9 0 0 12077 0 0 9540.4 0 0 13990 0 0 10201 0 0 10102 0 0 24942 0 0 8472.1 0 0 9610.9 0 0 10628 0 0 9312.1 0 0 12194 0 0 9593.5 0 0 14043 0 0 10958 0 0 10132 0 0 23722 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11402000 11402000 0 0 NaN 2091 1197 2161 2161 1025 1081 1169 1288 1169 1288 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16425 1169 1288 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16425 1169 1288 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16425 Q5UIP0 1542 Q5UIP0 Q5UIP0 Telomere-associated protein RIF1 RIF1 sp|Q5UIP0|RIF1_HUMAN Telomere-associated protein RIF1 OS=Homo sapiens GN=RIF1 PE=1 SV=2 0.995683 24.6572 2.12031E-08 170.32 144.52 170.32 1 S EKLVRGRTRYQTRRASQGLLSSIENSESDSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RAS(0.996)QGLLS(0.003)S(0.001)IENSESDSSEAK RAS(24.66)QGLLS(-24.66)S(-30.39)IENS(-78.13)ES(-110.63)DS(-136.49)S(-139.99)EAK 3 3 -0.8592 11192 0 0 8352.1 0 0 9834.9 0 0 7638.3 0 0 8578.8 0 0 10133 0 0 10115 0 0 10289 0 0 9342 0 0 19450 0 0 10585 0 0 7885.9 0 0 9968.7 0 0 7926.5 0 0 8800.9 0 0 10084 0 0 10201 0 0 10900 0 0 9250.5 0 0 18552 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9462000 9462000 0 0 NaN 2092 1197 1542 1542 3199 3393 3627 4023 3627 4023 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17339 3627 4023 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17339 3627 4023 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17339 Q5UIP0 2393 Q5UIP0 Q5UIP0 Telomere-associated protein RIF1 RIF1 sp|Q5UIP0|RIF1_HUMAN Telomere-associated protein RIF1 OS=Homo sapiens GN=RIF1 PE=1 SV=2 0.998597 28.5248 3.00144E-05 142.92 84.003 142.92 1 S DISEKTVNGIENKSLSPDEERLVSDIIDPVA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX S(0.001)LS(0.999)PDEER S(-28.52)LS(28.52)PDEER 3 2 0.47463 21718 0 0 29831 0 0 21206 0 0 29678 0 0 20417 0 0 21960 0 0 19456 0 0 23903 0 0 34072 0 0 6183.3 0 0 20548 0 0 28179 0 0 21372 0 0 30358 0 0 20766 0 0 22392 0 0 20251 0 0 24088 0 0 32999 0 0 6375.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25642000 25642000 0 0 NaN 2093 1197 2393 2393 3990 4254 4541 5049 4541 5049 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8181 4541 5049 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8181 4541 5049 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8181 Q5UIP0 1579 Q5UIP0 Q5UIP0 Telomere-associated protein RIF1 RIF1 sp|Q5UIP0|RIF1_HUMAN Telomere-associated protein RIF1 OS=Homo sapiens GN=RIF1 PE=1 SV=2 0.908812 9.98539 1.99219E-05 135.95 111.09 135.95 1 S SRKKRSGKWKNKSNESVDIQDQEEKVVKQEC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX S(0.091)NES(0.909)VDIQDQEEK S(-9.99)NES(9.99)VDIQDQEEK 4 3 0.31495 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2094 1197 1579 1579 4041 4310 4599 5107 4599 5107 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11018 4599 5107 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11018 4599 5107 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11018 Q5UIP0 2348 Q5UIP0 Q5UIP0 Telomere-associated protein RIF1 RIF1 sp|Q5UIP0|RIF1_HUMAN Telomere-associated protein RIF1 OS=Homo sapiens GN=RIF1 PE=1 SV=2 0.999729 35.6619 0.015439 62.104 33.886 62.104 1 S LSTLTASEIKTLPIRSPKVSNVKKALRIYHE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPXXXXXXXXXXXXX TLPIRS(1)PK T(-35.66)LPIRS(35.66)PK 6 3 0.23964 17772 0 0 25110 0 0 17772 0 0 27129 0 0 10845 0 0 17541 0 0 9682.6 0 0 19760 0 0 28492 0 0 1818.1 0 0 16817 0 0 23732 0 0 17808 0 0 27578 0 0 11415 0 0 18041 0 0 10427 0 0 19789 0 0 27315 0 0 2169.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28156000 28156000 0 0 NaN 2095 1197 2348 2348 4782 5100 5434 6045 5434 6045 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12414 5434 6045 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12414 5434 6045 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12414 Q5UIP0 782 Q5UIP0 Q5UIP0 Telomere-associated protein RIF1 RIF1 sp|Q5UIP0|RIF1_HUMAN Telomere-associated protein RIF1 OS=Homo sapiens GN=RIF1 PE=1 SV=2 0.998829 29.3447 0.00640509 89.661 60.333 89.661 1 S IDFSPYNIKYQPKVKSPQRPSDWSKKKNEPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX VKS(0.999)PQRPS(0.001)DWSK VKS(29.34)PQRPS(-29.34)DWS(-50.07)K 3 3 -0.83789 39633 0 0 48151 0 0 34749 0 0 51004 0 0 25948 0 0 34539 0 0 27519 0 0 40158 0 0 54998 0 0 10254 0 0 37485 0 0 45502 0 0 35167 0 0 51931 0 0 26900 0 0 35444 0 0 28689 0 0 40373 0 0 53101 0 0 10585 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 51074000 51074000 0 0 NaN 2096 1197 782 782 5150 5487 5845 6497 5845 6497 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11511 5845 6497 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11511 5845 6497 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11511 Q5VSL9 335 Q5VSL9 Q5VSL9 Striatin-interacting protein 1 STRIP1 sp|Q5VSL9|STRP1_HUMAN Striatin-interacting protein 1 OS=Homo sapiens GN=STRIP1 PE=1 SV=1 0.999999 58.6175 5.12825E-16 229 193.26 229 1 S LPEDSIKVIRNMRAASPPASASDLIEQQQKR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX AAS(1)PPASASDLIEQQQK AAS(58.62)PPAS(-58.62)AS(-113.43)DLIEQQQK 3 3 -0.08399 15545 0 0 17305 0 0 16780 0 0 18243 0 0 20930 0 0 17158 0 0 21686 0 0 17550 0 0 18490 0 0 12730 0 0 14715 0 0 16352 0 0 16877 0 0 18657 0 0 21002 0 0 17276 0 0 21951 0 0 17972 0 0 18379 0 0 12393 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 169460000 169460000 0 0 NaN 2097 1198 335 335 71 76 83;84 95;96 83 95 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15390 83 95 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15390 83 95 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15390 Q5VT06 1818 Q5VT06 Q5VT06 Centrosome-associated protein 350 CEP350 sp|Q5VT06|CE350_HUMAN Centrosome-associated protein 350 OS=Homo sapiens GN=CEP350 PE=1 SV=1 0.953346 13.1053 2.16544E-07 164 102.04 164 1 S LDSHSDDDTKDNKATSPGPTDLETRSPSPIS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX AT(0.047)S(0.953)PGPTDLETR AT(-13.11)S(13.11)PGPT(-47.18)DLET(-95.17)R 3 2 -1.9389 19132 0 0 17195 0 0 21726 0 0 17286 0 0 17126 0 0 19571 0 0 16104 0 0 18857 0 0 16713 0 0 8271.8 0 0 18114 0 0 16244 0 0 21670 0 0 17780 0 0 17637 0 0 19522 0 0 16458 0 0 19192 0 0 16465 0 0 8225.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18997000 18997000 0 0 NaN 2098 1199 1818 1818 536 570 611 683 611 683 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10157 611 683 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10157 611 683 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10157 Q5VT25 1651 Q5VT25 Q5VT25 Serine/threonine-protein kinase MRCK alpha CDC42BPA sp|Q5VT25|MRCKA_HUMAN Serine/threonine-protein kinase MRCK alpha OS=Homo sapiens GN=CDC42BPA PE=1 SV=1 0.963165 15.3853 2.21538E-06 155.47 106.87 155.47 1 S ARSSAQNGSALKREFSGGSYSAKRQPMPSPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX EFS(0.963)GGS(0.028)YS(0.009)AK EFS(15.39)GGS(-15.39)Y(-67.34)S(-20.31)AK 3 2 -2.1721 22126 0 0 62701 0 0 24705 0 0 60083 0 0 42786 0 0 21248 0 0 46466 0 0 49526 0 0 62997 0 0 116940 0 0 20946 0 0 59216 0 0 24956 0 0 61227 0 0 42419 0 0 23606 0 0 47574 0 0 52106 0 0 61458 0 0 111260 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 31066000 31066000 0 0 NaN 2099 1200 1651 1651 945 999 1084 1197 1084 1197 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12804 1084 1197 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12804 1084 1197 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12804 Q5VT52 614 Q5VT52 Q5VT52 Regulation of nuclear pre-mRNA domain-containing protein 2 RPRD2 sp|Q5VT52|RPRD2_HUMAN Regulation of nuclear pre-mRNA domain-containing protein 2 OS=Homo sapiens GN=RPRD2 PE=1 SV=1 0.99924 33.1072 0.000121084 111.66 90.201 111.66 1 S SEVSSTSASKASIGQSPGLPSTTFKLPSNSL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPXXXXXX ASIGQS(0.999)PGLPSTTFK AS(-33.11)IGQS(33.11)PGLPS(-35.69)T(-57.56)T(-64.58)FK 6 3 0.12488 14626 0 0 12020 0 0 15672 0 0 13317 0 0 9786 0 0 13539 0 0 9826.5 0 0 11461 0 0 11842 0 0 5433.1 0 0 13844 0 0 11363 0 0 15649 0 0 13598 0 0 10281 0 0 13545 0 0 10056 0 0 11741 0 0 11599 0 0 5381.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 71125000 71125000 0 0 NaN 2100 1201 614 614 465 495 532 596 532 596 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17732 532 596 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17732 532 596 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17732 Q5VT52 665 Q5VT52 Q5VT52 Regulation of nuclear pre-mRNA domain-containing protein 2 RPRD2 sp|Q5VT52|RPRD2_HUMAN Regulation of nuclear pre-mRNA domain-containing protein 2 OS=Homo sapiens GN=RPRD2 PE=1 SV=1 0.922127 11.2659 0.00369017 91.076 68.197 91.076 1 S QSSEVSKPKLESESTSPSLEMKIHNFLKGNP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPXXXXXXXXX LESES(0.008)T(0.069)S(0.922)PS(0.001)LEMK LES(-37.1)ES(-20.55)T(-11.27)S(11.27)PS(-31.4)LEMK 7 3 -0.72423 11714 0 0 8934.1 0 0 11366 0 0 9364.7 0 0 8118.2 0 0 12905 0 0 8858.8 0 0 9889.7 0 0 9588.3 0 0 6012.7 0 0 11083 0 0 8442.2 0 0 11427 0 0 9646 0 0 8441.3 0 0 12751 0 0 9001.9 0 0 10218 0 0 9429.9 0 0 5890.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19804000 19804000 0 0 NaN 2101 1201 665 665 2340 2473 2662 2974 2662 2974 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16394 2662 2974 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16394 2662 2974 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16394 Q5VT52 485 Q5VT52 Q5VT52 Regulation of nuclear pre-mRNA domain-containing protein 2 RPRD2 sp|Q5VT52|RPRD2_HUMAN Regulation of nuclear pre-mRNA domain-containing protein 2 OS=Homo sapiens GN=RPRD2 PE=1 SV=1 0.680193 6.61113 6.30346E-12 187.32 160.19 187.32 1 S TGVSPASRPSPGTPTSPSNLTSGLKTPAPAT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPXXXXXX NTGVSPASRPS(0.001)PGT(0.022)PT(0.148)S(0.68)PS(0.148)NLTSGLK NT(-115.17)GVS(-66.96)PAS(-46.95)RPS(-27.9)PGT(-14.96)PT(-6.61)S(6.61)PS(-6.61)NLT(-37.58)S(-43.85)GLK 17 3 -0.045815 12804 0 0 10483 0 0 12985 0 0 9694.4 0 0 8545.1 0 0 14061 0 0 9960.7 0 0 11816 0 0 10384 0 0 10214 0 0 12117 0 0 9898.4 0 0 13013 0 0 10072 0 0 8954.2 0 0 13890 0 0 10083 0 0 12247 0 0 10228 0 0 9891.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37763000 37763000 0 0 NaN 2102 1201 485 485 2948 3127 3348 3713 3348 3713 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14922 3348 3713 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14922 3348 3713 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14922 Q5VT52 1099 Q5VT52 Q5VT52 Regulation of nuclear pre-mRNA domain-containing protein 2 RPRD2 sp|Q5VT52|RPRD2_HUMAN Regulation of nuclear pre-mRNA domain-containing protein 2 OS=Homo sapiens GN=RPRD2 PE=1 SV=1 1 80.8582 5.36925E-05 126.29 105.91 126.29 1 S PIETLGYHSASNRRMSGEPIQTVESIRVPGK X;X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX RMS(1)GEPIQTVESIR RMS(80.86)GEPIQT(-80.86)VES(-108.07)IR 3 3 -0.68494 25398 0 0 19395 0 0 25734 0 0 18937 0 0 23196 0 0 27105 0 0 17810 0 0 24448 0 0 21574 0 0 28495 0 0 24034 0 0 18319 0 0 25852 0 0 19603 0 0 23617 0 0 26824 0 0 18491 0 0 25485 0 0 21128 0 0 27397 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 75086000 75086000 0 0 NaN 2103 1201 1099 1099 3356 3558;3559 3796;3797 4214;4215 3796 4214 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13298 3796 4214 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13298 3796 4214 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13298 Q5VT52 730 Q5VT52 Q5VT52 Regulation of nuclear pre-mRNA domain-containing protein 2 RPRD2 sp|Q5VT52|RPRD2_HUMAN Regulation of nuclear pre-mRNA domain-containing protein 2 OS=Homo sapiens GN=RPRD2 PE=1 SV=1 0.377641 0.840698 4.79259E-12 197.59 162.42 197.59 S TSIDNIDGTPVRDERSGTPTQDEMMDKPTSS X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.378)GT(0.311)PT(0.311)QDEMMDKPTSSSVDTMSLLSK S(0.84)GT(-0.84)PT(-0.84)QDEMMDKPT(-52.45)S(-71.13)S(-71.13)S(-87.91)VDT(-127.5)MS(-149.2)LLS(-186.59)K 1 4 -1.5135 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2104 1201 730 730 3828 4081 4354 4838 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20267 4354 4838 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20267 4354 4838 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20267 Q5VTD9 43 Q5VTD9 Q5VTD9 Zinc finger protein Gfi-1b GFI1B sp|Q5VTD9|GFI1B_HUMAN Zinc finger protein Gfi-1b OS=Homo sapiens GN=GFI1B PE=1 SV=1 0.953115 13.9237 5.67939E-06 136.49 115.64 136.49 1 S PPALTPVPRDQAPSNSPVLSTLFPNQCLDWT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPPPP DQAPS(0.039)NS(0.953)PVLS(0.004)T(0.004)LFPNQCLDWTNLK DQAPS(-13.92)NS(13.92)PVLS(-23.63)T(-23.63)LFPNQCLDWT(-101.47)NLK 7 3 -0.52075 3999 0 0 21206 0 0 6347.5 0 0 23628 0 0 14416 0 0 6544 0 0 14554 0 0 17841 0 0 22108 0 0 89554 0 0 3792.9 0 0 20046 0 0 6355.6 0 0 23838 0 0 14162 0 0 7632.1 0 0 15015 0 0 20156 0 0 21493 0 0 84738 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 49752000 49752000 0 0 NaN 2105 1202 43 43 778 825 880 971 880 971 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23805 880 971 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23805 880 971 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23805 Q5VTD9 157 Q5VTD9 Q5VTD9 Zinc finger protein Gfi-1b GFI1B sp|Q5VTD9|GFI1B_HUMAN Zinc finger protein Gfi-1b OS=Homo sapiens GN=GFI1B PE=1 SV=1 0.999868 38.796 2.73971E-07 150.59 128.06 150.59 1 S LVPSTEPALDFSLRYSPGMDAYHCVKCNKVF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPXXXXX YS(1)PGMDAYHCVK Y(-38.8)S(38.8)PGMDAY(-74.06)HCVK 2 3 -0.092918 7886.5 0 0 30877 0 0 6334.6 0 0 26800 0 0 20788 0 0 9275.7 0 0 21944 0 0 20068 0 0 29120 0 0 5219.7 0 0 7456.8 0 0 29146 0 0 6646.9 0 0 27485 0 0 20265 0 0 10225 0 0 22478 0 0 19869 0 0 28428 0 0 5379.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28478000 28478000 0 0 NaN 2106 1202 157 157 5429 5782 6172 6869 6172 6869 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13781 6172 6869 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13781 6172 6869 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13781 Q5VTL8 527 Q5VTL8 Q5VTL8 Pre-mRNA-splicing factor 38B PRPF38B sp|Q5VTL8|PR38B_HUMAN Pre-mRNA-splicing factor 38B OS=Homo sapiens GN=PRPF38B PE=1 SV=1 0.999883 39.3032 2.75061E-10 187.01 154.94 109.42 1;2 S HSDSKDQSDKHDRRRSQSIEQESQEKQHKNK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX RRS(1)QS(1)IEQESQEK RRS(39.3)QS(41.3)IEQES(-39.3)QEK 3 4 -0.12583 23418 19493 0 31509 21512 0 23422 19310 0 31329 22771 0 30168 22490 0 24018 18700 0 30690 23148 0 31391 20780 0 35572 22453 0 7189.7 9980.7 0 22159 18445 0 29764 20329 0 23668 19495 0 32061 23239 0 30228 22643 0 24506 18970 0 31348 23512 0 31418 21064 0 34891 22184 0 7496.5 9879 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 196970000 34573000 162400000 0 NaN 2107 1203 527 527 3454;3489;4236 3670;3706;4514 3914;3915;3952;4811 4349;4350;4390;5341 3914 4349 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6914 4811 5341 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9796 4811 5341 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9796 Q5VTL8 529 Q5VTL8 Q5VTL8 Pre-mRNA-splicing factor 38B PRPF38B sp|Q5VTL8|PR38B_HUMAN Pre-mRNA-splicing factor 38B OS=Homo sapiens GN=PRPF38B PE=1 SV=1 0.999926 41.2973 1.99167E-21 271 210.7 109.42 1;2 S DSKDQSDKHDRRRSQSIEQESQEKQHKNKDE X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPXXXXXXX RRS(1)QS(1)IEQESQEK RRS(39.3)QS(41.3)IEQES(-39.3)QEK 5 4 -0.12583 25769 19493 0 44243 21512 0 25508 19310 0 44223 22771 0 35754 22490 0 23809 18700 0 35403 23148 0 36230 20780 0 45815 22453 0 3433.6 9980.7 0 24383 18445 0 41794 20329 0 25824 19495 0 45080 23239 0 35683 22643 0 24939 18970 0 36339 23512 0 35964 21064 0 44764 22184 0 4071.7 9879 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 199580000 37180000 162400000 0 NaN 2108 1203 529 529 3454;3489;4236 3670;3706;4514 3914;3915;4810 4349;4350;5340 3914 4349 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6914 4810 5340 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9319 4810 5340 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9319 Q5VUA4 1713 Q5VUA4 Q5VUA4 Zinc finger protein 318 ZNF318 sp|Q5VUA4|ZN318_HUMAN Zinc finger protein 318 OS=Homo sapiens GN=ZNF318 PE=1 SV=2 0.992063 20.969 3.93247E-12 199.31 181.06 199.31 1 S IWTSSSFQSDTSRDISPEKSELDLGEPGPPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP DIS(0.992)PEKS(0.008)ELDLGEPGPPGVEPPPQLLDIQCK DIS(20.97)PEKS(-20.97)ELDLGEPGPPGVEPPPQLLDIQCK 3 4 1.2572 3763.6 0 0 3552.8 0 0 3463 0 0 3320.6 0 0 3163.4 0 0 3715.2 0 0 3370.2 0 0 4763.8 0 0 3634.9 0 0 69552 0 0 3560.2 0 0 3354.9 0 0 3501 0 0 3430 0 0 3231.1 0 0 3850.4 0 0 3427.8 0 0 6833.6 0 0 3575.4 0 0 65602 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14430000 14430000 0 0 NaN 2109 1204 1713 1713 709 753 803 888 803 888 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23096 803 888 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23096 803 888 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23096 Q5VUA4 464 Q5VUA4 Q5VUA4 Zinc finger protein 318 ZNF318 sp|Q5VUA4|ZN318_HUMAN Zinc finger protein 318 OS=Homo sapiens GN=ZNF318 PE=1 SV=2 1 53.0339 0.0406336 53.034 33.94 53.034 1 S NLYQWGPLPGIPKDNSPLREKFGSFLCHKDN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX DNS(1)PLREK DNS(53.03)PLREK 3 2 -1.0932 32656 0 0 29529 0 0 30980 0 0 31292 0 0 25100 0 0 31576 0 0 25705 0 0 27477 0 0 31897 0 0 4426.2 0 0 30895 0 0 27905 0 0 31221 0 0 32027 0 0 25833 0 0 31595 0 0 26306 0 0 27854 0 0 31210 0 0 4803.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30170000 30170000 0 0 NaN 2110 1204 464 464 768 814 868 958 868 958 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8591 868 958 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8591 868 958 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8591 Q5VUA4 2101 Q5VUA4 Q5VUA4 Zinc finger protein 318 ZNF318 sp|Q5VUA4|ZN318_HUMAN Zinc finger protein 318 OS=Homo sapiens GN=ZNF318 PE=1 SV=2 1 106.003 0.00138528 106 77.357 106 1 S EGERNSPNPRSVRIPSPNILKTGLTENVDRG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX IPS(1)PNILK IPS(106)PNILK 3 2 -0.26325 18682 0 0 21292 0 0 17501 0 0 20055 0 0 9907.6 0 0 16805 0 0 10819 0 0 15707 0 0 20810 0 0 8265.9 0 0 17674 0 0 20107 0 0 17599 0 0 20615 0 0 10525 0 0 16991 0 0 11242 0 0 16047 0 0 20109 0 0 8146.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 64667000 64667000 0 0 NaN 2111 1204 2101 2101 1917 2025 2186 2446 2186 2446 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19555 2186 2446 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19555 2186 2446 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19555 Q5VUA4 1896 Q5VUA4 Q5VUA4 Zinc finger protein 318 ZNF318 sp|Q5VUA4|ZN318_HUMAN Zinc finger protein 318 OS=Homo sapiens GN=ZNF318 PE=1 SV=2 1 89.1443 8.71795E-05 119.68 105.65 119.68 1 S QDTPVKISAPELLLHSPARSAMCLTGSPQEQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX ISAPELLLHS(1)PAR IS(-89.14)APELLLHS(89.14)PAR 10 3 0.30345 4660.4 0 0 6219 0 0 5459.9 0 0 5844.7 0 0 3418.6 0 0 4762.4 0 0 3320.4 0 0 4952.8 0 0 5923.8 0 0 3610.1 0 0 4412.9 0 0 5872.7 0 0 5426.7 0 0 6006.6 0 0 3590.8 0 0 4831.1 0 0 3455.9 0 0 5069.4 0 0 5734.6 0 0 3513.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23512000 23512000 0 0 NaN 2112 1204 1896 1896 1933 2041 2203 2463 2203 2463 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18709 2203 2463 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18709 2203 2463 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18709 Q5VUA4 1267 Q5VUA4 Q5VUA4 Zinc finger protein 318 ZNF318 sp|Q5VUA4|ZN318_HUMAN Zinc finger protein 318 OS=Homo sapiens GN=ZNF318 PE=1 SV=2 0.969595 15.0594 7.99339E-05 124.16 102.86 124.16 1 S NTGIKLQLKEEVKKESPTSSSFGKFSWKKPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX KES(0.97)PT(0.03)SSSFGK KES(15.06)PT(-15.06)S(-37.95)S(-57.06)S(-54.91)FGK 3 3 0.88801 15060 0 0 17192 0 0 15596 0 0 18491 0 0 10252 0 0 14444 0 0 10685 0 0 15303 0 0 18540 0 0 5238.7 0 0 14253 0 0 16248 0 0 15608 0 0 18841 0 0 10733 0 0 14679 0 0 11070 0 0 15475 0 0 17960 0 0 5287 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12499000 12499000 0 0 NaN 2113 1204 1267 1267 2046 2165 2332 2599 2332 2599 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11184 2332 2599 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11184 2332 2599 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11184 Q5VUA4 709 Q5VUA4 Q5VUA4 Zinc finger protein 318 ZNF318 sp|Q5VUA4|ZN318_HUMAN Zinc finger protein 318 OS=Homo sapiens GN=ZNF318 PE=1 SV=2 1 88.3919 0.00992995 88.392 49.638 88.392 1 S PHPPSPVDPYLLTKNSPPFLKSDHPVGHISG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPXXXXXXXXXX NS(1)PPFLK NS(88.39)PPFLK 2 2 0.1687 36126 0 0 29630 0 0 35254 0 0 28082 0 0 18270 0 0 34069 0 0 19023 0 0 25628 0 0 32802 0 0 6095.5 0 0 34181 0 0 27982 0 0 35343 0 0 29024 0 0 19567 0 0 33787 0 0 19705 0 0 26218 0 0 31781 0 0 6332.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 92237000 92237000 0 0 NaN 2114 1204 709 709 2928 3104 3324 3684 3324 3684 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16518 3324 3684 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16518 3324 3684 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16518 Q5VUA4 527 Q5VUA4 Q5VUA4 Zinc finger protein 318 ZNF318 sp|Q5VUA4|ZN318_HUMAN Zinc finger protein 318 OS=Homo sapiens GN=ZNF318 PE=1 SV=2 1 133.944 3.16322E-05 133.94 102.97 133.94 1 S SMLADSTSTQEKRRRSFPDIEDEEKFLYGDE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX RRS(1)FPDIEDEEK RRS(133.94)FPDIEDEEK 3 3 -0.26773 14559 0 0 12011 0 0 14274 0 0 11572 0 0 11367 0 0 15354 0 0 12480 0 0 12030 0 0 12018 0 0 10333 0 0 13776 0 0 11343 0 0 14356 0 0 11970 0 0 11722 0 0 15199 0 0 12638 0 0 12507 0 0 11878 0 0 10008 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11065000 11065000 0 0 NaN 2115 1204 527 527 3441 3655 3897 4326 3897 4326 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12558 3897 4326 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12558 3897 4326 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12558 Q5VUA4 136 Q5VUA4 Q5VUA4 Zinc finger protein 318 ZNF318 sp|Q5VUA4|ZN318_HUMAN Zinc finger protein 318 OS=Homo sapiens GN=ZNF318 PE=1 SV=2 0.995158 23.1335 0.000966453 99.044 30.072 99.044 1 S DGRGDHPGDSGSRRRSPGLCSDSLEKSLRIT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX RRS(0.995)PGLCS(0.005)DSLEK RRS(23.13)PGLCS(-23.13)DS(-52.89)LEK 3 4 -0.47014 12776 0 0 11331 0 0 11672 0 0 11342 0 0 9687.5 0 0 11923 0 0 7625.1 0 0 11294 0 0 12565 0 0 1113 0 0 12086 0 0 10704 0 0 11789 0 0 11654 0 0 9923.6 0 0 11919 0 0 7996 0 0 11387 0 0 12188 0 0 1309.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16054000 16054000 0 0 NaN 2116 1204 136 136 3445 3659 3901 4330 3901 4330 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9884 3901 4330 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9884 3901 4330 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9884 Q5VUA4 39 Q5VUA4 Q5VUA4 Zinc finger protein 318 ZNF318 sp|Q5VUA4|ZN318_HUMAN Zinc finger protein 318 OS=Homo sapiens GN=ZNF318 PE=1 SV=2 0.499958 0 0.0368228 51.971 41.337 51.971 1 S RSGRSSGSSSGPARRSSPPPPPSGSSSRTPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPXXX RS(0.5)S(0.5)PPPPPSGSSSR RS(0)S(0)PPPPPS(-43.72)GS(-43.72)S(-43.72)S(-43.72)R 2 3 -1.6019 1752 0 0 1775.4 0 0 1816.7 0 0 2143 0 0 1761.8 0 0 2742.9 0 0 1950.1 0 0 1987 0 0 1869.7 0 0 1450.3 0 0 1658 0 0 1679.3 0 0 1825.3 0 0 2187.6 0 0 1793.7 0 0 2715.8 0 0 1973.8 0 0 2066.1 0 0 1848.2 0 0 1411.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8785000 8785000 0 0 NaN 2117 1204 39 39 3504 3721 3967 4405 3967 4405 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5410 3967 4405 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5410 3967 4405 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5410 Q5VUA4 40 Q5VUA4 Q5VUA4 Zinc finger protein 318 ZNF318 sp|Q5VUA4|ZN318_HUMAN Zinc finger protein 318 OS=Homo sapiens GN=ZNF318 PE=1 SV=2 0.499958 0 0.0368228 51.971 41.337 51.971 1 S SGRSSGSSSGPARRSSPPPPPSGSSSRTPAR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RS(0.5)S(0.5)PPPPPSGSSSR RS(0)S(0)PPPPPS(-43.72)GS(-43.72)S(-43.72)S(-43.72)R 3 3 -1.6019 1752 0 0 1775.4 0 0 1816.7 0 0 2143 0 0 1761.8 0 0 2742.9 0 0 1950.1 0 0 1987 0 0 1869.7 0 0 1450.3 0 0 1658 0 0 1679.3 0 0 1825.3 0 0 2187.6 0 0 1793.7 0 0 2715.8 0 0 1973.8 0 0 2066.1 0 0 1848.2 0 0 1411.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8785000 8785000 0 0 NaN 2118 1204 40 40 3504 3721 3967 4405 3967 4405 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5410 3967 4405 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5410 3967 4405 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5410 Q5VUA4 2030 Q5VUA4 Q5VUA4 Zinc finger protein 318 ZNF318 sp|Q5VUA4|ZN318_HUMAN Zinc finger protein 318 OS=Homo sapiens GN=ZNF318 PE=1 SV=2 1 73.0194 1.07065E-06 159.01 133.81 159.01 2 S GNLGDMPVDFCTTRVSPAHRSPTVLCQKVCE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPXXX VS(1)PAHRS(0.202)PT(0.798)VLCQK VS(73.02)PAHRS(-5.96)PT(5.96)VLCQK 2 3 -0.52394 0 37320 0 0 41215 0 0 37888 0 0 40240 0 0 17624 0 0 39365 0 0 20618 0 0 34340 0 0 41367 0 0 10914 0 0 35316 0 0 38929 0 0 37876 0 0 41363 0 0 19144 0 0 39454 0 0 21412 0 0 34969 0 0 39936 0 0 11072 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 41351000 0 41351000 0 NaN 2119 1204 2030 2030 5257 5603 5973 6637 5973 6637 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11083 5973 6637 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11083 5973 6637 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11083 Q5VUA4 1856 Q5VUA4 Q5VUA4 Zinc finger protein 318 ZNF318 sp|Q5VUA4|ZN318_HUMAN Zinc finger protein 318 OS=Homo sapiens GN=ZNF318 PE=1 SV=2 0.999936 41.9187 7.25866E-07 145.02 121.54 145.02 1 S LMTGSETPSKVVIKLSPQACSFTKAKLDSFL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPXXXXXXX VVIKLS(1)PQACSFTK VVIKLS(41.92)PQACS(-41.92)FT(-69.34)K 6 3 0.39759 17953 0 0 17635 0 0 19691 0 0 18961 0 0 6989.2 0 0 17661 0 0 6917 0 0 14797 0 0 18605 0 0 11701 0 0 16995 0 0 16667 0 0 19572 0 0 19367 0 0 7852.7 0 0 17747 0 0 7364.5 0 0 15306 0 0 17862 0 0 11361 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18849000 18849000 0 0 NaN 2120 1204 1856 1856 5306 5653 6028 6700 6028 6700 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19350 6028 6700 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19350 6028 6700 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19350 Q5VUB5 422 Q5VUB5 Q5VUB5 Protein FAM171A1 FAM171A1 sp|Q5VUB5|F1711_HUMAN Protein FAM171A1 OS=Homo sapiens GN=FAM171A1 PE=1 SV=1 0.649398 2.69977 4.54436E-07 150.78 124.8 150.78 1 S EGDLHTPMLKLSYSTSQEFSSREELLSCKEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX LSYS(0.002)T(0.349)S(0.649)QEFSSR LS(-59.47)Y(-101.32)S(-25.49)T(-2.7)S(2.7)QEFS(-61.75)S(-81.47)R 6 2 0.34028 11933 0 0 15222 0 0 12185 0 0 15903 0 0 21326 0 0 13371 0 0 22902 0 0 18208 0 0 15919 0 0 32948 0 0 11293 0 0 14384 0 0 12370 0 0 16246 0 0 21118 0 0 13638 0 0 23045 0 0 19069 0 0 16004 0 0 31446 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13128000 13128000 0 0 NaN 2121 1205 422 422 2611 2758 2958 3295 2958 3295 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14532 2958 3295 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14532 2958 3295 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14532 Q5VV41 492 Q5VV41 Q5VV41 Rho guanine nucleotide exchange factor 16 ARHGEF16 sp|Q5VV41|ARHGG_HUMAN Rho guanine nucleotide exchange factor 16 OS=Homo sapiens GN=ARHGEF16 PE=1 SV=1 0.974064 15.7701 0.0318607 58.083 20.294 58.083 1 S QMYTLHTQLDFSKVKSLPLISASRWLLKRGE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(0.974)LPLIS(0.026)ASR S(15.77)LPLIS(-15.77)AS(-38.46)R 1 2 -0.026741 10491 0 0 15281 0 0 11522 0 0 12926 0 0 8623.8 0 0 9765.1 0 0 10960 0 0 12830 0 0 14640 0 0 4365.3 0 0 9930.6 0 0 14422 0 0 11512 0 0 13365 0 0 8959.2 0 0 9975.8 0 0 11145 0 0 12882 0 0 14289 0 0 4407.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 139890000 139890000 0 0 NaN 2122 1206 492 492 3963 4222 4505 5007 4505 5007 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18252 4505 5007 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18252 4505 5007 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18252 Q5VVJ2 110 Q5VVJ2 Q5VVJ2 Histone H2A deubiquitinase MYSM1 MYSM1 sp|Q5VVJ2|MYSM1_HUMAN Histone H2A deubiquitinase MYSM1 OS=Homo sapiens GN=MYSM1 PE=1 SV=1 0.98869 19.4168 1.37681E-08 175.52 139.76 130.06 1 S KYMKSLQKTAKIMVHSPTKPASYSVKWTIEE X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPXXXXX IMVHS(0.989)PT(0.011)KPASYSVK IMVHS(19.42)PT(-19.42)KPAS(-59.44)Y(-61.23)S(-68.02)VK 5 4 -0.57401 20477 0 0 23971 0 0 20391 0 0 19165 0 0 20988 0 0 21830 0 0 22453 0 0 22532 0 0 24058 0 0 5489.7 0 0 19377 0 0 22618 0 0 20548 0 0 20014 0 0 21286 0 0 21781 0 0 22829 0 0 22740 0 0 23670 0 0 5690.6 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 26868000 26868000 0 0 NaN 2123 1207 110 110 1895 2000;2001 2159;2160 2419;2420 2159 2419 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13403 2160 2420 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14593 2160 2420 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14593 Q5VVQ6 129 Q5VVQ6 Q5VVQ6 Ubiquitin thioesterase OTU1 YOD1 sp|Q5VVQ6|OTU1_HUMAN Ubiquitin thioesterase OTU1 OS=Homo sapiens GN=YOD1 PE=1 SV=1 0.779579 5.48609 0.00107687 122.28 72.727 96.171 1 S SGDMLIIEEDQTRPRSSPAFTKRGASSYVRE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX S(0.78)S(0.22)PAFTKR S(5.49)S(-5.49)PAFT(-57.75)KR 1 3 0.72322 18779 0 0 74021 0 0 20568 0 0 69445 0 0 75829 0 0 21691 0 0 74259 0 0 56568 0 0 74043 0 0 7006.8 0 0 17777 0 0 69899 0 0 21281 0 0 70816 0 0 73666 0 0 24324 0 0 75658 0 0 55601 0 0 73067 0 0 7907 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 117390000 117390000 0 0 NaN 2124 1208 129 129 4373;4374 4659;4660 4963;4964 5508;5509 4964 5509 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9130 4963 5508 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11678 4963 5508 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11678 Q5VWG9 199 Q5VWG9 Q5VWG9 Transcription initiation factor TFIID subunit 3 TAF3 sp|Q5VWG9|TAF3_HUMAN Transcription initiation factor TFIID subunit 3 OS=Homo sapiens GN=TAF3 PE=1 SV=1 0.98063 17.0704 6.92942E-05 112.28 90.722 112.28 1 S PEAEELPAMKRPRLLSTKGDTLDVVLLEARE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX LLS(0.981)T(0.019)KGDTLDVVLLEAR LLS(17.07)T(-17.07)KGDT(-39.17)LDVVLLEAR 3 3 0.52918 18150 0 0 10640 0 0 22359 0 0 9433.8 0 0 12975 0 0 21381 0 0 14055 0 0 19148 0 0 9930.7 0 0 58329 0 0 17190 0 0 10045 0 0 22159 0 0 9951.9 0 0 13733 0 0 20980 0 0 14142 0 0 21051 0 0 9973.5 0 0 55367 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 47193000 47193000 0 0 NaN 2125 1210 199 199 2464 2602 2796 3123 2796 3123 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23512 2796 3123 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23512 2796 3123 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23512 Q5VWN6 1541 Q5VWN6 Q5VWN6 Protein FAM208B FAM208B sp|Q5VWN6|F208B_HUMAN Protein FAM208B OS=Homo sapiens GN=FAM208B PE=1 SV=1 0.993044 21.5467 0.000160844 118.37 81.385 118.37 1 S NQPASAAKCTGDFSPSPEKLVKSGNPLQPVS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX CTGDFS(0.007)PS(0.993)PEK CT(-60.09)GDFS(-21.55)PS(21.55)PEK 8 2 -1.1984 8378.6 0 0 11480 0 0 8809.3 0 0 11297 0 0 10422 0 0 9940.2 0 0 10738 0 0 10956 0 0 12261 0 0 7727.9 0 0 7929.9 0 0 10844 0 0 8866.1 0 0 11589 0 0 10487 0 0 10051 0 0 10957 0 0 11183 0 0 12033 0 0 7530.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8381200 8381200 0 0 NaN 2126 1211 1541 1541 625 666 710 786 710 786 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12286 710 786 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12286 710 786 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12286 Q5VWN6 1268 Q5VWN6 Q5VWN6 Protein FAM208B FAM208B sp|Q5VWN6|F208B_HUMAN Protein FAM208B OS=Homo sapiens GN=FAM208B PE=1 SV=1 0.995064 24.0043 0.0530185 49.159 11.388 49.159 1 S EAFDSVFIKQTSLSVSREVSLELSEEDSDID X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPXXXXXXXXXXXXXX QTS(0.001)LS(0.004)VS(0.995)R QT(-40.05)S(-30.53)LS(-24)VS(24)R 7 2 0.54888 12533 0 0 15073 0 0 11323 0 0 15002 0 0 15504 0 0 13015 0 0 15704 0 0 14666 0 0 16302 0 0 2595.5 0 0 11855 0 0 14238 0 0 11522 0 0 15376 0 0 15490 0 0 13160 0 0 15992 0 0 14725 0 0 16060 0 0 2783.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8131500 8131500 0 0 NaN 2127 1211 1268 1268 3160 3352 3583 3973 3583 3973 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8734 3583 3973 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8734 3583 3973 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8734 Q5VWN6 2037 Q5VWN6 Q5VWN6 Protein FAM208B FAM208B sp|Q5VWN6|F208B_HUMAN Protein FAM208B OS=Homo sapiens GN=FAM208B PE=1 SV=1 0.869916 8.31809 0.0191176 70.027 42.417 70.027 1 S KISEAPFLHPAPRSRSPLLVTVVESDPRPQG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.128)RS(0.87)PLLVT(0.001)VVES(0.001)DPRPQGQPR S(-8.32)RS(8.32)PLLVT(-28.81)VVES(-30.33)DPRPQGQPR 3 3 0.85732 10794 0 0 12822 0 0 10558 0 0 13954 0 0 15187 0 0 9196.2 0 0 15723 0 0 12787 0 0 15467 0 0 23857 0 0 10213 0 0 12119 0 0 10703 0 0 14182 0 0 15146 0 0 9520.1 0 0 15972 0 0 13406 0 0 15272 0 0 22760 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 33482000 33482000 0 0 NaN 2128 1211 2037 2037 4295 4579 4879 5416 4879 5416 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15617 4879 5416 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15617 4879 5416 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15617 Q5VWQ0 81 Q5VWQ0 Q5VWQ0 Round spermatid basic protein 1 RSBN1 sp|Q5VWQ0|RSBN1_HUMAN Round spermatid basic protein 1 OS=Homo sapiens GN=RSBN1 PE=1 SV=2 1 84.8736 0.00523277 84.874 39.737 84.874 1 S EEPDKEGKEKPHAGVSPRGVKRQRRSSSGGS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX EKPHAGVS(1)PR EKPHAGVS(84.87)PR 8 3 0.55092 23759 0 0 27351 0 0 22529 0 0 26182 0 0 19854 0 0 26055 0 0 14857 0 0 21737 0 0 29943 0 0 3274.7 0 0 22477 0 0 25831 0 0 22714 0 0 26952 0 0 20249 0 0 26074 0 0 15777 0 0 22070 0 0 28905 0 0 3586.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 60136000 60136000 0 0 NaN 2129 1212 81 81 1017 1073 1160 1278 1160 1278 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6591 1160 1278 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6591 1160 1278 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6591 Q5VWQ0 554 Q5VWQ0 Q5VWQ0 Round spermatid basic protein 1 RSBN1 sp|Q5VWQ0|RSBN1_HUMAN Round spermatid basic protein 1 OS=Homo sapiens GN=RSBN1 PE=1 SV=2 1 52.4633 0.0443786 52.463 14.85 52.463 1 S IPTADMPKSPFKRRRSMNEIKNLQYLPRTSE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX RRS(1)MNEIK RRS(52.46)MNEIK 3 3 -1.9012 14094 0 0 14332 0 0 12495 0 0 15677 0 0 15993 0 0 13606 0 0 15312 0 0 14103 0 0 14478 0 0 2234.8 0 0 13331 0 0 13547 0 0 12715 0 0 15981 0 0 16013 0 0 13741 0 0 15596 0 0 14195 0 0 14321 0 0 2430.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17248000 17248000 0 0 NaN 2130 1212 554 554 3444 3658 3900 4329 3900 4329 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7492 3900 4329 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7492 3900 4329 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7492 Q5VY43 953 Q5VY43 Q5VY43 Platelet endothelial aggregation receptor 1 PEAR1 sp|Q5VY43|PEAR1_HUMAN Platelet endothelial aggregation receptor 1 OS=Homo sapiens GN=PEAR1 PE=1 SV=1 0.990032 19.9705 1.73085E-05 129.37 111.58 129.37 1 S PRESSYMEMKGPPSGSPPRQPPQFWDSQRRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPXX GPPS(0.01)GS(0.99)PPRQPPQFWDSQR GPPS(-19.97)GS(19.97)PPRQPPQFWDS(-83.4)QR 6 3 0.28694 19660 0 0 23449 0 0 18768 0 0 20846 0 0 58702 0 0 20331 0 0 60026 0 0 36994 0 0 22579 0 0 25669 0 0 18600 0 0 22137 0 0 19441 0 0 21555 0 0 57197 0 0 20659 0 0 60013 0 0 37236 0 0 23867 0 0 25027 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 42138000 42138000 0 0 NaN 2131 1213 953 953 1554 1636 1769 1965;1966 1769 1966 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14732 1769 1966 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14732 1769 1966 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14732 Q5VZ89 1387 Q5VZ89 Q5VZ89 DENN domain-containing protein 4C DENND4C sp|Q5VZ89|DEN4C_HUMAN DENN domain-containing protein 4C OS=Homo sapiens GN=DENND4C PE=1 SV=2 0.771668 5.29016 0.000303281 113.61 45.178 113.61 1 S EIKRASGDVQTMKISSVPNSLSKRNVSLTRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX IS(0.228)S(0.772)VPNSLSK IS(-5.29)S(5.29)VPNS(-41.34)LS(-45.18)K 3 2 0.29354 27840 0 0 27145 0 0 26178 0 0 24926 0 0 18615 0 0 29495 0 0 19750 0 0 25010 0 0 29186 0 0 19281 0 0 26337 0 0 25630 0 0 26365 0 0 25802 0 0 19362 0 0 29341 0 0 20308 0 0 25842 0 0 28398 0 0 18734 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26590000 26590000 0 0 NaN 2132 1214 1387 1387 1953 2064 2228 2489 2228 2489 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15717 2228 2489 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15717 2228 2489 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15717 Q5VZ89 810 Q5VZ89 Q5VZ89 DENN domain-containing protein 4C DENND4C sp|Q5VZ89|DEN4C_HUMAN DENN domain-containing protein 4C OS=Homo sapiens GN=DENND4C PE=1 SV=2 0.906017 10.0894 0.000214084 127.37 83.274 127.37 1 S DRGEKRQKHFPERSCSFSSESRAGMLLKKSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX S(0.089)CS(0.906)FS(0.005)SESR S(-10.09)CS(10.09)FS(-22.48)S(-39.11)ES(-82.98)R 3 2 -0.44741 13677 0 0 13918 0 0 15041 0 0 13468 0 0 11851 0 0 15165 0 0 12551 0 0 13811 0 0 13356 0 0 4302.7 0 0 12947 0 0 13146 0 0 15030 0 0 13883 0 0 12225 0 0 15116 0 0 12764 0 0 14036 0 0 13144 0 0 4371.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9064100 9064100 0 0 NaN 2133 1214 810 810 3646 3876 4130 4589 4130 4589 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7553 4130 4589 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7553 4130 4589 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7553 Q5VZ89 947 Q5VZ89 Q5VZ89 DENN domain-containing protein 4C DENND4C sp|Q5VZ89|DEN4C_HUMAN DENN domain-containing protein 4C OS=Homo sapiens GN=DENND4C PE=1 SV=2 0.732081 4.36564 0.000559702 125.97 74.903 125.97 1 S SRDLKTVSKDLRNKRSSLYGIAKVVQREDVE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX S(0.732)S(0.268)LYGIAK S(4.37)S(-4.37)LY(-52.04)GIAK 1 2 -0.26868 26994 0 0 27088 0 0 27317 0 0 27153 0 0 24467 0 0 27437 0 0 24460 0 0 27428 0 0 28396 0 0 8870 0 0 25545 0 0 25590 0 0 27453 0 0 27880 0 0 25001 0 0 27506 0 0 25006 0 0 27780 0 0 27851 0 0 8986.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 32738000 32738000 0 0 NaN 2134 1214 947 947 4371 4656 4960 5505 4960 5505 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16534 4960 5505 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16534 4960 5505 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16534 Q5VZ89 889 Q5VZ89 Q5VZ89 DENN domain-containing protein 4C DENND4C sp|Q5VZ89|DEN4C_HUMAN DENN domain-containing protein 4C OS=Homo sapiens GN=DENND4C PE=1 SV=2 0.499861 0 0.0033092 92.95 72.136 92.95 S SRTCMSESTWNPEHRSSPVPEMLEESQELLE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.5)S(0.5)PVPEMLEESQELLEPVVDDVPK S(0)S(0)PVPEMLEES(-32.55)QELLEPVVDDVPK 1 3 0.15139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2135 1214 889 889 4405 4693 4997 5544 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24121 4997 5544 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24121 4997 5544 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24121 Q5VZ89 890 Q5VZ89 Q5VZ89 DENN domain-containing protein 4C DENND4C sp|Q5VZ89|DEN4C_HUMAN DENN domain-containing protein 4C OS=Homo sapiens GN=DENND4C PE=1 SV=2 0.499861 0 0.0033092 92.95 72.136 92.95 S RTCMSESTWNPEHRSSPVPEMLEESQELLEP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.5)S(0.5)PVPEMLEESQELLEPVVDDVPK S(0)S(0)PVPEMLEES(-32.55)QELLEPVVDDVPK 2 3 0.15139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2136 1214 890 890 4405 4693 4997 5544 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24121 4997 5544 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24121 4997 5544 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24121 Q5VZ89 1089 Q5VZ89 Q5VZ89 DENN domain-containing protein 4C DENND4C sp|Q5VZ89|DEN4C_HUMAN DENN domain-containing protein 4C OS=Homo sapiens GN=DENND4C PE=1 SV=2 0.914765 12.211 5.57255E-06 152.7 105.5 152.7 1 S FKQQTPSRTHKERSTSLSALVRSSPHGSLGS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX S(0.03)T(0.055)S(0.915)LSALVR S(-14.85)T(-12.21)S(12.21)LS(-35.18)ALVR 3 2 0.49075 26894 0 0 6892.8 0 0 24338 0 0 7769 0 0 15298 0 0 23799 0 0 18141 0 0 15640 0 0 6542.6 0 0 5342.9 0 0 25439 0 0 6516.4 0 0 24549 0 0 8181.1 0 0 16088 0 0 23047 0 0 18012 0 0 16165 0 0 6947.6 0 0 5393 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 31518000 31518000 0 0 NaN 2137 1214 1089 1089 4521 4820 5135 5703 5135 5703 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16655 5135 5703 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16655 5135 5703 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16655 Q5VZK9 967 Q5VZK9 Q5VZK9 Leucine-rich repeat-containing protein 16A LRRC16A sp|Q5VZK9|LR16A_HUMAN Leucine-rich repeat-containing protein 16A OS=Homo sapiens GN=LRRC16A PE=1 SV=1 0.467452 0 0.00928108 79.635 51.089 79.635 S HIEDPPFPSLRQEKRSSGFISELPSEEGKKL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPXX RS(0.467)S(0.467)GFIS(0.065)ELPSEEGK RS(0)S(0)GFIS(-8.56)ELPS(-58.59)EEGK 2 3 1.6879 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2138 1215 967 967 3495 3712 3958 4396 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16421 3958 4396 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16421 3958 4396 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16421 Q5VZK9 968 Q5VZK9 Q5VZK9 Leucine-rich repeat-containing protein 16A LRRC16A sp|Q5VZK9|LR16A_HUMAN Leucine-rich repeat-containing protein 16A OS=Homo sapiens GN=LRRC16A PE=1 SV=1 0.467452 0 0.00928108 79.635 51.089 79.635 S IEDPPFPSLRQEKRSSGFISELPSEEGKKLE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RS(0.467)S(0.467)GFIS(0.065)ELPSEEGK RS(0)S(0)GFIS(-8.56)ELPS(-58.59)EEGK 3 3 1.6879 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2139 1215 968 968 3495 3712 3958 4396 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16421 3958 4396 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16421 3958 4396 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16421 Q5VZL5 1241 Q5VZL5 Q5VZL5 Zinc finger MYM-type protein 4 ZMYM4 sp|Q5VZL5|ZMYM4_HUMAN Zinc finger MYM-type protein 4 OS=Homo sapiens GN=ZMYM4 PE=1 SV=1 0.963675 15.1095 0.0254861 61.989 47.754 61.989 1 S EQGDLKCGGVEQASSSPRSDPLGSTQDHALS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX CGGVEQAS(0.03)S(0.007)S(0.964)PR CGGVEQAS(-15.11)S(-21.64)S(15.11)PR 10 2 -1.5792 7920.9 0 0 8268.1 0 0 7266 0 0 9163.9 0 0 7095.9 0 0 9447.3 0 0 6927.2 0 0 9368.6 0 0 10047 0 0 4240 0 0 7492.7 0 0 7815.7 0 0 7351.7 0 0 9359.1 0 0 7211.6 0 0 9463.9 0 0 7144.8 0 0 9528.1 0 0 9780.8 0 0 4209.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11928000 11928000 0 0 NaN 2140 1216 1241 1241 605 644 686 762 686 762 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6194 686 762 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6194 686 762 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6194 Q5VZL5 162 Q5VZL5 Q5VZL5 Zinc finger MYM-type protein 4 ZMYM4 sp|Q5VZL5|ZMYM4_HUMAN Zinc finger MYM-type protein 4 OS=Homo sapiens GN=ZMYM4 PE=1 SV=1 0.999819 37.4277 0.000223724 107.35 78.372 107.35 1 S VFKSIRKDFSLVRENSKETFSGKEKNRDLTY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX ENS(1)KETFSGK ENS(37.43)KET(-37.43)FS(-71.06)GK 3 3 0.97334 54306 0 0 33624 0 0 49867 0 0 35213 0 0 42180 0 0 47504 0 0 41629 0 0 45046 0 0 37667 0 0 12285 0 0 51371 0 0 31773 0 0 50373 0 0 36256 0 0 43247 0 0 47060 0 0 42293 0 0 45649 0 0 37334 0 0 12611 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 41817000 41817000 0 0 NaN 2141 1216 162 162 1079 1137 1225 1347 1225 1347 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10775 1225 1347 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10775 1225 1347 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10775 Q5VZL5 122 Q5VZL5 Q5VZL5 Zinc finger MYM-type protein 4 ZMYM4 sp|Q5VZL5|ZMYM4_HUMAN Zinc finger MYM-type protein 4 OS=Homo sapiens GN=ZMYM4 PE=1 SV=1 0.999361 31.9439 1.13287E-22 256.53 217.96 256.53 1 S TDDSLEVERRVTQHESDNENEIQIQNKLKKD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPXXXX VT(0.001)QHES(0.999)DNENEIQIQNK VT(-31.94)QHES(31.94)DNENEIQIQNK 6 3 -0.44519 21192 0 0 22653 0 0 22701 0 0 25194 0 0 20750 0 0 21472 0 0 23493 0 0 23154 0 0 24795 0 0 23971 0 0 20059 0 0 21414 0 0 22753 0 0 25654 0 0 21213 0 0 21755 0 0 23818 0 0 23882 0 0 24410 0 0 23107 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 70560000 70560000 0 0 NaN 2142 1216 122 122 3562;5295 3782;5642 4032;6014 4479;6680 6014 6680 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11893 6014 6680 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11893 6014 6680 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11893 Q5W0B1 210 Q5W0B1 Q5W0B1 RING finger protein 219 RNF219 sp|Q5W0B1|RN219_HUMAN RING finger protein 219 OS=Homo sapiens GN=RNF219 PE=1 SV=1 1 94.8816 0.0022866 94.882 58.597 94.882 1 S LVRENLRLKAEVDNRSPQKFGRFAVAALQSK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPXXXXXXXXXXXX LKAEVDNRS(1)PQK LKAEVDNRS(94.88)PQK 9 4 0.2423 31887 0 0 18611 0 0 31600 0 0 18487 0 0 28603 0 0 26800 0 0 33530 0 0 28016 0 0 19040 0 0 823.69 0 0 30172 0 0 17580 0 0 31809 0 0 19123 0 0 29260 0 0 26509 0 0 33497 0 0 28079 0 0 19401 0 0 1424 0 0 1 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PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16658 5624 6251 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16658 5624 6251 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16658 Q5XPI4 675 Q5XPI4 Q5XPI4 E3 ubiquitin-protein ligase RNF123 RNF123 sp|Q5XPI4|RN123_HUMAN E3 ubiquitin-protein ligase RNF123 OS=Homo sapiens GN=RNF123 PE=1 SV=1 0.964019 16.2528 0.000116324 124.04 107.84 124.04 1 S AVGGPLPLPRPGWLSSPTLGRANRFLSTAAV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX PGWLS(0.023)S(0.964)PT(0.013)LGR PGWLS(-16.25)S(16.25)PT(-18.66)LGR 6 2 0.0020007 14418 0 0 21196 0 0 14076 0 0 21314 0 0 13342 0 0 15803 0 0 16033 0 0 19901 0 0 24244 0 0 13748 0 0 13642 0 0 20024 0 0 14189 0 0 21789 0 0 13629 0 0 16164 0 0 16416 0 0 20218 0 0 23574 0 0 13406 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 35135000 35135000 0 0 NaN 2145 1218 675 675 2978 3157 3380 3748 3380 3748 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19162 3380 3748 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19162 3380 3748 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19162 Q63ZY3 375 Q63ZY3 Q63ZY3 KN motif and ankyrin repeat domain-containing protein 2 KANK2 sp|Q63ZY3|KANK2_HUMAN KN motif and ankyrin repeat domain-containing protein 2 OS=Homo sapiens GN=KANK2 PE=1 SV=1 1 46.3563 0.0403691 46.356 28.867 46.356 1 S YGTGLRALAMPGRPESPPVFRSQEVVETMCP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPXXXXXXXXXX ALAMPGRPES(1)PPVFR ALAMPGRPES(46.36)PPVFR 10 3 -1.5617 12137 0 0 6108.5 0 0 13423 0 0 7129.1 0 0 12559 0 0 13795 0 0 13222 0 0 10954 0 0 8055.4 0 0 7917.5 0 0 11490 0 0 5776.3 0 0 13433 0 0 7364.7 0 0 12801 0 0 13509 0 0 13285 0 0 11336 0 0 8167.4 0 0 7708.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 48120000 48120000 0 0 NaN 2146 1219 375 375 284 305 326 364 326 364 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17307 326 364 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17307 326 364 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17307 Q63ZY6 260 Q63ZY6 Q63ZY6 Putative methyltransferase NSUN5C NSUN5P2 sp|Q63ZY6|NSN5C_HUMAN Putative methyltransferase NSUN5C OS=Homo sapiens GN=NSUN5P2 PE=5 SV=2 0.998493 28.1171 0.020515 79.311 49.983 79.311 2 S TSASQAKASAPERTPSPAPKRKKRAKSCSRC X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPXXXXXXXXXXX AS(0.023)APERT(0.978)PS(0.998)PAPK AS(-16.55)APERT(16.55)PS(28.12)PAPK 9 3 -1.11 0 12782 0 0 13103 0 0 13472 0 0 12362 0 0 9648.3 0 0 13905 0 0 9836.3 0 0 12124 0 0 12813 0 0 2962.9 0 0 12098 0 0 12374 0 0 13479 0 0 12763 0 0 10022 0 0 13852 0 0 10085 0 0 12319 0 0 12517 0 0 3070.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 13602000 0 13602000 0 NaN 2147 1220 260 260 434 463 498 558 498 558 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7778 498 558 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7778 498 558 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7778 Q63ZY6;Q96P11 143;327 Q63ZY6 Q63ZY6 Putative methyltransferase NSUN5C;Probable 28S rRNA (cytosine-C(5))-methyltransferase NSUN5P2;NSUN5 sp|Q63ZY6|NSN5C_HUMAN Putative methyltransferase NSUN5C OS=Homo sapiens GN=NSUN5P2 PE=5 SV=2;sp|Q96P11|NSUN5_HUMAN Probable 28S rRNA (cytosine-C(5))-methyltransferase OS=Homo sapiens GN=NSUN5 PE=1 SV=2 0.965472 14.4657 0.0154208 75.969 48.107 75.969 1 S GMPSRQLEEPGAGTPSPVRLHALAGFQQRAL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPXXXXXXXXXXXX QLEEPGAGT(0.035)PS(0.965)PVR QLEEPGAGT(-14.47)PS(14.47)PVR 11 2 0.78313 13107 0 0 12467 0 0 14014 0 0 12835 0 0 11391 0 0 13047 0 0 10911 0 0 12454 0 0 15115 0 0 9892.3 0 0 12406 0 0 11779 0 0 14026 0 0 13160 0 0 11712 0 0 13079 0 0 11245 0 0 12814 0 0 14735 0 0 9603 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17061000 17061000 0 0 NaN 2148 1220 143 143 3063 3249 3476 3850 3476 3850 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11572 3476 3850 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11572 3476 3850 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11572 Q9Y4E1;Q641Q2 333;333 Q9Y4E1 Q9Y4E1 WASH complex subunit FAM21C;WASH complex subunit FAM21A FAM21C;FAM21A sp|Q9Y4E1|FA21C_HUMAN WASH complex subunit FAM21C OS=Homo sapiens GN=FAM21C PE=1 SV=3;sp|Q641Q2|FA21A_HUMAN WASH complex subunit FAM21A OS=Homo sapiens GN=FAM21A PE=2 SV=3 0.914575 10.2963 1.32818E-10 186.06 164.51 186.06 1 S KPRKTLKEKKERRTPSDDEEDNLFAPPKLTD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPXXX RT(0.085)PS(0.915)DDEEDNLFAPPK RT(-10.3)PS(10.3)DDEEDNLFAPPK 4 3 0.012957 23189 0 0 13544 0 0 22489 0 0 12053 0 0 15057 0 0 23213 0 0 16127 0 0 19057 0 0 13301 0 0 26537 0 0 21940 0 0 12786 0 0 22596 0 0 12646 0 0 15731 0 0 22767 0 0 16287 0 0 20076 0 0 13244 0 0 25429 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 21098000 21098000 0 0 NaN 2149 1221 333 333 3524 3741 3987 4426;4427 3987 4426 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16221 3987 4426 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16221 3987 4426 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16221 Q9Y4E1;Q641Q2;Q5SNT6 284;284;196 Q9Y4E1 Q9Y4E1 WASH complex subunit FAM21C;WASH complex subunit FAM21A;WASH complex subunit FAM21B FAM21C;FAM21A;FAM21B sp|Q9Y4E1|FA21C_HUMAN WASH complex subunit FAM21C OS=Homo sapiens GN=FAM21C PE=1 SV=3;sp|Q641Q2|FA21A_HUMAN WASH complex subunit FAM21A OS=Homo sapiens GN=FAM21A PE=2 SV=3;sp|Q5SNT6|FA21B_HUMAN WASH complex subunit FAM21B OS=Homo sapiens GN=FAM21B PE=2 SV= 0.99967 35.1002 1.127E-05 136.33 107.11 136.33 1 S EEDIEDIEENTRPKRSRPTSFADELAARIKG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX S(1)RPTSFADELAAR S(35.1)RPT(-35.1)S(-46.72)FADELAAR 1 3 -1.8036 11758 0 0 5808.5 0 0 13638 0 0 6061 0 0 7038.2 0 0 13565 0 0 7276.7 0 0 9176.7 0 0 6449.3 0 0 3253.8 0 0 11133 0 0 5488.5 0 0 13544 0 0 6328.4 0 0 7534.7 0 0 13213 0 0 7373 0 0 9473 0 0 6398.6 0 0 3276.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 34311000 34311000 0 0 NaN 2150 1221 284 284 4272 4551 4850 5382 4850 5382 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14795 4850 5382 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14795 4850 5382 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14795 Q659C4 340 Q659C4 Q659C4 La-related protein 1B LARP1B sp|Q659C4|LAR1B_HUMAN La-related protein 1B OS=Homo sapiens GN=LARP1B PE=1 SV=2 0.988843 19.4756 0.0185795 70.441 31.432 70.441 1 S FCSHTESAPNSPRIGSPLSPKKNSETSILQA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX IGS(0.989)PLS(0.011)PK IGS(19.48)PLS(-19.48)PK 3 2 0.17059 13713 0 0 15254 0 0 15033 0 0 15261 0 0 18407 0 0 13731 0 0 18314 0 0 16786 0 0 16170 0 0 6508.7 0 0 12981 0 0 14410 0 0 15103 0 0 15644 0 0 18477 0 0 13882 0 0 18588 0 0 16916 0 0 16046 0 0 6517.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13033000 13033000 0 0 NaN 2151 1222 340 340 1845 1948 2104 2358 2104 2358 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15212 2104 2358 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15212 2104 2358 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15212 Q659C4 343 Q659C4 Q659C4 La-related protein 1B LARP1B sp|Q659C4|LAR1B_HUMAN La-related protein 1B OS=Homo sapiens GN=LARP1B PE=1 SV=2 0.952603 13.0316 0.0333184 58.63 24.424 58.63 1 S HTESAPNSPRIGSPLSPKKNSETSILQAMSR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPXXXXXXXXXXXXX IGS(0.047)PLS(0.953)PK IGS(-13.03)PLS(13.03)PK 6 2 -0.073961 12847 0 0 13522 0 0 11242 0 0 11283 0 0 9969.3 0 0 10639 0 0 9964.9 0 0 11944 0 0 14109 0 0 8482.2 0 0 12151 0 0 12761 0 0 11397 0 0 11711 0 0 10196 0 0 10725 0 0 10257 0 0 12185 0 0 13746 0 0 8263.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8791500 8791500 0 0 NaN 2152 1222 343 343 1845 1948 2105 2359 2105 2359 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15893 2105 2359 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15893 2105 2359 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15893 Q659C4 60 Q659C4 Q659C4 La-related protein 1B LARP1B sp|Q659C4|LAR1B_HUMAN La-related protein 1B OS=Homo sapiens GN=LARP1B PE=1 SV=2 1 106.759 1.23103E-07 153.88 138.72 153.88 1 S KENRETKLNGPGENVSEDEAQSSNQRKRANK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPXXXXX LNGPGENVS(1)EDEAQSSNQR LNGPGENVS(106.76)EDEAQS(-106.76)S(-113.17)NQR 9 3 -1.4697 13012 0 0 13435 0 0 12754 0 0 14877 0 0 14155 0 0 14011 0 0 14730 0 0 14187 0 0 16482 0 0 10899 0 0 12312 0 0 12700 0 0 12875 0 0 15173 0 0 14292 0 0 14105 0 0 15014 0 0 14552 0 0 16189 0 0 10591 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12317000 12317000 0 0 NaN 2153 1222 60 60 2475 2614 2808 3135 2808 3135 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10151 2808 3135 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10151 2808 3135 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10151 Q66K14 275 Q66K14 Q66K14 TBC1 domain family member 9B TBC1D9B sp|Q66K14|TBC9B_HUMAN TBC1 domain family member 9B OS=Homo sapiens GN=TBC1D9B PE=1 SV=3 1 61.7795 0.0198546 61.78 12.985 61.78 1 S EDKALPRPIRPHRNISALKRDLDARAKNECY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX NIS(1)ALKR NIS(61.78)ALKR 3 3 -0.53985 14078 0 0 10773 0 0 15161 0 0 11578 0 0 9985.1 0 0 17083 0 0 12023 0 0 12429 0 0 12975 0 0 1553.1 0 0 13325 0 0 10182 0 0 15145 0 0 11927 0 0 10468 0 0 16822 0 0 12167 0 0 12694 0 0 12763 0 0 1750.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11927000 11927000 0 0 NaN 2154 1223 275 275 2831 3001 3214 3567 3214 3567 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12874 3214 3567 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12874 3214 3567 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12874 Q66K14 442 Q66K14 Q66K14 TBC1 domain family member 9B TBC1D9B sp|Q66K14|TBC9B_HUMAN TBC1 domain family member 9B OS=Homo sapiens GN=TBC1D9B PE=1 SV=3 0.9958 26.11 0.0347246 50.397 30.291 50.397 1 S SEQPASPASPLSSRQSFCAQEAPTASQGLLK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP QS(0.996)FCAQEAPT(0.002)AS(0.002)QGLLK QS(26.11)FCAQEAPT(-27.52)AS(-26.11)QGLLK 2 3 4.1775 6877.9 0 0 8157 0 0 6615.8 0 0 8511.1 0 0 7706.5 0 0 6870.7 0 0 7879.4 0 0 8168.7 0 0 8701.2 0 0 12138 0 0 6507.2 0 0 7707.6 0 0 6690.5 0 0 8691 0 0 7759.4 0 0 6999.2 0 0 8034.7 0 0 8509.3 0 0 8550.6 0 0 11619 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9931100 9931100 0 0 NaN 2155 1223 442 442 3134 3325 3555 3940 3555 3940 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17552 3555 3940 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17552 3555 3940 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17552 Q66K74 640 Q66K74 Q66K74 Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain MAP1S sp|Q66K74|MAP1S_HUMAN Microtubule-associated protein 1S OS=Homo sapiens GN=MAP1S PE=1 SV=2 0.991187 20.5373 1.17558E-17 220.67 194.54 220.67 2 S ELPLAASSIPRPRTPSPESHRSPAEGSERLS X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX ALELPLAASS(0.006)IPRPRT(0.994)PS(0.991)PES(0.009)HR ALELPLAAS(-47.85)S(-22.4)IPRPRT(22.4)PS(20.54)PES(-20.54)HR 18 4 0.58821 0 4700.6 0 0 4065.2 0 0 5091.1 0 0 5009.8 0 0 4473.3 0 0 4141.9 0 0 3625.5 0 0 5021.2 0 0 5836 0 0 7684.9 0 0 4449.4 0 0 3845.6 0 0 5094.8 0 0 5072.3 0 0 4566.1 0 0 4215.9 0 0 3791.7 0 0 5234.1 0 0 5664.6 0 0 7352.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 24536000 0 24536000 0 NaN 2156 1224 640 640 288 309 330 368 330 368 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18903 330 368 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18903 330 368 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18903 Q66K74 759 Q66K74 Q66K74 Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain MAP1S sp|Q66K74|MAP1S_HUMAN Microtubule-associated protein 1S OS=Homo sapiens GN=MAP1S PE=1 SV=2 0.989122 20.0442 8.73745E-17 246.12 219.16 246.12 1 S EFEHRKAVPMAPAPASPGSSNDSSARSQERA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPPXXXXX AVPMAPAPAS(0.989)PGS(0.01)S(0.001)NDSSAR AVPMAPAPAS(20.04)PGS(-20.04)S(-29.59)NDS(-74.84)S(-80.97)AR 10 2 0.30543 20624 0 0 16346 0 0 24179 0 0 16947 0 0 14982 0 0 23156 0 0 14698 0 0 17682 0 0 18833 0 0 16347 0 0 19529 0 0 15445 0 0 24029 0 0 17463 0 0 15746 0 0 22896 0 0 15088 0 0 18441 0 0 18407 0 0 15802 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 35108000 35108000 0 0 NaN 2157 1224 759 759 560;2020 597;2138 638;2304 712;2571 638 712 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12254 638 712 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12254 638 712 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12254 Q66K74 592 Q66K74 Q66K74 Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain MAP1S sp|Q66K74|MAP1S_HUMAN Microtubule-associated protein 1S OS=Homo sapiens GN=MAP1S PE=1 SV=2 0.945116 12.3629 2.97928E-08 140.97 131.58 140.97 1 S ANGPRSPPSLRCGEASPPSAACGSPASQLVA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP CGEAS(0.945)PPS(0.055)AACGSPASQLVATPSLELGPIPAGEEK CGEAS(12.36)PPS(-12.36)AACGS(-44.66)PAS(-75.05)QLVAT(-100.57)PS(-109.55)LELGPIPAGEEK 5 4 -0.42474 7722.7 0 0 8033.8 0 0 10539 0 0 7389.2 0 0 6816.7 0 0 8770.7 0 0 6893.7 0 0 8292.5 0 0 7630.7 0 0 45509 0 0 7318.2 0 0 7585.5 0 0 10405 0 0 7648.5 0 0 7139.2 0 0 8809.3 0 0 7033.7 0 0 9707.7 0 0 7498 0 0 43044 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 20265000 20265000 0 0 NaN 2158 1224 592 592 604 643 685 760;761 685 761 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22427 685 761 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22427 685 761 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22427 Q66K74 657 Q66K74 Q66K74 Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain MAP1S sp|Q66K74|MAP1S_HUMAN Microtubule-associated protein 1S OS=Homo sapiens GN=MAP1S PE=1 SV=2 0.999744 35.9197 0.000685225 128.57 10.688 128.57 1 S ESHRSPAEGSERLSLSPLRGGEAGPDASPTV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX LSLS(1)PLR LS(-35.92)LS(35.92)PLR 4 2 0.19024 19221 0 0 11534 0 0 17165 0 0 11626 0 0 5798.5 0 0 16149 0 0 6428.5 0 0 10952 0 0 11645 0 0 1410.2 0 0 18180 0 0 10896 0 0 17264 0 0 12005 0 0 6569.3 0 0 15923 0 0 6656.3 0 0 11230 0 0 11269 0 0 1581.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 450710000 450710000 0 0 NaN 2159 1224 657 657 2561 2705 2903 3237 2903 3237 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18626 2903 3237 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18626 2903 3237 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18626 Q66K74 729 Q66K74 Q66K74 Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain MAP1S sp|Q66K74|MAP1S_HUMAN Microtubule-associated protein 1S OS=Homo sapiens GN=MAP1S PE=1 SV=2 0.5 0 5.36339E-08 163.71 142.25 163.71 1 S EAGLSLPLRGPRARRSASPHDVDLCLVSPCE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.5)AS(0.5)PHDVDLCLVSPCEFEHR S(0)AS(0)PHDVDLCLVS(-131.96)PCEFEHR 1 3 -1.6948 5283.2 0 0 4874.7 0 0 5079.9 0 0 5335.1 0 0 5330.9 0 0 5848.3 0 0 4366.1 0 0 4933.6 0 0 5549 0 0 15420 0 0 4998.5 0 0 4607.6 0 0 5128.2 0 0 5458 0 0 5382.4 0 0 5856.7 0 0 4523 0 0 5448.8 0 0 5425 0 0 14634 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7241300 7241300 0 0 NaN 2160 1224 729 729 3613 3841 4094 4551 4094 4551 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17946 4094 4551 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17946 4094 4551 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17946 Q66K74 731 Q66K74 Q66K74 Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain MAP1S sp|Q66K74|MAP1S_HUMAN Microtubule-associated protein 1S OS=Homo sapiens GN=MAP1S PE=1 SV=2 0.5 0 5.36339E-08 163.71 142.25 163.71 1 S GLSLPLRGPRARRSASPHDVDLCLVSPCEFE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.5)AS(0.5)PHDVDLCLVSPCEFEHR S(0)AS(0)PHDVDLCLVS(-131.96)PCEFEHR 3 3 -1.6948 5283.2 0 0 4874.7 0 0 5079.9 0 0 5335.1 0 0 5330.9 0 0 5848.3 0 0 4366.1 0 0 4933.6 0 0 5549 0 0 15420 0 0 4998.5 0 0 4607.6 0 0 5128.2 0 0 5458 0 0 5382.4 0 0 5856.7 0 0 4523 0 0 5448.8 0 0 5425 0 0 14634 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7241300 7241300 0 0 NaN 2161 1224 731 731 3613 3841 4094 4551 4094 4551 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17946 4094 4551 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17946 4094 4551 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17946 Q66PJ3 225 Q66PJ3 Q66PJ3 ADP-ribosylation factor-like protein 6-interacting protein 4 ARL6IP4 sp|Q66PJ3|AR6P4_HUMAN ADP-ribosylation factor-like protein 6-interacting protein 4 OS=Homo sapiens GN=ARL6IP4 PE=1 SV=2 0.407174 1.48058 0.0496045 41.227 21.649 41.227 S KKSRKDTSRNCSASTSQGRKASTAPGAEASP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX NCS(0.218)AS(0.085)T(0.29)S(0.407)QGRK NCS(-2.72)AS(-6.78)T(-1.48)S(1.48)QGRK 7 3 0.38842 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2162 1225 225 225 2784 2953 3163 3514 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5401 3163 3514 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5401 3163 3514 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5401 Q66PJ3 332 Q66PJ3 Q66PJ3 ADP-ribosylation factor-like protein 6-interacting protein 4 ARL6IP4 sp|Q66PJ3|AR6P4_HUMAN ADP-ribosylation factor-like protein 6-interacting protein 4 OS=Homo sapiens GN=ARL6IP4 PE=1 SV=2 1 182.148 2.00462E-11 208.59 179.26 208.59 1 S QVEALPGPSLDQWHRSAGEEEDGPVLTDEQK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(1)AGEEEDGPVLTDEQK S(182.15)AGEEEDGPVLT(-182.15)DEQK 1 3 -1.0197 83845 0 0 60367 0 0 83002 0 0 58345 0 0 100840 0 0 78701 0 0 102140 0 0 69890 0 0 62111 0 0 14010 0 0 79336 0 0 57015 0 0 83848 0 0 60357 0 0 101260 0 0 77893 0 0 102810 0 0 70869 0 0 62983 0 0 14809 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 193650000 193650000 0 0 NaN 2163 1225 332 332 3583 3806 4059 4514 4059 4514 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13311 4059 4514 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13311 4059 4514 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13311 Q676U5 287 Q676U5 Q676U5 Autophagy-related protein 16-1 ATG16L1 sp|Q676U5|A16L1_HUMAN Autophagy-related protein 16-1 OS=Homo sapiens GN=ATG16L1 PE=1 SV=2 0.944897 12.7128 1.88955E-11 198.67 179.12 198.67 1 S AGGLLDSITNIFGRRSVSSFPVPQDNVDTHP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.945)VS(0.051)S(0.005)FPVPQDNVDTHPGSGK S(12.71)VS(-12.71)S(-23.21)FPVPQDNVDT(-116.72)HPGS(-164.97)GK 1 3 -0.049861 11959 0 0 15591 0 0 11071 0 0 15676 0 0 12055 0 0 13184 0 0 22387 0 0 21601 0 0 16181 0 0 17661 0 0 11313 0 0 14729 0 0 11231 0 0 16050 0 0 12315 0 0 13465 0 0 22122 0 0 21873 0 0 16229 0 0 17130 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 46789000 46789000 0 0 NaN 2164 1226 287 287 4574 4879 5197 5772 5197 5772 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15099 5197 5772 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15099 5197 5772 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15099 Q684P5 558 Q684P5 Q684P5 Rap1 GTPase-activating protein 2 RAP1GAP2 sp|Q684P5|RPGP2_HUMAN Rap1 GTPase-activating protein 2 OS=Homo sapiens GN=RAP1GAP2 PE=1 SV=2 0.902726 9.67557 0.0388513 43.084 8.706 43.084 1 S FSPPVVAATVKNQSRSPIKRRSGLFPRLHTG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX NQS(0.097)RS(0.903)PIK NQS(-9.68)RS(9.68)PIK 5 3 -0.17284 16929 0 0 9450.7 0 0 15660 0 0 9382.8 0 0 18500 0 0 16878 0 0 16577 0 0 14189 0 0 9517.3 0 0 2466 0 0 16014 0 0 8927.4 0 0 15873 0 0 9758.6 0 0 18572 0 0 16554 0 0 16773 0 0 14411 0 0 9690.2 0 0 2650.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10745000 10745000 0 0 NaN 2165 1227 558 558 2898 3072 3290 3647 3290 3647 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6567 3290 3647 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6567 3290 3647 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6567 Q684P5 9 Q684P5 Q684P5 Rap1 GTPase-activating protein 2 RAP1GAP2 sp|Q684P5|RPGP2_HUMAN Rap1 GTPase-activating protein 2 OS=Homo sapiens GN=RAP1GAP2 PE=1 SV=2 0.902141 9.64672 3.99311E-05 128.96 93.548 128.96 1 S _______MFGRKRSVSFGGFGWIDKTMLASL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX S(0.098)VS(0.902)FGGFGWIDK S(-9.65)VS(9.65)FGGFGWIDK 3 3 0.47329 5689.9 0 0 2947 0 0 6232.1 0 0 2286.6 0 0 7132.9 0 0 5590.4 0 0 7705.2 0 0 5616.4 0 0 3130.9 0 0 11518 0 0 5386.2 0 0 2780.2 0 0 6256.3 0 0 2441.2 0 0 7189.1 0 0 5478.1 0 0 7690.5 0 0 5979.7 0 0 3283.2 0 0 10976 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21020000 21020000 0 0 NaN 2166 1227 9 9 4565 4869 5186 5758 5186 5758 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23786 5186 5758 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23786 5186 5758 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23786 Q68DK7 205 Q68DK7 Q68DK7 Male-specific lethal 1 homolog MSL1 sp|Q68DK7|MSL1_HUMAN Male-specific lethal 1 homolog OS=Homo sapiens GN=MSL1 PE=1 SV=3 0.999612 34.1085 4.67783E-07 138.55 122.78 138.55 1 S GTLAASEGRWKSMRKSPLGGGGGSGASSQAA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(1)PLGGGGGSGASSQAACLK S(34.11)PLGGGGGS(-34.11)GAS(-75.4)S(-97.7)QAACLK 1 3 1.1163 25843 0 0 22828 0 0 27360 0 0 20778 0 0 16641 0 0 27415 0 0 17639 0 0 22357 0 0 21532 0 0 8520.3 0 0 24460 0 0 21553 0 0 27333 0 0 21566 0 0 17538 0 0 27136 0 0 18014 0 0 22878 0 0 21080 0 0 8540.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 66835000 66835000 0 0 NaN 2167 1228 205 205 4127 4400 4691 5207 4691 5207 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13408 4691 5207 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13408 4691 5207 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13408 Q68E01 502 Q68E01 Q68E01 Integrator complex subunit 3 INTS3 sp|Q68E01|INT3_HUMAN Integrator complex subunit 3 OS=Homo sapiens GN=INTS3 PE=1 SV=1 0.994636 25.692 7.89998E-05 115.98 96.903 114.72 1 S RAMLREKFPEFCSSPSPPVEVKIEEPVSMEM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPXXXXXXXXX EKFPEFCS(0.003)S(0.003)PS(0.995)PPVEVK EKFPEFCS(-25.69)S(-25.69)PS(25.69)PPVEVK 11 4 0.21277 11230 0 0 9944.4 0 0 11512 0 0 11322 0 0 11029 0 0 11018 0 0 11905 0 0 13001 0 0 11641 0 0 26277 0 0 10627 0 0 9402 0 0 11572 0 0 11536 0 0 11233 0 0 11131 0 0 12069 0 0 13756 0 0 11498 0 0 25044 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 37423000 37423000 0 0 NaN 2168 1229 502 502 1014;1298 1070;1369 1157;1473 1275;1633 1157 1275 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18818 1473 1633 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21142 1157 1275 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18818 Q68EM7 575 Q68EM7 Q68EM7 Rho GTPase-activating protein 17 ARHGAP17 sp|Q68EM7|RHG17_HUMAN Rho GTPase-activating protein 17 OS=Homo sapiens GN=ARHGAP17 PE=1 SV=1 0.996199 24.1848 1.6919E-25 264.52 252.99 264.52 1 S SSAGILEQGPSPGDGSPPKPKDPVSAAVPAP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX AESSSGGGTVPSSAGILEQGPS(0.004)PGDGS(0.996)PPKPK AES(-239.64)S(-239.88)S(-235.75)GGGT(-217.39)VPS(-183.79)S(-177.43)AGILEQGPS(-24.18)PGDGS(24.18)PPKPK 27 4 0.20311 8772.5 0 0 4515.9 0 0 10217 0 0 5425 0 0 7213.7 0 0 11052 0 0 8264.1 0 0 7684.6 0 0 5659.7 0 0 11130 0 0 8306.5 0 0 4271.2 0 0 10170 0 0 5605.1 0 0 7510.3 0 0 10806 0 0 8290.4 0 0 8174.1 0 0 5694.9 0 0 10658 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28156000 28156000 0 0 NaN 2169 1230 575 575 163 171 184 208 184 208 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15322 184 208 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15322 184 208 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15322 Q68EM7 676 Q68EM7 Q68EM7 Rho GTPase-activating protein 17 ARHGAP17 sp|Q68EM7|RHG17_HUMAN Rho GTPase-activating protein 17 OS=Homo sapiens GN=ARHGAP17 PE=1 SV=1 0.941872 12.2234 2.3336E-12 203.82 176.98 203.82 1 S QHPPSLSPKPPTRSPSPPTQHTGQPPGQPSA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.056)PS(0.942)PPT(0.002)QHTGQPPGQPSAPSQLSAPR S(-12.22)PS(12.22)PPT(-27.49)QHT(-76.83)GQPPGQPS(-162.74)APS(-169.74)QLS(-179.23)APR 3 3 0.22167 8204 0 0 6994.4 0 0 7592 0 0 5144.8 0 0 7974.5 0 0 8745.6 0 0 9892.4 0 0 8982.8 0 0 7220.4 0 0 6457.6 0 0 7760.8 0 0 6596.8 0 0 7688.1 0 0 5453.2 0 0 8094.6 0 0 8620.6 0 0 9904.3 0 0 9195.8 0 0 7237.7 0 0 6288.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29208000 29208000 0 0 NaN 2170 1230 676 676 4190 4465 4759 5284 4759 5284 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10632 4759 5284 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10632 4759 5284 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10632 Q68EM7 161 Q68EM7 Q68EM7 Rho GTPase-activating protein 17 ARHGAP17 sp|Q68EM7|RHG17_HUMAN Rho GTPase-activating protein 17 OS=Homo sapiens GN=ARHGAP17 PE=1 SV=1 0.499529 0 6.59193E-11 182.52 149.57 182.52 S LDWDSVRARWNQAHKSSGTNFQGLPSKIDTL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(0.5)S(0.5)GT(0.001)NFQGLPSK S(0)S(0)GT(-27.24)NFQGLPS(-163.02)K 1 3 -0.037173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2171 1230 161 161 4356 4642 4946 5491 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14853 4946 5491 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14853 4946 5491 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14853 Q68EM7 162 Q68EM7 Q68EM7 Rho GTPase-activating protein 17 ARHGAP17 sp|Q68EM7|RHG17_HUMAN Rho GTPase-activating protein 17 OS=Homo sapiens GN=ARHGAP17 PE=1 SV=1 0.499529 0 6.59193E-11 182.52 149.57 182.52 S DWDSVRARWNQAHKSSGTNFQGLPSKIDTLK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.5)S(0.5)GT(0.001)NFQGLPSK S(0)S(0)GT(-27.24)NFQGLPS(-163.02)K 2 3 -0.037173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2172 1230 162 162 4356 4642 4946 5491 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14853 4946 5491 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14853 4946 5491 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14853 Q69YH5 710 Q69YH5 Q69YH5 Cell division cycle-associated protein 2 CDCA2 sp|Q69YH5|CDCA2_HUMAN Cell division cycle-associated protein 2 OS=Homo sapiens GN=CDCA2 PE=1 SV=2 0.999654 37.0453 2.15609E-16 245.71 205.48 245.71 1 S KNKSESENEPKAGTDSPVSCASVTEERVASD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPXXXX AGTDS(1)PVSCASVTEER AGT(-38.29)DS(37.05)PVS(-37.05)CAS(-66.15)VT(-71.03)EER 5 2 -0.063218 6353.9 0 0 8674.9 0 0 8473.2 0 0 8668.9 0 0 8087.1 0 0 8432.5 0 0 8962.6 0 0 7990.4 0 0 9811.5 0 0 4515 0 0 6020.4 0 0 8194.8 0 0 8407.1 0 0 8897.5 0 0 8242.8 0 0 8465.8 0 0 9104.3 0 0 8168.2 0 0 9645 0 0 4436.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7935900 7935900 0 0 NaN 2173 1231 710 710 232 246 264 295 264 295 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10081 264 295 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10081 264 295 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10081 Q69YH5 756 Q69YH5 Q69YH5 Cell division cycle-associated protein 2 CDCA2 sp|Q69YH5|CDCA2_HUMAN Cell division cycle-associated protein 2 OS=Homo sapiens GN=CDCA2 PE=1 SV=2 1 70.4884 0.0185536 70.488 11.063 70.488 1 S AGGQNAENLCQFFKISPDLNIKCERKDDFLG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPXXXXXXXXX IS(1)PDLNIK IS(70.49)PDLNIK 2 2 0.41878 14437 0 0 17173 0 0 13977 0 0 17126 0 0 10159 0 0 12877 0 0 11548 0 0 13903 0 0 19396 0 0 21960 0 0 13659 0 0 16223 0 0 14057 0 0 17519 0 0 10562 0 0 13151 0 0 11903 0 0 14568 0 0 18806 0 0 21000 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9414800 9414800 0 0 NaN 2174 1231 756 756 1946 2057 2220 2481 2220 2481 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18458 2220 2481 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18458 2220 2481 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18458 Q69YN4 1579 Q69YN4 Q69YN4 Protein virilizer homolog KIAA1429 sp|Q69YN4|VIR_HUMAN Protein virilizer homolog OS=Homo sapiens GN=KIAA1429 PE=1 SV=2 0.999372 32.0149 4.01344E-10 190.35 153.82 190.35 1 S DLHSELERSFLSEPSSPGRTKTTKGFKLGKH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX SFLSEPS(0.001)S(0.999)PGR S(-143.4)FLS(-70.32)EPS(-32.01)S(32.01)PGR 8 2 0.34873 15448 0 0 22195 0 0 16270 0 0 21378 0 0 14630 0 0 15260 0 0 14992 0 0 18520 0 0 22005 0 0 12352 0 0 14620 0 0 20962 0 0 16316 0 0 21902 0 0 14955 0 0 15633 0 0 15435 0 0 18822 0 0 21415 0 0 12060 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 314850000 314850000 0 0 NaN 2175 1232 1579 1579 3748 3988 4252 4727 4252 4727 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14621 4252 4727 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14621 4252 4727 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14621 Q69YQ0 385 Q69YQ0 Q69YQ0 Cytospin-A SPECC1L sp|Q69YQ0|CYTSA_HUMAN Cytospin-A OS=Homo sapiens GN=SPECC1L PE=1 SV=2 0.698659 3.66502 2.20762E-07 148.1 119.69 148.1 1 S ESEGIPSIERSRKGSSGNASEVSVACLTERI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPX KGS(0.3)S(0.699)GNAS(0.001)EVSVACLTER KGS(-3.67)S(3.67)GNAS(-28.92)EVS(-59.42)VACLT(-118.02)ER 4 3 0.23872 13355 0 0 13998 0 0 14136 0 0 15221 0 0 13611 0 0 13724 0 0 15326 0 0 14679 0 0 14706 0 0 12266 0 0 12640 0 0 13230 0 0 14186 0 0 15529 0 0 13867 0 0 13858 0 0 15501 0 0 15056 0 0 14537 0 0 11890 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 57018000 57018000 0 0 NaN 2176 1233 385 385 2079 2199 2368 2638 2368 2638 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14139 2368 2638 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14139 2368 2638 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14139 Q6BDS2 1103 Q6BDS2 Q6BDS2 UHRF1-binding protein 1 UHRF1BP1 sp|Q6BDS2|URFB1_HUMAN UHRF1-binding protein 1 OS=Homo sapiens GN=UHRF1BP1 PE=1 SV=1 0.85706 7.92158 1.51579E-07 141.21 94.323 141.21 1 S GGAARLRFFSMKRTVSQQSFDGVSLDSSGPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP T(0.138)VS(0.857)QQS(0.005)FDGVSLDSSGPEDR T(-7.92)VS(7.92)QQS(-22.67)FDGVS(-110.25)LDS(-125.49)S(-129.77)GPEDR 3 3 -0.64689 4750.3 0 0 7547.1 0 0 5246 0 0 6355.7 0 0 6714.2 0 0 5388.9 0 0 6747.9 0 0 7238 0 0 7064.5 0 0 22105 0 0 4496.9 0 0 7122.7 0 0 5272 0 0 6583 0 0 6727.7 0 0 5509.5 0 0 6875.8 0 0 7854.7 0 0 6957.1 0 0 20982 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17101000 17101000 0 0 NaN 2177 1234 1103 1103 5019 5351 5703 6334 5703 6334 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16657 5703 6334 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16657 5703 6334 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16657 Q6DN90 180 Q6DN90 Q6DN90 IQ motif and SEC7 domain-containing protein 1 IQSEC1 sp|Q6DN90|IQEC1_HUMAN IQ motif and SEC7 domain-containing protein 1 OS=Homo sapiens GN=IQSEC1 PE=1 SV=1 1 82.0687 0.00614586 82.069 67.862 82.069 1 S RMSRRIVLSNMRMQFSFEGPEKVHSSYFEGK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX MQFS(1)FEGPEK MQFS(82.07)FEGPEK 4 3 -0.24783 2847.4 0 0 6663.2 0 0 3557.9 0 0 7652.7 0 0 3973.8 0 0 3646.3 0 0 4143.5 0 0 4448.9 0 0 9039.8 0 0 4521.6 0 0 2697 0 0 6300.1 0 0 3547.2 0 0 7732.8 0 0 4015.1 0 0 3852.3 0 0 4343.7 0 0 4567.7 0 0 8711.9 0 0 4360.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9777000 9777000 0 0 NaN 2178 1236 180 180 2730 2895 3104 3451 3104 3451 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19756 3104 3451 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19756 3104 3451 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19756 Q6DN90 417 Q6DN90 Q6DN90 IQ motif and SEC7 domain-containing protein 1 IQSEC1 sp|Q6DN90|IQEC1_HUMAN IQ motif and SEC7 domain-containing protein 1 OS=Homo sapiens GN=IQSEC1 PE=1 SV=1 0.999995 52.7433 0.000344692 110.14 57.021 110.14 1 S KRQSAYERSLGGQQGSPKHGPHSGAPKSLPR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX SLGGQQGS(1)PK S(-52.74)LGGQQGS(52.74)PK 8 2 2.2979 16342 0 0 53343 0 0 14143 0 0 53737 0 0 18525 0 0 15599 0 0 17129 0 0 31677 0 0 57046 0 0 4891.7 0 0 15456 0 0 50394 0 0 14419 0 0 54539 0 0 18559 0 0 17548 0 0 18596 0 0 31299 0 0 54594 0 0 5339.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23478000 23478000 0 0 NaN 2179 1236 417 417 3936 4195 4477 4976 4477 4976 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8964 4477 4976 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8964 4477 4976 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8964 Q6GYQ0 773 Q6GYQ0 Q6GYQ0 Ral GTPase-activating protein subunit alpha-1 RALGAPA1 sp|Q6GYQ0|RGPA1_HUMAN Ral GTPase-activating protein subunit alpha-1 OS=Homo sapiens GN=RALGAPA1 PE=1 SV=1 0.981731 17.3029 7.3098E-18 232.37 213.33 232.37 1 S DDAQILPRSTRVRHFSQSEETGNEVFGALNE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP HFS(0.982)QS(0.018)EETGNEVFGALNEEQPLPR HFS(17.3)QS(-17.3)EET(-61.35)GNEVFGALNEEQPLPR 3 3 -0.17557 2498.6 0 0 3713.3 0 0 3319.6 0 0 3948.3 0 0 3060.8 0 0 2551.8 0 0 3550.7 0 0 5026 0 0 4086.4 0 0 29792 0 0 2367.4 0 0 3509.2 0 0 3293.2 0 0 4017.3 0 0 3128.8 0 0 2707.2 0 0 3605.5 0 0 5843.2 0 0 4009.3 0 0 28169 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14337000 14337000 0 0 NaN 2180 1237 773 773 1710 1803 1947 2171 1947 2171 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19518 1947 2171 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19518 1947 2171 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19518 Q6GYQ0 740 Q6GYQ0 Q6GYQ0 Ral GTPase-activating protein subunit alpha-1 RALGAPA1 sp|Q6GYQ0|RGPA1_HUMAN Ral GTPase-activating protein subunit alpha-1 OS=Homo sapiens GN=RALGAPA1 PE=1 SV=1 0.968576 15.5822 1.43632E-17 250.05 182.85 250.05 1 S PGQAPMRQRSATTTGSPGTEKARSIVRQKTV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX SAT(0.001)T(0.004)T(0.027)GS(0.969)PGTEK S(-46.04)AT(-29.68)T(-24.33)T(-15.58)GS(15.58)PGT(-66.99)EK 7 2 -0.55316 15840 0 0 18236 0 0 16212 0 0 18129 0 0 12466 0 0 16569 0 0 14092 0 0 14250 0 0 18533 0 0 3149.6 0 0 14990 0 0 17227 0 0 16260 0 0 18596 0 0 12899 0 0 16655 0 0 14388 0 0 14479 0 0 18099 0 0 3295.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12378000 12378000 0 0 NaN 2181 1237 740 740 3635 3865 4119 4576 4119 4576 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7351 4119 4576 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7351 4119 4576 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7351 Q6IAA8 27 Q6IAA8 Q6IAA8 Ragulator complex protein LAMTOR1 LAMTOR1 sp|Q6IAA8|LTOR1_HUMAN Ragulator complex protein LAMTOR1 OS=Homo sapiens GN=LAMTOR1 PE=1 SV=2 0.86772 8.17213 0.00610595 85.734 68.854 85.734 1 S SDQDREERKLLLDPSSPPTKALNGAEPNYHS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX KLLLDPS(0.132)S(0.868)PPTK KLLLDPS(-8.17)S(8.17)PPT(-39.42)K 8 3 -0.20146 8260.1 0 0 8028.1 0 0 9731.8 0 0 10156 0 0 8460.1 0 0 9501.5 0 0 7565.6 0 0 9354.1 0 0 10667 0 0 7031.7 0 0 7821.7 0 0 7596 0 0 9697.5 0 0 10288 0 0 8650.7 0 0 9564.5 0 0 7829 0 0 9600.4 0 0 10394 0 0 6837.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7007400 7007400 0 0 NaN 2182 1238 27 27 2117 2238 2411 2687 2411 2687 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17741 2411 2687 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17741 2411 2687 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17741 Q6IBW4 284 Q6IBW4 Q6IBW4 Condensin-2 complex subunit H2 NCAPH2 sp|Q6IBW4|CNDH2_HUMAN Condensin-2 complex subunit H2 OS=Homo sapiens GN=NCAPH2 PE=1 SV=1 0.998946 29.7666 0.0106452 81.335 59.292 81.335 1 S EASAPKAALEPKESRSPQQSAALPRRYMLRE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPXXXXXX S(0.999)PQQS(0.001)AALPR S(29.77)PQQS(-29.77)AALPR 1 2 0.6512 15110 0 0 11989 0 0 15093 0 0 11161 0 0 14538 0 0 15099 0 0 15694 0 0 14356 0 0 12532 0 0 3680.2 0 0 14298 0 0 11321 0 0 15194 0 0 11574 0 0 14799 0 0 14956 0 0 15833 0 0 14540 0 0 12500 0 0 3797.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16640000 16640000 0 0 NaN 2183 1239 284 284 4158 4432 4723 5242 4723 5242 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9006 4723 5242 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9006 4723 5242 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9006 Q6ICG6 362 Q6ICG6 Q6ICG6 Uncharacterized protein KIAA0930 KIAA0930 sp|Q6ICG6|K0930_HUMAN Uncharacterized protein KIAA0930 OS=Homo sapiens GN=KIAA0930 PE=1 SV=1 0.999434 32.469 0.0012739 108.7 64.379 108.7 1 S LRSRSLSGTGRSLVGSWLKLNRADGNFLLYA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX S(0.001)LVGS(0.999)WLK S(-32.47)LVGS(32.47)WLK 5 2 -0.64182 96263 0 0 6324.7 0 0 103510 0 0 5420.3 0 0 12032 0 0 114380 0 0 17325 0 0 43818 0 0 8378.9 0 0 65224 0 0 91116 0 0 5969.6 0 0 102700 0 0 7371.3 0 0 17678 0 0 109020 0 0 17136 0 0 48653 0 0 8646.9 0 0 62430 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 50581000 50581000 0 0 NaN 2184 1240 362 362 4017 4283 4571 5079 4571 5079 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22782 4571 5079 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22782 4571 5079 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22782 Q6IN85 741 Q6IN85 Q6IN85 Serine/threonine-protein phosphatase 4 regulatory subunit 3A SMEK1 sp|Q6IN85|P4R3A_HUMAN Serine/threonine-protein phosphatase 4 regulatory subunit 3A OS=Homo sapiens GN=SMEK1 PE=1 SV=1 0.970477 15.9124 0.01152 66.289 45.336 66.289 1 S EEKEVLLKTNLSGRQSPSFKLSLSSGTKTNL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX TNLS(0.004)GRQS(0.97)PS(0.025)FK T(-38.01)NLS(-23.34)GRQS(15.91)PS(-15.91)FK 8 3 -0.050671 20291 0 0 12503 0 0 21771 0 0 12409 0 0 21174 0 0 20244 0 0 20700 0 0 17993 0 0 11871 0 0 5233.2 0 0 19206 0 0 11810 0 0 21829 0 0 12872 0 0 21508 0 0 19924 0 0 20852 0 0 18293 0 0 12088 0 0 5344.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29552000 29552000 0 0 NaN 2185 1241 741 741 4806 5126 5465 6081 5465 6081 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11412 5465 6081 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11412 5465 6081 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11412 Q6IN85 774 Q6IN85 Q6IN85 Serine/threonine-protein phosphatase 4 regulatory subunit 3A SMEK1 sp|Q6IN85|P4R3A_HUMAN Serine/threonine-protein phosphatase 4 regulatory subunit 3A OS=Homo sapiens GN=SMEK1 PE=1 SV=1 0.523948 0.55808 7.37595E-08 141.68 119.44 141.68 1 S QSSTTNLPGSPGSPGSPGSPGSPGSVPKNTS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPXXX TNLTSQSSTTNLPGSPGS(0.003)PGS(0.524)PGS(0.461)PGS(0.012)PGS(0.001)VPK T(-101.02)NLT(-94.74)S(-90.56)QS(-86.23)S(-81.75)T(-77.13)T(-77.13)NLPGS(-36.81)PGS(-22.66)PGS(0.56)PGS(-0.56)PGS(-16.47)PGS(-30.1)VPK 21 4 0.76651 11917 0 0 12000 0 0 12338 0 0 11362 0 0 11884 0 0 13567 0 0 14854 0 0 12747 0 0 11028 0 0 20263 0 0 11278 0 0 11332 0 0 12399 0 0 11741 0 0 12125 0 0 13528 0 0 14873 0 0 13429 0 0 11044 0 0 19375 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 31623000 31623000 0 0 NaN 2186 1241 774 774 4807 5127 5466 6082;6083 5466 6082 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15234 5466 6082 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15234 5466 6082 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15234 Q6IQ49 278 Q6IQ49 Q6IQ49 Protein SDE2 homolog SDE2 sp|Q6IQ49|SDE2_HUMAN Protein SDE2 homolog OS=Homo sapiens GN=SDE2 PE=1 SV=1 0.999825 37.5566 2.28783E-12 210.43 170.77 210.43 1 S PSGSQRARVVNTDHGSPEQLQIPVTDSGRHI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPXX VVNTDHGS(1)PEQLQIPVTDSGR VVNT(-37.56)DHGS(37.56)PEQLQIPVT(-140.13)DS(-159.06)GR 8 3 -0.20572 12704 0 0 10384 0 0 16285 0 0 15246 0 0 9675.1 0 0 13344 0 0 10609 0 0 14899 0 0 13514 0 0 12863 0 0 12035 0 0 9837.3 0 0 16113 0 0 15327 0 0 10225 0 0 13504 0 0 10834 0 0 15273 0 0 13211 0 0 12457 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 57368000 57368000 0 0 NaN 2187 1242 278 278 5308 5656 6032 6704 6032 6704 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15422 6032 6704 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15422 6032 6704 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15422 Q6JBY9 116 Q6JBY9 Q6JBY9 CapZ-interacting protein RCSD1 sp|Q6JBY9|CPZIP_HUMAN CapZ-interacting protein OS=Homo sapiens GN=RCSD1 PE=1 SV=1 0.99551 31.3482 0.0437012 49.618 33.853 49.618 1;2 S LPGASPKSPGLKAMVSPFHSPPSTPSSPGVR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP AMVS(0.996)PFHS(0.793)PPS(0.072)T(0.048)PS(0.044)S(0.048)PGVR AMVS(31.35)PFHS(10.55)PPS(-10.55)T(-12.34)PS(-12.69)S(-12.34)PGVR 4 3 -0.087488 6061.7 13455 0 7459 11231 0 6410.9 15143 0 7442 9803.6 0 9425.6 9044.4 0 6454.3 14540 0 7884 8838.7 0 8603.6 10809 0 6991.9 10984 0 26239 13348 0 5737.2 12738 0 7046.2 10602 0 6469.4 15076 0 7626.4 10229 0 9364.5 9537.5 0 6589.9 14341 0 8074.9 9065.7 0 9337.3 11389 0 6936.8 10747 0 24906 12819 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 32486000 8099900 24386000 0 NaN 2188 1243 116 116 339 364;365 393;394 434;435 394 435 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15705 394 435 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15705 393 434 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14850 Q6JBY9 120 Q6JBY9 Q6JBY9 CapZ-interacting protein RCSD1 sp|Q6JBY9|CPZIP_HUMAN CapZ-interacting protein OS=Homo sapiens GN=RCSD1 PE=1 SV=1 0.792902 10.5515 0.0510045 49.618 33.853 49.618 2 S SPKSPGLKAMVSPFHSPPSTPSSPGVRSRPS X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPXXXX AMVS(0.996)PFHS(0.793)PPS(0.072)T(0.048)PS(0.044)S(0.048)PGVR AMVS(31.35)PFHS(10.55)PPS(-10.55)T(-12.34)PS(-12.69)S(-12.34)PGVR 8 3 -0.087488 0 13455 0 0 11231 0 0 15143 0 0 9803.6 0 0 9044.4 0 0 14540 0 0 8838.7 0 0 10809 0 0 10984 0 0 13348 0 0 12738 0 0 10602 0 0 15076 0 0 10229 0 0 9537.5 0 0 14341 0 0 9065.7 0 0 11389 0 0 10747 0 0 12819 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 24386000 0 24386000 0 NaN 2189 1243 120 120 339 364;365 394 435 394 435 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15705 394 435 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15705 394 435 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15705 Q6JBY9 216 Q6JBY9 Q6JBY9 CapZ-interacting protein RCSD1 sp|Q6JBY9|CPZIP_HUMAN CapZ-interacting protein OS=Homo sapiens GN=RCSD1 PE=1 SV=1 0.997636 29.297 6.0136E-31 289.5 260.34 214.16 1 S EDGDEVLPSKSKAPGSPLSSEGAAGEGVRTL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPXX SKAPGS(0.998)PLS(0.001)S(0.001)EGAAGEGVR S(-47.49)KAPGS(29.3)PLS(-29.3)S(-29.3)EGAAGEGVR 6 3 0.08276 82780 0 0 31447 0 0 82576 0 0 30840 0 0 18876 0 0 80530 0 0 20491 0 0 46382 0 0 34364 0 0 13848 0 0 78330 0 0 29704 0 0 82384 0 0 32501 0 0 22953 0 0 78099 0 0 21160 0 0 48265 0 0 33318 0 0 14113 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 797820000 797820000 0 0 NaN 2190 1243 216 216 355;3875 381;4129 413;4406 456;4900 4406 4900 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10629 413 456 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11440 413 456 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11440 Q6JBY9 298 Q6JBY9 Q6JBY9 CapZ-interacting protein RCSD1 sp|Q6JBY9|CPZIP_HUMAN CapZ-interacting protein OS=Homo sapiens GN=RCSD1 PE=1 SV=1 1 162.709 9.14739E-08 162.71 135.32 162.71 1 S ESPQTSGPEAENRCGSPREEKPAGEEAEMEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP CGS(1)PREEKPAGEEAEMEK CGS(162.71)PREEKPAGEEAEMEK 3 4 -0.15751 39462 0 0 16627 0 0 43304 0 0 15686 0 0 11378 0 0 42274 0 0 11070 0 0 22037 0 0 16976 0 0 7391.2 0 0 37356 0 0 15701 0 0 42992 0 0 16590 0 0 13433 0 0 40947 0 0 11445 0 0 23112 0 0 16500 0 0 7469.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25123000 25123000 0 0 NaN 2191 1243 298 298 606 645 687 763 687 763 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10248 687 763 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10248 687 763 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10248 Q6JBY9 351 Q6JBY9 Q6JBY9 CapZ-interacting protein RCSD1 sp|Q6JBY9|CPZIP_HUMAN CapZ-interacting protein OS=Homo sapiens GN=RCSD1 PE=1 SV=1 0.999997 54.9495 2.95667E-07 162.94 130.45 162.94 1 S TKKLEEGAAVKETPHSPPGGVKGGDVPKQEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX ETPHS(1)PPGGVK ET(-54.95)PHS(54.95)PPGGVK 5 3 0.35521 151530 0 0 42817 0 0 161750 0 0 49242 0 0 25927 0 0 154490 0 0 27649 0 0 77034 0 0 52415 0 0 4216.7 0 0 143430 0 0 40485 0 0 160630 0 0 51859 0 0 34378 0 0 149200 0 0 28740 0 0 80400 0 0 50667 0 0 5753.3 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 263850000 263850000 0 0 NaN 2192 1243 351 351 1190 1251 1349;1350 1494;1495 1350 1495 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8596 1350 1495 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8596 1350 1495 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8596 Q6JBY9 242 Q6JBY9 Q6JBY9 CapZ-interacting protein RCSD1 sp|Q6JBY9|CPZIP_HUMAN CapZ-interacting protein OS=Homo sapiens GN=RCSD1 PE=1 SV=1 0.498284 0 0.0110601 70.808 29.821 70.808 S GVRTLGPAEKPPLRRSPSRTEKQEEDRATEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPXXXXXXXXX RS(0.498)PS(0.498)RT(0.003)EK RS(0)PS(0)RT(-21.62)EK 2 4 -0.12951 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2193 1243 242 242 3486;4195 3703;4471 3949 4387 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5137 3949 4387 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5137 3949 4387 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5137 Q6JBY9 244 Q6JBY9 Q6JBY9 CapZ-interacting protein RCSD1 sp|Q6JBY9|CPZIP_HUMAN CapZ-interacting protein OS=Homo sapiens GN=RCSD1 PE=1 SV=1 0.989453 20.4818 0.0110601 75.566 25.458 75.566 1 S RTLGPAEKPPLRRSPSRTEKQEEDRATEEAK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX S(0.002)PS(0.989)RT(0.009)EK S(-27.67)PS(20.48)RT(-20.48)EK 3 2 0.52749 20469 0 0 6336.2 0 0 17357 0 0 6587.2 0 0 6071.2 0 0 18827 0 0 7444 0 0 11540 0 0 5799 0 0 14181 0 0 19357 0 0 5987 0 0 17521 0 0 6944.9 0 0 6845.3 0 0 18260 0 0 7466.4 0 0 12285 0 0 5791.7 0 0 13620 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16833000 16833000 0 0 NaN 2194 1243 244 244 3486;4195 3703;4471 4765 5290 4765 5290 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5867 4765 5290 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5867 3949 4387 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5137 Q6JBY9 267 Q6JBY9 Q6JBY9 CapZ-interacting protein RCSD1 sp|Q6JBY9|CPZIP_HUMAN CapZ-interacting protein OS=Homo sapiens GN=RCSD1 PE=1 SV=1 0.5 0 8.98737E-18 219.76 201.62 219.76 1 S DRATEEAKNGEKARRSSEEVDGQHPAQEEVP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP RS(0.5)S(0.5)EEVDGQHPAQEEVPESPQTSGPEAENR RS(0)S(0)EEVDGQHPAQEEVPES(-109.09)PQT(-152.48)S(-161.77)GPEAENR 2 4 -0.35492 4471.5 0 0 2455.3 0 0 5807.4 0 0 2760.4 0 0 2681.1 0 0 6050.6 0 0 2761.7 0 0 3831.8 0 0 2901 0 0 2853.1 0 0 4236.2 0 0 2321.2 0 0 5732.8 0 0 2868.5 0 0 2906.6 0 0 5895.6 0 0 2811.1 0 0 4015.5 0 0 2856.5 0 0 2775.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17351000 17351000 0 0 NaN 2195 1243 267 267 3492 3709 3955 4393 3955 4393 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8653 3955 4393 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8653 3955 4393 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8653 Q6JBY9 268 Q6JBY9 Q6JBY9 CapZ-interacting protein RCSD1 sp|Q6JBY9|CPZIP_HUMAN CapZ-interacting protein OS=Homo sapiens GN=RCSD1 PE=1 SV=1 0.5 0 8.98737E-18 219.76 201.62 219.76 1 S RATEEAKNGEKARRSSEEVDGQHPAQEEVPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RS(0.5)S(0.5)EEVDGQHPAQEEVPESPQTSGPEAENR RS(0)S(0)EEVDGQHPAQEEVPES(-109.09)PQT(-152.48)S(-161.77)GPEAENR 3 4 -0.35492 4471.5 0 0 2455.3 0 0 5807.4 0 0 2760.4 0 0 2681.1 0 0 6050.6 0 0 2761.7 0 0 3831.8 0 0 2901 0 0 2853.1 0 0 4236.2 0 0 2321.2 0 0 5732.8 0 0 2868.5 0 0 2906.6 0 0 5895.6 0 0 2811.1 0 0 4015.5 0 0 2856.5 0 0 2775.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17351000 17351000 0 0 NaN 2196 1243 268 268 3492 3709 3955 4393 3955 4393 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8653 3955 4393 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8653 3955 4393 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8653 Q6JBY9 177 Q6JBY9 Q6JBY9 CapZ-interacting protein RCSD1 sp|Q6JBY9|CPZIP_HUMAN CapZ-interacting protein OS=Homo sapiens GN=RCSD1 PE=1 SV=1 0.767445 5.18522 3.55304E-07 156.29 130.17 156.29 1 S RGSIKRRPPSRRFRRSQSDCGELGDFRAVES X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(0.767)QS(0.233)DCGELGDFR S(5.19)QS(-5.19)DCGELGDFR 1 2 -0.35696 205780 0 0 79978 0 0 200640 0 0 80871 0 0 77572 0 0 206430 0 0 85137 0 0 126720 0 0 88535 0 0 101420 0 0 194700 0 0 75557 0 0 200830 0 0 84999 0 0 86097 0 0 200500 0 0 86392 0 0 133250 0 0 87213 0 0 98431 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 103890000 103890000 0 0 NaN 2197 1243 177 177 4235 4513 4809 5337;5338;5339 4809 5337 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13647 4809 5337 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13647 4809 5337 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13647 Q6JBY9 82 Q6JBY9 Q6JBY9 CapZ-interacting protein RCSD1 sp|Q6JBY9|CPZIP_HUMAN CapZ-interacting protein OS=Homo sapiens GN=RCSD1 PE=1 SV=1 0.618205 2.09302 0.00153664 114.89 57.791 114.89 1 S KSPPNASHPPKFKVKSSPLIEKLQANLTFDP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX S(0.618)S(0.382)PLIEK S(2.09)S(-2.09)PLIEK 1 2 0.44757 52515 0 0 36825 0 0 47891 0 0 34834 0 0 27404 0 0 51000 0 0 29268 0 0 40998 0 0 38621 0 0 7533.9 0 0 49675 0 0 34776 0 0 48242 0 0 36148 0 0 29054 0 0 50287 0 0 29959 0 0 41739 0 0 37711 0 0 8042.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 53836000 53836000 0 0 NaN 2198 1243 82 82 4382;5152 4669;5489 4973 5518 4973 5518 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13655 4973 5518 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13655 4973 5518 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13655 Q6JBY9 83 Q6JBY9 Q6JBY9 CapZ-interacting protein RCSD1 sp|Q6JBY9|CPZIP_HUMAN CapZ-interacting protein OS=Homo sapiens GN=RCSD1 PE=1 SV=1 0.855615 7.72758 3.66261E-06 150.11 110.4 150.11 1 S SPPNASHPPKFKVKSSPLIEKLQANLTFDPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX VKS(0.144)S(0.856)PLIEK VKS(-7.73)S(7.73)PLIEK 4 3 -0.37531 30989 0 0 22010 0 0 30255 0 0 19032 0 0 12180 0 0 27375 0 0 14297 0 0 20627 0 0 20985 0 0 3414.3 0 0 29320 0 0 20775 0 0 30290 0 0 19857 0 0 13464 0 0 26989 0 0 14634 0 0 21055 0 0 20423 0 0 3692.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 384930000 384930000 0 0 NaN 2199 1243 83 83 4382;5152 4669;5489 5848 6500 5848 6500 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14069 5848 6500 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14069 5848 6500 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14069 Q6KC79 349 Q6KC79 Q6KC79 Nipped-B-like protein NIPBL sp|Q6KC79|NIPBL_HUMAN Nipped-B-like protein OS=Homo sapiens GN=NIPBL PE=1 SV=2 0.594928 2.28558 7.01921E-08 171.68 145.55 171.68 1 S DEKEQSEKAAMYDIISSPSKDSTKLTLRLSR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPXXXXXXX AAMYDIIS(0.595)S(0.351)PS(0.054)KDSTK AAMY(-113.52)DIIS(2.29)S(-2.29)PS(-10.45)KDS(-52.3)T(-60.02)K 8 3 1.8542 22550 0 0 26154 0 0 24311 0 0 25082 0 0 17855 0 0 25697 0 0 22202 0 0 26842 0 0 26588 0 0 20281 0 0 21345 0 0 24700 0 0 24308 0 0 25829 0 0 18566 0 0 25783 0 0 22511 0 0 27492 0 0 26049 0 0 19718 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28529000 28529000 0 0 NaN 2200 1244 349 349 46;47 49;50 54 65 54 65 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17773 54 65 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17773 54 65 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17773 Q6KC79 350 Q6KC79 Q6KC79 Nipped-B-like protein NIPBL sp|Q6KC79|NIPBL_HUMAN Nipped-B-like protein OS=Homo sapiens GN=NIPBL PE=1 SV=2 0.97264 15.5246 7.42244E-05 120.53 101.2 120.53 1 S EKEQSEKAAMYDIISSPSKDSTKLTLRLSRV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPXXXXXXXXXXXX AAMYDIIS(0.027)S(0.973)PSK AAMY(-83.1)DIIS(-15.52)S(15.52)PS(-39.82)K 9 3 -0.17698 5649.1 0 0 6166.9 0 0 5597.6 0 0 6010.8 0 0 5005.4 0 0 6003.7 0 0 4835 0 0 5930.6 0 0 6778.5 0 0 5927.8 0 0 5345.3 0 0 5824.7 0 0 5631.8 0 0 6181.1 0 0 5113.9 0 0 6028.4 0 0 4983 0 0 6130.3 0 0 6605.9 0 0 5719 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12752000 12752000 0 0 NaN 2201 1244 350 350 46;47 49;50 53 64 53 64 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18977 53 64 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18977 53 64 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18977 Q6KC79 2658 Q6KC79 Q6KC79 Nipped-B-like protein NIPBL sp|Q6KC79|NIPBL_HUMAN Nipped-B-like protein OS=Homo sapiens GN=NIPBL PE=1 SV=2 0.999985 48.4674 1.19926E-10 179.79 121.11 179.79 1 S TNARNKAITSLLGGGSPKNNTAAETEDDESD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX AITSLLGGGS(1)PK AIT(-64.45)S(-48.47)LLGGGS(48.47)PK 10 2 0.067208 19906 0 0 15025 0 0 18996 0 0 16001 0 0 17918 0 0 19791 0 0 18643 0 0 18948 0 0 15913 0 0 26856 0 0 18833 0 0 14199 0 0 19168 0 0 16430 0 0 18255 0 0 19709 0 0 18868 0 0 19848 0 0 15817 0 0 25727 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 205460000 205460000 0 0 NaN 2202 1244 2658 2658 262 283 304 338 304 338 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20761 304 338 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20761 304 338 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20761 Q6KC79 305 Q6KC79 Q6KC79 Nipped-B-like protein NIPBL sp|Q6KC79|NIPBL_HUMAN Nipped-B-like protein OS=Homo sapiens GN=NIPBL PE=1 SV=2 0.746994 4.70321 9.2755E-08 159.16 124.25 159.16 1 S GSRPPLILQSQSLPCSSPRDVPPDILLDSPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX GSRPPLILQSQSLPCS(0.747)S(0.253)PR GS(-127.68)RPPLILQS(-68.68)QS(-39.81)LPCS(4.7)S(-4.7)PR 16 3 -1.4594 11635 0 0 11123 0 0 11809 0 0 11482 0 0 9220.9 0 0 11886 0 0 9689.4 0 0 10662 0 0 11309 0 0 11749 0 0 11010 0 0 10510 0 0 11850 0 0 11774 0 0 9518.3 0 0 11903 0 0 9884.8 0 0 11096 0 0 11090 0 0 11310 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 153350000 153350000 0 0 NaN 2203 1244 305 305 1634 1721 1860 2073 1860 2073 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15715 1860 2073 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15715 1860 2073 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15715 Q6KC79 280 Q6KC79 Q6KC79 Nipped-B-like protein NIPBL sp|Q6KC79|NIPBL_HUMAN Nipped-B-like protein OS=Homo sapiens GN=NIPBL PE=1 SV=2 0.99114 21.285 0.00116447 98.507 66.868 98.507 1 S RNAASFPLRSPQPVCSPAGSEGTPKGSRPPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPXXXXXX S(0.001)PQPVCS(0.991)PAGS(0.007)EGTPK S(-28.31)PQPVCS(21.28)PAGS(-21.28)EGT(-46.06)PK 7 3 -1.1342 18672 0 0 17172 0 0 17995 0 0 14968 0 0 14584 0 0 18929 0 0 14505 0 0 16556 0 0 16723 0 0 6511.1 0 0 17666 0 0 16209 0 0 18117 0 0 15567 0 0 15002 0 0 18779 0 0 14829 0 0 16895 0 0 16407 0 0 6514.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37498000 37498000 0 0 NaN 2204 1244 280 280 4157 4431 4722 5241 4722 5241 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9929 4722 5241 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9929 4722 5241 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9929 Q6KC79 892 Q6KC79 Q6KC79 Nipped-B-like protein NIPBL sp|Q6KC79|NIPBL_HUMAN Nipped-B-like protein OS=Homo sapiens GN=NIPBL PE=1 SV=2 0.920391 10.6301 0.0525712 47.187 29.278 47.187 1 S SRERPSSGEQKSRPDSPRVKQGDSNKSRSDK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX S(0.08)RPDS(0.92)PR S(-10.63)RPDS(10.63)PR 5 2 0.91098 1022.5 0 0 342.01 0 0 333.96 0 0 303.86 0 0 380.97 0 0 287.94 0 0 253.92 0 0 429.97 0 0 0 0 0 2934.6 0 0 964.99 0 0 322.86 0 0 376.21 0 0 314.07 0 0 381.8 0 0 296.64 0 0 257.61 0 0 514.21 0 0 0 0 0 2773.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 941670 941670 0 0 NaN 2205 1244 892 892 4269 4548 4847 5379 4847 5379 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4576 4847 5379 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4576 4847 5379 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4576 Q6L8Q7 219 Q6L8Q7 Q6L8Q7 2',5'-phosphodiesterase 12 PDE12 sp|Q6L8Q7|PDE12_HUMAN 2',5'-phosphodiesterase 12 OS=Homo sapiens GN=PDE12 PE=1 SV=2 0.578588 1.38455 4.67161E-12 178.8 167.28 178.8 1 S GAAEPEVGVPSSLSPSSPSSSWTETDVEERV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPX EAKPGAAEPEVGVPSSLSPS(0.579)S(0.421)PSSSWTETDVEER EAKPGAAEPEVGVPS(-71.83)S(-64.62)LS(-36.63)PS(1.38)S(-1.38)PS(-32.43)S(-33.45)S(-40.61)WT(-60.11)ET(-73.29)DVEER 20 4 0.62812 2468 0 0 2966.1 0 0 2425.2 0 0 3181.9 0 0 2688.8 0 0 2359.7 0 0 2722.7 0 0 3031.1 0 0 2733.5 0 0 9928.5 0 0 2335.2 0 0 2803.2 0 0 2447.8 0 0 3240.7 0 0 2713.5 0 0 2429.1 0 0 2770.1 0 0 3313.6 0 0 2696.6 0 0 9419 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12996000 12996000 0 0 NaN 2206 1245 219 219 874 927 1004 1110 1004 1110 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17739 1004 1110 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17739 1004 1110 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17739 Q6MZP7 310 Q6MZP7 Q6MZP7 Protein lin-54 homolog LIN54 sp|Q6MZP7|LIN54_HUMAN Protein lin-54 homolog OS=Homo sapiens GN=LIN54 PE=1 SV=3 0.993098 21.5802 0.00692976 79.652 58.094 79.652 1 S STLNSTTQTPNKIAISPLKSPNKAVKSTVQT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX IAIS(0.993)PLKS(0.007)PNK IAIS(21.58)PLKS(-21.58)PNK 4 3 -0.15426 13365 0 0 21060 0 0 12963 0 0 20373 0 0 16083 0 0 14865 0 0 16860 0 0 17552 0 0 22215 0 0 5169 0 0 12646 0 0 19891 0 0 13115 0 0 20871 0 0 16153 0 0 15189 0 0 17271 0 0 17658 0 0 21693 0 0 5273.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17188000 17188000 0 0 NaN 2207 1246 310 310 1773 1872 2019 2250 2019 2250 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16986 2019 2250 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16986 2019 2250 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16986 Q6N021 99 Q6N021 Q6N021 Methylcytosine dioxygenase TET2 TET2 sp|Q6N021|TET2_HUMAN Methylcytosine dioxygenase TET2 OS=Homo sapiens GN=TET2 PE=1 SV=3 0.887468 8.99084 1.0409E-15 213.51 172.93 213.51 1 S GYSKCLQNGGIKRTVSEPSLSGLLQIKKLKQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX T(0.112)VS(0.887)EPS(0.001)LSGLLQIK T(-8.99)VS(8.99)EPS(-31.92)LS(-99.2)GLLQIK 3 3 -0.96633 12389 0 0 12973 0 0 15440 0 0 14296 0 0 17780 0 0 16155 0 0 20871 0 0 19633 0 0 16322 0 0 19751 0 0 11735 0 0 12263 0 0 15406 0 0 14628 0 0 17944 0 0 16191 0 0 20972 0 0 20154 0 0 16298 0 0 19053 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 36679000 36679000 0 0 NaN 2208 1247 99 99 5014 5345 5695 6325 5695 6325 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23616 5695 6325 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23616 5695 6325 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23616 Q6N021 75 Q6N021 Q6N021 Methylcytosine dioxygenase TET2 TET2 sp|Q6N021|TET2_HUMAN Methylcytosine dioxygenase TET2 OS=Homo sapiens GN=TET2 PE=1 SV=3 0.999984 47.9416 2.84959E-06 149.58 117.17 149.58 1 S YYGIPCMKGSQNSRVSPDFTQESRGYSKCLQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPXXXXXXX VS(1)PDFTQESR VS(47.94)PDFT(-47.94)QES(-93.83)R 2 2 0.045031 13957 0 0 13953 0 0 14310 0 0 14814 0 0 17399 0 0 15001 0 0 16446 0 0 16809 0 0 16035 0 0 8577.5 0 0 13209 0 0 13186 0 0 14425 0 0 15161 0 0 17460 0 0 15067 0 0 16775 0 0 17049 0 0 15839 0 0 8465.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13045000 13045000 0 0 NaN 2209 1247 75 75 5260 5606 5976 6640 5976 6640 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12483 5976 6640 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12483 5976 6640 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12483 Q6N043 545 Q6N043 Q6N043 Zinc finger protein 280D ZNF280D sp|Q6N043|Z280D_HUMAN Zinc finger protein 280D OS=Homo sapiens GN=ZNF280D PE=1 SV=3 1 71.7948 3.72306E-18 239.22 225.61 239.22 1 S SPTPSISASASTLQLSPPRTKNITAKNPAKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX ASVGPLQSGASPTPSISASASTLQLS(1)PPR AS(-220.21)VGPLQS(-198.14)GAS(-183.22)PT(-150.7)PS(-115.02)IS(-89.34)AS(-79.67)AS(-75.73)T(-71.79)LQLS(71.79)PPR 26 3 -1.1005 3091.8 0 0 4204.5 0 0 4053.1 0 0 3707.5 0 0 3518.9 0 0 3923.8 0 0 3689.8 0 0 5763.7 0 0 4459.7 0 0 75926 0 0 2929.3 0 0 3969 0 0 4019.7 0 0 3840.5 0 0 3605.7 0 0 4089.4 0 0 3768.7 0 0 7997.9 0 0 4367.8 0 0 71627 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19352000 19352000 0 0 NaN 2210 1248 545 545 515 547 587 654 587 654 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19868 587 654 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19868 587 654 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19868 Q6NXT4 382 Q6NXT4 Q6NXT4 Zinc transporter 6 SLC30A6 sp|Q6NXT4|ZNT6_HUMAN Zinc transporter 6 OS=Homo sapiens GN=SLC30A6 PE=1 SV=2 0.8362 7.08089 2.30747E-09 175.69 156.72 175.69 1 S TDDLNPVTSTPAKPSSPPPEFSFNTPGKNVN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPXXX GTDDLNPVTSTPAKPS(0.164)S(0.836)PPPEFSFNTPGK GT(-114.13)DDLNPVT(-56.86)S(-47.92)T(-47.92)PAKPS(-7.08)S(7.08)PPPEFS(-51.2)FNT(-67.58)PGK 17 4 0.26175 4526.8 0 0 5285 0 0 5610.8 0 0 5409.9 0 0 3079.1 0 0 4973.9 0 0 3214.7 0 0 4575.6 0 0 5653 0 0 14982 0 0 4287.6 0 0 4993.2 0 0 5556.7 0 0 5540.1 0 0 3278.3 0 0 5028.2 0 0 3332.5 0 0 5056.6 0 0 5474.4 0 0 14213 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9859500 9859500 0 0 NaN 2211 1249 382 382 1650 1741 1882 2100 1882 2100 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19414 1882 2100 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19414 1882 2100 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19414 Q6NYC8 145 Q6NYC8 Q6NYC8 Phostensin PPP1R18 sp|Q6NYC8|PPR18_HUMAN Phostensin OS=Homo sapiens GN=PPP1R18 PE=1 SV=1 1 74.6004 0.0106308 74.6 16.641 74.6 1 S RDQSPKGRESREERLSPRETRERRLGIGGAQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX EERLS(1)PR EERLS(74.6)PR 5 3 -0.036054 14623 0 0 18501 0 0 14875 0 0 19206 0 0 15276 0 0 13728 0 0 15143 0 0 17589 0 0 18869 0 0 2335 0 0 13838 0 0 17481 0 0 14969 0 0 19589 0 0 15480 0 0 14058 0 0 15523 0 0 17564 0 0 18460 0 0 2605.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20136000 20136000 0 0 NaN 2212 1250 145 145 934 988 1072 1184 1072 1184 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6529 1072 1184 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6529 1072 1184 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6529 Q6NYC8 125 Q6NYC8 Q6NYC8 Phostensin PPP1R18 sp|Q6NYC8|PPR18_HUMAN Phostensin OS=Homo sapiens GN=PPP1R18 PE=1 SV=1 1 62.9238 0.0114068 62.924 27.72 62.924 1 S AERKPGPLEARERRPSPGEMRDQSPKGRESR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX ERRPS(1)PGEMR ERRPS(62.92)PGEMR 5 3 -0.12367 578.63 0 0 1102.9 0 0 1325.9 0 0 1176.6 0 0 1678.9 0 0 959.78 0 0 1291.2 0 0 1207.4 0 0 1166.7 0 0 2298.9 0 0 550.33 0 0 1042.3 0 0 1295.7 0 0 1200.1 0 0 1677.3 0 0 979.15 0 0 1329.5 0 0 1270.8 0 0 1156.5 0 0 2192.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 3118300 3118300 0 0 NaN 2213 1250 125 125 1129 1188 1278 1405 1278 1405 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4741 1278 1405 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4741 1278 1405 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4741 Q6NYC8 224 Q6NYC8 Q6NYC8 Phostensin PPP1R18 sp|Q6NYC8|PPR18_HUMAN Phostensin OS=Homo sapiens GN=PPP1R18 PE=1 SV=1 1 67.4901 4.83218E-10 205.09 146.02 205.09 1 S SREQSPRRKEVESRLSPGESAYQKLGLTEAH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPXXXXXXX LS(1)PGESAYQK LS(67.49)PGES(-67.49)AY(-149.18)QK 2 2 0.55159 17701 0 0 25826 0 0 16558 0 0 22505 0 0 18181 0 0 18763 0 0 18238 0 0 20426 0 0 24885 0 0 11450 0 0 16746 0 0 24378 0 0 16758 0 0 23250 0 0 18361 0 0 19016 0 0 18744 0 0 20770 0 0 24273 0 0 11254 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21603000 21603000 0 0 NaN 2214 1250 224 224 2571 2715 2913 3247 2913 3247 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13240 2913 3247 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13240 2913 3247 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13240 Q6NYC8 530 Q6NYC8 Q6NYC8 Phostensin PPP1R18 sp|Q6NYC8|PPR18_HUMAN Phostensin OS=Homo sapiens GN=PPP1R18 PE=1 SV=1 1 67.4084 0.000291278 112.02 83.445 112.02 1 S LGGYLRLSRSCLAKGSPERHHKQLKISFSET X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX SCLAKGS(1)PER S(-67.41)CLAKGS(67.41)PER 7 2 0.49949 13879 0 0 14194 0 0 13224 0 0 14179 0 0 31234 0 0 12992 0 0 30717 0 0 19555 0 0 13995 0 0 3303.8 0 0 13131 0 0 13409 0 0 13573 0 0 14541 0 0 30610 0 0 13164 0 0 30834 0 0 19460 0 0 14518 0 0 3563.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16202000 16202000 0 0 NaN 2215 1250 530 530 3642 3872 4126 4585 4126 4585 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8199 4126 4585 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8199 4126 4585 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8199 Q6NZY4 658 Q6NZY4 Q6NZY4 Zinc finger CCHC domain-containing protein 8 ZCCHC8 sp|Q6NZY4|ZCHC8_HUMAN Zinc finger CCHC domain-containing protein 8 OS=Homo sapiens GN=ZCCHC8 PE=1 SV=2 0.999998 57.9617 0.00830413 74.987 55.929 74.987 1 S LFPADTSPSTATKIHSPIPDMSKFATGITPF X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX IHS(1)PIPDMSK IHS(57.96)PIPDMS(-57.96)K 3 3 -0.85222 15219 0 0 17441 0 0 16802 0 0 19591 0 0 9783.9 0 0 16550 0 0 8737 0 0 15387 0 0 18571 0 0 2131.6 0 0 14407 0 0 16488 0 0 16740 0 0 19935 0 0 10338 0 0 16715 0 0 9213.1 0 0 15544 0 0 17907 0 0 2363.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 52055000 52055000 0 0 NaN 2216 1251 658 658 1855 1959 2116 2373 2116 2373 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14569 2116 2373 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14569 2116 2373 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14569 Q6P0N0 365 Q6P0N0 Q6P0N0 Mis18-binding protein 1 MIS18BP1 sp|Q6P0N0|M18BP_HUMAN Mis18-binding protein 1 OS=Homo sapiens GN=MIS18BP1 PE=1 SV=1 0.960251 13.8306 0.0255017 52.79 27.596 52.79 1 S HITIPRRSKRNISKLSPPRIFQTVTNGLKKN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX NIS(0.04)KLS(0.96)PPR NIS(-13.83)KLS(13.83)PPR 6 3 0.40897 14181 0 0 7114.7 0 0 14526 0 0 7857.3 0 0 5761 0 0 14498 0 0 6582.2 0 0 9177.8 0 0 7702.6 0 0 1603.5 0 0 13420 0 0 6725.3 0 0 14501 0 0 8129 0 0 6376.4 0 0 14172 0 0 6691.4 0 0 9460.5 0 0 7552.7 0 0 1722.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19150000 19150000 0 0 NaN 2217 1252 365 365 2832 3002 3215 3568 3215 3568 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12613 3215 3568 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12613 3215 3568 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12613 Q6P0N0 1042 Q6P0N0 Q6P0N0 Mis18-binding protein 1 MIS18BP1 sp|Q6P0N0|M18BP_HUMAN Mis18-binding protein 1 OS=Homo sapiens GN=MIS18BP1 PE=1 SV=1 0.998865 29.456 0.00319843 92.854 67.264 92.854 1 S SVIFPLVKTPQCQHVSPGMLGSINRNDCDKY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPXXXXXX T(0.001)PQCQHVS(0.999)PGMLGSINR T(-29.46)PQCQHVS(29.46)PGMLGS(-55.19)INR 8 3 0.041267 9497.1 0 0 9341.2 0 0 11378 0 0 9164.9 0 0 8062 0 0 10317 0 0 8749.5 0 0 10174 0 0 9069.6 0 0 11922 0 0 8993.8 0 0 8823.3 0 0 11309 0 0 9439.5 0 0 8387.2 0 0 10311 0 0 8882 0 0 10570 0 0 8935.4 0 0 11462 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12506000 12506000 0 0 NaN 2218 1252 1042 1042 4835 5160 5499 6117 5499 6117 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14442 5499 6117 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14442 5499 6117 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14442 Q6P0N0 671 Q6P0N0 Q6P0N0 Mis18-binding protein 1 MIS18BP1 sp|Q6P0N0|M18BP_HUMAN Mis18-binding protein 1 OS=Homo sapiens GN=MIS18BP1 PE=1 SV=1 0.99504 23.0241 0.000514562 110.8 68.591 110.8 1 S KSRKVIEQRCMRYNLSAGTIKAVTDFVIPEC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX YNLS(0.995)AGT(0.005)IK Y(-68.61)NLS(23.02)AGT(-23.02)IK 4 2 0.23235 21940 0 0 14271 0 0 24357 0 0 13652 0 0 14631 0 0 27003 0 0 16483 0 0 19029 0 0 14310 0 0 12105 0 0 20770 0 0 13478 0 0 24271 0 0 14270 0 0 15445 0 0 26393 0 0 16630 0 0 19761 0 0 14212 0 0 11838 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6214400 6214400 0 0 NaN 2219 1252 671 671 5406 5758 6145 6832 6145 6832 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16205 6145 6832 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16205 6145 6832 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16205 Q6P0Q8 74 Q6P0Q8 Q6P0Q8 Microtubule-associated serine/threonine-protein kinase 2 MAST2 sp|Q6P0Q8|MAST2_HUMAN Microtubule-associated serine/threonine-protein kinase 2 OS=Homo sapiens GN=MAST2 PE=1 SV=2 0.999909 40.5072 5.76454E-07 147.53 129.39 147.53 1 S QDVVTGVSPLLFRKLSNPDIFSSTGKVKLQR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX KLS(1)NPDIFSSTGK KLS(40.51)NPDIFS(-40.51)S(-57.15)T(-76.73)GK 3 3 0.63671 14362 0 0 21333 0 0 17096 0 0 19478 0 0 16529 0 0 16848 0 0 17581 0 0 18307 0 0 21106 0 0 14593 0 0 13600 0 0 20142 0 0 17052 0 0 20070 0 0 16825 0 0 17051 0 0 17942 0 0 18746 0 0 20676 0 0 14165 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28385000 28385000 0 0 NaN 2220 1253 74 74 2129 2250 2423 2700 2423 2700 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17256 2423 2700 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17256 2423 2700 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17256 Q6P0Q8 1381 Q6P0Q8 Q6P0Q8 Microtubule-associated serine/threonine-protein kinase 2 MAST2 sp|Q6P0Q8|MAST2_HUMAN Microtubule-associated serine/threonine-protein kinase 2 OS=Homo sapiens GN=MAST2 PE=1 SV=2 1 90.6531 0.00359569 90.653 71.382 90.653 1 S LSGHVAQAFPTKLHLSPPLGRQLSRPKSAEP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX LHLS(1)PPLGR LHLS(90.65)PPLGR 4 3 -0.33855 4790.9 0 0 5480.8 0 0 4874.8 0 0 5554.7 0 0 4236.3 0 0 4878.1 0 0 4020.2 0 0 4915.9 0 0 5584.8 0 0 925.78 0 0 4533.7 0 0 5177.9 0 0 4895.6 0 0 5688 0 0 4335.1 0 0 4922 0 0 4145.4 0 0 4957.4 0 0 5444.2 0 0 985.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 4490100 4490100 0 0 NaN 2221 1253 1381 1381 2398 2535 2728 3048 2728 3048 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16746 2728 3048 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16746 2728 3048 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16746 Q6P1J6 1192 Q6P1J6 Q6P1J6 Phospholipase B1, membrane-associated;Phospholipase A2;Lysophospholipase PLB1 sp|Q6P1J6|PLB1_HUMAN Phospholipase B1, membrane-associated OS=Homo sapiens GN=PLB1 PE=1 SV=3 1 60.5633 0.0159123 60.563 17.317 60.563 1 S DMPAQAWDLVERMKNSPDINLEKDWKLVTLF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPXXXXXXXX NS(1)PDINLEK NS(60.56)PDINLEK 2 3 0.29252 17176 0 0 8132.9 0 0 16404 0 0 10604 0 0 6297 0 0 15903 0 0 6526.8 0 0 10989 0 0 9252 0 0 1995.4 0 0 16250 0 0 7696.9 0 0 16439 0 0 10822 0 0 6992.7 0 0 15646 0 0 6707.3 0 0 11274 0 0 9013.4 0 0 2133.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12463000 12463000 0 0 NaN 2222 1254 1192 1192 2921 3097 3317 3677 3317 3677 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11408 3317 3677 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11408 3317 3677 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11408 Q6P1L5 273 Q6P1L5 Q6P1L5 Protein FAM117B FAM117B sp|Q6P1L5|F117B_HUMAN Protein FAM117B OS=Homo sapiens GN=FAM117B PE=1 SV=2 0.995026 24.8041 5.46557E-10 182.03 136.03 182.03 1 S EEYSEKKKGSHKRSASWGSTDQLKEIAKLRQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX S(0.001)AS(0.995)WGS(0.003)T(0.001)DQLK S(-29.71)AS(24.8)WGS(-24.8)T(-32.07)DQLK 3 2 0.12636 20139 0 0 20285 0 0 19366 0 0 19114 0 0 25664 0 0 18837 0 0 26374 0 0 21733 0 0 18672 0 0 13843 0 0 19054 0 0 19156 0 0 19624 0 0 19693 0 0 25675 0 0 18956 0 0 26602 0 0 22105 0 0 18750 0 0 13538 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28400000 28400000 0 0 NaN 2223 1255 273 273 3628 3857 4110 4567 4110 4567 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15468 4110 4567 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15468 4110 4567 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15468 Q6P1L5 219 Q6P1L5 Q6P1L5 Protein FAM117B FAM117B sp|Q6P1L5|F117B_HUMAN Protein FAM117B OS=Homo sapiens GN=FAM117B PE=1 SV=2 0.303267 0 0.0205663 65.887 47.292 65.887 S TRQPSSSPSSIIRRTSSLDTLAAPYLAGHWP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T(0.303)S(0.303)S(0.303)LDT(0.09)LAAPYLAGHWPR T(0)S(0)S(0)LDT(-5.27)LAAPY(-60.91)LAGHWPR 2 3 -0.61053 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2224 1255 219 219 4962 5290 5633 6260 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22708 5633 6260 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22708 5633 6260 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22708 Q6P1L5 220 Q6P1L5 Q6P1L5 Protein FAM117B FAM117B sp|Q6P1L5|F117B_HUMAN Protein FAM117B OS=Homo sapiens GN=FAM117B PE=1 SV=2 0.303267 0 0.0205663 65.887 47.292 65.887 S RQPSSSPSSIIRRTSSLDTLAAPYLAGHWPR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T(0.303)S(0.303)S(0.303)LDT(0.09)LAAPYLAGHWPR T(0)S(0)S(0)LDT(-5.27)LAAPY(-60.91)LAGHWPR 3 3 -0.61053 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2225 1255 220 220 4962 5290 5633 6260 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22708 5633 6260 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22708 5633 6260 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22708 Q6P1L5 457 Q6P1L5 Q6P1L5 Protein FAM117B FAM117B sp|Q6P1L5|F117B_HUMAN Protein FAM117B OS=Homo sapiens GN=FAM117B PE=1 SV=2 0.982579 17.5211 0.000126572 113.29 76.65 113.29 1 S DKENGNNSPLPKYATSPKPNNSYMFKREPPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX YAT(0.017)S(0.983)PKPNNSYMFK Y(-53.09)AT(-17.52)S(17.52)PKPNNS(-45.64)Y(-62.39)MFK 4 3 1.2126 12667 0 0 11836 0 0 13992 0 0 12538 0 0 20024 0 0 14307 0 0 24433 0 0 17983 0 0 13556 0 0 13221 0 0 11991 0 0 11185 0 0 14095 0 0 12860 0 0 20016 0 0 14332 0 0 24361 0 0 18294 0 0 13837 0 0 12866 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11206000 11206000 0 0 NaN 2226 1255 457 457 5359 5709 6087 6765 6087 6765 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16313 6087 6765 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16313 6087 6765 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16313 Q6P1R3 13 Q6P1R3 Q6P1R3 Myb/SANT-like DNA-binding domain-containing protein 2 MSANTD2 sp|Q6P1R3|MSD2_HUMAN Myb/SANT-like DNA-binding domain-containing protein 2 OS=Homo sapiens GN=MSANTD2 PE=1 SV=1 1 75.4338 3.33505E-08 171.39 157.73 171.39 1 S ___MAAPCGSELPANSPLKIPKMEVLSPASP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPXXXXXXXXX AAPCGSELPANS(1)PLKIPK AAPCGS(-75.43)ELPANS(75.43)PLKIPK 12 3 1.7375 9708.7 0 0 8608.2 0 0 11158 0 0 8749.2 0 0 8397.4 0 0 10251 0 0 7701 0 0 8306.3 0 0 9422 0 0 12669 0 0 9192.3 0 0 8132.6 0 0 11117 0 0 8998.9 0 0 8676.4 0 0 10208 0 0 7919.5 0 0 8789 0 0 9223.7 0 0 12122 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10483000 10483000 0 0 NaN 2227 1256 13 13 48 51 55 66 55 66 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18331 55 66 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18331 55 66 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18331 Q6P1R3 48 Q6P1R3 Q6P1R3 Myb/SANT-like DNA-binding domain-containing protein 2 MSANTD2 sp|Q6P1R3|MSD2_HUMAN Myb/SANT-like DNA-binding domain-containing protein 2 OS=Homo sapiens GN=MSANTD2 PE=1 SV=1 1 65.8266 7.56559E-12 190.82 167.02 190.82 1 S DGNPSLSDPSTPRGASPLGPGSAAGSGAAAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP GAS(1)PLGPGSAAGSGAAASGGLGLGLGGR GAS(65.83)PLGPGS(-65.83)AAGS(-123.81)GAAAS(-174.37)GGLGLGLGGR 3 3 2.0233 7276.3 0 0 5744.2 0 0 7332.1 0 0 6309.7 0 0 7185.9 0 0 7834.9 0 0 4957.8 0 0 6143.5 0 0 5679.2 0 0 14508 0 0 6885.5 0 0 5429.6 0 0 7373.9 0 0 6468.6 0 0 7270.1 0 0 7791.3 0 0 5173.4 0 0 6665 0 0 5573.1 0 0 13803 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23681000 23681000 0 0 NaN 2228 1256 48 48 1372 1447 1555 1719 1555 1719 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18516 1555 1719 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18516 1555 1719 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18516 Q6P1X5 1185 Q6P1X5 Q6P1X5 Transcription initiation factor TFIID subunit 2 TAF2 sp|Q6P1X5|TAF2_HUMAN Transcription initiation factor TFIID subunit 2 OS=Homo sapiens GN=TAF2 PE=1 SV=3 0.634358 3.31387 0.0225918 57.86 25.126 57.86 1 S KHDSKEKDKEPFTFSSPASGRSIRSPSLSD_ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPXXXXXXXXXX DKEPFT(0.069)FS(0.296)S(0.634)PAS(0.001)GR DKEPFT(-9.66)FS(-3.31)S(3.31)PAS(-26.72)GR 9 3 0.42878 9091.5 0 0 8918.4 0 0 8923.2 0 0 8327.9 0 0 10753 0 0 9514.5 0 0 11337 0 0 10264 0 0 10579 0 0 4917.3 0 0 8602.3 0 0 8421.6 0 0 9018.4 0 0 8605.9 0 0 10811 0 0 9502.5 0 0 11491 0 0 10415 0 0 10470 0 0 4867.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17928000 17928000 0 0 NaN 2229 1257 1185 1185 716 760 811 897 811 897 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15388 811 897 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15388 811 897 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15388 Q6P2E9 6 Q6P2E9 Q6P2E9 Enhancer of mRNA-decapping protein 4 EDC4 sp|Q6P2E9|EDC4_HUMAN Enhancer of mRNA-decapping protein 4 OS=Homo sapiens GN=EDC4 PE=1 SV=1 0.950115 12.7981 2.29139E-16 149.3 120.53 149.3 1 S __________MASCASIDIEDATQHLRDILK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPXXXX AS(0.05)CAS(0.95)IDIEDATQHLR AS(-12.8)CAS(12.8)IDIEDAT(-83.82)QHLR 5 2 -0.58197 4046.9 0 0 4183.6 0 0 4931.2 0 0 3436.6 0 0 4840.4 0 0 3410.1 0 0 5143.1 0 0 5133.3 0 0 4615.6 0 0 27535 0 0 3832.8 0 0 3947.8 0 0 4914 0 0 3573.8 0 0 4921.2 0 0 3492.7 0 0 5206.3 0 0 5912 0 0 4576.6 0 0 26047 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13776000 13776000 0 0 NaN 2230 1258 6 6 439 468 503 564 503 564 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18505 503 564 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18505 503 564 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18505 Q6P2E9 879 Q6P2E9 Q6P2E9 Enhancer of mRNA-decapping protein 4 EDC4 sp|Q6P2E9|EDC4_HUMAN Enhancer of mRNA-decapping protein 4 OS=Homo sapiens GN=EDC4 PE=1 SV=1 0.982935 17.6826 2.18418E-12 205.53 159.59 205.53 1 S HLLQQRDSQDASAEQSDHDDEVASLASASGG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPPPPPP DSQDAS(0.017)AEQS(0.983)DHDDEVASLASASGGFGTK DS(-35.08)QDAS(-17.68)AEQS(17.68)DHDDEVAS(-101.4)LAS(-162.5)AS(-170.38)GGFGT(-198.13)K 10 4 1.817 5245 0 0 7835 0 0 6388.9 0 0 9751.3 0 0 5687 0 0 6746.8 0 0 7216.8 0 0 7426.2 0 0 7005.8 0 0 20875 0 0 4967.4 0 0 7412.4 0 0 6361.8 0 0 9847.1 0 0 5834.1 0 0 6944.6 0 0 7266.8 0 0 8051.7 0 0 6921.5 0 0 19828 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14606000 14606000 0 0 NaN 2231 1258 879 879 818 866 922 1017 922 1017 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16933 922 1017 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16933 922 1017 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16933 Q6P2E9 844 Q6P2E9 Q6P2E9 Enhancer of mRNA-decapping protein 4 EDC4 sp|Q6P2E9|EDC4_HUMAN Enhancer of mRNA-decapping protein 4 OS=Homo sapiens GN=EDC4 PE=1 SV=1 1 93.9624 4.56809E-07 163.93 121.3 163.93 1 S TAPDITRETCSTLAESPRNGLQEKHKSLAFH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX ETCSTLAES(1)PR ET(-119.32)CS(-102)T(-93.96)LAES(93.96)PR 9 2 -2.8162 20152 0 0 25463 0 0 19890 0 0 24703 0 0 13567 0 0 21159 0 0 14500 0 0 20678 0 0 26598 0 0 10065 0 0 19068 0 0 24050 0 0 19968 0 0 25353 0 0 14166 0 0 21380 0 0 15046 0 0 21063 0 0 25731 0 0 9955.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37488000 37488000 0 0 NaN 2232 1258 844 844 1177 1238 1336 1480 1336 1480 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8256 1336 1480 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8256 1336 1480 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8256 Q6P2E9 723 Q6P2E9 Q6P2E9 Enhancer of mRNA-decapping protein 4 EDC4 sp|Q6P2E9|EDC4_HUMAN Enhancer of mRNA-decapping protein 4 OS=Homo sapiens GN=EDC4 PE=1 SV=1 0.817462 6.51116 3.01209E-08 167.48 155.05 167.48 1 S SLELQEVEPLGLPQASPSRTRSPDVISSAST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX GPGQVPTATSALSLELQEVEPLGLPQAS(0.817)PS(0.183)R GPGQVPT(-97.01)AT(-84.72)S(-78.29)ALS(-71.7)LELQEVEPLGLPQAS(6.51)PS(-6.51)R 28 4 0.87525 9413.6 0 0 15392 0 0 9272.1 0 0 14485 0 0 4016.4 0 0 13619 0 0 6637.3 0 0 14375 0 0 20785 0 0 52484 0 0 8907.1 0 0 14535 0 0 9285.2 0 0 14914 0 0 4436.6 0 0 13798 0 0 7017.8 0 0 15972 0 0 19908 0 0 49752 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 356220000 356220000 0 0 NaN 2233 1258 723 723 1544 1626 1755 1948 1755 1948 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23613 1755 1948 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23613 1755 1948 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23613 Q6P2E9 729 Q6P2E9 Q6P2E9 Enhancer of mRNA-decapping protein 4 EDC4 sp|Q6P2E9|EDC4_HUMAN Enhancer of mRNA-decapping protein 4 OS=Homo sapiens GN=EDC4 PE=1 SV=1 0.86873 8.28617 5.08614E-12 192.58 171.27 192.58 1 S VEPLGLPQASPSRTRSPDVISSASTALSQDI X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.869)PDVIS(0.129)S(0.002)ASTALSQDIPEIASEALSR S(8.29)PDVIS(-8.29)S(-25.67)AS(-50.26)T(-57.9)ALS(-100.43)QDIPEIAS(-180.09)EALS(-189.51)R 1 3 -0.12758 3441.2 0 0 4910.5 0 0 4013.6 0 0 4955.4 0 0 4687.9 0 0 4805.3 0 0 4625.6 0 0 6157.2 0 0 5767.1 0 0 40905 0 0 3258.4 0 0 4639 0 0 4016.7 0 0 5082.9 0 0 4717.7 0 0 4917.3 0 0 4742.7 0 0 7356.3 0 0 5642 0 0 38660 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 59454000 59454000 0 0 NaN 2234 1258 729 729 4084;4903 4354;5228 4644 5157 4644 5157 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24069 4644 5157 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24069 4644 5157 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24069 Q6P2E9 914 Q6P2E9 Q6P2E9 Enhancer of mRNA-decapping protein 4 EDC4 sp|Q6P2E9|EDC4_HUMAN Enhancer of mRNA-decapping protein 4 OS=Homo sapiens GN=EDC4 PE=1 SV=1 0.54963 1.32428 0.0351485 50.806 17.86 50.806 2 S VPAPRLPAKDWKTKGSPRTSPKLKRKSKKDD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX T(0.436)KGS(0.55)PRT(0.171)S(0.844)PK T(-1.32)KGS(1.32)PRT(-7.62)S(7.62)PK 4 3 -0.24958 0 25680 0 0 22050 0 0 27157 0 0 21036 0 0 20421 0 0 25130 0 0 26003 0 0 23373 0 0 23994 0 0 3792.4 0 0 24305 0 0 20824 0 0 27188 0 0 21727 0 0 21198 0 0 24991 0 0 26145 0 0 23627 0 0 23760 0 0 4111.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 58034000 0 58034000 0 NaN 2235 1258 914 914 4759 5076 5409 6013 5409 6013 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6696 5409 6013 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6696 5409 6013 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6696 Q6P2E9 918 Q6P2E9 Q6P2E9 Enhancer of mRNA-decapping protein 4 EDC4 sp|Q6P2E9|EDC4_HUMAN Enhancer of mRNA-decapping protein 4 OS=Homo sapiens GN=EDC4 PE=1 SV=1 0.843594 7.62253 0.0351485 50.806 17.86 50.806 2 S RLPAKDWKTKGSPRTSPKLKRKSKKDDGDAA X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX T(0.436)KGS(0.55)PRT(0.171)S(0.844)PK T(-1.32)KGS(1.32)PRT(-7.62)S(7.62)PK 8 3 -0.24958 0 25680 0 0 22050 0 0 27157 0 0 21036 0 0 20421 0 0 25130 0 0 26003 0 0 23373 0 0 23994 0 0 3792.4 0 0 24305 0 0 20824 0 0 27188 0 0 21727 0 0 21198 0 0 24991 0 0 26145 0 0 23627 0 0 23760 0 0 4111.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 58034000 0 58034000 0 NaN 2236 1258 918 918 4759 5076 5409 6013 5409 6013 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6696 5409 6013 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6696 5409 6013 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6696 Q6P4R8 226 Q6P4R8 Q6P4R8 Nuclear factor related to kappa-B-binding protein NFRKB sp|Q6P4R8|NFRKB_HUMAN Nuclear factor related to kappa-B-binding protein OS=Homo sapiens GN=NFRKB PE=1 SV=2 0.90436 9.75701 0.000396507 117.31 83.308 117.31 1 S DEEDLSSWLPSSPARSPSPAVPLRVVPTLST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(0.904)PS(0.096)PAVPLR S(9.76)PS(-9.76)PAVPLR 1 2 0.53937 14357 0 0 12427 0 0 15738 0 0 13935 0 0 14488 0 0 14772 0 0 16639 0 0 14078 0 0 12308 0 0 5212.4 0 0 13591 0 0 11748 0 0 15757 0 0 14230 0 0 14803 0 0 14770 0 0 16715 0 0 14305 0 0 12328 0 0 5233.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19508000 19508000 0 0 NaN 2237 1261 226 226 4184 4459 4752 5271 4752 5271 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11873 4752 5271 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11873 4752 5271 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11873 Q6P582 152 Q6P582 Q6P582 Mitotic-spindle organizing protein 2A MZT2A sp|Q6P582|MZT2A_HUMAN Mitotic-spindle organizing protein 2A OS=Homo sapiens GN=MZT2A PE=1 SV=2 0.830915 6.95874 0.000161838 115.3 93.293 115.3 1 S QPSATRLPKGGGPGKSPTQGST_________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPXXXXXXXXX GGGPGKS(0.831)PT(0.167)QGS(0.001)T(0.001) GGGPGKS(6.96)PT(-6.96)QGS(-30.72)T(-29.16) 7 2 1.5809 17379 0 0 18925 0 0 17388 0 0 19866 0 0 13257 0 0 16084 0 0 13267 0 0 19458 0 0 20720 0 0 10197 0 0 16445 0 0 17883 0 0 17458 0 0 20279 0 0 13705 0 0 16352 0 0 13708 0 0 19694 0 0 20128 0 0 10052 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9928300 9928300 0 0 NaN 2238 1262 152 152 1435 1512 1621 1791 1621 1791 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6874 1621 1791 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6874 1621 1791 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6874 Q6P6C2 361 Q6P6C2 Q6P6C2 RNA demethylase ALKBH5 ALKBH5 sp|Q6P6C2|ALKB5_HUMAN RNA demethylase ALKBH5 OS=Homo sapiens GN=ALKBH5 PE=1 SV=2 0.999599 33.973 1.04033E-07 172.06 141.58 172.06 1 S ENRRSVLLPTHRRRGSFSSENYWRKSYESSE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX RGS(1)FSSENYWR RGS(33.97)FS(-33.97)S(-65.76)ENY(-135.76)WR 3 3 -0.026683 30531 0 0 24718 0 0 31651 0 0 24415 0 0 33780 0 0 35130 0 0 39968 0 0 34761 0 0 25206 0 0 19960 0 0 28895 0 0 23349 0 0 31844 0 0 25260 0 0 34228 0 0 34767 0 0 39983 0 0 35483 0 0 25497 0 0 19599 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 99656000 99656000 0 0 NaN 2239 1263 361 361 1605;3250 1691;3447 1827;3683 2032;4086 3683 4086 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13505 3683 4086 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13505 3683 4086 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13505 Q6P6C2 371 Q6P6C2 Q6P6C2 RNA demethylase ALKBH5 ALKBH5 sp|Q6P6C2|ALKB5_HUMAN RNA demethylase ALKBH5 OS=Homo sapiens GN=ALKBH5 PE=1 SV=2 0.998641 28.7533 9.16526E-23 266.5 239.54 266.5 1 S HRRRGSFSSENYWRKSYESSEDCSEAAGSPA X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP KS(0.999)YES(0.001)SEDCSEAAGSPAR KS(28.75)Y(-127.3)ES(-28.75)S(-45.54)EDCS(-91.97)EAAGS(-160.88)PAR 2 3 -0.27473 14053 0 0 13815 0 0 15775 0 0 14430 0 0 14807 0 0 15615 0 0 14062 0 0 14797 0 0 14735 0 0 6776.1 0 0 13304 0 0 13054 0 0 15772 0 0 14797 0 0 15073 0 0 15601 0 0 14368 0 0 15079 0 0 14511 0 0 6723 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21708000 21708000 0 0 NaN 2240 1263 371 371 2242 2370 2551 2848 2551 2848 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8253 2551 2848 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8253 2551 2848 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8253 Q6PCB5 6 Q6PCB5 Q6PCB5 Round spermatid basic protein 1-like protein RSBN1L sp|Q6PCB5|RSBNL_HUMAN Round spermatid basic protein 1-like protein OS=Homo sapiens GN=RSBN1L PE=1 SV=2 1 71.9525 6.87252E-12 143.05 130.41 143.05 1 S __________MAEPPSPVHCVAAAAPTATVS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP AEPPS(1)PVHCVAAAAPTATVSEKEPFGK AEPPS(71.95)PVHCVAAAAPT(-71.95)AT(-84.16)VS(-95.46)EKEPFGK 5 4 0.39057 25771 0 0 30264 0 0 23577 0 0 29135 0 0 23392 0 0 24702 0 0 25856 0 0 27953 0 0 32879 0 0 14622 0 0 24378 0 0 28583 0 0 23869 0 0 29912 0 0 23790 0 0 25026 0 0 26393 0 0 28354 0 0 32144 0 0 14415 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 92326000 92326000 0 0 NaN 2241 1264 6 6 148 154 167 189 167 189 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18316 167 189 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18316 167 189 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18316 Q6PD62 970 Q6PD62 Q6PD62 RNA polymerase-associated protein CTR9 homolog CTR9 sp|Q6PD62|CTR9_HUMAN RNA polymerase-associated protein CTR9 homolog OS=Homo sapiens GN=CTR9 PE=1 SV=1 0.998606 28.5508 0.00816991 78.975 62.669 78.975 1 S RKKKKRRRHPKGEEGSDDDETENGPKPKKRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPXXX GEEGS(0.999)DDDET(0.001)ENGPKPK GEEGS(28.55)DDDET(-28.55)ENGPKPK 5 3 0.1582 22844 0 0 25311 0 0 24330 0 0 26272 0 0 39409 0 0 25487 0 0 39972 0 0 33828 0 0 29149 0 0 20260 0 0 21622 0 0 23916 0 0 24599 0 0 26904 0 0 39099 0 0 25724 0 0 40365 0 0 34220 0 0 29221 0 0 19860 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 17623000 17623000 0 0 NaN 2242 1265 970 970 1404 1480 1589 1756;1757 1589 1757 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8995 1589 1757 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8995 1589 1757 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8995 Q6PFW1 964 Q6PFW1 Q6PFW1 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 PPIP5K1 sp|Q6PFW1|VIP1_HUMAN Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 OS=Homo sapiens GN=PPIP5K1 PE=1 SV=1 0.5 0 0.0544996 50.425 39.163 50.425 1 S CPGKASDEPDRALQTSPQPPEGPGLPRRSPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ALQT(0.5)S(0.5)PQPPEGPGLPR ALQT(0)S(0)PQPPEGPGLPR 5 3 0.016225 10589 0 0 7986.6 0 0 8652.3 0 0 9835 0 0 8858.6 0 0 9888 0 0 8215 0 0 8248.8 0 0 8882.9 0 0 5806.1 0 0 10012 0 0 7555.2 0 0 8825 0 0 9986.3 0 0 8969.1 0 0 9899.2 0 0 8411.4 0 0 8512.7 0 0 8736.5 0 0 5658 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15943000 15943000 0 0 NaN 2243 1266 964 964 307 328 349 389 349 389 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14577 349 389 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14577 349 389 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14577 Q6PFW1 1152 Q6PFW1 Q6PFW1 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 PPIP5K1 sp|Q6PFW1|VIP1_HUMAN Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 OS=Homo sapiens GN=PPIP5K1 PE=1 SV=1 0.995654 23.6001 0.000146948 102.64 76.989 102.64 1 S SQASDNPFSPPRTLHSPPLQLQQRSEKPPWY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX T(0.004)LHS(0.996)PPLQLQQR T(-23.6)LHS(23.6)PPLQLQQR 4 3 -0.23935 8052.4 0 0 9907.6 0 0 9062 0 0 8707.5 0 0 10769 0 0 9562.8 0 0 9862.5 0 0 8943.6 0 0 10057 0 0 5937.8 0 0 7623.4 0 0 9352.5 0 0 9086 0 0 9027.6 0 0 10815 0 0 9550.5 0 0 10088 0 0 9174 0 0 9914.6 0 0 5798.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29633000 29633000 0 0 NaN 2244 1266 1152 1152 4770 5087 5420 6027 5420 6027 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13345 5420 6027 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13345 5420 6027 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13345 Q6PID6 197 Q6PID6 Q6PID6 Tetratricopeptide repeat protein 33 TTC33 sp|Q6PID6|TTC33_HUMAN Tetratricopeptide repeat protein 33 OS=Homo sapiens GN=TTC33 PE=1 SV=2 0.998567 28.4392 0.00309221 93.269 73.875 93.269 1 S QRIKKSEAPAEVTHFSPKSIPDYDFESDEIV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPXXXXXXXXXXXXX KSEAPAEVT(0.001)HFS(0.999)PK KS(-56.68)EAPAEVT(-28.44)HFS(28.44)PK 12 4 0.74034 10814 0 0 11576 0 0 10793 0 0 11561 0 0 10411 0 0 11160 0 0 13452 0 0 12284 0 0 12024 0 0 2323.3 0 0 10232 0 0 10936 0 0 10870 0 0 11865 0 0 10630 0 0 11223 0 0 13508 0 0 12348 0 0 11925 0 0 2471.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15806000 15806000 0 0 NaN 2245 1267 197 197 2210 2336 2517 2810 2517 2810 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12669 2517 2810 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12669 2517 2810 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12669 Q6PIY7 95 Q6PIY7 Q6PIY7 Poly(A) RNA polymerase GLD2 PAPD4 sp|Q6PIY7|GLD2_HUMAN Poly(A) RNA polymerase GLD2 OS=Homo sapiens GN=PAPD4 PE=1 SV=1 0.998917 29.6495 5.82649E-10 175.85 152.75 175.85 1 S DEKNLPLDGKRQRFHSPHQEPTVVNQIVPLS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP FHS(0.999)PHQEPT(0.001)VVNQIVPLSGER FHS(29.65)PHQEPT(-29.65)VVNQIVPLS(-146.72)GER 3 3 1.2548 4348.5 0 0 6971.5 0 0 6291.6 0 0 6883.4 0 0 4325.4 0 0 6177.5 0 0 5657.8 0 0 6435.1 0 0 7734.9 0 0 22593 0 0 4122.1 0 0 6585.2 0 0 6202.1 0 0 7061.7 0 0 4526.3 0 0 6269.3 0 0 5752.1 0 0 7125.7 0 0 7543.9 0 0 21423 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13248000 13248000 0 0 NaN 2246 1268 95 95 1273 1340 1442 1599 1442 1599 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16879 1442 1599 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16879 1442 1599 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16879 Q6PJG2 632 Q6PJG2 Q6PJG2 ELM2 and SANT domain-containing protein 1 ELMSAN1 sp|Q6PJG2|EMSA1_HUMAN ELM2 and SANT domain-containing protein 1 OS=Homo sapiens GN=ELMSAN1 PE=1 SV=2 0.521767 0.447956 6.75245E-12 185.72 160.11 185.72 1 S TFIAPPVYSNITPYQSHLRSPVRLADHPSER X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPXXXXXXXX AGTFIAPPVYSNIT(0.007)PYQS(0.522)HLRS(0.471)PVR AGT(-124.98)FIAPPVY(-63.71)S(-36.56)NIT(-18.43)PY(-83.06)QS(0.45)HLRS(-0.45)PVR 18 4 -0.27383 3962.5 0 0 6458.3 0 0 4886.9 0 0 5126.2 0 0 6808.7 0 0 5192.7 0 0 7469.2 0 0 6040.3 0 0 5406.5 0 0 16725 0 0 3753 0 0 6093.3 0 0 4892.5 0 0 5345.8 0 0 6803.4 0 0 5244 0 0 7514.8 0 0 6529.9 0 0 5422 0 0 15888 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29040000 29040000 0 0 NaN 2247 1269 632 632 233 247 265 296 265 296 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19089 265 296 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19089 265 296 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19089 Q6PJG2 461 Q6PJG2 Q6PJG2 ELM2 and SANT domain-containing protein 1 ELMSAN1 sp|Q6PJG2|EMSA1_HUMAN ELM2 and SANT domain-containing protein 1 OS=Homo sapiens GN=ELMSAN1 PE=1 SV=2 1 75.5597 2.19876E-10 178.72 114.52 178.72 1 S LRGGVIQSTRRRRRASQEANLLTLAQKAVEL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX RAS(1)QEANLLTLAQK RAS(75.56)QEANLLT(-75.56)LAQK 3 3 0.46391 8420.2 0 0 14633 0 0 8481.3 0 0 14686 0 0 21559 0 0 7704.4 0 0 23186 0 0 17186 0 0 19046 0 0 5674.8 0 0 7967.9 0 0 13824 0 0 8699.8 0 0 14964 0 0 21125 0 0 8163.7 0 0 23410 0 0 17042 0 0 18968 0 0 5741.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 88127000 88127000 0 0 NaN 2248 1269 461 461 3198 3392 3626 4022 3626 4022 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18265 3626 4022 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18265 3626 4022 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18265 Q6PJG2 661 Q6PJG2 Q6PJG2 ELM2 and SANT domain-containing protein 1 ELMSAN1 sp|Q6PJG2|EMSA1_HUMAN ELM2 and SANT domain-containing protein 1 OS=Homo sapiens GN=ELMSAN1 PE=1 SV=2 0.996028 24.0294 0.00175425 99.387 85.657 99.387 2 S ERSFELPPYTPPPILSPVREGSGLYFNAIIS X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPXXXXXXXXXXXX S(0.001)FELPPY(0.015)T(0.987)PPPILS(0.996)PVR S(-28.94)FELPPY(-19.33)T(19.33)PPPILS(24.03)PVR 14 3 -0.025531 0 5324.8 0 0 5573.9 0 0 5362.7 0 0 6226.4 0 0 7173.8 0 0 6461.7 0 0 5853.1 0 0 6199.2 0 0 6553.1 0 0 37772 0 0 5038.8 0 0 5269.2 0 0 5417.4 0 0 6357 0 0 7155.1 0 0 6534.2 0 0 6040.5 0 0 7366.6 0 0 6436.2 0 0 35710 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 20855000 0 20855000 0 NaN 2249 1269 661 661 3738 3978 4242 4715 4242 4715 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23881 4242 4715 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23881 4242 4715 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23881 Q6PJG6 742 Q6PJG6 Q6PJG6 BRCA1-associated ATM activator 1 BRAT1 sp|Q6PJG6|BRAT1_HUMAN BRCA1-associated ATM activator 1 OS=Homo sapiens GN=BRAT1 PE=1 SV=2 0.96127 13.9488 3.32384E-10 177.07 151.43 177.07 1 S RDKIASYSSLREARGSPNTASAEATLPRWRA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPXXX GS(0.961)PNT(0.039)ASAEATLPR GS(13.95)PNT(-13.95)AS(-56.44)AEAT(-52.22)LPR 2 2 -1.0615 16870 0 0 19861 0 0 16893 0 0 18754 0 0 12276 0 0 16154 0 0 13192 0 0 15593 0 0 20110 0 0 9540.8 0 0 15963 0 0 18756 0 0 16954 0 0 19282 0 0 12750 0 0 16319 0 0 13573 0 0 15950 0 0 19549 0 0 9344.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30145000 30145000 0 0 NaN 2250 1270 742 742 1622 1709 1848 2060 1848 2060 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11294 1848 2060 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11294 1848 2060 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11294 Q6PJT7 515 Q6PJT7 Q6PJT7 Zinc finger CCCH domain-containing protein 14 ZC3H14 sp|Q6PJT7|ZC3HE_HUMAN Zinc finger CCCH domain-containing protein 14 OS=Homo sapiens GN=ZC3H14 PE=1 SV=1 1 129.319 3.80578E-05 129.32 98.321 129.32 1 S HLMQTRDLVQPDKPASPKFIVTLDGVPSPPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX DLVQPDKPAS(1)PK DLVQPDKPAS(129.32)PK 10 3 0.4937 36275 0 0 40929 0 0 35583 0 0 41690 0 0 32435 0 0 31082 0 0 33195 0 0 35854 0 0 44935 0 0 7589.5 0 0 34322 0 0 38669 0 0 35833 0 0 42589 0 0 33123 0 0 31702 0 0 34075 0 0 36007 0 0 43840 0 0 7976.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 180260000 180260000 0 0 NaN 2251 1271 515 515 752 796 847 934 847 934 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12767 847 934 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12767 847 934 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12767 Q6PJT7 620 Q6PJT7 Q6PJT7 Zinc finger CCCH domain-containing protein 14 ZC3H14 sp|Q6PJT7|ZC3HE_HUMAN Zinc finger CCCH domain-containing protein 14 OS=Homo sapiens GN=ZC3H14 PE=1 SV=1 0.999843 38.049 0.00608489 84.975 67.896 84.975 1 S PACKNGDECAYHHPISPCKAFPNCKFAEKCL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX NGDECAYHHPIS(1)PCK NGDECAY(-38.05)HHPIS(38.05)PCK 12 3 -0.50765 17132 0 0 18513 0 0 17498 0 0 17625 0 0 13510 0 0 19544 0 0 17505 0 0 17851 0 0 20342 0 0 13819 0 0 16213 0 0 17483 0 0 17557 0 0 18182 0 0 14004 0 0 19509 0 0 17705 0 0 18387 0 0 19951 0 0 13425 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12025000 12025000 0 0 NaN 2252 1271 620 620 2814 2984 3197 3549 3197 3549 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8871 3197 3549 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8871 3197 3549 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8871 Q6PJT7 135 Q6PJT7 Q6PJT7 Zinc finger CCCH domain-containing protein 14 ZC3H14 sp|Q6PJT7|ZC3HE_HUMAN Zinc finger CCCH domain-containing protein 14 OS=Homo sapiens GN=ZC3H14 PE=1 SV=1 0.867718 9.12001 0.0515189 48.822 21.568 48.822 1 S PSARPEKRDSRVSTSSQESKTTNVRQTYDDG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX VS(0.005)T(0.003)S(0.106)S(0.868)QES(0.019)K VS(-22.81)T(-24.75)S(-9.12)S(9.12)QES(-16.7)K 5 2 1.2028 20875 0 0 17848 0 0 19552 0 0 17217 0 0 23831 0 0 18474 0 0 23436 0 0 22190 0 0 19566 0 0 7975 0 0 19748 0 0 16857 0 0 19816 0 0 17737 0 0 23922 0 0 18523 0 0 23769 0 0 22354 0 0 19469 0 0 8023 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22500000 22500000 0 0 NaN 2253 1271 135 135 5283 5630 6001 6667 6001 6667 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7667 6001 6667 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7667 6001 6667 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7667 Q6PK04 19 Q6PK04 Q6PK04 Coiled-coil domain-containing protein 137 CCDC137 sp|Q6PK04|CC137_HUMAN Coiled-coil domain-containing protein 137 OS=Homo sapiens GN=CCDC137 PE=1 SV=1 1 99.3184 0.00169745 99.318 40.12 99.318 1 S AGRGAAVSRVQAGPGSPRRARGRQQVQPLGK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX VQAGPGS(1)PR VQAGPGS(99.32)PR 7 2 -0.22835 25462 0 0 27116 0 0 22970 0 0 26605 0 0 16312 0 0 24191 0 0 18598 0 0 25162 0 0 28810 0 0 4142 0 0 24084 0 0 25613 0 0 23195 0 0 27310 0 0 16989 0 0 24375 0 0 19101 0 0 25327 0 0 27994 0 0 4482.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30615000 30615000 0 0 NaN 2254 1272 19 19 5217 5561 5925 6583 5925 6583 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6815 5925 6583 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6815 5925 6583 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6815 Q6PKG0 1056 Q6PKG0 Q6PKG0 La-related protein 1 LARP1 sp|Q6PKG0|LARP1_HUMAN La-related protein 1 OS=Homo sapiens GN=LARP1 PE=1 SV=2 0.995559 25.3934 1.48052E-05 132.99 119.44 132.99 1 S VVAGGGGGEGRKRCPSQSSSRPAAMISQPPT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP CPS(0.996)QS(0.003)S(0.001)S(0.001)RPAAMISQPPTPPTGQPVREDAK CPS(25.39)QS(-25.39)S(-31.05)S(-31.05)RPAAMIS(-73.24)QPPT(-100.8)PPT(-118.18)GQPVREDAK 3 4 0.46255 8548 0 0 6720.9 0 0 8394.4 0 0 7271.4 0 0 7603 0 0 10975 0 0 7983.4 0 0 8186 0 0 7118.3 0 0 6183.8 0 0 8088 0 0 6352.1 0 0 8452.5 0 0 7491.9 0 0 7766.8 0 0 10812 0 0 8084.4 0 0 8505.5 0 0 7060.4 0 0 6012.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25863000 25863000 0 0 NaN 2255 1273 1056 1056 617 656 699 775 699 775 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13249 699 775 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13249 699 775 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13249 Q6PKG0 90 Q6PKG0 Q6PKG0 La-related protein 1 LARP1 sp|Q6PKG0|LARP1_HUMAN La-related protein 1 OS=Homo sapiens GN=LARP1 PE=1 SV=2 1 93.6162 1.29386E-18 230.62 214.44 230.62 1 S SPRPLQLPGAEGPAISDGEEGGGEPGAGGGA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR ES(-93.62)PRPLQLPGAEGPAIS(93.62)DGEEGGGEPGAGGGAAGAAGAGR 17 4 -0.68077 12104 0 0 18123 0 0 9124.4 0 0 15549 0 0 17178 0 0 10668 0 0 13338 0 0 15099 0 0 21537 0 0 75164 0 0 11442 0 0 17105 0 0 9450.4 0 0 16044 0 0 16911 0 0 11108 0 0 13986 0 0 17238 0 0 20903 0 0 71125 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 92178000 92178000 0 0 NaN 2256 1273 90 90 1161 1222 1319 1458 1319 1458 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15895 1319 1458 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15895 1319 1458 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15895 Q6PKG0 521 Q6PKG0 Q6PKG0 La-related protein 1 LARP1 sp|Q6PKG0|LARP1_HUMAN La-related protein 1 OS=Homo sapiens GN=LARP1 PE=1 SV=2 1 77.2575 1.92208E-09 180.47 126.9 180.47 1 S VPRQHYQKETESAPGSPRAVTPVPTKTEEVS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX ETESAPGS(1)PR ET(-125.98)ES(-77.26)APGS(77.26)PR 8 2 0.28383 9681.3 0 0 12377 0 0 9336.6 0 0 10955 0 0 10133 0 0 10756 0 0 9270.5 0 0 10159 0 0 12872 0 0 3303.2 0 0 9159.7 0 0 11684 0 0 9429.4 0 0 11332 0 0 10227 0 0 10789 0 0 9576.6 0 0 10313 0 0 12548 0 0 3345.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29118000 29118000 0 0 NaN 2257 1273 521 521 1184 1245 1343 1487 1343 1487 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5834 1343 1487 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5834 1343 1487 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5834 Q6PKG0 548 Q6PKG0 Q6PKG0 La-related protein 1 LARP1 sp|Q6PKG0|LARP1_HUMAN La-related protein 1 OS=Homo sapiens GN=LARP1 PE=1 SV=2 0.998436 28.0521 2.02916E-23 284.72 249.1 284.72 1 S EEVSNLKTLPKGLSASLPDLDSENWIEVKKR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPXX GLS(0.002)AS(0.998)LPDLDSENWIEVK GLS(-28.05)AS(28.05)LPDLDS(-68.43)ENWIEVK 5 2 0.37859 11189 0 0 12885 0 0 11761 0 0 10364 0 0 9274 0 0 12820 0 0 9689.6 0 0 13680 0 0 11035 0 0 143850 0 0 10589 0 0 12158 0 0 11780 0 0 10834 0 0 9565.3 0 0 13022 0 0 9880.1 0 0 18024 0 0 10831 0 0 135770 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 32434000 32434000 0 0 NaN 2258 1273 548 548 1510 1590 1719 1911 1719 1911 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23621 1719 1911 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23621 1719 1911 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23621 Q6PKG0 824 Q6PKG0 Q6PKG0 La-related protein 1 LARP1 sp|Q6PKG0|LARP1_HUMAN La-related protein 1 OS=Homo sapiens GN=LARP1 PE=1 SV=2 0.950199 12.8066 2.14854E-11 204.33 164.31 193.5 1 S TLDAKMPRKRKTRHSSNPPLESHVGWVMDSR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP HS(0.05)S(0.95)NPPLESHVGWVMDSR HS(-12.81)S(12.81)NPPLES(-50.03)HVGWVMDS(-163.65)R 3 3 -1.4907 54088 0 0 45124 0 0 58709 0 0 48639 0 0 64769 0 0 58142 0 0 57498 0 0 53689 0 0 46307 0 0 68505 0 0 51198 0 0 42647 0 0 58912 0 0 49879 0 0 65257 0 0 57927 0 0 58571 0 0 56090 0 0 46166 0 0 65748 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 112710000 112710000 0 0 NaN 2259 1273 824 824 1753 1850;1851 1996;1997 2224;2225;2226 1996 2224 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12703 1997 2226 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15475 1997 2226 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15475 Q6PKG0 143 Q6PKG0 Q6PKG0 La-related protein 1 LARP1 sp|Q6PKG0|LARP1_HUMAN La-related protein 1 OS=Homo sapiens GN=LARP1 PE=1 SV=2 1 67.4228 6.2077E-25 281.47 251.33 281.47 1 S TKNALPPVLTTVNGQSPPEHSAPAKVVRAAV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPPPPPXXXXXX NALPPVLTTVNGQS(1)PPEHSAPAK NALPPVLT(-92.66)T(-76.58)VNGQS(67.42)PPEHS(-67.42)APAK 14 3 -0.81551 10019 0 0 11033 0 0 9059.3 0 0 12145 0 0 9744.2 0 0 10493 0 0 10203 0 0 11712 0 0 12708 0 0 18411 0 0 9476.9 0 0 10429 0 0 9186.6 0 0 12376 0 0 9856.8 0 0 10642 0 0 10433 0 0 12256 0 0 12433 0 0 17607 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 63366000 63366000 0 0 NaN 2260 1273 143 143 2773 2942 3152 3502 3152 3502 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17311 3152 3502 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17311 3152 3502 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17311 Q6PKG0 627 Q6PKG0 Q6PKG0 La-related protein 1 LARP1 sp|Q6PKG0|LARP1_HUMAN La-related protein 1 OS=Homo sapiens GN=LARP1 PE=1 SV=2 0.999993 53.7676 8.5692E-13 210.45 195.41 210.45 1 S EMEQMDGRKNTFTAWSDEESDYEIDDRDVNK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPPPP NTFTAWS(1)DEESDYEIDDRDVNK NT(-89.23)FT(-55.24)AWS(53.77)DEES(-53.77)DY(-141.05)EIDDRDVNK 7 3 0.70042 4704.2 0 0 5645.1 0 0 5296.9 0 0 5509.2 0 0 4850.1 0 0 4190.4 0 0 5265.6 0 0 6168.4 0 0 5101.7 0 0 105680 0 0 4453.6 0 0 5332 0 0 5294.9 0 0 5643.8 0 0 4954 0 0 4482.9 0 0 5335.4 0 0 9295.1 0 0 5040.8 0 0 99653 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 26339000 26339000 0 0 NaN 2261 1273 627 627 2946 3125 3346 3710;3711 3346 3711 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18370 3346 3711 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18370 3346 3711 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18370 Q6PKG0 1040 Q6PKG0 Q6PKG0 La-related protein 1 LARP1 sp|Q6PKG0|LARP1_HUMAN La-related protein 1 OS=Homo sapiens GN=LARP1 PE=1 SV=2 1 153.356 6.21498E-07 153.36 117.81 153.36 1 S RVDPPMGEEGNHKRHSVVAGGGGGEGRKRCP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX RHS(1)VVAGGGGGEGR RHS(153.36)VVAGGGGGEGR 3 3 -0.049197 2529.4 0 0 573.03 0 0 1926.3 0 0 1008.2 0 0 1419.6 0 0 2131.4 0 0 2166.8 0 0 1392.8 0 0 397.06 0 0 1262.6 0 0 2391.2 0 0 543.8 0 0 1969.6 0 0 1026.7 0 0 1479.4 0 0 2079.4 0 0 2121.2 0 0 1463.7 0 0 466.84 0 0 1221.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7531000 7531000 0 0 NaN 2262 1273 1040 1040 3267 3465 3702 4111 3702 4111 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4865 3702 4111 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4865 3702 4111 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4865 Q6PKG0 766 Q6PKG0 Q6PKG0 La-related protein 1 LARP1 sp|Q6PKG0|LARP1_HUMAN La-related protein 1 OS=Homo sapiens GN=LARP1 PE=1 SV=2 1 90.3134 4.1582E-22 257.52 214.8 257.52 1;2 S ANKLFGAPEPSTIARSLPTTVPESPNYRNTR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX S(1)LPTTVPES(1)PNYR S(90.31)LPT(-48.27)T(-45.69)VPES(45.69)PNY(-117.52)R 1 2 -0.24953 18467 6359.4 0 26574 7357.2 0 19895 6507.2 0 27383 7150.4 0 30885 10181 0 19620 6371.2 0 34253 9595 0 31227 9055.2 0 30218 7010.6 0 32320 17625 0 17480 6018.2 0 25108 6948.9 0 20092 6587.7 0 27942 7341.9 0 30737 10104 0 20219 6487.8 0 34594 9724.2 0 31847 9510.1 0 29987 7026.9 0 31156 16806 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 51342000 32546000 18796000 0 NaN 2263 1273 766 766 3968 4227;4228 4511;4512 5013;5014;5015 4512 5015 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15140 4512 5015 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15140 4512 5015 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15140 Q6PKG0 774 Q6PKG0 Q6PKG0 La-related protein 1 LARP1 sp|Q6PKG0|LARP1_HUMAN La-related protein 1 OS=Homo sapiens GN=LARP1 PE=1 SV=2 0.999958 45.6925 4.1582E-22 257.52 214.8 257.52 1;2 S EPSTIARSLPTTVPESPNYRNTRTPRTPRTP X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X XXXXXXXPPPPPPPPPPPPPXXXXXXXXXXX S(1)LPTTVPES(1)PNYR S(90.31)LPT(-48.27)T(-45.69)VPES(45.69)PNY(-117.52)R 9 2 -0.24953 5289.1 6359.4 0 5881 7357.2 0 5856.6 6507.2 0 6209.8 7150.4 0 7757.9 10181 0 6731 6371.2 0 7281 9595 0 6887.5 9055.2 0 6259.4 7010.6 0 2636.1 17625 0 5006.9 6018.2 0 5557.4 6948.9 0 5887 6587.7 0 6364.3 7341.9 0 7752.8 10104 0 6730.5 6487.8 0 7406.3 9724.2 0 6982 9510.1 0 6219.5 7026.9 0 2641.6 16806 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 329300000 310510000 18796000 0 NaN 2264 1273 774 774 3968 4227;4228 4510;4512 5012;5015 4512 5015 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15140 4512 5015 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15140 4512 5015 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15140 Q6PKG0 847 Q6PKG0 Q6PKG0 La-related protein 1 LARP1 sp|Q6PKG0|LARP1_HUMAN La-related protein 1 OS=Homo sapiens GN=LARP1 PE=1 SV=2 0.785373 5.92106 1.40712E-08 173.09 150.66 173.09 1 S VGWVMDSREHRPRTASISSSPSEGTPTVGSY X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP T(0.201)AS(0.785)IS(0.014)SSPSEGTPTVGSYGCTPQSLPK T(-5.92)AS(5.92)IS(-17.59)S(-42.32)S(-53.12)PS(-79.69)EGT(-109.32)PT(-141.46)VGS(-140.61)Y(-142.75)GCT(-146.93)PQS(-164.76)LPK 3 4 -0.28973 16086 0 0 10192 0 0 17709 0 0 8683.6 0 0 10338 0 0 18195 0 0 11239 0 0 15745 0 0 9992.2 0 0 8385.8 0 0 15227 0 0 9619.9 0 0 17650 0 0 9161 0 0 10938 0 0 17798 0 0 11363 0 0 16141 0 0 9912.2 0 0 8260.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 104160000 104160000 0 0 NaN 2265 1273 847 847 4632 4941 5263 5846 5263 5846 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16361 5263 5846 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16361 5263 5846 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16361 Q6PL18 327 Q6PL18 Q6PL18 ATPase family AAA domain-containing protein 2 ATAD2 sp|Q6PL18|ATAD2_HUMAN ATPase family AAA domain-containing protein 2 OS=Homo sapiens GN=ATAD2 PE=1 SV=1 0.999965 44.5657 7.63282E-07 146.89 128.74 146.89 1 S PRHQRKPNIFYSGPASPARPRYRLSSAGPRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY) XXXXXPPPPPPPPPPPPPPPPXXXXXXXXXX KPNIFYSGPAS(1)PARPR KPNIFY(-106.65)S(-44.57)GPAS(44.57)PARPR 11 3 0.68645 23065 0 0 15851 0 0 23086 0 0 15879 0 0 11132 0 0 22486 0 0 10610 0 0 16286 0 0 16394 0 0 10922 0 0 21825 0 0 14974 0 0 23097 0 0 16408 0 0 12001 0 0 22186 0 0 10983 0 0 16906 0 0 15930 0 0 10661 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 154170000 154170000 0 0 NaN 2266 1274 327 327 2158 2280 2454 2733 2454 2733 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14369 2454 2733 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14369 2454 2733 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14369 Q6PL18 41 Q6PL18 Q6PL18 ATPase family AAA domain-containing protein 2 ATAD2 sp|Q6PL18|ATAD2_HUMAN ATPase family AAA domain-containing protein 2 OS=Homo sapiens GN=ATAD2 PE=1 SV=1 1 147.415 4.04339E-06 147.42 98.674 147.42 1 S SDFLSLEHIGRRRLRSAGAAQKKPAATTAKA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX LRS(1)AGAAQK LRS(147.42)AGAAQK 3 3 0.46827 35493 0 0 8543.4 0 0 39521 0 0 7283.6 0 0 7617.7 0 0 38503 0 0 8443.9 0 0 18773 0 0 8175 0 0 1749.6 0 0 33600 0 0 8063.5 0 0 39174 0 0 8057.1 0 0 9625.6 0 0 36956 0 0 8548.2 0 0 19648 0 0 8077.7 0 0 2082 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 31767000 31767000 0 0 NaN 2267 1274 41 41 2539 2683 2880 3212 2880 3212 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8061 2880 3212 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8061 2880 3212 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8061 Q6PL18 337 Q6PL18 Q6PL18 ATPase family AAA domain-containing protein 2 ATAD2 sp|Q6PL18|ATAD2_HUMAN ATPase family AAA domain-containing protein 2 OS=Homo sapiens GN=ATAD2 PE=1 SV=1 0.826571 6.8372 0.00835964 79.326 54.534 79.326 2 S YSGPASPARPRYRLSSAGPRSPYCKRMNRRR X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX LS(0.173)S(0.827)AGPRS(0.958)PY(0.042)CK LS(-6.84)S(6.84)AGPRS(13.8)PY(-13.8)CK 3 3 0.063337 0 17528 0 0 8851.5 0 0 19256 0 0 10197 0 0 8694.4 0 0 20024 0 0 8009.7 0 0 13082 0 0 11376 0 0 5349.3 0 0 16592 0 0 8369.4 0 0 19159 0 0 10546 0 0 9440.2 0 0 19555 0 0 8278.3 0 0 13552 0 0 11082 0 0 5339.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 15615000 0 15615000 0 NaN 2268 1274 337 337 2587 2731;2732 2930 3264 2930 3264 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12118 2930 3264 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12118 2930 3264 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12118 Q6PL18 342 Q6PL18 Q6PL18 ATPase family AAA domain-containing protein 2 ATAD2 sp|Q6PL18|ATAD2_HUMAN ATPase family AAA domain-containing protein 2 OS=Homo sapiens GN=ATAD2 PE=1 SV=1 0.995782 24.5154 0.000141442 103.6 81.39 103.6 1;2 S SPARPRYRLSSAGPRSPYCKRMNRRRHAIHS Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX LSS(0.001)AGPRS(0.996)PY(0.004)CK LS(-42.51)S(-31.91)AGPRS(24.52)PY(-24.52)CK 8 3 -0.08421 49924 17528 0 24011 8851.5 0 54627 19256 0 22816 10197 0 14385 8694.4 0 52458 20024 0 17349 8009.7 0 29639 13082 0 27574 11376 0 6524.4 5349.3 0 47258 16592 0 22675 8369.4 0 54249 19159 0 23976 10546 0 17026 9440.2 0 50984 19555 0 17797 8278.3 0 30811 13552 0 26774 11082 0 6829.5 5339.8 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 103320000 87707000 15615000 0 NaN 2269 1274 342 342 2587 2731;2732 2929;2930 3263;3264 2929 3263 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11066 2929 3263 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11066 2929 3263 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11066 Q6PL18 1243 Q6PL18 Q6PL18 ATPase family AAA domain-containing protein 2 ATAD2 sp|Q6PL18|ATAD2_HUMAN ATPase family AAA domain-containing protein 2 OS=Homo sapiens GN=ATAD2 PE=1 SV=1 0.995914 23.8687 1.48109E-22 252.47 232.02 252.47 1 S KQQNASESKLELRNNSNTCNIENELEDSRKT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX NNS(0.996)NT(0.004)CNIENELEDSRK NNS(23.87)NT(-23.87)CNIENELEDS(-188.83)RK 3 3 -0.31844 21878 0 0 13330 0 0 24163 0 0 14656 0 0 11556 0 0 22528 0 0 9806.2 0 0 17854 0 0 15909 0 0 10258 0 0 20710 0 0 12600 0 0 24042 0 0 15094 0 0 12453 0 0 22190 0 0 10233 0 0 18399 0 0 15438 0 0 10072 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25025000 25025000 0 0 NaN 2270 1274 1243 1243 2878 3051 3268 3624 3268 3624 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14718 3268 3624 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14718 3268 3624 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14718 Q6R327 1302 Q6R327 Q6R327 Rapamycin-insensitive companion of mTOR RICTOR sp|Q6R327|RICTR_HUMAN Rapamycin-insensitive companion of mTOR OS=Homo sapiens GN=RICTOR PE=1 SV=1 0.999991 50.5473 6.40156E-07 138.97 120.35 138.97 1 S LVPPGSSHTLPRRAQSLKAPSIATIKSLADC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX AQS(1)LKAPSIATIK AQS(50.55)LKAPS(-50.55)IAT(-92.82)IK 3 3 0.093627 16456 0 0 15079 0 0 16209 0 0 16572 0 0 15537 0 0 18855 0 0 14657 0 0 16186 0 0 18057 0 0 7995.2 0 0 15570 0 0 14253 0 0 16326 0 0 16962 0 0 15797 0 0 18779 0 0 15055 0 0 16580 0 0 17673 0 0 7903 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20884000 20884000 0 0 NaN 2271 1275 1302 1302 399 427 462 513 462 513 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17159 462 513 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17159 462 513 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17159 Q6SPF0 161 Q6SPF0 Q6SPF0 Atherin SAMD1 sp|Q6SPF0|SAMD1_HUMAN Atherin OS=Homo sapiens GN=SAMD1 PE=1 SV=1 0.999999 62.2237 1.77684E-05 129.2 104.15 129.2 1 S ARAPRAAAAAATAPPSPGPAQPGPRAQRAAP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPXXXXXX AAAAAATAPPS(1)PGPAQPGPR AAAAAAT(-62.22)APPS(62.22)PGPAQPGPR 11 3 1.7313 20554 0 0 19546 0 0 21252 0 0 19963 0 0 20342 0 0 23419 0 0 17194 0 0 23274 0 0 21380 0 0 5222.4 0 0 19452 0 0 18467 0 0 21343 0 0 20527 0 0 20657 0 0 23327 0 0 17768 0 0 23508 0 0 20918 0 0 5456.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 80082000 80082000 0 0 NaN 2272 1276 161 161 2 3 6 13 6 13 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9517 6 13 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9517 6 13 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9517 Q6SPF0 425 Q6SPF0 Q6SPF0 Atherin SAMD1 sp|Q6SPF0|SAMD1_HUMAN Atherin OS=Homo sapiens GN=SAMD1 PE=1 SV=1 0.497958 0 0.0408921 47.132 38.294 47.132 S MNKEGGTASVATGPDSPSPVPLPPGKPALPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPPPPPPPP EGGTASVAT(0.003)GPDS(0.498)PS(0.498)PVPLPPGKPALPGADGT(0.001)PFGCPPGR EGGT(-37.56)AS(-35.49)VAT(-22.25)GPDS(0)PS(0)PVPLPPGKPALPGADGT(-27.46)PFGCPPGR 13 4 2.6476 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2273 1276 425 425 963 1017 1102 1217 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20568 1102 1217 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20568 1102 1217 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20568 Q6SPF0 427 Q6SPF0 Q6SPF0 Atherin SAMD1 sp|Q6SPF0|SAMD1_HUMAN Atherin OS=Homo sapiens GN=SAMD1 PE=1 SV=1 0.497958 0 0.0408921 47.132 38.294 47.132 S KEGGTASVATGPDSPSPVPLPPGKPALPGAD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EGGTASVAT(0.003)GPDS(0.498)PS(0.498)PVPLPPGKPALPGADGT(0.001)PFGCPPGR EGGT(-37.56)AS(-35.49)VAT(-22.25)GPDS(0)PS(0)PVPLPPGKPALPGADGT(-27.46)PFGCPPGR 15 4 2.6476 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2274 1276 427 427 963 1017 1102 1217 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20568 1102 1217 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20568 1102 1217 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20568 Q6T4P5 348 Q6T4P5 Q6T4P5 Lipid phosphate phosphatase-related protein type 3 LPPR3 sp|Q6T4P5|LPPR3_HUMAN Lipid phosphate phosphatase-related protein type 3 OS=Homo sapiens GN=LPPR3 PE=2 SV=1 0.935293 12.5142 0.0418623 45.603 20.129 45.603 1 S EGAPRPVAREKTSLGSLKRASVDVDLLAPRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX T(0.012)S(0.052)LGS(0.935)LKR T(-18.82)S(-12.51)LGS(12.51)LKR 5 3 -0.26488 28153 0 0 12487 0 0 30711 0 0 12132 0 0 4917.8 0 0 29934 0 0 6304.5 0 0 17264 0 0 13414 0 0 1613 0 0 26650 0 0 11794 0 0 30464 0 0 12765 0 0 6539.8 0 0 29054 0 0 6545.6 0 0 17856 0 0 12934 0 0 1918.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15031000 15031000 0 0 NaN 2275 1277 348 348 4923 5248 5591 6213 5591 6213 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12205 5591 6213 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12205 5591 6213 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12205 Q6U841;Q9Y6M7 238;233 Q6U841 Q6U841 Sodium-driven chloride bicarbonate exchanger;Sodium bicarbonate cotransporter 3 SLC4A10;SLC4A7 sp|Q6U841|S4A10_HUMAN Sodium-driven chloride bicarbonate exchanger OS=Homo sapiens GN=SLC4A10 PE=2 SV=1;sp|Q9Y6M7|S4A7_HUMAN Sodium bicarbonate cotransporter 3 OS=Homo sapiens GN=SLC4A7 PE=1 SV=2 1 111.652 0.00173849 111.65 23.516 111.65 1 S HQNQKKLTNRIPIVRSFADIGKKQSEPNSMD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX S(1)FADIGK S(111.65)FADIGK 1 2 0.46244 19588 0 0 16232 0 0 18629 0 0 18041 0 0 22939 0 0 18411 0 0 21934 0 0 19767 0 0 19794 0 0 5557.6 0 0 18532 0 0 15344 0 0 18864 0 0 18420 0 0 23008 0 0 18466 0 0 22316 0 0 19943 0 0 19622 0 0 5690.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26272000 26272000 0 0 NaN 2276 1278 238 238 3730 3971 4235 4708 4235 4708 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16245 4235 4708 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16245 4235 4708 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16245 Q6UB98 1189 Q6UB98 Q6UB98 Ankyrin repeat domain-containing protein 12 ANKRD12 sp|Q6UB98|ANR12_HUMAN Ankyrin repeat domain-containing protein 12 OS=Homo sapiens GN=ANKRD12 PE=1 SV=3 0.909218 10.0411 0.0193226 60.034 23.923 60.034 1 S TLGKSSFVSDNSLNRSPRSENEKPGLSSRSV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPXXXXXXXXXXXXX SSFVS(0.001)DNS(0.09)LNRS(0.909)PR S(-39.38)S(-39.38)FVS(-32.54)DNS(-10.04)LNRS(10.04)PR 12 3 0.84604 10899 0 0 10631 0 0 11573 0 0 9787.1 0 0 8953.7 0 0 11111 0 0 7369.2 0 0 9498.2 0 0 11607 0 0 4574.2 0 0 10316 0 0 10038 0 0 11580 0 0 10122 0 0 9222.5 0 0 11067 0 0 7693.3 0 0 9727.8 0 0 11273 0 0 4527 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13314000 13314000 0 0 NaN 2277 1279 1189 1189 4344 4630 4933 5477 4933 5477 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11218 4933 5477 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11218 4933 5477 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11218 Q6UB99 276 Q6UB99 Q6UB99 Ankyrin repeat domain-containing protein 11 ANKRD11 sp|Q6UB99|ANR11_HUMAN Ankyrin repeat domain-containing protein 11 OS=Homo sapiens GN=ANKRD11 PE=1 SV=3 0.917156 10.4418 1.3582E-10 188.58 136.7 188.58 1 S QQSNRKGETPLKVANSPTMVNLLLGKGTYTS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX VANS(0.917)PT(0.083)MVNLLLGK VANS(10.44)PT(-10.44)MVNLLLGK 4 3 0.010406 6543.3 0 0 34126 0 0 8391.8 0 0 34037 0 0 27387 0 0 6990.3 0 0 27997 0 0 24879 0 0 35903 0 0 14056 0 0 6198.6 0 0 32237 0 0 8577.5 0 0 34519 0 0 26687 0 0 8464.7 0 0 28686 0 0 24686 0 0 35090 0 0 13811 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 47394000 47394000 0 0 NaN 2278 1280 276 276 5047 5381 5733 6372 5733 6372 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23859 5733 6372 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23859 5733 6372 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23859 Q6UN15 259 Q6UN15 Q6UN15 Pre-mRNA 3'-end-processing factor FIP1 FIP1L1 sp|Q6UN15|FIP1_HUMAN Pre-mRNA 3'-end-processing factor FIP1 OS=Homo sapiens GN=FIP1L1 PE=1 SV=1 0.853412 7.65073 0.00679971 80.31 53.795 80.31 1 S SEKETALPSTKAEFTSPPSLFKTGLPPSRNS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX AEFT(0.147)S(0.853)PPSLFK AEFT(-7.65)S(7.65)PPS(-53.09)LFK 5 3 -0.24135 3056.1 0 0 4735.6 0 0 3398.9 0 0 4029.9 0 0 2958.4 0 0 3119.4 0 0 3156.1 0 0 4173 0 0 4676.6 0 0 4467 0 0 2893.2 0 0 4469.5 0 0 3397.8 0 0 4166.2 0 0 3032.5 0 0 3189 0 0 3244.8 0 0 4279.6 0 0 4550 0 0 4302.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17131000 17131000 0 0 NaN 2279 1281 259 259 138 144 155 174 155 174 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21975 155 174 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21975 155 174 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21975 Q6UN15 492 Q6UN15 Q6UN15 Pre-mRNA 3'-end-processing factor FIP1 FIP1L1 sp|Q6UN15|FIP1_HUMAN Pre-mRNA 3'-end-processing factor FIP1 OS=Homo sapiens GN=FIP1L1 PE=1 SV=1 0.999861 38.5678 6.26527E-16 223.89 191.71 164.58 1 S RERERTRERERERDHSPTPSVFNSDEERYRY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPXXX DHS(1)PTPSVFNSDEER DHS(38.57)PT(-38.57)PS(-78.35)VFNS(-133.81)DEER 3 3 -0.26559 43397 0 0 40973 0 0 43783 0 0 36388 0 0 42469 0 0 48567 0 0 39478 0 0 46239 0 0 40207 0 0 15988 0 0 41066 0 0 38680 0 0 44043 0 0 37838 0 0 43133 0 0 48138 0 0 40349 0 0 46953 0 0 39641 0 0 16125 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 340790000 340790000 0 0 NaN 2280 1281 492 492 696;1112 740;1171 790;1260 872;1386 790 872 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10727 1260 1386 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9209 1260 1386 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9209 Q6UUV7 370 Q6UUV7 Q6UUV7 CREB-regulated transcription coactivator 3 CRTC3 sp|Q6UUV7|CRTC3_HUMAN CREB-regulated transcription coactivator 3 OS=Homo sapiens GN=CRTC3 PE=1 SV=2 0.969302 15.1091 1.60867E-07 147.08 107.4 147.08 1 S PNASALHPSLRLFSLSNPSLSTTNLSGPSRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPX LFS(0.03)LS(0.969)NPS(0.001)LSTTNLSGPSR LFS(-15.11)LS(15.11)NPS(-30.8)LS(-65.19)T(-85.55)T(-93.7)NLS(-121.37)GPS(-132.93)R 5 3 0.0055417 3421.2 0 0 2703.8 0 0 4022 0 0 3440.8 0 0 2864.4 0 0 3618.3 0 0 3805.2 0 0 4298.4 0 0 3738.2 0 0 12820 0 0 3239.6 0 0 2558.4 0 0 4003 0 0 3490.8 0 0 2988.4 0 0 3651.5 0 0 3826.3 0 0 4671.6 0 0 3691.3 0 0 12171 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14906000 14906000 0 0 NaN 2281 1282 370 370 2354 2487 2676 2989 2676 2989 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22791 2676 2989 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22791 2676 2989 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22791 Q6UUV7 62 Q6UUV7 Q6UUV7 CREB-regulated transcription coactivator 3 CRTC3 sp|Q6UUV7|CRTC3_HUMAN CREB-regulated transcription coactivator 3 OS=Homo sapiens GN=CRTC3 PE=1 SV=2 0.999853 40.624 3.90444E-07 152.07 115.44 152.07 1 S FQKLQQLRLTQYHGGSLPNVSQLRSSASEFQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPXXXXXXX LTQYHGGS(1)LPNVSQLR LT(-42.23)QY(-74.85)HGGS(40.62)LPNVS(-40.62)QLR 8 3 1.4846 7514 0 0 5237.5 0 0 7329.2 0 0 5459 0 0 6315.7 0 0 8044.4 0 0 5550.5 0 0 6003.2 0 0 4546.2 0 0 6671 0 0 7109.5 0 0 4948.9 0 0 7376.8 0 0 5633.2 0 0 6457.3 0 0 7934.9 0 0 5659.2 0 0 6301.8 0 0 4528.4 0 0 6420.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16099000 16099000 0 0 NaN 2282 1282 62 62 2635 2782 2983 3320 2983 3320 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16971 2983 3320 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16971 2983 3320 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16971 Q6UUV7 410 Q6UUV7 Q6UUV7 CREB-regulated transcription coactivator 3 CRTC3 sp|Q6UUV7|CRTC3_HUMAN CREB-regulated transcription coactivator 3 OS=Homo sapiens GN=CRTC3 PE=1 SV=2 0.692368 4.99891 0.000641237 99.836 84.908 99.836 1 S LSPGPEAHQGFSRQLSSTSPLAPYPTSQMVS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP QLS(0.692)S(0.219)T(0.07)S(0.019)PLAPYPTSQMVSSDR QLS(5)S(-5)T(-9.94)S(-15.73)PLAPY(-65.04)PT(-81.06)S(-85.51)QMVS(-95.85)S(-95.67)DR 3 3 1.6536 4501.5 0 0 4802.8 0 0 5553.7 0 0 5155.4 0 0 4569.2 0 0 4944.5 0 0 5728.7 0 0 4560.4 0 0 4878.2 0 0 14906 0 0 4263.5 0 0 4539 0 0 5521.9 0 0 5268.5 0 0 4710.5 0 0 4988.8 0 0 5752.4 0 0 5038.4 0 0 4849.4 0 0 14141 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10674000 10674000 0 0 NaN 2283 1282 410 410 3081 3267 3495 3871 3495 3871 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17915 3495 3871 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17915 3495 3871 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17915 Q6UUV7 329 Q6UUV7 Q6UUV7 CREB-regulated transcription coactivator 3 CRTC3 sp|Q6UUV7|CRTC3_HUMAN CREB-regulated transcription coactivator 3 OS=Homo sapiens GN=CRTC3 PE=1 SV=2 0.898465 9.46886 1.29918E-05 136.1 103.36 136.1 1 S THLGIRSSSGLQSSRSNPSIQATLNKTVLSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPXXXXX S(0.898)NPS(0.102)IQATLNK S(9.47)NPS(-9.47)IQAT(-95.42)LNK 1 3 -0.011813 12212 0 0 10484 0 0 11483 0 0 12060 0 0 8259.1 0 0 12131 0 0 9666.3 0 0 9713.2 0 0 11086 0 0 3193.7 0 0 11553 0 0 9912.6 0 0 11568 0 0 12288 0 0 8592.9 0 0 12132 0 0 9810.8 0 0 9933 0 0 10879 0 0 3232 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 33317000 33317000 0 0 NaN 2284 1282 329 329 4047 4316 4605 5115 4605 5115 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14648 4605 5115 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14648 4605 5115 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14648 Q6UWZ7 406 Q6UWZ7 Q6UWZ7 BRCA1-A complex subunit Abraxas FAM175A sp|Q6UWZ7|F175A_HUMAN BRCA1-A complex subunit Abraxas OS=Homo sapiens GN=FAM175A PE=1 SV=2 0.962774 14.6987 0.0110156 78.744 59.132 78.744 1 S DEEIEKMKGFGEYSRSPTF____________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX GFGEYS(0.005)RS(0.963)PT(0.033)F GFGEY(-41.59)S(-23.28)RS(14.7)PT(-14.7)F 8 2 0.53852 25536 0 0 40160 0 0 23373 0 0 34409 0 0 22523 0 0 25130 0 0 29189 0 0 35283 0 0 38330 0 0 23109 0 0 24155 0 0 37905 0 0 23662 0 0 35532 0 0 23010 0 0 25774 0 0 29642 0 0 35695 0 0 37432 0 0 22577 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29230000 29230000 0 0 NaN 2285 1283 406 406 1417 1494 1603 1773 1603 1773 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17282 1603 1773 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17282 1603 1773 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17282 Q6W2J9 1127 Q6W2J9 Q6W2J9 BCL-6 corepressor BCOR sp|Q6W2J9|BCOR_HUMAN BCL-6 corepressor OS=Homo sapiens GN=BCOR PE=1 SV=1 0.747896 4.72419 0.00727026 95.108 83.257 95.108 1 S VSEPPADQVASDMPHSPTLRVDRKRKVSGDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX QPVSEPPADQVASDMPHS(0.748)PT(0.252)LR QPVS(-75.73)EPPADQVAS(-39.11)DMPHS(4.72)PT(-4.72)LR 18 3 1.5262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2286 1284 1127 1127 3109 3297 3527 3910 3527 3910 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15019 3527 3910 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15019 3527 3910 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15019 Q6WCQ1 372 Q6WCQ1 Q6WCQ1 Myosin phosphatase Rho-interacting protein MPRIP sp|Q6WCQ1|MPRIP_HUMAN Myosin phosphatase Rho-interacting protein OS=Homo sapiens GN=MPRIP PE=1 SV=3 1 54.6078 0.0415063 54.608 17.914 54.608 1 S PDASASPLSPHRRAKSLDRRSTEPSVTPDLL X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX AKS(1)LDRR AKS(54.61)LDRR 3 3 -0.41051 33018 0 0 31914 0 0 32757 0 0 32136 0 0 34531 0 0 33270 0 0 36084 0 0 32895 0 0 34688 0 0 5286 0 0 31242 0 0 30149 0 0 33024 0 0 33001 0 0 34958 0 0 33302 0 0 36618 0 0 33170 0 0 34286 0 0 5738.7 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 18043000 18043000 0 0 NaN 2287 1285 372 372 274 295 316 352;353 316 352 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6274 316 352 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6274 316 352 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6274 Q6WCQ1 360 Q6WCQ1 Q6WCQ1 Myosin phosphatase Rho-interacting protein MPRIP sp|Q6WCQ1|MPRIP_HUMAN Myosin phosphatase Rho-interacting protein OS=Homo sapiens GN=MPRIP PE=1 SV=3 0.425926 0 7.6027E-05 105.44 88.162 105.44 S RDFTNEAPPAPLPDASASPLSPHRRAKSLDR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XPPPPPPPPPPPPPPPPPPPPPPPPXXXXXX DFTNEAPPAPLPDAS(0.426)AS(0.148)PLS(0.426)PHRR DFT(-95.05)NEAPPAPLPDAS(0)AS(-4.59)PLS(0)PHRR 15 4 -0.024868 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2288 1285 360 360 670 714 761 841 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15849 761 841 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15849 761 841 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15849 Q6WCQ1 365 Q6WCQ1 Q6WCQ1 Myosin phosphatase Rho-interacting protein MPRIP sp|Q6WCQ1|MPRIP_HUMAN Myosin phosphatase Rho-interacting protein OS=Homo sapiens GN=MPRIP PE=1 SV=3 0.425926 0 7.6027E-05 105.44 88.162 105.44 S EAPPAPLPDASASPLSPHRRAKSLDRRSTEP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DFTNEAPPAPLPDAS(0.426)AS(0.148)PLS(0.426)PHRR DFT(-95.05)NEAPPAPLPDAS(0)AS(-4.59)PLS(0)PHRR 20 4 -0.024868 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2289 1285 365 365 670 714 761 841 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15849 761 841 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15849 761 841 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15849 Q6WKZ4 434 Q6WKZ4 Q6WKZ4 Rab11 family-interacting protein 1 RAB11FIP1 sp|Q6WKZ4|RFIP1_HUMAN Rab11 family-interacting protein 1 OS=Homo sapiens GN=RAB11FIP1 PE=1 SV=3 0.5 0 4.48548E-10 176.25 140.29 176.25 1 S ATKEAKESKKPESRRSSLLSLMTGKKDVAKG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPXXXXXX RS(0.5)S(0.5)LLSLMTGK RS(0)S(0)LLS(-68.79)LMT(-153.34)GK 2 3 -0.80109 12347 0 0 5938.9 0 0 12693 0 0 5878.2 0 0 7332.7 0 0 11785 0 0 7951 0 0 9685.2 0 0 6900.6 0 0 3793.5 0 0 11685 0 0 5609.9 0 0 12697 0 0 6134.2 0 0 7765.5 0 0 11530 0 0 8035 0 0 9910.7 0 0 6853.3 0 0 3796.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 94681000 94681000 0 0 NaN 2290 1286 434 434 3499 3716 3962 4400 3962 4400 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20929 3962 4400 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20929 3962 4400 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20929 Q6WKZ4 435 Q6WKZ4 Q6WKZ4 Rab11 family-interacting protein 1 RAB11FIP1 sp|Q6WKZ4|RFIP1_HUMAN Rab11 family-interacting protein 1 OS=Homo sapiens GN=RAB11FIP1 PE=1 SV=3 0.5 0 4.48548E-10 176.25 140.29 176.25 1 S TKEAKESKKPESRRSSLLSLMTGKKDVAKGS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RS(0.5)S(0.5)LLSLMTGK RS(0)S(0)LLS(-68.79)LMT(-153.34)GK 3 3 -0.80109 12347 0 0 5938.9 0 0 12693 0 0 5878.2 0 0 7332.7 0 0 11785 0 0 7951 0 0 9685.2 0 0 6900.6 0 0 3793.5 0 0 11685 0 0 5609.9 0 0 12697 0 0 6134.2 0 0 7765.5 0 0 11530 0 0 8035 0 0 9910.7 0 0 6853.3 0 0 3796.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 94681000 94681000 0 0 NaN 2291 1286 435 435 3499 3716 3962 4400 3962 4400 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20929 3962 4400 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20929 3962 4400 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20929 Q6XZF7 1379 Q6XZF7 Q6XZF7 Dynamin-binding protein DNMBP sp|Q6XZF7|DNMBP_HUMAN Dynamin-binding protein OS=Homo sapiens GN=DNMBP PE=1 SV=1 0.850991 7.70713 1.55049E-08 171.89 154.81 171.89 1 S ESEHGSSSPRFPRQNSGSTLTFNPSSMAVSF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP QNS(0.851)GS(0.144)T(0.005)LTFNPSSMAVSFTSGSCQK QNS(7.71)GS(-7.71)T(-22.56)LT(-50.48)FNPS(-101.5)S(-106.11)MAVS(-130.96)FT(-146.87)S(-153.95)GS(-160.04)CQK 3 3 -0.14967 5413.5 0 0 5425.9 0 0 5640 0 0 6737.8 0 0 5275.4 0 0 6851.6 0 0 7163.2 0 0 7069.7 0 0 6063.1 0 0 63361 0 0 5123.4 0 0 5133.2 0 0 5665.3 0 0 6839.9 0 0 5400.7 0 0 6984.7 0 0 7170.8 0 0 8992.2 0 0 6029.1 0 0 59825 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 16589000 16589000 0 0 NaN 2292 1287 1379 1379 3091 3279 3508 3888;3889 3508 3888 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22567 3508 3888 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22567 3508 3888 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22567 Q6XZF7 659 Q6XZF7 Q6XZF7 Dynamin-binding protein DNMBP sp|Q6XZF7|DNMBP_HUMAN Dynamin-binding protein OS=Homo sapiens GN=DNMBP PE=1 SV=1 0.999921 41.0436 0.00893271 90.104 53.77 90.104 1 S PAPLPPSAQQRTNAVSPKLLSRHRPTCETLE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX TNAVS(1)PK T(-41.04)NAVS(41.04)PK 5 2 0.609 30203 0 0 27911 0 0 30368 0 0 26452 0 0 22920 0 0 31062 0 0 21206 0 0 26475 0 0 28747 0 0 5103.8 0 0 28581 0 0 26358 0 0 30475 0 0 27323 0 0 23682 0 0 30881 0 0 21875 0 0 26888 0 0 28045 0 0 5418.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26038000 26038000 0 0 NaN 2293 1287 659 659 4801 5121 5460 6076 5460 6076 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8283 5460 6076 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8283 5460 6076 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8283 Q6Y7W6 1284 Q6Y7W6 Q6Y7W6 PERQ amino acid-rich with GYF domain-containing protein 2 GIGYF2 sp|Q6Y7W6|PERQ2_HUMAN PERQ amino acid-rich with GYF domain-containing protein 2 OS=Homo sapiens GN=GIGYF2 PE=1 SV=1 0.874432 8.42925 4.13556E-07 150.65 135.68 150.65 1 S MVRADPSLLGFSVNASSERLNMGEIETLDDY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPXXXXXXXXXXXX ADPSLLGFSVNAS(0.874)S(0.126)ER ADPS(-132.87)LLGFS(-45.82)VNAS(8.43)S(-8.43)ER 13 3 -0.48066 4211.2 0 0 4120 0 0 3922.6 0 0 3684.3 0 0 4820.5 0 0 4901.4 0 0 5396 0 0 4054.8 0 0 3806.7 0 0 10149 0 0 3983.8 0 0 3889.6 0 0 3978.5 0 0 3829.1 0 0 4845.5 0 0 4867.1 0 0 5421.5 0 0 4405.9 0 0 3823.5 0 0 9650.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12314000 12314000 0 0 NaN 2294 1288 1284 1284 113 121 130 144 130 144 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20558 130 144 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20558 130 144 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20558 Q6Y7W6 19 Q6Y7W6 Q6Y7W6 PERQ amino acid-rich with GYF domain-containing protein 2 GIGYF2 sp|Q6Y7W6|PERQ2_HUMAN PERQ amino acid-rich with GYF domain-containing protein 2 OS=Homo sapiens GN=GIGYF2 PE=1 SV=1 0.621078 5.20098 0.00254353 94.671 66.701 94.671 1 S ETQTLNFGPEWLRALSSGGSITSPPLSPALP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP ALS(0.621)S(0.188)GGS(0.071)IT(0.111)S(0.009)PPLSPALPK ALS(5.2)S(-5.2)GGS(-9.45)IT(-7.46)S(-18.18)PPLS(-65.22)PALPK 3 3 0.24308 5468.7 0 0 5104.6 0 0 5149.8 0 0 5055.7 0 0 6147.9 0 0 5244.9 0 0 6148.3 0 0 5231.9 0 0 5279.4 0 0 12703 0 0 5173.6 0 0 4821.8 0 0 5216.1 0 0 5197.1 0 0 6179.2 0 0 5272.6 0 0 6234.6 0 0 5631.2 0 0 5246 0 0 12083 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7962000 7962000 0 0 NaN 2295 1288 19 19 322 343 368 408 368 408 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20336 368 408 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20336 368 408 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20336 Q6Y7W6 26 Q6Y7W6 Q6Y7W6 PERQ amino acid-rich with GYF domain-containing protein 2 GIGYF2 sp|Q6Y7W6|PERQ2_HUMAN PERQ amino acid-rich with GYF domain-containing protein 2 OS=Homo sapiens GN=GIGYF2 PE=1 SV=1 0.974297 15.8043 4.70946E-11 184.62 143.76 184.62 1 S GPEWLRALSSGGSITSPPLSPALPKYKLADY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPXXXXXX ALSSGGSIT(0.026)S(0.974)PPLSPALPK ALS(-61.02)S(-53.73)GGS(-40.04)IT(-15.8)S(15.8)PPLS(-82.18)PALPK 10 4 0.29954 4847.7 0 0 4257.3 0 0 5876.2 0 0 4067 0 0 3288.3 0 0 5137.6 0 0 3029.3 0 0 4646.4 0 0 5561.2 0 0 2134.7 0 0 4591 0 0 4020.6 0 0 5825.7 0 0 4204.7 0 0 3488.5 0 0 5099.8 0 0 3165.3 0 0 4744 0 0 5379.9 0 0 2117.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 50482000 50482000 0 0 NaN 2296 1288 26 26 322 343 367 407 367 407 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20006 367 407 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20006 367 407 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20006 Q6Y7W6 30 Q6Y7W6 Q6Y7W6 PERQ amino acid-rich with GYF domain-containing protein 2 GIGYF2 sp|Q6Y7W6|PERQ2_HUMAN PERQ amino acid-rich with GYF domain-containing protein 2 OS=Homo sapiens GN=GIGYF2 PE=1 SV=1 0.995295 23.581 0.00579755 85.884 65.233 85.884 1 S LRALSSGGSITSPPLSPALPKYKLADYRYGR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPXXXXXXXXXX ALSSGGSITS(0.004)PPLS(0.995)PALPK ALS(-56.31)S(-51.63)GGS(-47.21)IT(-35.03)S(-23.58)PPLS(23.58)PALPK 14 3 0.076709 4239.2 0 0 4251.7 0 0 6227.9 0 0 4897.5 0 0 5159.5 0 0 6173.8 0 0 6769.9 0 0 5543.3 0 0 5015.2 0 0 14298 0 0 4018.8 0 0 4020.1 0 0 6146.7 0 0 5009.7 0 0 5320.1 0 0 6150.4 0 0 6765.8 0 0 6015.5 0 0 5022.9 0 0 13592 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6361300 6361300 0 0 NaN 2297 1288 30 30 322 343 366 406 366 406 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19505 366 406 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19505 366 406 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19505 Q6Y7W6 201 Q6Y7W6 Q6Y7W6 PERQ amino acid-rich with GYF domain-containing protein 2 GIGYF2 sp|Q6Y7W6|PERQ2_HUMAN PERQ amino acid-rich with GYF domain-containing protein 2 OS=Homo sapiens GN=GIGYF2 PE=1 SV=1 0.998878 29.4948 0.000919715 124.81 84.957 124.81 1 S GPTSVGRKHEFIRSESENWRIFREEQNGEDE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX S(0.001)ES(0.999)ENWR S(-29.49)ES(29.49)ENWR 3 2 -0.62651 46004 0 0 23891 0 0 44119 0 0 24551 0 0 52804 0 0 48525 0 0 56326 0 0 44423 0 0 23357 0 0 4711.4 0 0 43525 0 0 22573 0 0 44647 0 0 25553 0 0 53092 0 0 47526 0 0 56263 0 0 44861 0 0 24445 0 0 5464.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 46898000 46898000 0 0 NaN 2298 1288 201 201 3700 3935 4195 4661 4195 4661 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8760 4195 4661 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8760 4195 4661 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8760 Q6Y7W6 139 Q6Y7W6 Q6Y7W6 PERQ amino acid-rich with GYF domain-containing protein 2 GIGYF2 sp|Q6Y7W6|PERQ2_HUMAN PERQ amino acid-rich with GYF domain-containing protein 2 OS=Homo sapiens GN=GIGYF2 PE=1 SV=1 1 189.242 4.20704E-10 189.24 132.88 189.24 1 S RGRGRGRGECGFYQRSFDEVEGVFGRGGGRE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPXXXXX S(1)FDEVEGVFGR S(189.24)FDEVEGVFGR 1 2 -0.21342 7002 0 0 11007 0 0 7305.6 0 0 11086 0 0 16027 0 0 6953.9 0 0 16240 0 0 12559 0 0 9737.6 0 0 27345 0 0 6626.8 0 0 10398 0 0 7446.1 0 0 11312 0 0 15746 0 0 7276.4 0 0 16343 0 0 13204 0 0 9883.9 0 0 26039 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7716500 7716500 0 0 NaN 2299 1288 139 139 3731 3972 4236 4709 4236 4709 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20679 4236 4709 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20679 4236 4709 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20679 Q6Y7W6 160 Q6Y7W6 Q6Y7W6 PERQ amino acid-rich with GYF domain-containing protein 2 GIGYF2 sp|Q6Y7W6|PERQ2_HUMAN PERQ amino acid-rich with GYF domain-containing protein 2 OS=Homo sapiens GN=GIGYF2 PE=1 SV=1 0.999997 54.7269 2.38447E-06 151.55 107.36 151.55 1 S GVFGRGGGREMHRSQSWEERGDRRFEKPGRK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX SQS(1)WEERGDR S(-54.73)QS(54.73)WEERGDR 3 2 0.356 60765 0 0 46982 0 0 59613 0 0 44557 0 0 63606 0 0 57159 0 0 59173 0 0 54246 0 0 47594 0 0 8380.2 0 0 57495 0 0 44369 0 0 60133 0 0 46100 0 0 64238 0 0 56711 0 0 60129 0 0 54779 0 0 47452 0 0 9146.4 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 203990000 203990000 0 0 NaN 2300 1288 160 160 4253;4254 4532;4533 4831;4832 5362;5363 4832 5363 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7255 4832 5363 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7255 4832 5363 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7255 Q6Y7W6 236 Q6Y7W6 Q6Y7W6 PERQ amino acid-rich with GYF domain-containing protein 2 GIGYF2 sp|Q6Y7W6|PERQ2_HUMAN PERQ amino acid-rich with GYF domain-containing protein 2 OS=Homo sapiens GN=GIGYF2 PE=1 SV=1 1 148.081 1.78206E-06 148.08 63.328 148.08 1 S RLAGSRRDGERWRPHSPDGPRSAGWREHMER X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX WRPHS(1)PDGPR WRPHS(148.08)PDGPR 5 3 -0.08378 45934 0 0 44304 0 0 49008 0 0 42333 0 0 41702 0 0 52752 0 0 41557 0 0 42093 0 0 44173 0 0 7376.6 0 0 43477 0 0 41841 0 0 49082 0 0 43754 0 0 42751 0 0 52291 0 0 42380 0 0 42858 0 0 43474 0 0 7920.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 178980000 178980000 0 0 NaN 2301 1288 236 236 5348 5697 6075 6752 6075 6752 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7672 6075 6752 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7672 6075 6752 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7672 Q6ZN17 203 Q6ZN17 Q6ZN17 Protein lin-28 homolog B LIN28B sp|Q6ZN17|LN28B_HUMAN Protein lin-28 homolog B OS=Homo sapiens GN=LIN28B PE=1 SV=1 0.712602 3.94364 1.60719E-05 130.17 111.34 130.17 1 S TSTLPREVGGGHGCTSPPFPQEARAEISERS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPXXXXXXX EVGGGHGCT(0.287)S(0.713)PPFPQEAR EVGGGHGCT(-3.94)S(3.94)PPFPQEAR 10 3 0.13048 14045 0 0 17494 0 0 13576 0 0 19580 0 0 17959 0 0 11905 0 0 15439 0 0 16644 0 0 19604 0 0 8364.6 0 0 13288 0 0 16538 0 0 13746 0 0 19854 0 0 17934 0 0 12350 0 0 15951 0 0 16763 0 0 19167 0 0 8261.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 39025000 39025000 0 0 NaN 2302 1290 203 203 1213 1276 1375 1526 1375 1526 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11301 1375 1526 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11301 1375 1526 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11301 Q6ZN17 221 Q6ZN17 Q6ZN17 Protein lin-28 homolog B LIN28B sp|Q6ZN17|LN28B_HUMAN Protein lin-28 homolog B OS=Homo sapiens GN=LIN28B PE=1 SV=1 0.991138 20.4862 3.03487E-07 147.53 109.98 147.53 1 S FPQEARAEISERSGRSPQEASSTKSSIAPEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX S(0.009)GRS(0.991)PQEASSTK S(-20.49)GRS(20.49)PQEAS(-71.38)S(-89.07)T(-94.14)K 4 3 0.71 2038.6 0 0 25755 0 0 2306.1 0 0 22457 0 0 13870 0 0 2216.5 0 0 14913 0 0 15112 0 0 24782 0 0 2075.4 0 0 1930 0 0 24311 0 0 2450.3 0 0 22934 0 0 13417 0 0 3290.7 0 0 15400 0 0 14721 0 0 24034 0 0 2304 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 60019000 60019000 0 0 NaN 2303 1290 221 221 3798 4046 4315 4794 4315 4794 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5675 4315 4794 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5675 4315 4794 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5675 Q6ZN18 371 Q6ZN18 Q6ZN18 Zinc finger protein AEBP2 AEBP2 sp|Q6ZN18|AEBP2_HUMAN Zinc finger protein AEBP2 OS=Homo sapiens GN=AEBP2 PE=1 SV=2 0.960954 13.9112 0.0210037 57.583 22.169 57.583 1 S QNSSKVSSQPKAKEESPSKAGMNKRRKLKNK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX AKEES(0.961)PS(0.039)K AKEES(13.91)PS(-13.91)K 5 3 3.3478 41709 0 0 16113 0 0 41291 0 0 17057 0 0 17971 0 0 40894 0 0 17968 0 0 24824 0 0 19199 0 0 3617.5 0 0 39466 0 0 15227 0 0 41316 0 0 17839 0 0 19615 0 0 39732 0 0 18324 0 0 25632 0 0 18891 0 0 3980.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26832000 26832000 0 0 NaN 2304 1291 371 371 264 285 306 340 306 340 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7111 306 340 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7111 306 340 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7111 Q6ZN18 24 Q6ZN18 Q6ZN18 Zinc finger protein AEBP2 AEBP2 sp|Q6ZN18|AEBP2_HUMAN Zinc finger protein AEBP2 OS=Homo sapiens GN=AEBP2 PE=1 SV=2 0.91079 10.1506 0.0318641 60.345 25.537 60.345 1 S ADLEELSRLSPLPPGSPGSAARGRAEPPEEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPXXXXXXXXX LS(0.001)PLPPGS(0.911)PGS(0.088)AAR LS(-28.68)PLPPGS(10.15)PGS(-10.15)AAR 8 2 0.22272 9393.2 0 0 7733.3 0 0 11051 0 0 7315.2 0 0 10842 0 0 10229 0 0 10055 0 0 11147 0 0 8135.2 0 0 13024 0 0 8894.5 0 0 7303 0 0 11028 0 0 7583.3 0 0 11002 0 0 10159 0 0 10221 0 0 11538 0 0 8108.4 0 0 12522 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7933500 7933500 0 0 NaN 2305 1291 24 24 2575 2719 2917 3251 2917 3251 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14951 2917 3251 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14951 2917 3251 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14951 Q6ZN55 164 Q6ZN55 Q6ZN55 Zinc finger protein 574 ZNF574 sp|Q6ZN55|ZN574_HUMAN Zinc finger protein 574 OS=Homo sapiens GN=ZNF574 PE=1 SV=2 1 124.311 2.67891E-05 124.31 107.03 124.31 1 S LRATPTKAPAPVVLGSPVVLGPPVGQARVAV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPPPXXX APAPVVLGS(1)PVVLGPPVGQAR APAPVVLGS(124.31)PVVLGPPVGQAR 9 3 0.86714 4390 0 0 5154.7 0 0 4557.1 0 0 4086.4 0 0 3807.3 0 0 3898.8 0 0 4348.2 0 0 5386.5 0 0 3954.5 0 0 16890 0 0 4154.7 0 0 4863.4 0 0 4571 0 0 4258 0 0 3915.2 0 0 3966.8 0 0 4389.4 0 0 5854.3 0 0 3918.6 0 0 16028 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23961000 23961000 0 0 NaN 2306 1292 164 164 350 376 408 450 408 450 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21524 408 450 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21524 408 450 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21524 Q6ZNJ1 2739 Q6ZNJ1 Q6ZNJ1 Neurobeachin-like protein 2 NBEAL2 sp|Q6ZNJ1|NBEL2_HUMAN Neurobeachin-like protein 2 OS=Homo sapiens GN=NBEAL2 PE=1 SV=2 0.999998 57.6319 6.90123E-23 271.81 250.01 271.81 1;2 S SSQFARKLWRSSRRISQVSSGETEYNPTEAR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RIS(1)QVSSGETEYNPTEAR RIS(57.63)QVS(-57.63)S(-79.31)GET(-119.42)EY(-190.96)NPT(-200.35)EAR 3 3 -2.0162 18842 0 0 23468 0 0 16906 0 0 20800 0 0 22218 0 0 17277 0 0 23854 0 0 18903 0 0 19713 0 0 10435 0 0 17822 0 0 22155 0 0 17203 0 0 21463 0 0 22252 0 0 17515 0 0 24089 0 0 19213 0 0 19626 0 0 10263 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 76171000 76171000 0 0 NaN 2307 1293 2739 2739 3284 3484;3485 3721;3722 4134;4135 3721 4134 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11972 3721 4134 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11972 3721 4134 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11972 Q6ZNJ1 2742 Q6ZNJ1 Q6ZNJ1 Neurobeachin-like protein 2 NBEAL2 sp|Q6ZNJ1|NBEL2_HUMAN Neurobeachin-like protein 2 OS=Homo sapiens GN=NBEAL2 PE=1 SV=2 0.48014 1.06697 1.05213E-08 147.45 127.01 147.45 S FARKLWRSSRRISQVSSGETEYNPTEAR___ X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPXXX RIS(1)QVS(0.48)S(0.376)GET(0.144)EYNPTEAR RIS(53.19)QVS(1.07)S(-1.07)GET(-5.22)EY(-45.71)NPT(-72.93)EAR 6 3 1.2416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2308 1293 2742 2742 3284 3484;3485 3722 4135 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12219 3722 4135 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12219 3722 4135 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12219 Q6ZNJ1 759 Q6ZNJ1 Q6ZNJ1 Neurobeachin-like protein 2 NBEAL2 sp|Q6ZNJ1|NBEL2_HUMAN Neurobeachin-like protein 2 OS=Homo sapiens GN=NBEAL2 PE=1 SV=2 0.603279 1.91374 1.70752E-08 149.06 142.41 149.06 1 S PATLAYTHPALTRSQSVPASTGLGWGSGLVA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.388)QS(0.603)VPAS(0.008)TGLGWGSGLVAPLQEGSIDSTLAGTQDTR S(-1.91)QS(1.91)VPAS(-18.69)T(-33.23)GLGWGS(-72.66)GLVAPLQEGS(-125.68)IDS(-137.25)T(-137.09)LAGT(-145.21)QDT(-147.77)R 3 3 -0.28043 5408.6 0 0 3127.9 0 0 4981 0 0 6497.8 0 0 8670.7 0 0 5890.5 0 0 5308.4 0 0 9012 0 0 7003.5 0 0 105730 0 0 5116.3 0 0 2974 0 0 5079 0 0 6456.3 0 0 8535.2 0 0 6169.7 0 0 5611.4 0 0 12105 0 0 6838.4 0 0 99770 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 78427000 78427000 0 0 NaN 2309 1293 759 759 4251 4530 4829 5360 4829 5360 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23509 4829 5360 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23509 4829 5360 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23509 Q6ZRI6 586 Q6ZRI6 Q6ZRI6 Uncharacterized protein C15orf39 C15orf39 sp|Q6ZRI6|CO039_HUMAN Uncharacterized protein C15orf39 OS=Homo sapiens GN=C15orf39 PE=1 SV=3 0.999888 39.4953 0.000236854 110.38 78.321 110.38 1 S EVALDLSVRKPTAEASPVKASRSVEHAKPTA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX KPTAEAS(1)PVK KPT(-39.5)AEAS(39.5)PVK 7 3 0.035183 20201 0 0 19059 0 0 19886 0 0 17234 0 0 19061 0 0 18998 0 0 19450 0 0 19063 0 0 17765 0 0 3634.7 0 0 19114 0 0 17994 0 0 20033 0 0 17835 0 0 19396 0 0 18971 0 0 19734 0 0 19228 0 0 17601 0 0 3863.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22522000 22522000 0 0 NaN 2310 1294 586 586 2174 2297 2472 2752 2472 2752 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9607 2472 2752 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9607 2472 2752 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9607 Q6ZRS2 3148 Q6ZRS2 Q6ZRS2 Helicase SRCAP SRCAP sp|Q6ZRS2|SRCAP_HUMAN Helicase SRCAP OS=Homo sapiens GN=SRCAP PE=1 SV=3 1 85.493 0.00560268 85.493 61.559 85.493 1 S TEKLPRKRAGAPVGGSPGLAKRGRLQPPSPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPXXXXXXXXXX AGAPVGGS(1)PGLAK AGAPVGGS(85.49)PGLAK 8 3 0.15985 15527 0 0 11363 0 0 17842 0 0 13018 0 0 9497.4 0 0 17760 0 0 10991 0 0 14028 0 0 13490 0 0 2019.3 0 0 14701 0 0 10743 0 0 17733 0 0 13341 0 0 10154 0 0 17547 0 0 11184 0 0 14276 0 0 13205 0 0 2226.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16486000 16486000 0 0 NaN 2311 1295 3148 3148 187 195 210 235 210 235 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12769 210 235 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12769 210 235 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12769 Q6ZRS2 2787 Q6ZRS2 Q6ZRS2 Helicase SRCAP SRCAP sp|Q6ZRS2|SRCAP_HUMAN Helicase SRCAP OS=Homo sapiens GN=SRCAP PE=1 SV=3 0.618416 4.228 1.57104E-08 168.35 144.16 168.35 1 S GAASTLVPGVSETSASPGSPSVRSMSGPESS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPXXXXXXXX GAASTLVPGVSETS(0.002)AS(0.618)PGS(0.145)PS(0.234)VR GAAS(-137.2)T(-133.39)LVPGVS(-75.18)ET(-36.02)S(-24.17)AS(4.23)PGS(-6.29)PS(-4.23)VR 16 3 0.23111 7926.1 0 0 7170.6 0 0 7228.7 0 0 7641.6 0 0 7658.7 0 0 7386 0 0 6294.4 0 0 6484.4 0 0 8091.2 0 0 9849.4 0 0 7497.5 0 0 6776.5 0 0 7321.7 0 0 7813.3 0 0 7729.1 0 0 7422 0 0 6521.9 0 0 6836 0 0 7907.4 0 0 9424.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26843000 26843000 0 0 NaN 2312 1295 2787 2787 1352 1426 1534 1697 1534 1697 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15790 1534 1697 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15790 1534 1697 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15790 Q6ZRS2 3016 Q6ZRS2 Q6ZRS2 Helicase SRCAP SRCAP sp|Q6ZRS2|SRCAP_HUMAN Helicase SRCAP OS=Homo sapiens GN=SRCAP PE=1 SV=3 0.994019 22.2063 0.00239125 95.122 58.526 95.122 1 S SPPKRKRGRPPKNPPSPRPSQLPVLDRDSTS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPXXXX NPPS(0.994)PRPS(0.006)QLPVLDR NPPS(22.21)PRPS(-22.21)QLPVLDR 4 3 0.46224 21390 0 0 22328 0 0 20604 0 0 23273 0 0 24271 0 0 21560 0 0 21604 0 0 24342 0 0 22523 0 0 6490.2 0 0 20237 0 0 21098 0 0 20832 0 0 23811 0 0 24377 0 0 21735 0 0 22145 0 0 24504 0 0 22185 0 0 6674.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 75767000 75767000 0 0 NaN 2313 1295 3016 3016 2887 3060 3277 3633 3277 3633 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14537 3277 3633 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14537 3277 3633 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14537 Q6ZRS2 1859 Q6ZRS2 Q6ZRS2 Helicase SRCAP SRCAP sp|Q6ZRS2|SRCAP_HUMAN Helicase SRCAP OS=Homo sapiens GN=SRCAP PE=1 SV=3 0.999601 34.8739 6.12523E-08 164.89 146.59 164.89 1 S SKDEPDTLTLRSGPPSPPSTATSFGGPRPRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPX SGPPS(1)PPSTATSFGGPRPR S(-34.87)GPPS(34.87)PPS(-41.31)T(-69.18)AT(-109.15)S(-127.51)FGGPRPR 5 3 -0.24851 11311 0 0 11559 0 0 11579 0 0 13532 0 0 13294 0 0 12579 0 0 12975 0 0 13037 0 0 12760 0 0 6755.2 0 0 10705 0 0 10931 0 0 11665 0 0 13759 0 0 13385 0 0 12669 0 0 13217 0 0 13263 0 0 12600 0 0 6662.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 31729000 31729000 0 0 NaN 2314 1295 1859 1859 3796 4044 4313 4792 4313 4792 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11633 4313 4792 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11633 4313 4792 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11633 Q6ZRV2 892 Q6ZRV2 Q6ZRV2 Protein FAM83H FAM83H sp|Q6ZRV2|FA83H_HUMAN Protein FAM83H OS=Homo sapiens GN=FAM83H PE=1 SV=3 0.987907 19.125 7.23369E-08 170.23 122.52 170.23 1 S ERKGSPTPGFSTRRGSPTTGFIEQKGSPTSA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX RGS(0.988)PT(0.012)TGFIEQK RGS(19.12)PT(-19.12)T(-50.77)GFIEQK 3 3 1.0817 10729 0 0 21518 0 0 10198 0 0 22578 0 0 11654 0 0 10381 0 0 10774 0 0 15997 0 0 24086 0 0 5618.9 0 0 10150 0 0 20333 0 0 10315 0 0 22922 0 0 11741 0 0 11031 0 0 11374 0 0 15997 0 0 23201 0 0 5661.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18967000 18967000 0 0 NaN 2315 1296 892 892 3257 3455 3691 4095 3691 4095 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12796 3691 4095 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12796 3691 4095 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12796 Q6ZS17 351 Q6ZS17 Q6ZS17 Protein FAM65A FAM65A sp|Q6ZS17|FA65A_HUMAN Protein FAM65A OS=Homo sapiens GN=FAM65A PE=1 SV=1 0.999778 36.6309 1.24191E-22 265.43 189.1 265.43 1 S NKASTVTKRFSTYSQSPPDTPSLREQAFYNM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPXXXXXXX FSTYSQS(1)PPDTPSLR FS(-69.02)T(-53)Y(-120.73)S(-36.63)QS(36.63)PPDT(-75.76)PS(-93.99)LR 7 2 1.3823 6364.6 0 0 10332 0 0 6273.4 0 0 9208.1 0 0 11337 0 0 6766.9 0 0 13314 0 0 10671 0 0 9870.5 0 0 20657 0 0 6022.2 0 0 9754.3 0 0 6387.9 0 0 9484 0 0 11230 0 0 6979.6 0 0 13363 0 0 11175 0 0 9885.2 0 0 19698 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14259000 14259000 0 0 NaN 2316 1297 351 351 1330 1403 1510 1672 1510 1672 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16215 1510 1672 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16215 1510 1672 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16215 Q6ZSR9 93 Q6ZSR9 Q6ZSR9 Uncharacterized protein FLJ45252 sp|Q6ZSR9|YJ005_HUMAN Uncharacterized protein FLJ45252 OS=Homo sapiens PE=2 SV=2 1 132.599 1.15636E-05 132.6 120.62 132.6 1 S PGKLGGAVPFAPPEVSPEQAKTVQGGRKNQF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPXXXXXXXXXX LGGAVPFAPPEVS(1)PEQAK LGGAVPFAPPEVS(132.6)PEQAK 13 3 0.72319 9374 0 0 5462.6 0 0 10092 0 0 4695.1 0 0 4336.8 0 0 8749.8 0 0 5024.8 0 0 6378.9 0 0 4795.4 0 0 16266 0 0 8872.9 0 0 5156 0 0 10051 0 0 4932.8 0 0 4750.3 0 0 8590.3 0 0 5075.5 0 0 6980.4 0 0 4741.4 0 0 15464 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 31624000 31624000 0 0 NaN 2317 1298 93 93 2365 2498 2687 3000 2687 3000 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21350 2687 3000 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21350 2687 3000 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21350 Q6ZSZ5 733 Q6ZSZ5 Q6ZSZ5 Rho guanine nucleotide exchange factor 18 ARHGEF18 sp|Q6ZSZ5|ARHGI_HUMAN Rho guanine nucleotide exchange factor 18 OS=Homo sapiens GN=ARHGEF18 PE=1 SV=3 0.926928 13.2543 8.36188E-05 118.32 102.55 118.32 1 S PPRRAETFAGYDCTNSPTKNGSFKKKVSSTD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPXXXXXXXXXXXX RAETFAGYDCT(0.044)NS(0.927)PT(0.029)K RAET(-66.13)FAGY(-58.81)DCT(-13.25)NS(13.25)PT(-15.01)K 13 3 0.53691 28195 0 0 15975 0 0 30936 0 0 16670 0 0 20003 0 0 31333 0 0 17759 0 0 24539 0 0 18693 0 0 130410 0 0 26689 0 0 15095 0 0 30855 0 0 17309 0 0 20914 0 0 30912 0 0 18211 0 0 28807 0 0 18404 0 0 123360 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24345000 24345000 0 0 NaN 2318 1299 733 733 3181 3374 3606 3996 3606 3996 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11935 3606 3996 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11935 3606 3996 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11935 Q6ZSZ5 1101 Q6ZSZ5 Q6ZSZ5 Rho guanine nucleotide exchange factor 18 ARHGEF18 sp|Q6ZSZ5|ARHGI_HUMAN Rho guanine nucleotide exchange factor 18 OS=Homo sapiens GN=ARHGEF18 PE=1 SV=3 0.96142 13.9655 0.00628073 90.108 51.086 90.108 1 S NKLMGKDESTSRNRRSLSPILPGRHSPAPPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(0.961)LS(0.039)PILPGR S(13.97)LS(-13.97)PILPGR 1 2 0.0039649 16729 0 0 7296.9 0 0 13927 0 0 6752.1 0 0 9326.9 0 0 13402 0 0 8409.9 0 0 11433 0 0 7091.5 0 0 5134.4 0 0 15820 0 0 6890 0 0 14127 0 0 7073 0 0 9722.4 0 0 13122 0 0 8568.5 0 0 11700 0 0 7053.1 0 0 5099.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 87513000 87513000 0 0 NaN 2319 1299 1101 1101 3472;3994 3688;4259 4546 5054 4546 5054 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17748 4546 5054 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17748 4546 5054 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17748 Q6ZSZ5 1103 Q6ZSZ5 Q6ZSZ5 Rho guanine nucleotide exchange factor 18 ARHGEF18 sp|Q6ZSZ5|ARHGI_HUMAN Rho guanine nucleotide exchange factor 18 OS=Homo sapiens GN=ARHGEF18 PE=1 SV=3 0.940212 11.9661 0.00820533 78.985 51.243 78.985 1 S LMGKDESTSRNRRSLSPILPGRHSPAPPPDP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX RS(0.06)LS(0.94)PILPGR RS(-11.97)LS(11.97)PILPGR 4 3 -0.23818 5599 0 0 2985.6 0 0 4829.4 0 0 2913.4 0 0 3699.6 0 0 5328.4 0 0 2801.3 0 0 3431.1 0 0 2942.6 0 0 471.41 0 0 5295.2 0 0 2820 0 0 4891.7 0 0 3034.6 0 0 3808.5 0 0 5210.2 0 0 2898.5 0 0 3529.4 0 0 2897.5 0 0 523.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5580100 5580100 0 0 NaN 2320 1299 1103 1103 3472;3994 3688;4259 3934 4369 3934 4369 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14310 3934 4369 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14310 3934 4369 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14310 Q6ZTN6 465 Q6ZTN6 Q6ZTN6 Ankyrin repeat domain-containing protein 13D ANKRD13D sp|Q6ZTN6|AN13D_HUMAN Ankyrin repeat domain-containing protein 13D OS=Homo sapiens GN=ANKRD13D PE=1 SV=2 1 67.0033 0.000178507 102.5 83.292 102.5 2 S LQESLQLSTEPRGPGSPPRTPPAPGPPSFEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP GPGS(1)PPRT(1)PPAPGPPSFEEQLR GPGS(67)PPRT(46.45)PPAPGPPS(-46.45)FEEQLR 4 3 -1.773 0 8710.8 0 0 6130.4 0 0 10230 0 0 6985.6 0 0 6383.6 0 0 9682.9 0 0 7074.6 0 0 7276.4 0 0 7279.1 0 0 13753 0 0 8248.3 0 0 5796 0 0 10168 0 0 7163.8 0 0 6715.1 0 0 9581 0 0 7173.8 0 0 7806.5 0 0 7173.6 0 0 13119 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 22758000 0 22758000 0 NaN 2321 1300 465 465 1545 1627 1756 1949 1756 1949 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16529 1756 1949 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16529 1756 1949 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16529 Q6ZU65 13 Q6ZU65 Q6ZU65 Ubinuclein-2 UBN2 sp|Q6ZU65|UBN2_HUMAN Ubinuclein-2 OS=Homo sapiens GN=UBN2 PE=1 SV=2 0.995633 23.5788 3.46447E-07 162.79 130.73 162.79 1 S ___MAEPRRVAFISLSPVRRREAEYPGPERE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX RVAFIS(0.004)LS(0.996)PVR RVAFIS(-23.58)LS(23.58)PVR 8 3 -0.10967 1317.6 0 0 3803.9 0 0 2036.9 0 0 3715.2 0 0 2208.2 0 0 2198.1 0 0 1506.5 0 0 2624.9 0 0 4800 0 0 2462.1 0 0 1249.5 0 0 3592.9 0 0 2010.4 0 0 3795.7 0 0 2223.9 0 0 2280.9 0 0 1657.4 0 0 2690.6 0 0 4596.5 0 0 2379.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22211000 22211000 0 0 NaN 2322 1301 13 13 3541 3759 4005 4445 4005 4445 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19024 4005 4445 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19024 4005 4445 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19024 Q6ZU80 1008 Q6ZU80 Q6ZU80 Centrosomal protein of 128 kDa CEP128 sp|Q6ZU80|CE128_HUMAN Centrosomal protein of 128 kDa OS=Homo sapiens GN=CEP128 PE=1 SV=2 1 78.9335 9.99499E-06 136.35 88.17 136.35 1 S ERTDGRYSKYRVRRNSLQHHQDDTKYRTKSF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX RNS(1)LQHHQDDTK RNS(78.93)LQHHQDDT(-78.93)K 3 4 0.12814 4229.6 0 0 1797 0 0 4781.3 0 0 1724.1 0 0 2963.8 0 0 4597.6 0 0 1958.1 0 0 3520.7 0 0 1850.5 0 0 1693.6 0 0 4004.4 0 0 1697.1 0 0 4758.6 0 0 1820.9 0 0 3100.7 0 0 4469.9 0 0 2038.5 0 0 3624.3 0 0 1830.5 0 0 1676.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 4944600 4944600 0 0 NaN 2323 1302 1008 1008 3363 3567 3806 4225 3806 4225 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5303 3806 4225 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5303 3806 4225 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5303 Q6ZUJ8 656 Q6ZUJ8 Q6ZUJ8 Phosphoinositide 3-kinase adapter protein 1 PIK3AP1 sp|Q6ZUJ8|BCAP_HUMAN Phosphoinositide 3-kinase adapter protein 1 OS=Homo sapiens GN=PIK3AP1 PE=1 SV=2 0.962836 14.1343 0.0509186 48.091 11.71 48.091 1 S ESFRFQQENLKRLRDSITRRQREKQKSGKQT X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX LRDS(0.963)IT(0.037)R LRDS(14.13)IT(-14.13)R 4 2 -0.10135 53303 0 0 27224 0 0 55581 0 0 29052 0 0 22757 0 0 54228 0 0 20522 0 0 27160 0 0 16346 0 0 4751 0 0 50447 0 0 25728 0 0 55430 0 0 30122 0 0 24996 0 0 52901 0 0 20882 0 0 28436 0 0 16306 0 0 5102.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23091000 23091000 0 0 NaN 2324 1303 656 656 2534 2677 2873 3205 2873 3205 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8696 2873 3205 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8696 2873 3205 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8696 Q6ZUJ8 174 Q6ZUJ8 Q6ZUJ8 Phosphoinositide 3-kinase adapter protein 1 PIK3AP1 sp|Q6ZUJ8|BCAP_HUMAN Phosphoinositide 3-kinase adapter protein 1 OS=Homo sapiens GN=PIK3AP1 PE=1 SV=2 0.72583 5.50386 0.0018168 96.679 75.145 96.679 1 S KVVSYSKQQNLPTVTSPGNLMVVQPDRIRCG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPPXXXX QQNLPT(0.07)VT(0.204)S(0.726)PGNLMVVQPDR QQNLPT(-10.17)VT(-5.5)S(5.5)PGNLMVVQPDR 9 3 0.2549 17481 0 0 16834 0 0 18147 0 0 16423 0 0 14977 0 0 19455 0 0 15052 0 0 18443 0 0 19035 0 0 32655 0 0 16544 0 0 15900 0 0 18196 0 0 16936 0 0 15390 0 0 19414 0 0 15427 0 0 19523 0 0 18613 0 0 31176 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 231790000 231790000 0 0 NaN 2325 1303 174 174 3117 3306;3307 3536;3537 3920;3921 3537 3921 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19442 3537 3921 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19442 3537 3921 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19442 Q6ZUJ8 642 Q6ZUJ8 Q6ZUJ8 Phosphoinositide 3-kinase adapter protein 1 PIK3AP1 sp|Q6ZUJ8|BCAP_HUMAN Phosphoinositide 3-kinase adapter protein 1 OS=Homo sapiens GN=PIK3AP1 PE=1 SV=2 0.9555 13.3187 9.82392E-06 136.34 113.54 136.34 1 S LHFKEWQLNQKKRSESFRFQQENLKRLRDSI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX S(0.045)ES(0.955)FRFQQENLK S(-13.32)ES(13.32)FRFQQENLK 3 3 1.3127 47683 0 0 9210 0 0 52556 0 0 9964.8 0 0 12080 0 0 48239 0 0 11129 0 0 23279 0 0 9431.1 0 0 8241.9 0 0 45138 0 0 8704.7 0 0 52143 0 0 10801 0 0 14634 0 0 46347 0 0 11328 0 0 24566 0 0 9377.7 0 0 8299.5 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 55075000 55075000 0 0 NaN 2326 1303 642 642 3701;3702 3936;3937 4196;4197 4662;4663 4196 4662 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15289 4196 4662 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15289 4196 4662 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15289 Q6ZUJ8 757 Q6ZUJ8 Q6ZUJ8 Phosphoinositide 3-kinase adapter protein 1 PIK3AP1 sp|Q6ZUJ8|BCAP_HUMAN Phosphoinositide 3-kinase adapter protein 1 OS=Homo sapiens GN=PIK3AP1 PE=1 SV=2 0.5 0 0.00271348 94.449 78.326 94.449 1 S MEGDNEDNEVPEVTRSRSPGPPQVDGTPTMS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.5)RS(0.5)PGPPQVDGTPTMSLERPPR S(0)RS(0)PGPPQVDGT(-76.45)PT(-87.96)MS(-87.74)LERPPR 1 4 0.63866 33522 0 0 12945 0 0 35011 0 0 13904 0 0 17698 0 0 35530 0 0 17906 0 0 20907 0 0 15489 0 0 6796.7 0 0 31726 0 0 12234 0 0 34957 0 0 14565 0 0 18983 0 0 34478 0 0 18151 0 0 21742 0 0 15386 0 0 6883.7 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 33959000 33959000 0 0 NaN 2327 1303 757 757 4287 4570 4870 5404;5405 4870 5405 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12617 4870 5405 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12617 4870 5405 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12617 Q6ZUJ8 759 Q6ZUJ8 Q6ZUJ8 Phosphoinositide 3-kinase adapter protein 1 PIK3AP1 sp|Q6ZUJ8|BCAP_HUMAN Phosphoinositide 3-kinase adapter protein 1 OS=Homo sapiens GN=PIK3AP1 PE=1 SV=2 0.5 0 0.00271348 94.449 78.326 94.449 1 S GDNEDNEVPEVTRSRSPGPPQVDGTPTMSLE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.5)RS(0.5)PGPPQVDGTPTMSLERPPR S(0)RS(0)PGPPQVDGT(-76.45)PT(-87.96)MS(-87.74)LERPPR 3 4 0.63866 33522 0 0 12945 0 0 35011 0 0 13904 0 0 17698 0 0 35530 0 0 17906 0 0 20907 0 0 15489 0 0 6796.7 0 0 31726 0 0 12234 0 0 34957 0 0 14565 0 0 18983 0 0 34478 0 0 18151 0 0 21742 0 0 15386 0 0 6883.7 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 33959000 33959000 0 0 NaN 2328 1303 759 759 4287 4570 4870 5404;5405 4870 5405 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12617 4870 5405 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12617 4870 5405 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12617 Q6ZUM4 632 Q6ZUM4 Q6ZUM4 Rho GTPase-activating protein 27 ARHGAP27 sp|Q6ZUM4|RHG27_HUMAN Rho GTPase-activating protein 27 OS=Homo sapiens GN=ARHGAP27 PE=1 SV=3 0.943352 12.2149 0.0109508 84.31 41.446 84.31 1 S ELPPEESESSRVDFGSSERLGSWQEKEEDAR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX VDFGS(0.943)S(0.057)ER VDFGS(12.21)S(-12.21)ER 5 2 -0.028729 17258 0 0 8575.2 0 0 18770 0 0 8918 0 0 34210 0 0 18688 0 0 36865 0 0 21441 0 0 9113.8 0 0 3983.2 0 0 16337 0 0 8102.7 0 0 19008 0 0 9292.8 0 0 33816 0 0 18338 0 0 36638 0 0 21520 0 0 10170 0 0 4246.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 47611000 47611000 0 0 NaN 2329 1304 632 632 5067 5401 5753 6392 5753 6392 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11930 5753 6392 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11930 5753 6392 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11930 Q6ZUT1 137 Q6ZUT1 Q6ZUT1 Uncharacterized protein C11orf57 C11orf57 sp|Q6ZUT1|CK057_HUMAN Uncharacterized protein C11orf57 OS=Homo sapiens GN=C11orf57 PE=1 SV=2 0.925754 10.9582 0.0150591 68.132 28.065 68.132 1 S ETDSDQQDITNGKKTSPQVKSSTHESRKHKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX KT(0.074)S(0.926)PQVK KT(-10.96)S(10.96)PQVK 3 3 -0.050738 50348 0 0 44504 0 0 50041 0 0 46668 0 0 41463 0 0 49567 0 0 43463 0 0 51570 0 0 52500 0 0 399.22 0 0 47641 0 0 42054 0 0 50305 0 0 47832 0 0 42620 0 0 49580 0 0 44393 0 0 51663 0 0 51418 0 0 1569.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 87652000 87652000 0 0 NaN 2330 1305 137 137 2253 2381 2563 2861 2563 2861 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8514 2563 2861 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8514 2563 2861 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8514 Q709C8 3484 Q709C8 Q709C8 Vacuolar protein sorting-associated protein 13C VPS13C sp|Q709C8|VP13C_HUMAN Vacuolar protein sorting-associated protein 13C OS=Homo sapiens GN=VPS13C PE=1 SV=1 0.802082 6.07733 0.0495547 51.445 17.133 51.445 1 S HTVGGAAGVVSRITGSVGKGLAAITMDKEYQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX IT(0.198)GS(0.802)VGK IT(-6.08)GS(6.08)VGK 4 2 0.0077677 19165 0 0 14535 0 0 20784 0 0 16427 0 0 20341 0 0 21513 0 0 20503 0 0 18806 0 0 15929 0 0 4628.6 0 0 18141 0 0 13742 0 0 20830 0 0 16833 0 0 20666 0 0 21311 0 0 20738 0 0 19109 0 0 15911 0 0 4793.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11211000 11211000 0 0 NaN 2331 1306 3484 3484 1960 2071 2235 2497 2235 2497 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12015 2235 2497 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12015 2235 2497 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12015 Q709C8 737 Q709C8 Q709C8 Vacuolar protein sorting-associated protein 13C VPS13C sp|Q709C8|VP13C_HUMAN Vacuolar protein sorting-associated protein 13C OS=Homo sapiens GN=VPS13C PE=1 SV=1 0.919337 10.5713 1.08805E-07 169.98 125.53 169.98 1 S QLNSKDQGLQKTTNSSLEEIMDKAYDKFDVE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX TTNS(0.081)S(0.919)LEEIMDK T(-44.7)T(-44.7)NS(-10.57)S(10.57)LEEIMDK 5 2 0.57118 17116 0 0 11967 0 0 17950 0 0 11142 0 0 13293 0 0 18701 0 0 16062 0 0 17135 0 0 11174 0 0 25111 0 0 16199 0 0 11301 0 0 17975 0 0 11612 0 0 13800 0 0 18435 0 0 16083 0 0 18005 0 0 11233 0 0 24042 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13898000 13898000 0 0 NaN 2332 1306 737 737 4979 5308 5655 6284 5655 6284 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18324 5655 6284 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18324 5655 6284 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18324 Q70J99 150 Q70J99 Q70J99 Protein unc-13 homolog D UNC13D sp|Q70J99|UN13D_HUMAN Protein unc-13 homolog D OS=Homo sapiens GN=UNC13D PE=1 SV=1 0.860803 7.91275 1.15545E-17 218.25 206.6 218.25 1 S YCLLGIEQGVGVPGGSPGSRHRQKAVVRHTI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX DVSGFSDPYCLLGIEQGVGVPGGS(0.861)PGS(0.139)R DVS(-152.99)GFS(-144.48)DPY(-147.49)CLLGIEQGVGVPGGS(7.91)PGS(-7.91)R 24 3 0.46877 11356 0 0 54706 0 0 35036 0 0 15714 0 0 54975 0 0 28916 0 0 86170 0 0 69857 0 0 47614 0 0 138860 0 0 10834 0 0 51456 0 0 34221 0 0 18727 0 0 55016 0 0 29170 0 0 85160 0 0 72669 0 0 48616 0 0 132370 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1388300000 1388300000 0 0 NaN 2333 1307 150 150 842 890 946 1041 946 1041 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23602 946 1041 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23602 946 1041 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23602 Q71F23 29 Q71F23 Q71F23 Centromere protein U CENPU sp|Q71F23|CENPU_HUMAN Centromere protein U OS=Homo sapiens GN=CENPU PE=1 SV=1 0.984231 17.953 0.00967287 77.379 46.721 77.379 1 S SEGARRSKNTLERTHSMKDKAGQKCKPIDVF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX T(0.016)HS(0.984)MKDK T(-17.95)HS(17.95)MKDK 3 3 -0.25831 26483 0 0 35757 0 0 31665 0 0 34116 0 0 18663 0 0 28326 0 0 20443 0 0 28365 0 0 32180 0 0 1854.7 0 0 25079 0 0 33769 0 0 31431 0 0 35036 0 0 19743 0 0 28655 0 0 21045 0 0 28506 0 0 31254 0 0 2402.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 44262000 44262000 0 0 NaN 2334 1308 29 29 4739 5054 5386 5989 5386 5989 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6934 5386 5989 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6934 5386 5989 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6934 Q71RC2 597 Q71RC2 Q71RC2 La-related protein 4 LARP4 sp|Q71RC2|LARP4_HUMAN La-related protein 4 OS=Homo sapiens GN=LARP4 PE=1 SV=3 0.98177 17.9062 2.44687E-12 187.48 168.98 187.48 1 S VSPPSTTKPSRASTASPCNNNINAATAVALQ X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP AS(0.002)T(0.016)AS(0.982)PCNNNINAATAVALQEPR AS(-26.25)T(-17.91)AS(17.91)PCNNNINAAT(-117.03)AVALQEPR 5 3 -1.0765 6464.3 0 0 6382.6 0 0 5581.9 0 0 7278.9 0 0 5790.2 0 0 6021.6 0 0 7237.3 0 0 4857.6 0 0 6633.6 0 0 19515 0 0 6113.5 0 0 6034.5 0 0 5676.6 0 0 7398.8 0 0 5883.5 0 0 6114 0 0 7280.9 0 0 5505.6 0 0 6571 0 0 18488 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 139050000 139050000 0 0 NaN 2335 1309 597 597 512 544 584 651 584 651 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16016 584 651 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16016 584 651 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16016 Q71RC2 583 Q71RC2 Q71RC2 La-related protein 4 LARP4 sp|Q71RC2|LARP4_HUMAN La-related protein 4 OS=Homo sapiens GN=LARP4 PE=1 SV=3 0.930862 15.6811 1.51716E-07 140.8 108.98 140.8 1 S SSVQKDGLNQTTIPVSPPSTTKPSRASTASP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXPPPPPPPPPPPPPPPPPPPPXXXXXX DGLNQTTIPVS(0.931)PPS(0.019)T(0.025)T(0.025)KPSR DGLNQT(-45.28)T(-38.53)IPVS(15.68)PPS(-17)T(-15.68)T(-15.68)KPS(-40.5)R 11 3 0.69613 20930 0 0 29996 0 0 20546 0 0 32609 0 0 18941 0 0 21451 0 0 16802 0 0 23516 0 0 33994 0 0 20629 0 0 19803 0 0 28351 0 0 20687 0 0 33143 0 0 19302 0 0 22065 0 0 17676 0 0 24130 0 0 32813 0 0 19969 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 64797000 64797000 0 0 NaN 2336 1309 583 583 680 724 772 853;854 772 853 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14511 772 853 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14511 772 853 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14511 Q71RC2 722 Q71RC2 Q71RC2 La-related protein 4 LARP4 sp|Q71RC2|LARP4_HUMAN La-related protein 4 OS=Homo sapiens GN=LARP4 PE=1 SV=3 0.999999 62.4439 0.00412117 88.561 53.877 88.561 1 S GVTRRNGKEQYVPPRSPK_____________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX EQYVPPRS(1)PK EQY(-62.44)VPPRS(62.44)PK 8 3 0.077612 49600 0 0 79512 0 0 52778 0 0 80129 0 0 48013 0 0 55724 0 0 53731 0 0 65101 0 0 81311 0 0 9732.2 0 0 46946 0 0 75115 0 0 52914 0 0 81844 0 0 49112 0 0 57080 0 0 55174 0 0 65231 0 0 79060 0 0 10671 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 47331000 47331000 0 0 NaN 2337 1309 722 722 1110 1169 1258 1382;1383;1384 1258 1382 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9422 1258 1382 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9422 1258 1382 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9422 Q75N03 278 Q75N03 Q75N03 E3 ubiquitin-protein ligase Hakai CBLL1 sp|Q75N03|HAKAI_HUMAN E3 ubiquitin-protein ligase Hakai OS=Homo sapiens GN=CBLL1 PE=1 SV=1 0.942017 12.1498 0.0138333 79.07 46.715 79.07 1 S PPAELSMAPPPPRSVSQETFRISTRKHSNLI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX S(0.057)VS(0.942)QET(0.001)FR S(-12.15)VS(12.15)QET(-32.25)FR 3 2 1.1212 13359 0 0 23719 0 0 15455 0 0 25933 0 0 20526 0 0 14984 0 0 20771 0 0 20551 0 0 27738 0 0 5628.1 0 0 12649 0 0 22419 0 0 15504 0 0 26316 0 0 20540 0 0 15588 0 0 21322 0 0 20568 0 0 27074 0 0 5775.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11287000 11287000 0 0 NaN 2338 1310 278 278 4573 4878 5196 5771 5196 5771 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10690 5196 5771 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10690 5196 5771 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10690 Q765P7 612 Q765P7 Q765P7 MTSS1-like protein MTSS1L sp|Q765P7|MTSSL_HUMAN MTSS1-like protein OS=Homo sapiens GN=MTSS1L PE=1 SV=1 0.999999 59.8691 6.155E-18 235.7 212.48 235.7 1 S TVPDSPGYMGPTRAGSEECVFYTDETASPLA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP AGS(1)EECVFYTDETASPLAPDLAK AGS(59.87)EECVFY(-113.8)T(-59.87)DET(-134.9)AS(-170.43)PLAPDLAK 3 3 -0.51573 9679.9 0 0 7322.7 0 0 11959 0 0 7510 0 0 6022.3 0 0 10754 0 0 5986.1 0 0 12607 0 0 6612.9 0 0 130890 0 0 9168.2 0 0 6918.6 0 0 11838 0 0 7751.7 0 0 6462.1 0 0 10905 0 0 6112.3 0 0 16518 0 0 6498.3 0 0 123540 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30418000 30418000 0 0 NaN 2339 1311 612 612 222 236 254 282 254 282 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22040 254 282 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22040 254 282 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22040 Q765P7 579 Q765P7 Q765P7 MTSS1-like protein MTSS1L sp|Q765P7|MTSSL_HUMAN MTSS1-like protein OS=Homo sapiens GN=MTSS1L PE=1 SV=1 0.774201 5.35131 7.44653E-05 107.25 89.09 107.25 1 S IRRTPSTKPTVRRALSSAGPIPIRPPIVPVK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP ALS(0.774)S(0.226)AGPIPIRPPIVPVK ALS(5.35)S(-5.35)AGPIPIRPPIVPVK 3 3 0.14741 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2340 1311 579 579 321 342 365 405 365 405 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22242 365 405 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22242 365 405 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22242 Q765P7 456 Q765P7 Q765P7 MTSS1-like protein MTSS1L sp|Q765P7|MTSSL_HUMAN MTSS1-like protein OS=Homo sapiens GN=MTSS1L PE=1 SV=1 1 161.174 1.34766E-05 161.17 111.82 161.17 1 S SPAASDLAMVLTRGLSLEHQKSSRDSLQYSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX GLS(1)LEHQK GLS(161.17)LEHQK 3 2 -0.92818 37532 0 0 27155 0 0 40232 0 0 25118 0 0 24916 0 0 38534 0 0 26530 0 0 28025 0 0 26022 0 0 8838 0 0 35525 0 0 25641 0 0 40172 0 0 26130 0 0 26212 0 0 37911 0 0 26914 0 0 28784 0 0 25698 0 0 8970.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23739000 23739000 0 0 NaN 2341 1311 456 456 1514 1594 1723 1915 1723 1915 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11610 1723 1915 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11610 1723 1915 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11610 Q76FK4 662 Q76FK4 Q76FK4 Nucleolar protein 8 NOL8 sp|Q76FK4|NOL8_HUMAN Nucleolar protein 8 OS=Homo sapiens GN=NOL8 PE=1 SV=1 0.777693 5.49646 0.00368813 91.784 64.258 91.784 1 S RQTTFESQDRKAVSPSSSEKRSKNPISRPLE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX AVS(0.219)PS(0.778)S(0.003)SEKR AVS(-5.5)PS(5.5)S(-24.27)S(-43.97)EKR 5 3 0.21411 19778 0 0 15738 0 0 19671 0 0 14795 0 0 10606 0 0 20252 0 0 12616 0 0 17038 0 0 16900 0 0 2872.2 0 0 18714 0 0 14862 0 0 19707 0 0 15337 0 0 11331 0 0 20021 0 0 12863 0 0 17301 0 0 16494 0 0 3098.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12376000 12376000 0 0 NaN 2342 1312 662 662 569 607 648 723 648 723 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6697 648 723 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6697 648 723 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6697 Q76FK4 1098 Q76FK4 Q76FK4 Nucleolar protein 8 NOL8 sp|Q76FK4|NOL8_HUMAN Nucleolar protein 8 OS=Homo sapiens GN=NOL8 PE=1 SV=1 0.653818 2.76451 0.00198502 95.761 58.57 95.761 1 S SSEEEDVTEETDHRNSSPGEASLLEKETTRF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPXXXXX NS(0.654)S(0.346)PGEASLLEK NS(2.76)S(-2.76)PGEAS(-34.39)LLEK 2 3 0.10983 11266 0 0 10818 0 0 10420 0 0 11092 0 0 7387.4 0 0 11305 0 0 7916.3 0 0 12188 0 0 12197 0 0 4449.5 0 0 10658 0 0 10221 0 0 10505 0 0 11376 0 0 7687.3 0 0 11342 0 0 8149.9 0 0 12325 0 0 11853 0 0 4471.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16275000 16275000 0 0 NaN 2343 1312 1098 1098 2942 3121 3342 3706 3342 3706 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15661 3342 3706 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15661 3342 3706 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15661 Q76FK4 1099 Q76FK4 Q76FK4 Nucleolar protein 8 NOL8 sp|Q76FK4|NOL8_HUMAN Nucleolar protein 8 OS=Homo sapiens GN=NOL8 PE=1 SV=1 0.996928 25.1458 5.01241E-11 199.33 129.68 199.33 1 S SEEEDVTEETDHRNSSPGEASLLEKETTRFF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX NS(0.003)S(0.997)PGEASLLEK NS(-25.15)S(25.15)PGEAS(-46.19)LLEK 3 2 0.551 17747 0 0 18575 0 0 15612 0 0 17368 0 0 10233 0 0 15956 0 0 10421 0 0 13723 0 0 16592 0 0 17979 0 0 16786 0 0 17540 0 0 15777 0 0 17884 0 0 10711 0 0 16063 0 0 10768 0 0 14394 0 0 16110 0 0 17247 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15063000 15063000 0 0 NaN 2344 1312 1099 1099 2942 3121 3341 3705 3341 3705 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15638 3341 3705 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15638 3341 3705 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15638 Q76FK4 268 Q76FK4 Q76FK4 Nucleolar protein 8 NOL8 sp|Q76FK4|NOL8_HUMAN Nucleolar protein 8 OS=Homo sapiens GN=NOL8 PE=1 SV=1 0.928878 11.4018 7.80562E-08 157.9 131.9 157.9 1 S AAQKRTCDSITPSKSSPVPVSDTQKLKNLPF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPXXXXXX TCDSITPSKS(0.067)S(0.929)PVPVS(0.004)DTQK T(-86.81)CDS(-73.58)IT(-51.45)PS(-35.5)KS(-11.4)S(11.4)PVPVS(-24.14)DT(-48.49)QK 11 3 -0.754 12943 0 0 13211 0 0 13323 0 0 12933 0 0 6439.3 0 0 14015 0 0 7662.9 0 0 11395 0 0 12981 0 0 11351 0 0 12249 0 0 12479 0 0 13312 0 0 13314 0 0 6963.4 0 0 13988 0 0 7887 0 0 11874 0 0 12583 0 0 10952 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11624000 11624000 0 0 NaN 2345 1312 268 268 4646 4957 5281 5867 5281 5867 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13211 5281 5867 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13211 5281 5867 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13211 Q76L83 1154 Q76L83 Q76L83 Putative Polycomb group protein ASXL2 ASXL2 sp|Q76L83|ASXL2_HUMAN Putative Polycomb group protein ASXL2 OS=Homo sapiens GN=ASXL2 PE=1 SV=1 0.473774 0 0.00960625 83.652 57.654 83.652 S RRTHSVNPEDRFCLSSPTEALKMGYTDCKNA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX FCLS(0.052)S(0.474)PT(0.474)EALK FCLS(-9.56)S(0)PT(0)EALK 5 2 0.018873 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2346 1313 1154 1154 1242 1307 1408 1560 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20692 1408 1560 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20692 1408 1560 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20692 Q76L83 571 Q76L83 Q76L83 Putative Polycomb group protein ASXL2 ASXL2 sp|Q76L83|ASXL2_HUMAN Putative Polycomb group protein ASXL2 OS=Homo sapiens GN=ASXL2 PE=1 SV=1 0.868448 11.2068 1.04622E-15 218.74 175.21 218.74 1 S ATLVDQSPESLKRKSSLTQEEAPVSWEKRPR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX KS(0.066)S(0.868)LT(0.066)QEEAPVSWEK KS(-11.21)S(11.21)LT(-11.21)QEEAPVS(-135.49)WEK 3 3 0.55249 18143 0 0 9108.6 0 0 19884 0 0 10172 0 0 21118 0 0 18777 0 0 20360 0 0 20311 0 0 10462 0 0 15841 0 0 17175 0 0 8610.6 0 0 19936 0 0 10518 0 0 21337 0 0 18486 0 0 20490 0 0 20792 0 0 10742 0 0 15387 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27585000 27585000 0 0 NaN 2347 1313 571 571 2230 2358 2539 2836 2539 2836 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16363 2539 2836 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16363 2539 2836 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16363 Q7KZF4 426 Q7KZF4 Q7KZF4 Staphylococcal nuclease domain-containing protein 1 SND1 sp|Q7KZF4|SND1_HUMAN Staphylococcal nuclease domain-containing protein 1 OS=Homo sapiens GN=SND1 PE=1 SV=1 0.999749 36.0399 2.45376E-24 255.56 234.66 255.56 1 S IGKKVNVTVDYIRPASPATETVPAFSERTCA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPPPPPXXX VNVTVDYIRPAS(1)PATETVPAFSER VNVT(-56.25)VDY(-141.91)IRPAS(36.04)PAT(-36.04)ET(-72.75)VPAFS(-157.19)ER 12 3 -0.042011 19352 0 0 27202 0 0 18241 0 0 26917 0 0 16387 0 0 19623 0 0 18075 0 0 23286 0 0 30243 0 0 44368 0 0 18308 0 0 25695 0 0 18412 0 0 27538 0 0 16774 0 0 20124 0 0 18651 0 0 24552 0 0 29324 0 0 42316 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 94174000 94174000 0 0 NaN 2348 1314 426 426 2265;5198 2394;5541 2577;5905 2879;2880;6562 5905 6562 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19708 5905 6562 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19708 5905 6562 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19708 Q7KZI7 486 Q7KZI7 Q7KZI7 Serine/threonine-protein kinase MARK2 MARK2 sp|Q7KZI7|MARK2_HUMAN Serine/threonine-protein kinase MARK2 OS=Homo sapiens GN=MARK2 PE=1 SV=2 0.991009 20.4225 0.0213007 61.989 38.466 61.989 1 S STNSVLSTSTNRSRNSPLLERASLGQASIQN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX S(0.009)RNS(0.991)PLLER S(-20.42)RNS(20.42)PLLER 4 2 0.062877 19701 0 0 25293 0 0 18718 0 0 24908 0 0 19168 0 0 19210 0 0 19150 0 0 23161 0 0 28300 0 0 3961 0 0 18638 0 0 23891 0 0 18910 0 0 25506 0 0 19433 0 0 19566 0 0 19745 0 0 23198 0 0 27536 0 0 4265.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 57129000 57129000 0 0 NaN 2349 1315 486 486 4268 4547 4846 5378 4846 5378 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8121 4846 5378 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8121 4846 5378 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8121 Q7KZI7 400 Q7KZI7 Q7KZI7 Serine/threonine-protein kinase MARK2 MARK2 sp|Q7KZI7|MARK2_HUMAN Serine/threonine-protein kinase MARK2 OS=Homo sapiens GN=MARK2 PE=1 SV=2 0.955062 13.2741 0.0170666 76.143 40.919 76.143 1 S NSSAPSPSHKVQRSVSANPKQRRFSDQAAGP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX S(0.045)VS(0.955)ANPK S(-13.27)VS(13.27)ANPK 3 2 0.053322 30967 0 0 40020 0 0 32334 0 0 40998 0 0 21789 0 0 31665 0 0 24061 0 0 32697 0 0 44710 0 0 4980.7 0 0 29308 0 0 37811 0 0 32355 0 0 41886 0 0 22786 0 0 32178 0 0 24948 0 0 32908 0 0 43240 0 0 5446.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 62116000 62116000 0 0 NaN 2350 1315 400 400 4563 4867 5184 5756 5184 5756 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8308 5184 5756 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8308 5184 5756 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8308 Q7KZI7 456 Q7KZI7 Q7KZI7 Serine/threonine-protein kinase MARK2 MARK2 sp|Q7KZI7|MARK2_HUMAN Serine/threonine-protein kinase MARK2 OS=Homo sapiens GN=MARK2 PE=1 SV=2 1 164.212 4.46275E-07 164.21 123.97 164.21 1 S RESGRKASSTAKVPASPLPGLERKKTTPTPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX VPAS(1)PLPGLER VPAS(164.21)PLPGLER 4 2 -0.28754 18191 0 0 31432 0 0 21241 0 0 31084 0 0 20517 0 0 23517 0 0 18858 0 0 24795 0 0 31277 0 0 21988 0 0 17225 0 0 29691 0 0 21201 0 0 31816 0 0 20852 0 0 23967 0 0 19616 0 0 25484 0 0 30334 0 0 21278 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 108840000 108840000 0 0 NaN 2351 1315 456 456 5201 5545 5909 6566 5909 6566 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17053 5909 6566 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17053 5909 6566 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17053 Q7L014 774 Q7L014 Q7L014 Probable ATP-dependent RNA helicase DDX46 DDX46 sp|Q7L014|DDX46_HUMAN Probable ATP-dependent RNA helicase DDX46 OS=Homo sapiens GN=DDX46 PE=1 SV=2 0.995133 24.5982 0.0112186 86.18 68.272 86.18 1 S QQKAEGKIIKKSSGFSGKGFKFDETEQALAN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX S(0.003)S(0.001)GFS(0.995)GK S(-24.6)S(-28.47)GFS(24.6)GK 5 2 0.2899 23232 0 0 35721 0 0 24107 0 0 35869 0 0 42100 0 0 20939 0 0 49252 0 0 39022 0 0 36291 0 0 5198.1 0 0 21987 0 0 33745 0 0 24458 0 0 36580 0 0 41750 0 0 21891 0 0 49436 0 0 38597 0 0 36358 0 0 5797.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26759000 26759000 0 0 NaN 2352 1316 774 774 4346 4632 4935 5479 4935 5479 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10392 4935 5479 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10392 4935 5479 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10392 Q7L2J0 60 Q7L2J0 Q7L2J0 7SK snRNA methylphosphate capping enzyme MEPCE sp|Q7L2J0|MEPCE_HUMAN 7SK snRNA methylphosphate capping enzyme OS=Homo sapiens GN=MEPCE PE=1 SV=1 0.999609 34.0781 1.82933E-12 213.16 191.24 213.16 1 S GGTERGPGRCAPSAGSPAAAVGRESPGAAAT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPXXXXXXXX CAPSAGS(1)PAAAVGR CAPS(-34.08)AGS(34.08)PAAAVGR 7 2 0.3365 16476 0 0 18993 0 0 16420 0 0 19199 0 0 18330 0 0 15566 0 0 16044 0 0 18529 0 0 20631 0 0 10599 0 0 15590 0 0 17943 0 0 16557 0 0 19642 0 0 18461 0 0 15822 0 0 16567 0 0 18791 0 0 20162 0 0 10409 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 44103000 44103000 0 0 NaN 2353 1317 60 60 596 635 677 752 677 752 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9268 677 752 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9268 677 752 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9268 Q7L2J0 330 Q7L2J0 Q7L2J0 7SK snRNA methylphosphate capping enzyme MEPCE sp|Q7L2J0|MEPCE_HUMAN 7SK snRNA methylphosphate capping enzyme OS=Homo sapiens GN=MEPCE PE=1 SV=1 0.980928 17.1127 6.37763E-06 127.45 117.86 127.45 1 S PYELNTAINCRDEVVSPLPSALQGPSGSLSA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP DEVVS(0.981)PLPS(0.019)ALQGPSGSLSAPPAASVISAPPSSSSR DEVVS(17.11)PLPS(-17.11)ALQGPS(-58.69)GS(-63.69)LS(-73.36)APPAAS(-103.41)VIS(-113.21)APPS(-122.76)S(-122.61)S(-122.46)S(-122.31)R 5 3 -1.467 509.34 0 0 1504.5 0 0 998.37 0 0 1410.5 0 0 1624.9 0 0 910.75 0 0 1086.1 0 0 1603.1 0 0 2145.1 0 0 22016 0 0 483.8 0 0 1420.7 0 0 983.84 0 0 1446 0 0 1605.4 0 0 985.34 0 0 1160.4 0 0 2244.6 0 0 2071.7 0 0 20768 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9426300 9426300 0 0 NaN 2354 1317 330 330 665 709 756 836 756 836 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21475 756 836 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21475 756 836 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21475 Q7L2J0 254 Q7L2J0 Q7L2J0 7SK snRNA methylphosphate capping enzyme MEPCE sp|Q7L2J0|MEPCE_HUMAN 7SK snRNA methylphosphate capping enzyme OS=Homo sapiens GN=MEPCE PE=1 SV=1 1 77.6573 9.95991E-13 206.57 189.95 206.57 1 S LSLNTCTDEGHVVLASPLKTGRKRHRHRGQH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX DITDPLSLNTCTDEGHVVLAS(1)PLK DIT(-147.86)DPLS(-125.84)LNT(-103.3)CT(-77.66)DEGHVVLAS(77.66)PLK 21 3 -0.01583 10151 0 0 12042 0 0 10837 0 0 13102 0 0 9874.4 0 0 10332 0 0 9819.5 0 0 12114 0 0 12703 0 0 57240 0 0 9608.1 0 0 11382 0 0 10860 0 0 13344 0 0 10079 0 0 10610 0 0 10077 0 0 13807 0 0 12412 0 0 54179 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 191230000 191230000 0 0 NaN 2355 1317 254 254 711 755 805;806 890;891 805 890 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21776 805 890 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21776 805 890 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21776 Q7L2J0 69 Q7L2J0 Q7L2J0 7SK snRNA methylphosphate capping enzyme MEPCE sp|Q7L2J0|MEPCE_HUMAN 7SK snRNA methylphosphate capping enzyme OS=Homo sapiens GN=MEPCE PE=1 SV=1 1 69.5371 3.00487E-11 196.83 172.3 196.83 1 S CAPSAGSPAAAVGRESPGAAATSSSGPQAQQ X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP ES(1)PGAAATSSSGPQAQQHR ES(69.54)PGAAAT(-69.54)S(-99.54)S(-114.48)S(-128.26)GPQAQQHR 2 3 -0.90387 2364.7 0 0 2030 0 0 2574.5 0 0 3493.2 0 0 2668.4 0 0 2172.6 0 0 3073 0 0 2996.5 0 0 2442.7 0 0 2378.1 0 0 2238.4 0 0 1926 0 0 2582.2 0 0 3476.2 0 0 2707.5 0 0 2251.5 0 0 3091.3 0 0 3045.4 0 0 2436.9 0 0 2308.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11221000 11221000 0 0 NaN 2356 1317 69 69 1160 1221 1318 1457 1318 1457 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5957 1318 1457 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5957 1318 1457 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5957 Q7L2J0 152 Q7L2J0 Q7L2J0 7SK snRNA methylphosphate capping enzyme MEPCE sp|Q7L2J0|MEPCE_HUMAN 7SK snRNA methylphosphate capping enzyme OS=Homo sapiens GN=MEPCE PE=1 SV=1 1 122.526 9.46719E-05 122.53 102.4 122.53 1 S QPHRPPGGGGGKRRNSCNVGGGGGGFKHPAF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX RNS(1)CNVGGGGGGFK RNS(122.53)CNVGGGGGGFK 3 3 -0.14675 38984 0 0 20633 0 0 40436 0 0 22678 0 0 30582 0 0 39794 0 0 28523 0 0 30503 0 0 21981 0 0 3873.6 0 0 36894 0 0 19503 0 0 40508 0 0 23435 0 0 31581 0 0 39014 0 0 28953 0 0 31073 0 0 21966 0 0 4353.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 89835000 89835000 0 0 NaN 2357 1317 152 152 3358 3561 3799 4217 3799 4217 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9196 3799 4217 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9196 3799 4217 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9196 Q7L2J0 217 Q7L2J0 Q7L2J0 7SK snRNA methylphosphate capping enzyme MEPCE sp|Q7L2J0|MEPCE_HUMAN 7SK snRNA methylphosphate capping enzyme OS=Homo sapiens GN=MEPCE PE=1 SV=1 0.726498 4.97469 0.00199229 107.57 77.734 71.735 1 S DEEVSRTLNAETPKSSPLPAKGRDPVEILIP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPXXXXXXXXXX T(0.011)LNAET(0.032)PKS(0.231)S(0.726)PLPAK T(-18.28)LNAET(-13.61)PKS(-4.97)S(4.97)PLPAK 10 3 0.64266 75962 0 0 117220 0 0 79528 0 0 117100 0 0 90414 0 0 72310 0 0 98817 0 0 100510 0 0 127590 0 0 22008 0 0 71892 0 0 110730 0 0 80024 0 0 119520 0 0 91255 0 0 74874 0 0 100970 0 0 100390 0 0 124680 0 0 23049 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 127860000 127860000 0 0 NaN 2358 1317 217 217 4383;4778 4670;5095 4974;5429 5519;5520;6037 5429 6037 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13730 4974 5520 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10914 4974 5520 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10914 Q7L2J0 370 Q7L2J0 Q7L2J0 7SK snRNA methylphosphate capping enzyme MEPCE sp|Q7L2J0|MEPCE_HUMAN 7SK snRNA methylphosphate capping enzyme OS=Homo sapiens GN=MEPCE PE=1 SV=1 0.793103 9.19148 0.05044 47.47 31.58 47.47 1 S PPSSSSRHRKRRRTSSKSEAGARGGGQGSKE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX T(0.096)S(0.096)S(0.793)KS(0.016)EAGAR T(-9.19)S(-9.19)S(9.19)KS(-17)EAGAR 3 2 -0.7069 8522 0 0 4550 0 0 6355.7 0 0 3751.3 0 0 4464.8 0 0 7960.9 0 0 4179.4 0 0 5595.4 0 0 5328 0 0 1207.2 0 0 8055.9 0 0 4293.7 0 0 6500.7 0 0 3968.1 0 0 4639.6 0 0 7764.3 0 0 4299.4 0 0 5740.6 0 0 5208.4 0 0 1266.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6111400 6111400 0 0 NaN 2359 1317 370 370 4959 5287 5630 6257 5630 6257 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5520 5630 6257 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5520 5630 6257 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5520 Q7L4I2 17 Q7L4I2 Q7L4I2 Arginine/serine-rich coiled-coil protein 2 RSRC2 sp|Q7L4I2|RSRC2_HUMAN Arginine/serine-rich coiled-coil protein 2 OS=Homo sapiens GN=RSRC2 PE=1 SV=1 0.96186 14.0173 3.52578E-05 130.02 95.061 130.02 1 S AASDTERDGLAPEKTSPDRDKKKEQSEVSVS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY) XXXXXXXPPPPPPPPPPPPPPXXXXXXXXXX DGLAPEKT(0.038)S(0.962)PDR DGLAPEKT(-14.02)S(14.02)PDR 9 3 -0.85689 79582 0 0 83091 0 0 78980 0 0 97186 0 0 75040 0 0 70661 0 0 67892 0 0 80092 0 0 94219 0 0 7032.3 0 0 75302 0 0 78574 0 0 79501 0 0 98501 0 0 76308 0 0 72143 0 0 70172 0 0 80184 0 0 91849 0 0 8475.4 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 126370000 126370000 0 0 NaN 2360 1318 17 17 678;679;4929 722;723;5254 770;771;5597 851;852;6220 770 851 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9903 770 851 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9903 770 851 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9903 Q7L4I2 32 Q7L4I2 Q7L4I2 Arginine/serine-rich coiled-coil protein 2 RSRC2 sp|Q7L4I2|RSRC2_HUMAN Arginine/serine-rich coiled-coil protein 2 OS=Homo sapiens GN=RSRC2 PE=1 SV=1 0.999997 55.6076 5.48445E-07 170.95 71.135 170.95 1 S SPDRDKKKEQSEVSVSPRASKHHYSRSRSRS Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX EQSEVSVS(1)PR EQS(-109.47)EVS(-55.61)VS(55.61)PR 8 2 -0.22372 66841 0 0 77352 0 0 69190 0 0 70603 0 0 62605 0 0 64810 0 0 62562 0 0 67153 0 0 88112 0 0 5764 0 0 63258 0 0 73033 0 0 69455 0 0 72812 0 0 63944 0 0 65262 0 0 64385 0 0 67442 0 0 85857 0 0 6981.7 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 415090000 415090000 0 0 NaN 2361 1318 32 32 1103;2104 1161;2225 1249;2397 1373;2672 1249 1373 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8174 1249 1373 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8174 1249 1373 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8174 Q7L4I2 104 Q7L4I2 Q7L4I2 Arginine/serine-rich coiled-coil protein 2 RSRC2 sp|Q7L4I2|RSRC2_HUMAN Arginine/serine-rich coiled-coil protein 2 OS=Homo sapiens GN=RSRC2 PE=1 SV=1 0.5 0 1.77046E-06 159.6 115.4 159.6 1 S NDKEHSSDKGRERLNSSENGEDRHKRKERKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX LNS(0.5)S(0.5)ENGEDR LNS(0)S(0)ENGEDR 3 2 -0.34966 21434 0 0 21531 0 0 21567 0 0 23415 0 0 12179 0 0 21544 0 0 11683 0 0 19066 0 0 23999 0 0 3621.3 0 0 20283 0 0 20350 0 0 21594 0 0 23896 0 0 12918 0 0 21654 0 0 12254 0 0 19329 0 0 23157 0 0 3851.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15402000 15402000 0 0 NaN 2362 1318 104 104 2487 2626 2820 3147 2820 3147 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7067 2820 3147 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7067 2820 3147 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7067 Q7L4I2 105 Q7L4I2 Q7L4I2 Arginine/serine-rich coiled-coil protein 2 RSRC2 sp|Q7L4I2|RSRC2_HUMAN Arginine/serine-rich coiled-coil protein 2 OS=Homo sapiens GN=RSRC2 PE=1 SV=1 0.5 0 1.77046E-06 159.6 115.4 159.6 1 S DKEHSSDKGRERLNSSENGEDRHKRKERKSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LNS(0.5)S(0.5)ENGEDR LNS(0)S(0)ENGEDR 4 2 -0.34966 21434 0 0 21531 0 0 21567 0 0 23415 0 0 12179 0 0 21544 0 0 11683 0 0 19066 0 0 23999 0 0 3621.3 0 0 20283 0 0 20350 0 0 21594 0 0 23896 0 0 12918 0 0 21654 0 0 12254 0 0 19329 0 0 23157 0 0 3851.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15402000 15402000 0 0 NaN 2363 1318 105 105 2487 2626 2820 3147 2820 3147 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7067 2820 3147 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7067 2820 3147 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7067 Q7L4I2 75 Q7L4I2 Q7L4I2 Arginine/serine-rich coiled-coil protein 2 RSRC2 sp|Q7L4I2|RSRC2_HUMAN Arginine/serine-rich coiled-coil protein 2 OS=Homo sapiens GN=RSRC2 PE=1 SV=1 1 65.5005 0.0140025 65.5 30.613 65.5 1 S KHRSRSRSKEGRRHESKDKSSKKHKSEEHND X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX RHES(1)KDK RHES(65.5)KDK 4 4 2.9779 18465 0 0 23581 0 0 17371 0 0 23716 0 0 21326 0 0 17830 0 0 20959 0 0 20957 0 0 24659 0 0 17148 0 0 17468 0 0 22277 0 0 17602 0 0 24248 0 0 21406 0 0 18206 0 0 21454 0 0 21417 0 0 24174 0 0 16632 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 6474600 6474600 0 0 NaN 2364 1318 75 75 3261 3459 3695 4100;4101 3695 4100 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5257 3695 4100 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5257 3695 4100 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5257 Q7L591 330 Q7L591 Q7L591 Docking protein 3 DOK3 sp|Q7L591|DOK3_HUMAN Docking protein 3 OS=Homo sapiens GN=DOK3 PE=1 SV=2 0.994379 22.4837 2.38884E-23 283.42 246.58 283.42 1 S PELTRPQPCPLPRATSLPSLDTPGELREMPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX AT(0.006)S(0.994)LPSLDTPGELR AT(-22.48)S(22.48)LPS(-51.08)LDT(-123.67)PGELR 3 2 0.32687 14669 0 0 9352.3 0 0 15642 0 0 10742 0 0 26897 0 0 14876 0 0 26641 0 0 16595 0 0 9175.8 0 0 15537 0 0 13884 0 0 8842.7 0 0 15832 0 0 11011 0 0 26611 0 0 14777 0 0 26653 0 0 17048 0 0 9794.5 0 0 15014 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 335580000 335580000 0 0 NaN 2365 1319 330 330 533 566 607 679 607 679 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18159 607 679 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18159 607 679 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18159 Q7L7X3 421 Q7L7X3 Q7L7X3 Serine/threonine-protein kinase TAO1 TAOK1 sp|Q7L7X3|TAOK1_HUMAN Serine/threonine-protein kinase TAO1 OS=Homo sapiens GN=TAOK1 PE=1 SV=1 0.999987 48.9541 3.49707E-07 156.6 115.2 156.6 1 S YREEGDPRTRASDPQSPPQVSRHKSHYRNRE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX ASDPQS(1)PPQVSR AS(-82.72)DPQS(48.95)PPQVS(-48.95)R 6 2 -0.18697 10888 0 0 10320 0 0 10399 0 0 9583.6 0 0 8954.7 0 0 11624 0 0 8849.3 0 0 10105 0 0 10426 0 0 3227.5 0 0 10301 0 0 9744.6 0 0 10482 0 0 9917.9 0 0 9172.6 0 0 11548 0 0 9056 0 0 10292 0 0 10220 0 0 3273 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8894200 8894200 0 0 NaN 2366 1320 421 421 444 473 508 569 508 569 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7526 508 569 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7526 508 569 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7526 Q7L8J4 350 Q7L8J4 Q7L8J4 SH3 domain-binding protein 5-like SH3BP5L sp|Q7L8J4|3BP5L_HUMAN SH3 domain-binding protein 5-like OS=Homo sapiens GN=SH3BP5L PE=1 SV=1 1 76.2278 0.0153967 76.228 41.473 76.228 1 S LLSLRTVASDLQKCDSVEHLRGLSDHVSLDG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX CDS(1)VEHLR CDS(76.23)VEHLR 3 2 -0.11328 21323 0 0 19483 0 0 20718 0 0 18115 0 0 19397 0 0 21874 0 0 20489 0 0 20936 0 0 18532 0 0 4263.4 0 0 20174 0 0 18397 0 0 20883 0 0 18743 0 0 19775 0 0 21753 0 0 20750 0 0 21166 0 0 18369 0 0 4499.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10528000 10528000 0 0 NaN 2367 1321 350 350 601 640 682 757 682 757 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7985 682 757 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7985 682 757 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7985 Q7LBC6 289 Q7LBC6 Q7LBC6 Lysine-specific demethylase 3B KDM3B sp|Q7LBC6|KDM3B_HUMAN Lysine-specific demethylase 3B OS=Homo sapiens GN=KDM3B PE=1 SV=2 0.999867 38.763 6.47136E-23 273.34 224.74 273.34 1 S KKRESIEGKDGRRRKSASDSGCDPASKKLKG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX S(1)ASDSGCDPASK S(38.76)AS(-38.76)DS(-69.6)GCDPAS(-182.14)K 1 2 -0.073959 75749 0 0 67490 0 0 77232 0 0 68140 0 0 56730 0 0 76631 0 0 60189 0 0 72558 0 0 78258 0 0 10951 0 0 71684 0 0 63759 0 0 77439 0 0 70060 0 0 58846 0 0 76402 0 0 61596 0 0 73269 0 0 76450 0 0 11991 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 74175000 74175000 0 0 NaN 2368 1322 289 289 3298;3602;3603 3499;3829;3830 3736;4082;4083 4150;4538;4539 4082 4538 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7573 4082 4538 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7573 4082 4538 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7573 Q7LDG7 576 Q7LDG7 Q7LDG7 RAS guanyl-releasing protein 2 RASGRP2 sp|Q7LDG7|GRP2_HUMAN RAS guanyl-releasing protein 2 OS=Homo sapiens GN=RASGRP2 PE=1 SV=1 0.999278 31.4085 0.00182175 96.059 53.848 96.059 1 S APSPSPMHSHHHRAFSFSLPRPGRRGSRPPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX AFS(0.999)FS(0.001)LPRPGR AFS(31.41)FS(-31.41)LPRPGR 3 3 -0.85885 8347.1 0 0 1877.7 0 0 8157.1 0 0 1214.1 0 0 4128.9 0 0 8520.4 0 0 3578 0 0 4641.4 0 0 1371.8 0 0 1252.1 0 0 7897.8 0 0 1770 0 0 8174.3 0 0 1404.5 0 0 4418 0 0 8168.1 0 0 3608.2 0 0 4843.7 0 0 1447.1 0 0 1286.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7209300 7209300 0 0 NaN 2369 1323 576 576 182 190 204 229 204 229 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19611 204 229 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19611 204 229 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19611 Q7RTP6 977 Q7RTP6 Q7RTP6 Protein-methionine sulfoxide oxidase MICAL3 MICAL3 sp|Q7RTP6|MICA3_HUMAN Protein-methionine sulfoxide oxidase MICAL3 OS=Homo sapiens GN=MICAL3 PE=1 SV=2 1 74.6101 8.2743E-07 138.98 113.77 138.98 1 S PWKEAVRIHALLKGKSEEELEASKSFGPGNE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX GKS(1)EEELEASK GKS(74.61)EEELEAS(-74.61)K 3 3 -0.35368 22181 0 0 16736 0 0 20284 0 0 17055 0 0 17450 0 0 20098 0 0 18652 0 0 18723 0 0 16921 0 0 9595 0 0 20982 0 0 15812 0 0 20502 0 0 17541 0 0 17891 0 0 20011 0 0 18881 0 0 19123 0 0 16769 0 0 9468.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27968000 27968000 0 0 NaN 2370 1324 977 977 1490 1568 1693 1874 1693 1874 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11117 1693 1874 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11117 1693 1874 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11117 Q7RTP6 1310 Q7RTP6 Q7RTP6 Protein-methionine sulfoxide oxidase MICAL3 MICAL3 sp|Q7RTP6|MICA3_HUMAN Protein-methionine sulfoxide oxidase MICAL3 OS=Homo sapiens GN=MICAL3 PE=1 SV=2 1 121.446 5.65221E-12 211.77 166.64 121.45 1 S PLPVQSQSDTKDRLGSPLAVDEALRRSDLVE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX LGS(1)PLAVDEALRR LGS(121.45)PLAVDEALRR 3 3 -0.34552 15743 0 0 19902 0 0 16173 0 0 21850 0 0 16775 0 0 16279 0 0 18769 0 0 17752 0 0 20368 0 0 35952 0 0 14898 0 0 18812 0 0 16272 0 0 22227 0 0 17018 0 0 16652 0 0 19053 0 0 18832 0 0 20029 0 0 34264 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 19781000 19781000 0 0 NaN 2371 1324 1310 1310 2385;2386 2522;2523 2715;2716 3033;3034 2716 3034 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18105 2715 3033 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20286 2715 3033 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20286 Q7RTP6 685 Q7RTP6 Q7RTP6 Protein-methionine sulfoxide oxidase MICAL3 MICAL3 sp|Q7RTP6|MICA3_HUMAN Protein-methionine sulfoxide oxidase MICAL3 OS=Homo sapiens GN=MICAL3 PE=1 SV=2 0.746233 4.80514 8.12168E-07 147.1 125.44 147.1 1 S KKEKDLDGAGKRRKTSQSEEEEAPRGHRGER X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX RKT(0.247)S(0.746)QS(0.007)EEEEAPR RKT(-4.81)S(4.81)QS(-20.3)EEEEAPR 4 3 0.70532 8293.4 0 0 6982.3 0 0 8325.5 0 0 6504 0 0 7573.2 0 0 7330.9 0 0 6454 0 0 8464.9 0 0 8718.6 0 0 1311.5 0 0 7847.8 0 0 6593.2 0 0 8370.1 0 0 6720.6 0 0 7716 0 0 7327.9 0 0 6685.4 0 0 8486.5 0 0 8506.6 0 0 1430.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13730000 13730000 0 0 NaN 2372 1324 685 685 3307 3508 3745 4161 3745 4161 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5688 3745 4161 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5688 3745 4161 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5688 Q7RTP6 1704 Q7RTP6 Q7RTP6 Protein-methionine sulfoxide oxidase MICAL3 MICAL3 sp|Q7RTP6|MICA3_HUMAN Protein-methionine sulfoxide oxidase MICAL3 OS=Homo sapiens GN=MICAL3 PE=1 SV=2 0.99823 28.6591 0.0191086 72.638 20.689 72.638 1 S SEGSSGKSKKRSSLFSPRRNKKEKKSKGEGR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX SS(0.001)LFS(0.998)PR S(-33.86)S(-28.66)LFS(28.66)PR 5 2 -0.002579 9755 0 0 9096.9 0 0 9784 0 0 9476 0 0 7169.2 0 0 9450.9 0 0 7191.9 0 0 8208 0 0 9349.5 0 0 2696.7 0 0 9230.9 0 0 8595.7 0 0 9818.3 0 0 9706.1 0 0 7432.1 0 0 9463.8 0 0 7378.7 0 0 8362.7 0 0 9133.7 0 0 2729.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11798000 11798000 0 0 NaN 2373 1324 1704 1704 4364 4648 4952 5497 4952 5497 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15254 4952 5497 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15254 4952 5497 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15254 Q7Z2E3 132 Q7Z2E3 Q7Z2E3 Aprataxin APTX sp|Q7Z2E3|APTX_HUMAN Aprataxin OS=Homo sapiens GN=APTX PE=1 SV=2 0.993893 22.5529 0.00504874 91.932 33.816 91.932 1 S EAKNPGLETHRKRKRSGNSDSIERDAAQEAE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX KRS(0.994)GNS(0.006)DS(0.001)IER KRS(22.55)GNS(-22.55)DS(-32.3)IER 3 3 -0.70798 10282 0 0 13914 0 0 10950 0 0 10530 0 0 9124.7 0 0 11345 0 0 10891 0 0 10885 0 0 12951 0 0 1934.4 0 0 9731.8 0 0 13125 0 0 10969 0 0 11032 0 0 9394.5 0 0 11333 0 0 11058 0 0 10995 0 0 12691 0 0 2073.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 42690000 42690000 0 0 NaN 2374 1325 132 132 2200 2326 2507 2798 2507 2798 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5751 2507 2798 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5751 2507 2798 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5751 Q7Z2K6 53 Q7Z2K6 Q7Z2K6 Endoplasmic reticulum metallopeptidase 1 ERMP1 sp|Q7Z2K6|ERMP1_HUMAN Endoplasmic reticulum metallopeptidase 1 OS=Homo sapiens GN=ERMP1 PE=1 SV=2 0.99998 50.0921 0.015437 72.523 55.806 72.523 1 S PLVDGCSGGGRTRKRSPGGSGGASRGAGTGL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX KRS(1)PGGSGGASR KRS(50.09)PGGS(-50.09)GGAS(-50.09)R 3 3 -0.20989 9941.7 0 0 8524.9 0 0 10435 0 0 7265.1 0 0 9514 0 0 9400.1 0 0 10026 0 0 9814.8 0 0 9723.5 0 0 1940 0 0 9409.2 0 0 8046 0 0 10469 0 0 7570.8 0 0 9716.2 0 0 9335.8 0 0 10173 0 0 9887.3 0 0 9607 0 0 2053.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25259000 25259000 0 0 NaN 2375 1326 53 53 2202 2328 2509 2800 2509 2800 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4853 2509 2800 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4853 2509 2800 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4853 Q7Z2K8 615 Q7Z2K8 Q7Z2K8 G protein-regulated inducer of neurite outgrowth 1 GPRIN1 sp|Q7Z2K8|GRIN1_HUMAN G protein-regulated inducer of neurite outgrowth 1 OS=Homo sapiens GN=GPRIN1 PE=2 SV=2 0.985213 18.6832 0.000129029 101.75 77.706 101.75 1 S AIPEGKVGSLPLEKGSPVTTTKADPRASGKA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPXXXXXXXXX VGSLPLEKGS(0.985)PVT(0.013)T(0.001)TK VGS(-63.01)LPLEKGS(18.68)PVT(-18.68)T(-29.58)T(-34.38)K 10 3 0.41603 10701 0 0 25090 0 0 11936 0 0 25120 0 0 4981 0 0 11895 0 0 4465.9 0 0 14647 0 0 28864 0 0 13462 0 0 10130 0 0 23702 0 0 11862 0 0 25578 0 0 5481.1 0 0 12573 0 0 5238.7 0 0 14991 0 0 27446 0 0 13015 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18691000 18691000 0 0 NaN 2376 1327 615 615 5121 5458 5814 6465 5814 6465 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17088 5814 6465 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17088 5814 6465 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17088 Q7Z2W4 310 Q7Z2W4 Q7Z2W4 Zinc finger CCCH-type antiviral protein 1 ZC3HAV1 sp|Q7Z2W4|ZCCHV_HUMAN Zinc finger CCCH-type antiviral protein 1 OS=Homo sapiens GN=ZC3HAV1 PE=1 SV=3 0.999033 31.5387 0.00813971 75.088 60.223 75.088 1 S RKFTYLGSQDRARPPSGSSKATDLGGTSQAG X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX ARPPS(0.999)GS(0.001)SK ARPPS(31.54)GS(-31.54)S(-35.75)K 5 3 -0.15276 12881 0 0 13768 0 0 14335 0 0 15416 0 0 13453 0 0 13233 0 0 13305 0 0 13075 0 0 16263 0 0 3566.5 0 0 12195 0 0 13015 0 0 14340 0 0 15693 0 0 13705 0 0 13366 0 0 13631 0 0 13229 0 0 15922 0 0 3660.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9353800 9353800 0 0 NaN 2377 1328 310 310 424 453 488 544 488 544 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6272 488 544 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6272 488 544 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6272 Q7Z2W4 284 Q7Z2W4 Q7Z2W4 Zinc finger CCCH-type antiviral protein 1 ZC3HAV1 sp|Q7Z2W4|ZCCHV_HUMAN Zinc finger CCCH-type antiviral protein 1 OS=Homo sapiens GN=ZC3HAV1 PE=1 SV=3 1 98.1194 9.69628E-05 126.09 82.778 126.09 1 S ERSCTPSPDQISHRASLEDAPVDDLTRKFTY X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPXXXX AS(1)LEDAPVDDLTR AS(98.12)LEDAPVDDLT(-98.12)R 2 2 0.77084 12649 0 0 11637 0 0 11884 0 0 12788 0 0 22552 0 0 11152 0 0 24162 0 0 18630 0 0 13234 0 0 28316 0 0 11966 0 0 10999 0 0 12145 0 0 13034 0 0 22269 0 0 11398 0 0 24219 0 0 19250 0 0 13522 0 0 27094 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24680000 24680000 0 0 NaN 2378 1328 284 284 469 499 536 600 536 600 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17086 536 600 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17086 536 600 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17086 Q7Z2W4 257 Q7Z2W4 Q7Z2W4 Zinc finger CCCH-type antiviral protein 1 ZC3HAV1 sp|Q7Z2W4|ZCCHV_HUMAN Zinc finger CCCH-type antiviral protein 1 OS=Homo sapiens GN=ZC3HAV1 PE=1 SV=3 1 72.1384 3.61941E-05 119.34 95.543 119.34 1 S AYRARSKSRDRFFQGSQEFLASASASAERSC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPXX FFQGS(1)QEFLASASASAER FFQGS(72.14)QEFLAS(-72.14)AS(-84.62)AS(-96.01)AER 5 3 -0.046083 6965.6 0 0 7347.5 0 0 5940.6 0 0 6737.5 0 0 7190.7 0 0 6654.2 0 0 7166.4 0 0 7561.3 0 0 8264.7 0 0 38647 0 0 6587.4 0 0 6937.5 0 0 6056 0 0 6953.8 0 0 7224 0 0 6757.7 0 0 7326 0 0 8713.8 0 0 8108.2 0 0 36565 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 50664000 50664000 0 0 NaN 2379 1328 257 257 1260 1325 1426 1581;1582 1426 1581 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21294 1426 1581 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21294 1426 1581 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21294 Q7Z2W4 263 Q7Z2W4 Q7Z2W4 Zinc finger CCCH-type antiviral protein 1 ZC3HAV1 sp|Q7Z2W4|ZCCHV_HUMAN Zinc finger CCCH-type antiviral protein 1 OS=Homo sapiens GN=ZC3HAV1 PE=1 SV=3 0.749992 5.67494 0.027658 66.553 51.859 66.553 1 S KSRDRFFQGSQEFLASASASAERSCTPSPDQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X XXXXXPPPPPPPPPPPPPPPPPPXXXXXXXX FFQGS(0.203)QEFLAS(0.75)AS(0.041)AS(0.006)AER FFQGS(-5.67)QEFLAS(5.67)AS(-12.67)AS(-20.66)AER 11 3 1.9845 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2380 1328 263 263 1260 1325 1427 1583 1427 1583 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21790 1427 1583 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21790 1427 1583 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21790 Q7Z2W4 302 Q7Z2W4 Q7Z2W4 Zinc finger CCCH-type antiviral protein 1 ZC3HAV1 sp|Q7Z2W4|ZCCHV_HUMAN Zinc finger CCCH-type antiviral protein 1 OS=Homo sapiens GN=ZC3HAV1 PE=1 SV=3 0.999869 38.8618 0.00517698 87.566 53.68 87.566 1 S DAPVDDLTRKFTYLGSQDRARPPSGSSKATD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX KFTYLGS(1)QDR KFT(-38.86)Y(-58.5)LGS(38.86)QDR 7 3 0.93639 7882.8 0 0 8201.4 0 0 7965.1 0 0 10055 0 0 17395 0 0 8380.2 0 0 17681 0 0 12889 0 0 8074.3 0 0 2268.7 0 0 7459.4 0 0 7758.1 0 0 8131.7 0 0 10184 0 0 17091 0 0 8535.5 0 0 17720 0 0 12822 0 0 8374.4 0 0 2434.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13893000 13893000 0 0 NaN 2381 1328 302 302 2060 2179 2347 2614 2347 2614 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14392 2347 2614 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14392 2347 2614 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14392 Q7Z2W4 275 Q7Z2W4 Q7Z2W4 Zinc finger CCCH-type antiviral protein 1 ZC3HAV1 sp|Q7Z2W4|ZCCHV_HUMAN Zinc finger CCCH-type antiviral protein 1 OS=Homo sapiens GN=ZC3HAV1 PE=1 SV=3 0.970799 14.596 0.00864039 75.463 55.356 54.281 1;2 S FLASASASAERSCTPSPDQISHRASLEDAPV X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX S(0.161)CT(0.868)PS(0.971)PDQISHR S(-8.03)CT(8.03)PS(14.6)PDQIS(-41.4)HR 5 3 0.29476 16296 26231 0 16938 6811.4 0 15861 26078 0 16540 9234.5 0 17119 8606.5 0 18203 25005 0 14788 6514.1 0 17043 15099 0 16969 6523.8 0 4528.6 2627 0 15419 24821 0 15999 6448.3 0 16007 26050 0 17033 9587.2 0 17268 9736 0 18165 24241 0 15224 6731.5 0 17277 15609 0 16650 6436.6 0 4658.7 2823.1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 52283000 36869000 15415000 0 NaN 2382 1328 275 275 3651 3881;3882 4135;4136 4594;4595 4135 4594 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7574 4136 4595 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7876 4136 4595 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7876 Q7Z2W4 387 Q7Z2W4 Q7Z2W4 Zinc finger CCCH-type antiviral protein 1 ZC3HAV1 sp|Q7Z2W4|ZCCHV_HUMAN Zinc finger CCCH-type antiviral protein 1 OS=Homo sapiens GN=ZC3HAV1 PE=1 SV=3 0.638012 2.46752 1.75521E-15 213.55 175.11 213.55 1 S RRKTVFSPTLPAARSSLGSLQTPEAVTTRKG X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPXX S(0.361)S(0.638)LGS(0.001)LQTPEAVTTR S(-2.47)S(2.47)LGS(-30.94)LQT(-86.25)PEAVT(-140.31)T(-151.51)R 2 2 0.52371 11290 0 0 14192 0 0 11823 0 0 13486 0 0 12482 0 0 12619 0 0 12580 0 0 13197 0 0 14137 0 0 21484 0 0 10686 0 0 13402 0 0 11883 0 0 13876 0 0 12631 0 0 12735 0 0 12843 0 0 13863 0 0 13883 0 0 20535 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 45071000 45071000 0 0 NaN 2383 1328 387 387 4365 4649 4953 5498 4953 5498 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15153 4953 5498 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15153 4953 5498 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15153 Q7Z2W4 378 Q7Z2W4 Q7Z2W4 Zinc finger CCCH-type antiviral protein 1 ZC3HAV1 sp|Q7Z2W4|ZCCHV_HUMAN Zinc finger CCCH-type antiviral protein 1 OS=Homo sapiens GN=ZC3HAV1 PE=1 SV=3 0.994699 25.1138 1.66859E-07 171.62 126.25 171.62 1 S TSWTNDQGARRKTVFSPTLPAARSSLGSLQT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX T(0.002)VFS(0.995)PT(0.003)LPAAR T(-26.48)VFS(25.11)PT(-25.11)LPAAR 4 2 1.0303 21874 0 0 13315 0 0 22219 0 0 13576 0 0 13956 0 0 22950 0 0 14802 0 0 17314 0 0 14235 0 0 12721 0 0 20699 0 0 12580 0 0 22254 0 0 14074 0 0 14662 0 0 22539 0 0 15011 0 0 17969 0 0 14069 0 0 12379 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 125150000 125150000 0 0 NaN 2384 1328 378 378 5005 5335 5685 6315 5685 6315 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17907 5685 6315 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17907 5685 6315 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17907 Q7Z309 58 Q7Z309 Q7Z309 Protein FAM122B FAM122B sp|Q7Z309|F122B_HUMAN Protein FAM122B OS=Homo sapiens GN=FAM122B PE=1 SV=2 1 132.081 2.72527E-05 132.08 105.37 132.08 1 S TLRTRRNSTTIMSRHSLEEGLDMVNRETAHE X;X;X;X;X;X;X;Phospho (STY);X;X;X;Oxidation (M);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPXXXXX HS(1)LEEGLDMVNR HS(132.08)LEEGLDMVNR 2 3 0.80193 5573.5 0 0 5808.1 0 0 7399.9 0 0 5542.9 0 0 5690 0 0 6856.4 0 0 5466.6 0 0 6146.7 0 0 6572.7 0 0 2904.4 0 0 5280.8 0 0 5485.2 0 0 7324.9 0 0 5728.5 0 0 5873.1 0 0 6810.5 0 0 5605.6 0 0 6280.6 0 0 6438.3 0 0 2877.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7851400 7851400 0 0 NaN 2385 1329 58 58 1747 1843 1989 2217 1989 2217 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15358 1989 2217 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15358 1989 2217 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15358 Q7Z309 115 Q7Z309 Q7Z309 Protein FAM122B FAM122B sp|Q7Z309|F122B_HUMAN Protein FAM122B OS=Homo sapiens GN=FAM122B PE=1 SV=2 0.999721 35.8859 5.49096E-07 154.07 130.97 154.07 1;2 S PEKLYSPKRIDFTPVSPAPSPTRGFGKMFVS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPXXXXXXXX RIDFTPVS(1)PAPSPTR RIDFT(-35.89)PVS(35.89)PAPS(-46.74)PT(-68.58)R 8 3 0.11499 5761.7 11361 0 6303.2 12481 0 5548.4 13020 0 6314.8 13121 0 6373.1 13874 0 5820 11984 0 7211.1 12588 0 6260.4 12707 0 6020.8 13208 0 3995.8 12981 0 5451.2 10757 0 5954.5 11794 0 5610.9 13023 0 6475.1 13415 0 6429.5 14011 0 5868.8 12096 0 7267.4 12892 0 6382.9 13109 0 5991.2 13006 0 3907.4 12517 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 37055000 14560000 22496000 0 NaN 2386 1329 115 115 3271 3470;3471 3707;3708 4117;4118;4119 3707 4117 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14900 3707 4117 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14900 3707 4117 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14900 Q7Z309 119 Q7Z309 Q7Z309 Protein FAM122B FAM122B sp|Q7Z309|F122B_HUMAN Protein FAM122B OS=Homo sapiens GN=FAM122B PE=1 SV=2 0.500105 0 0.00394052 89.721 70.114 89.721 2 S YSPKRIDFTPVSPAPSPTRGFGKMFVSSSGL X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX RIDFT(0.005)PVS(0.995)PAPS(0.5)PT(0.5)R RIDFT(-22.87)PVS(22.87)PAPS(0)PT(0)R 12 3 -0.11979 0 11361 0 0 12481 0 0 13020 0 0 13121 0 0 13874 0 0 11984 0 0 12588 0 0 12707 0 0 13208 0 0 12981 0 0 10757 0 0 11794 0 0 13023 0 0 13415 0 0 14011 0 0 12096 0 0 12892 0 0 13109 0 0 13006 0 0 12517 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 22496000 0 22496000 0 NaN 2387 1329 119 119 3271 3470;3471 3708 4118;4119 3708 4118 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15883 3708 4118 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15883 3708 4118 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15883 Q7Z309 50 Q7Z309 Q7Z309 Protein FAM122B FAM122B sp|Q7Z309|F122B_HUMAN Protein FAM122B OS=Homo sapiens GN=FAM122B PE=1 SV=2 0.561266 4.11973 0.0484836 44.847 11.79 44.847 1 S LSQVFQPYTLRTRRNSTTIMSRHSLEEGLDM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Oxidation (M);X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX RNS(0.561)T(0.217)T(0.217)IMS(0.004)R RNS(4.12)T(-4.12)T(-4.12)IMS(-21.47)R 3 2 0.46407 1863.9 0 0 2467.8 0 0 2232.7 0 0 1761.9 0 0 2570.6 0 0 2263.4 0 0 2031.2 0 0 1990.9 0 0 1678.9 0 0 1564.1 0 0 1765.1 0 0 2327.3 0 0 2230.1 0 0 1860.2 0 0 2580.8 0 0 2245.8 0 0 2083.8 0 0 2054.7 0 0 1671.5 0 0 1518.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 2569200 2569200 0 0 NaN 2388 1329 50 50 3369 3576 3815 4237 3815 4237 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5261 3815 4237 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5261 3815 4237 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5261 Q7Z309 151 Q7Z309 Q7Z309 Protein FAM122B FAM122B sp|Q7Z309|F122B_HUMAN Protein FAM122B OS=Homo sapiens GN=FAM122B PE=1 SV=2 0.998422 28.012 0.0136897 71.524 35.616 71.524 1 S PSPVPSPRRFSRRSQSPVKCIRPSVLGPLKR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX RS(0.002)QS(0.998)PVK RS(-28.01)QS(28.01)PVK 4 3 0.10101 16274 0 0 16758 0 0 15540 0 0 16323 0 0 15741 0 0 15274 0 0 15980 0 0 16076 0 0 16967 0 0 2304.6 0 0 15397 0 0 15829 0 0 15693 0 0 16770 0 0 15967 0 0 15371 0 0 16282 0 0 16164 0 0 16700 0 0 2542.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23543000 23543000 0 0 NaN 2389 1329 151 151 3490 3707 3953 4391 3953 4391 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5906 3953 4391 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5906 3953 4391 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5906 Q7Z309 25 Q7Z309 Q7Z309 Protein FAM122B FAM122B sp|Q7Z309|F122B_HUMAN Protein FAM122B OS=Homo sapiens GN=FAM122B PE=1 SV=2 0.9767 16.914 1.79368E-54 383.36 366.21 383.36 1 S LEPDTSYGGTLRRSSSAPLIHGLSDLSQVFQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.003)S(0.02)S(0.977)APLIHGLSDLSQVFQPYTLR S(-24.55)S(-16.91)S(16.91)APLIHGLS(-135.62)DLS(-189.14)QVFQPY(-291.72)T(-296.61)LR 3 3 -0.90483 19032 0 0 27177 0 0 23232 0 0 25686 0 0 21675 0 0 29248 0 0 37721 0 0 37558 0 0 29228 0 0 149630 0 0 18025 0 0 25664 0 0 23163 0 0 26522 0 0 22307 0 0 29543 0 0 37394 0 0 41860 0 0 29200 0 0 141760 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 109560000 109560000 0 0 NaN 2390 1329 25 25 4415 4703 5007 5555 5007 5555 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23935 5007 5555 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23935 5007 5555 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23935 Q7Z3B3 1082 Q7Z3B3 Q7Z3B3 KAT8 regulatory NSL complex subunit 1 KANSL1 sp|Q7Z3B3|KANL1_HUMAN KAT8 regulatory NSL complex subunit 1 OS=Homo sapiens GN=KANSL1 PE=1 SV=2 0.864499 8.05038 6.90025E-05 123.36 85.812 123.36 1 S TSGSKTGRETEAAPTSPPIVPLKSRHLVAAA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPXXXXXXXX ETEAAPT(0.135)S(0.864)PPIVPLK ET(-41.11)EAAPT(-8.05)S(8.05)PPIVPLK 8 3 0.60066 9356.3 0 0 10327 0 0 8178.1 0 0 9951.6 0 0 10099 0 0 8931.1 0 0 8141.5 0 0 8741.6 0 0 12152 0 0 6852.7 0 0 8849 0 0 9753.8 0 0 8322.4 0 0 10225 0 0 10112 0 0 9008.2 0 0 8491.2 0 0 8982.3 0 0 11820 0 0 6654.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19294000 19294000 0 0 NaN 2391 1330 1082 1082 1179 1240 1338 1482 1338 1482 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18304 1338 1482 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18304 1338 1482 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18304 Q7Z3B3 268 Q7Z3B3 Q7Z3B3 KAT8 regulatory NSL complex subunit 1 KANSL1 sp|Q7Z3B3|KANL1_HUMAN KAT8 regulatory NSL complex subunit 1 OS=Homo sapiens GN=KANSL1 PE=1 SV=2 0.994794 24.1296 0.0153795 65.213 52.013 65.213 1 S DSSSNLGGVKLEGKKSPLSSILFSALDSDTR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP KS(0.995)PLS(0.004)S(0.001)ILFSALDSDTR KS(24.13)PLS(-24.13)S(-28.73)ILFS(-46.68)ALDS(-50.96)DT(-60.41)R 2 3 0.91696 8660.4 0 0 10203 0 0 8250.2 0 0 9412.1 0 0 8021.5 0 0 6517.7 0 0 9556.8 0 0 10002 0 0 10671 0 0 54669 0 0 8193.4 0 0 9633.5 0 0 8331.1 0 0 9665.8 0 0 8176.5 0 0 6808.9 0 0 9684.8 0 0 11545 0 0 10482 0 0 51709 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 36862000 36862000 0 0 NaN 2392 1330 268 268 2220;4131 2346;4404 2527 2822 2527 2822 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23787 2527 2822 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23787 2527 2822 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23787 Q7Z3B3 271 Q7Z3B3 Q7Z3B3 KAT8 regulatory NSL complex subunit 1 KANSL1 sp|Q7Z3B3|KANL1_HUMAN KAT8 regulatory NSL complex subunit 1 OS=Homo sapiens GN=KANSL1 PE=1 SV=2 0.346821 0 0.0501758 43.454 28.764 43.454 S SNLGGVKLEGKKSPLSSILFSALDSDTRITA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPXXX S(0.306)PLS(0.347)S(0.347)ILFSALDSDTR S(-0.54)PLS(0)S(0)ILFS(-34.36)ALDS(-41.63)DT(-43.36)R 4 3 1.9775 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2393 1330 271 271 2220;4131 2346;4404 4695 5211 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24260 4695 5211 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24260 4695 5211 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24260 Q7Z3B3 272 Q7Z3B3 Q7Z3B3 KAT8 regulatory NSL complex subunit 1 KANSL1 sp|Q7Z3B3|KANL1_HUMAN KAT8 regulatory NSL complex subunit 1 OS=Homo sapiens GN=KANSL1 PE=1 SV=2 0.346821 0 0.0501758 43.454 28.764 43.454 S NLGGVKLEGKKSPLSSILFSALDSDTRITAL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.306)PLS(0.347)S(0.347)ILFSALDSDTR S(-0.54)PLS(0)S(0)ILFS(-34.36)ALDS(-41.63)DT(-43.36)R 5 3 1.9775 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2394 1330 272 272 2220;4131 2346;4404 4695 5211 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24260 4695 5211 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24260 4695 5211 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24260 Q7Z3B3 249 Q7Z3B3 Q7Z3B3 KAT8 regulatory NSL complex subunit 1 KANSL1 sp|Q7Z3B3|KANL1_HUMAN KAT8 regulatory NSL complex subunit 1 OS=Homo sapiens GN=KANSL1 PE=1 SV=2 0.993791 22.1362 1.20142E-08 175.7 112.9 175.7 1 S VNSMEQPALQGSSRLSPGTDSSSNLGGVKLE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPXX LS(0.994)PGT(0.006)DSSSNLGGVK LS(22.14)PGT(-22.14)DS(-40.55)S(-44.89)S(-49.23)NLGGVK 2 2 -0.37085 13377 0 0 13461 0 0 13518 0 0 13760 0 0 12390 0 0 14107 0 0 12118 0 0 12371 0 0 16493 0 0 14099 0 0 12658 0 0 12717 0 0 13589 0 0 14116 0 0 12640 0 0 14129 0 0 12468 0 0 12901 0 0 16088 0 0 13562 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22403000 22403000 0 0 NaN 2395 1330 249 249 2573 2717 2915 3249 2915 3249 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15086 2915 3249 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15086 2915 3249 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15086 Q7Z3B3 1045 Q7Z3B3 Q7Z3B3 KAT8 regulatory NSL complex subunit 1 KANSL1 sp|Q7Z3B3|KANL1_HUMAN KAT8 regulatory NSL complex subunit 1 OS=Homo sapiens GN=KANSL1 PE=1 SV=2 1 64.7393 7.99343E-32 304.86 285.17 304.86 1 S QSVQPWERRTFPLAHSPQAECEDQLDAQERA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPPPX TFPLAHS(1)PQAECEDQLDAQER T(-64.74)FPLAHS(64.74)PQAECEDQLDAQER 7 3 0.085914 6414.1 0 0 7339.8 0 0 6521.7 0 0 7672.5 0 0 6877 0 0 8005.4 0 0 6639 0 0 8119.1 0 0 8023.3 0 0 22524 0 0 6069.8 0 0 6935.6 0 0 6564.7 0 0 7862.9 0 0 6955.7 0 0 8053.2 0 0 6807.2 0 0 8818.3 0 0 7857.9 0 0 21397 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 31440000 31440000 0 0 NaN 2396 1330 1045 1045 4709 5020 5347 5942 5347 5942 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15260 5347 5942 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15260 5347 5942 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15260 Q7Z3C6 761 Q7Z3C6 Q7Z3C6 Autophagy-related protein 9A ATG9A sp|Q7Z3C6|ATG9A_HUMAN Autophagy-related protein 9A OS=Homo sapiens GN=ATG9A PE=1 SV=3 0.980591 17.0349 1.29122E-17 223.86 185.66 223.86 1 S GGEGARAPQSIPRSASYPCAAPRPGAPETTA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.019)AS(0.981)YPCAAPRPGAPETTALHGGFQR S(-17.03)AS(17.03)Y(-92.86)PCAAPRPGAPET(-75.64)T(-82.74)ALHGGFQR 3 4 -0.93709 36582 0 0 35443 0 0 40088 0 0 31542 0 0 42963 0 0 43792 0 0 48062 0 0 44687 0 0 34663 0 0 15233 0 0 34629 0 0 33459 0 0 40210 0 0 32822 0 0 43489 0 0 43388 0 0 48311 0 0 45248 0 0 34770 0 0 15378 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 56735000 56735000 0 0 NaN 2397 1331 761 761 3629;3630 3858;3859 4111;4112 4568;4569 4112 4569 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12966 4112 4569 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12966 4112 4569 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12966 Q7Z3C6 656 Q7Z3C6 Q7Z3C6 Autophagy-related protein 9A ATG9A sp|Q7Z3C6|ATG9A_HUMAN Autophagy-related protein 9A OS=Homo sapiens GN=ATG9A PE=1 SV=3 0.811481 6.33924 0.0133912 64.275 37.563 64.275 1 S GSRHRAEVASALRSFSPLQPGQAPTGRAHST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX S(0.189)FS(0.811)PLQPGQAPTGR S(-6.34)FS(6.34)PLQPGQAPT(-60.03)GR 3 3 0.55302 7043.9 0 0 8100.4 0 0 7935 0 0 7321.6 0 0 6532.1 0 0 7330.5 0 0 7488.6 0 0 8065.2 0 0 7798.7 0 0 2188.4 0 0 6668.7 0 0 7647.8 0 0 7923.5 0 0 7565.3 0 0 6725.4 0 0 7360.7 0 0 7585.3 0 0 8127.4 0 0 7681.8 0 0 2247.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7416900 7416900 0 0 NaN 2398 1331 656 656 3761 4001 4266 4741 4266 4741 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14777 4266 4741 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14777 4266 4741 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14777 Q7Z3K3 746 Q7Z3K3 Q7Z3K3 Pogo transposable element with ZNF domain POGZ sp|Q7Z3K3|POGZ_HUMAN Pogo transposable element with ZNF domain OS=Homo sapiens GN=POGZ PE=1 SV=2 1 76.2819 0.011769 76.282 45.712 76.282 1 S PPVQRSIQKRAVRKMSVMGRQTCLECSFEIP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX KMS(1)VMGR KMS(76.28)VMGR 3 3 -0.83881 34752 0 0 9872.6 0 0 36002 0 0 9662.2 0 0 20451 0 0 33872 0 0 20353 0 0 21727 0 0 9081.3 0 0 1925.5 0 0 32889 0 0 9325.1 0 0 35990 0 0 10323 0 0 21660 0 0 32723 0 0 20414 0 0 22322 0 0 9438.6 0 0 2315.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16113000 16113000 0 0 NaN 2399 1332 746 746 2142 2264 2438 2715 2438 2715 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11141 2438 2715 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11141 2438 2715 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11141 Q7Z3K3 1338 Q7Z3K3 Q7Z3K3 Pogo transposable element with ZNF domain POGZ sp|Q7Z3K3|POGZ_HUMAN Pogo transposable element with ZNF domain OS=Homo sapiens GN=POGZ PE=1 SV=2 0.82096 6.61372 1.42407E-07 143.32 121.65 143.32 1 S FLVASVLPGPDGNINSPTRNADMQEELIASL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX SFLVASVLPGPDGNINS(0.821)PT(0.179)R S(-118.97)FLVAS(-96.04)VLPGPDGNINS(6.61)PT(-6.61)R 17 3 0.14953 11835 0 0 11345 0 0 12087 0 0 14125 0 0 9385.3 0 0 12520 0 0 11665 0 0 13043 0 0 14398 0 0 43833 0 0 11200 0 0 10733 0 0 12127 0 0 14307 0 0 9718.6 0 0 12710 0 0 11840 0 0 14384 0 0 14091 0 0 41576 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 140940000 140940000 0 0 NaN 2400 1332 1338 1338 3749 3989 4253 4728 4253 4728 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23324 4253 4728 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23324 4253 4728 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23324 Q7Z3K3 425 Q7Z3K3 Q7Z3K3 Pogo transposable element with ZNF domain POGZ sp|Q7Z3K3|POGZ_HUMAN Pogo transposable element with ZNF domain OS=Homo sapiens GN=POGZ PE=1 SV=2 0.999991 50.5229 2.89131E-11 197.28 160.48 197.28 1 S SLDSEPSVPSAAKPPSPEKTAPVASTPSSTP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX SLDSEPSVPSAAKPPS(1)PEK S(-138.77)LDS(-97.32)EPS(-68.9)VPS(-50.52)AAKPPS(50.52)PEK 16 3 -0.018424 19487 0 0 13467 0 0 20901 0 0 13389 0 0 17481 0 0 20977 0 0 19686 0 0 18554 0 0 14624 0 0 13608 0 0 18445 0 0 12721 0 0 20927 0 0 13874 0 0 17968 0 0 20683 0 0 19794 0 0 19115 0 0 14645 0 0 13243 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 117270000 117270000 0 0 NaN 2401 1332 425 425 3925 4184 4466 4965 4466 4965 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14206 4466 4965 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14206 4466 4965 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14206 Q7Z401 1015 Q7Z401 Q7Z401 C-myc promoter-binding protein DENND4A sp|Q7Z401|MYCPP_HUMAN C-myc promoter-binding protein OS=Homo sapiens GN=DENND4A PE=1 SV=2 0.967896 14.7927 5.95588E-16 222.46 191.92 222.46 1 S ETRNIQSRCFRKRHKSDNETNLQQQVVWGNR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP HKS(0.968)DNET(0.032)NLQQQVVWGNR HKS(14.79)DNET(-14.79)NLQQQVVWGNR 3 3 0.21528 14214 0 0 10164 0 0 15146 0 0 9932.2 0 0 9935.3 0 0 15141 0 0 10589 0 0 12258 0 0 11284 0 0 33652 0 0 13453 0 0 9599.8 0 0 15135 0 0 10296 0 0 10400 0 0 14971 0 0 10766 0 0 13421 0 0 11105 0 0 31971 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21840000 21840000 0 0 NaN 2402 1333 1015 1015 1722 1816 1961 2186 1961 2186 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13108 1961 2186 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13108 1961 2186 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13108 Q7Z401 1151 Q7Z401 Q7Z401 C-myc promoter-binding protein DENND4A sp|Q7Z401|MYCPP_HUMAN C-myc promoter-binding protein OS=Homo sapiens GN=DENND4A PE=1 SV=2 0.969679 15.1235 0.000148199 101.92 83.785 101.92 1 S GCVATQNPKRIQRMNSSFSVKPFEKTDVATG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX MNS(0.97)S(0.03)FS(0.001)VKPFEK MNS(15.12)S(-15.12)FS(-32.73)VKPFEK 3 3 -0.14331 24962 0 0 10064 0 0 25410 0 0 10327 0 0 12354 0 0 26268 0 0 15424 0 0 17085 0 0 10742 0 0 9931.5 0 0 23622 0 0 9509 0 0 25407 0 0 10844 0 0 13347 0 0 25522 0 0 15424 0 0 17792 0 0 10798 0 0 9747.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23297000 23297000 0 0 NaN 2403 1333 1151 1151 2719 2885 3094 3441 3094 3441 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19140 3094 3441 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19140 3094 3441 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19140 Q7Z401 1035 Q7Z401 Q7Z401 C-myc promoter-binding protein DENND4A sp|Q7Z401|MYCPP_HUMAN C-myc promoter-binding protein OS=Homo sapiens GN=DENND4A PE=1 SV=2 1 145.426 7.24395E-07 145.43 129.8 145.43 1 S NLQQQVVWGNRNRNLSGGVLMGFMLNRINQE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX NLS(1)GGVLMGFMLNR NLS(145.43)GGVLMGFMLNR 3 3 0.22473 1940.9 0 0 2312.4 0 0 2824.6 0 0 2735.7 0 0 2213.6 0 0 1744.1 0 0 1290.8 0 0 2181.1 0 0 2151.9 0 0 10873 0 0 1839.9 0 0 2186.8 0 0 2784.2 0 0 2767.1 0 0 2270.2 0 0 1818.5 0 0 1381.8 0 0 2498.5 0 0 2086.7 0 0 10289 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25678000 25678000 0 0 NaN 2404 1333 1035 1035 2862 3033 3248 3604 3248 3604 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24012 3248 3604 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24012 3248 3604 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24012 Q7Z401 731 Q7Z401 Q7Z401 C-myc promoter-binding protein DENND4A sp|Q7Z401|MYCPP_HUMAN C-myc promoter-binding protein OS=Homo sapiens GN=DENND4A PE=1 SV=2 0.999625 34.591 1.36687E-11 209.53 161.34 209.53 1 S QAKKNKLPSKSSSPNSPLPMFRRTKQEIKSA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX SSSPNS(1)PLPMFR S(-47.66)S(-49.95)S(-34.59)PNS(34.59)PLPMFR 6 2 -1.3056 12980 0 0 14061 0 0 13739 0 0 13550 0 0 10536 0 0 14312 0 0 10192 0 0 11970 0 0 12513 0 0 16100 0 0 12286 0 0 13280 0 0 13751 0 0 13956 0 0 10878 0 0 14313 0 0 10454 0 0 12582 0 0 12248 0 0 15437 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15496000 15496000 0 0 NaN 2405 1333 731 731 4445 4736 5041 5591 5041 5591 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18008 5041 5591 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18008 5041 5591 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18008 Q7Z417 212 Q7Z417 Q7Z417 Nuclear fragile X mental retardation-interacting protein 2 NUFIP2 sp|Q7Z417|NUFP2_HUMAN Nuclear fragile X mental retardation-interacting protein 2 OS=Homo sapiens GN=NUFIP2 PE=1 SV=1 0.990537 20.1987 6.80656E-08 170.02 143.29 170.02 1 S YITNGYMGKGADNDGSGSESGYTTPKKRKAR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPXXXXX GADNDGS(0.991)GS(0.009)ESGYTTPK GADNDGS(20.2)GS(-20.2)ES(-66.71)GY(-126.23)T(-125.68)T(-141.34)PK 7 3 -0.24259 14537 0 0 11551 0 0 14644 0 0 14786 0 0 15610 0 0 12689 0 0 17370 0 0 16181 0 0 15412 0 0 5418.3 0 0 13756 0 0 10930 0 0 14755 0 0 14951 0 0 15807 0 0 12866 0 0 17543 0 0 16258 0 0 15290 0 0 5476.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 40328000 40328000 0 0 NaN 2406 1335 212 212 1353 1427 1535 1698 1535 1698 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9424 1535 1698 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9424 1535 1698 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9424 Q7Z417 652 Q7Z417 Q7Z417 Nuclear fragile X mental retardation-interacting protein 2 NUFIP2 sp|Q7Z417|NUFP2_HUMAN Nuclear fragile X mental retardation-interacting protein 2 OS=Homo sapiens GN=NUFIP2 PE=1 SV=1 0.981946 17.3552 2.50301E-07 173.72 127.72 173.72 1 S SAKEQRYQRGLERNDSWGSFDLRAAIVYHTK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX NDS(0.982)WGS(0.018)FDLR NDS(17.36)WGS(-17.36)FDLR 3 2 0.79392 25730 0 0 21348 0 0 28041 0 0 20782 0 0 25722 0 0 24592 0 0 25653 0 0 27438 0 0 20699 0 0 40724 0 0 24356 0 0 20163 0 0 28074 0 0 21434 0 0 26234 0 0 24592 0 0 25981 0 0 28639 0 0 20633 0 0 38982 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 27724000 27724000 0 0 NaN 2407 1335 652 652 2795 2964 3176 3527;3528 3176 3527 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19459 3176 3527 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19459 3176 3527 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19459 Q7Z417 112 Q7Z417 Q7Z417 Nuclear fragile X mental retardation-interacting protein 2 NUFIP2 sp|Q7Z417|NUFP2_HUMAN Nuclear fragile X mental retardation-interacting protein 2 OS=Homo sapiens GN=NUFIP2 PE=1 SV=1 0.499456 0 1.01183E-10 197.73 166.01 197.73 S LNGNAGEREISLKNLSSDEATNPISRVLNGN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX NLS(0.499)S(0.499)DEAT(0.001)NPISR NLS(0)S(0)DEAT(-26.62)NPIS(-89.5)R 3 2 1.0474 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2408 1335 112 112 2867 3038 3253 3609 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12053 3253 3609 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12053 3253 3609 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12053 Q7Z417 113 Q7Z417 Q7Z417 Nuclear fragile X mental retardation-interacting protein 2 NUFIP2 sp|Q7Z417|NUFP2_HUMAN Nuclear fragile X mental retardation-interacting protein 2 OS=Homo sapiens GN=NUFIP2 PE=1 SV=1 0.499456 0 1.01183E-10 197.73 166.01 197.73 S NGNAGEREISLKNLSSDEATNPISRVLNGNQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NLS(0.499)S(0.499)DEAT(0.001)NPISR NLS(0)S(0)DEAT(-26.62)NPIS(-89.5)R 4 2 1.0474 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2409 1335 113 113 2867 3038 3253 3609 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12053 3253 3609 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12053 3253 3609 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12053 Q7Z417 572 Q7Z417 Q7Z417 Nuclear fragile X mental retardation-interacting protein 2 NUFIP2 sp|Q7Z417|NUFP2_HUMAN Nuclear fragile X mental retardation-interacting protein 2 OS=Homo sapiens GN=NUFIP2 PE=1 SV=1 0.699891 3.67751 1.40088E-11 212.55 154.31 212.55 1 S EHPVFPKAYELEKRTSPQVLGSILKSGTTSE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPXXXXXX T(0.3)S(0.7)PQVLGSILK T(-3.68)S(3.68)PQVLGS(-90.99)ILK 2 2 0.10173 21861 0 0 24988 0 0 21198 0 0 22300 0 0 21973 0 0 21382 0 0 25910 0 0 25322 0 0 25902 0 0 31138 0 0 20684 0 0 23590 0 0 21400 0 0 23046 0 0 22308 0 0 21581 0 0 26185 0 0 26185 0 0 25558 0 0 29906 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 41152000 41152000 0 0 NaN 2410 1335 572 572 3536;4941 3753;5266 5609 6234 5609 6234 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21313 5609 6234 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21313 5609 6234 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21313 Q7Z422 39 Q7Z422 Q7Z422 SUZ domain-containing protein 1 SZRD1 sp|Q7Z422|SZRD1_HUMAN SUZ domain-containing protein 1 OS=Homo sapiens GN=SZRD1 PE=1 SV=1 1 114.092 5.72426E-18 236.6 212.39 236.6 1 S EKKLKITQKESRKSKSPPKVPIVIQDDSLPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(1)PPKVPIVIQDDSLPAGPPPQIR S(114.09)PPKVPIVIQDDS(-114.09)LPAGPPPQIR 1 3 0.14441 5049.5 0 0 8651.8 0 0 7923.6 0 0 8580.4 0 0 9160.8 0 0 7078.6 0 0 6854.6 0 0 8014.9 0 0 8700.8 0 0 42809 0 0 4788.9 0 0 8172.7 0 0 7824.1 0 0 8790.3 0 0 9192.5 0 0 7254.6 0 0 7138.7 0 0 9293.2 0 0 8506.8 0 0 40496 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16566000 16566000 0 0 NaN 2411 1336 39 39 4140 4413 4704 5220 4704 5220 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20623 4704 5220 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20623 4704 5220 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20623 Q7Z434 222 Q7Z434 Q7Z434 Mitochondrial antiviral-signaling protein MAVS sp|Q7Z434|MAVS_HUMAN Mitochondrial antiviral-signaling protein OS=Homo sapiens GN=MAVS PE=1 SV=2 0.885834 8.8992 1.16915E-06 146.48 125.74 146.48 1 S TAGATSSLTPSRGPVSPSVSFQPLARSTPRA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX GPVS(0.886)PS(0.114)VSFQPLAR GPVS(8.9)PS(-8.9)VS(-45.05)FQPLAR 4 2 0.79302 9532.2 0 0 15782 0 0 10457 0 0 17116 0 0 17007 0 0 9245.2 0 0 17172 0 0 16467 0 0 16644 0 0 51362 0 0 9023.4 0 0 14916 0 0 10556 0 0 17367 0 0 16874 0 0 9805.6 0 0 17457 0 0 17785 0 0 16445 0 0 48745 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 69766000 69766000 0 0 NaN 2412 1337 222 222 1572 1656 1790 1988 1790 1988 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18348 1790 1988 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18348 1790 1988 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18348 Q7Z460 1196 Q7Z460 Q7Z460 CLIP-associating protein 1 CLASP1 sp|Q7Z460|CLAP1_HUMAN CLIP-associating protein 1 OS=Homo sapiens GN=CLASP1 PE=1 SV=1 1 86.5477 0.000122551 111.49 78.182 86.548 1 S SLRGVTEAIEKFSFRSQEDLNEPIKRDGKKE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPXXXXX S(1)QEDLNEPIKR S(86.55)QEDLNEPIKR 1 3 0.21901 20787 0 0 39758 0 0 21644 0 0 40134 0 0 39092 0 0 23412 0 0 37909 0 0 33318 0 0 42304 0 0 9527.4 0 0 19673 0 0 37560 0 0 21957 0 0 40917 0 0 38628 0 0 24355 0 0 38766 0 0 33324 0 0 41555 0 0 9742.3 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 49519000 49519000 0 0 NaN 2413 1338 1196 1196 1318;4222 1391;4500 1497;4796 1659;5322 4796 5322 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10644 1497 1659 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15865 1497 1659 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15865 Q7Z460 1091 Q7Z460 Q7Z460 CLIP-associating protein 1 CLASP1 sp|Q7Z460|CLAP1_HUMAN CLIP-associating protein 1 OS=Homo sapiens GN=CLASP1 PE=1 SV=1 0.972436 18.2922 1.71126E-05 135.95 117.17 135.95 1 S LLHNHLKNSSNTSVGSPSNTIGRTPSRHTSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPXXXXXXXX NSSNTS(0.013)VGS(0.972)PS(0.014)NTIGR NS(-85.43)S(-59.61)NT(-41.38)S(-18.77)VGS(18.29)PS(-18.29)NT(-37.37)IGR 9 2 -0.67165 6673.2 0 0 8591.2 0 0 8183.1 0 0 7823.2 0 0 5209 0 0 7727.8 0 0 4506 0 0 7630.5 0 0 9480.3 0 0 2564.1 0 0 6320.2 0 0 8111.5 0 0 8115.4 0 0 8078 0 0 5456.5 0 0 7753.9 0 0 4756.7 0 0 7735 0 0 9143.2 0 0 2591 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14826000 14826000 0 0 NaN 2414 1338 1091 1091 2940 3119 3339 3703 3339 3703 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8316 3339 3703 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8316 3339 3703 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8316 Q7Z460 646 Q7Z460 Q7Z460 CLIP-associating protein 1 CLASP1 sp|Q7Z460|CLAP1_HUMAN CLIP-associating protein 1 OS=Homo sapiens GN=CLASP1 PE=1 SV=1 0.971997 15.4278 4.87858E-16 232.87 201.04 232.87 1 S PGSYASLGRIRTRRQSSGSATNVASTPDNRG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX RQS(0.972)S(0.028)GSATNVASTPDNR RQS(15.43)S(-15.43)GS(-38.13)AT(-85.54)NVAS(-151.57)T(-170.89)PDNR 3 3 -0.86823 4949.2 0 0 5550.2 0 0 4770.2 0 0 4511 0 0 5742.5 0 0 4252.7 0 0 5887.8 0 0 5443.4 0 0 5565.6 0 0 1995.3 0 0 4682.6 0 0 5237.1 0 0 4825.8 0 0 4691.1 0 0 5771.8 0 0 4292.9 0 0 5977.5 0 0 5474.1 0 0 5505.3 0 0 2004.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 72035000 72035000 0 0 NaN 2415 1338 646 646 3428 3641 3883 4311 3883 4311 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5750 3883 4311 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5750 3883 4311 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5750 Q7Z460 598 Q7Z460 Q7Z460 CLIP-associating protein 1 CLASP1 sp|Q7Z460|CLAP1_HUMAN CLIP-associating protein 1 OS=Homo sapiens GN=CLASP1 PE=1 SV=1 0.606169 1.87284 3.40796E-11 207.07 148.75 207.07 1 S TVSTKSVSTTGSLQRSRSDIDVNAAASAKSK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPXX S(0.606)RS(0.394)DIDVNAAASAK S(1.87)RS(-1.87)DIDVNAAAS(-125.17)AK 1 3 0.47328 47213 0 0 62783 0 0 48842 0 0 65958 0 0 57355 0 0 47328 0 0 64175 0 0 57442 0 0 71732 0 0 9588.6 0 0 44682 0 0 59327 0 0 49205 0 0 67231 0 0 57805 0 0 48416 0 0 65204 0 0 57515 0 0 70457 0 0 10358 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 131180000 131180000 0 0 NaN 2416 1338 598 598 4277 4557 4857 5389 4857 5389 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10789 4857 5389 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10789 4857 5389 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10789 Q7Z460 688 Q7Z460 Q7Z460 CLIP-associating protein 1 CLASP1 sp|Q7Z460|CLAP1_HUMAN CLIP-associating protein 1 OS=Homo sapiens GN=CLASP1 PE=1 SV=1 0.984667 21.0877 6.32193E-08 156.11 127.7 156.11 1 S RSRSANPAGAGSRSSSPGKLLGSGYGGLTGG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.008)S(0.008)S(0.985)PGKLLGSGYGGLTGGSSR S(-21.09)S(-21.09)S(21.09)PGKLLGS(-55.52)GY(-91.71)GGLT(-105.24)GGS(-108.32)S(-117.55)R 3 3 -1.3829 10138 0 0 12943 0 0 12670 0 0 12076 0 0 17165 0 0 12292 0 0 19121 0 0 16516 0 0 14232 0 0 16314 0 0 9602.5 0 0 12222 0 0 12672 0 0 12456 0 0 17177 0 0 12395 0 0 19235 0 0 16895 0 0 14250 0 0 15743 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26882000 26882000 0 0 NaN 2417 1338 688 688 4440 4731 5036 5586 5036 5586 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16522 5036 5586 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16522 5036 5586 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16522 Q7Z460 559 Q7Z460 Q7Z460 CLIP-associating protein 1 CLASP1 sp|Q7Z460|CLAP1_HUMAN CLIP-associating protein 1 OS=Homo sapiens GN=CLASP1 PE=1 SV=1 0.979009 16.7838 3.88864E-16 235.5 193.12 235.5 1 S DSIVSLPQSDRSSSSSQESLNRPLSAKRSPT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPXXXX SSSS(0.021)S(0.979)QESLNRPLSAK S(-75.73)S(-74.46)S(-33.29)S(-16.78)S(16.78)QES(-75.73)LNRPLS(-172.01)AK 5 3 0.39377 17448 0 0 50641 0 0 19358 0 0 48165 0 0 36031 0 0 22672 0 0 34322 0 0 36657 0 0 57793 0 0 7900.3 0 0 16517 0 0 47825 0 0 19584 0 0 49196 0 0 35578 0 0 24054 0 0 35662 0 0 36466 0 0 56029 0 0 8287.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 45761000 45761000 0 0 NaN 2418 1338 559 559 4468 4759 5065 5620 5065 5620 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10832 5065 5620 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10832 5065 5620 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10832 Q7Z478 200 Q7Z478 Q7Z478 ATP-dependent RNA helicase DHX29 DHX29 sp|Q7Z478|DHX29_HUMAN ATP-dependent RNA helicase DHX29 OS=Homo sapiens GN=DHX29 PE=1 SV=2 0.999612 34.1081 1.11746E-10 179.03 146.1 179.03 1 S KSRPKFQSPQIQATISPPLQPKTKTYEEDPK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPXXXXXXXXX FQSPQIQATIS(1)PPLQPK FQS(-85.76)PQIQAT(-34.11)IS(34.11)PPLQPK 11 3 3.3531 10612 0 0 10572 0 0 7844.8 0 0 10110 0 0 9315.4 0 0 9447 0 0 9006.1 0 0 10782 0 0 11606 0 0 37973 0 0 10032 0 0 9984.8 0 0 8075.8 0 0 10398 0 0 9364.5 0 0 9587 0 0 9253.5 0 0 11907 0 0 11341 0 0 36006 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 46144000 46144000 0 0 NaN 2419 1339 200 200 1310 1381 1487 1649 1487 1649 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19856 1487 1649 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19856 1487 1649 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19856 Q7Z4Q2 15 Q7Z4Q2 Q7Z4Q2 HEAT repeat-containing protein 3 HEATR3 sp|Q7Z4Q2|HEAT3_HUMAN HEAT repeat-containing protein 3 OS=Homo sapiens GN=HEATR3 PE=1 SV=2 0.7765 5.40864 1.37399E-05 114.64 103.32 114.64 1 S _MGKSRTKRFKRPQFSPTGDCQAEAAAAANG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP RPQFS(0.776)PT(0.223)GDCQAEAAAAANGTGGEEDDGPAAELLEK RPQFS(5.41)PT(-5.41)GDCQAEAAAAANGT(-68.03)GGEEDDGPAAELLEK 5 4 -1.5778 1354.8 0 0 1990.3 0 0 1346.6 0 0 1576.4 0 0 2049.4 0 0 1552.5 0 0 1771.5 0 0 2204.3 0 0 1549.3 0 0 26774 0 0 1282 0 0 1877.8 0 0 1364.5 0 0 1643.4 0 0 2034.1 0 0 1615.8 0 0 1810.5 0 0 2992.5 0 0 1538.1 0 0 25262 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10354000 10354000 0 0 NaN 2420 1341 15 15 3401 3613 3854 4279 3854 4279 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19225 3854 4279 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19225 3854 4279 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19225 Q7Z4S6 1239 Q7Z4S6 Q7Z4S6 Kinesin-like protein KIF21A KIF21A sp|Q7Z4S6|KI21A_HUMAN Kinesin-like protein KIF21A OS=Homo sapiens GN=KIF21A PE=1 SV=2 0.965798 14.5083 0.00966373 74.853 50.009 74.853 1 S ISRQSSLSEKKIPEPSPVTRRKAYEKAEKSK X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX KIPEPS(0.966)PVT(0.034)R KIPEPS(14.51)PVT(-14.51)R 6 3 -0.38378 11449 0 0 24484 0 0 11743 0 0 24987 0 0 10186 0 0 12852 0 0 11838 0 0 15534 0 0 25461 0 0 2384.9 0 0 10835 0 0 23132 0 0 11792 0 0 25430 0 0 10465 0 0 13462 0 0 12344 0 0 15550 0 0 24544 0 0 2605.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17676000 17676000 0 0 NaN 2421 1342 1239 1239 2094 2215 2385 2658 2385 2658 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11803 2385 2658 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11803 2385 2658 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11803 Q7Z4S6 1229 Q7Z4S6 Q7Z4S6 Kinesin-like protein KIF21A KIF21A sp|Q7Z4S6|KI21A_HUMAN Kinesin-like protein KIF21A OS=Homo sapiens GN=KIF21A PE=1 SV=2 0.598694 1.81567 0.0169074 76.416 38.114 76.416 1 S PPGLPSKIGSISRQSSLSEKKIPEPSPVTRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX QS(0.007)S(0.599)LS(0.394)EK QS(-19.21)S(1.82)LS(-1.82)EK 3 2 0.43444 13475 0 0 59436 0 0 14259 0 0 56382 0 0 15725 0 0 12509 0 0 19610 0 0 29442 0 0 62901 0 0 4532.6 0 0 12754 0 0 56130 0 0 14338 0 0 57373 0 0 15967 0 0 14717 0 0 20961 0 0 29013 0 0 60228 0 0 4949.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 32334000 32334000 0 0 NaN 2422 1342 1229 1229 3147 3338 3569 3958 3569 3958 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8593 3569 3958 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8593 3569 3958 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8593 Q7Z4V5 454 Q7Z4V5 Q7Z4V5 Hepatoma-derived growth factor-related protein 2 HDGFRP2 sp|Q7Z4V5|HDGR2_HUMAN Hepatoma-derived growth factor-related protein 2 OS=Homo sapiens GN=HDGFRP2 PE=1 SV=1 0.999994 52.0072 0.0021734 97.797 49.138 97.797 1 S KQQAKPVKVERTRKRSEGFSMDRKVEKKKEP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX KRS(1)EGFSMDR KRS(52.01)EGFS(-52.01)MDR 3 3 -0.277 73740 0 0 42588 0 0 81947 0 0 42721 0 0 58648 0 0 78863 0 0 62923 0 0 63735 0 0 42888 0 0 7546.1 0 0 69807 0 0 40232 0 0 81767 0 0 44438 0 0 60933 0 0 77260 0 0 63296 0 0 64745 0 0 43167 0 0 8580.6 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 216150000 216150000 0 0 NaN 2423 1343 454 454 2197 2322;2323 2503;2504 2794;2795 2504 2795 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9100 2504 2795 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9100 2504 2795 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9100 Q7Z569 117 Q7Z569 Q7Z569 BRCA1-associated protein BRAP sp|Q7Z569|BRAP_HUMAN BRCA1-associated protein OS=Homo sapiens GN=BRAP PE=1 SV=2 0.999024 30.0995 6.80137E-16 220.49 178.49 220.49 1 S RSKDHSKECINAAPDSPSKQLPDQISFFSGN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPXXXXXXXXXXXX ECINAAPDS(0.999)PS(0.001)K ECINAAPDS(30.1)PS(-30.1)K 9 2 0.10713 24531 0 0 24338 0 0 24635 0 0 24688 0 0 12735 0 0 24355 0 0 14760 0 0 20965 0 0 27218 0 0 5084.2 0 0 23213 0 0 22994 0 0 24658 0 0 25323 0 0 13666 0 0 24394 0 0 15268 0 0 21314 0 0 26328 0 0 5272.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20759000 20759000 0 0 NaN 2424 1344 117 117 893 946 1025 1133 1025 1133 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10551 1025 1133 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10551 1025 1133 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10551 Q7Z569 97 Q7Z569 Q7Z569 BRCA1-associated protein BRAP sp|Q7Z569|BRAP_HUMAN BRCA1-associated protein OS=Homo sapiens GN=BRAP PE=1 SV=2 0.979679 16.8477 6.356E-07 151.73 127.48 151.73 1 S DELKTTVEERKSSEASPTAQRSKDHSKECIN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX KSSEAS(0.98)PT(0.02)AQR KS(-47.64)S(-42.18)EAS(16.85)PT(-16.85)AQR 6 3 -0.15656 9394.4 0 0 10889 0 0 9793.6 0 0 9910.2 0 0 6140.5 0 0 10487 0 0 6030.3 0 0 9416.8 0 0 11217 0 0 1358.2 0 0 8891 0 0 10281 0 0 9793.7 0 0 10244 0 0 6450.5 0 0 10475 0 0 6285.7 0 0 9528.1 0 0 10848 0 0 1496.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 38637000 38637000 0 0 NaN 2425 1344 97 97 2227 2354 2535 2832 2535 2832 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5792 2535 2832 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5792 2535 2832 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5792 Q7Z589 173 Q7Z589 Q7Z589 Protein EMSY EMSY sp|Q7Z589|EMSY_HUMAN Protein EMSY OS=Homo sapiens GN=EMSY PE=1 SV=2 0.784361 5.65546 7.52533E-08 138.88 119.51 138.88 1 S VPSGSIATVKSPRPASPASNVVVLPSGSTVY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP S(0.213)PRPAS(0.784)PAS(0.002)NVVVLPSGSTVYVK S(-5.66)PRPAS(5.66)PAS(-25.24)NVVVLPS(-72.06)GS(-82.52)T(-87.56)VY(-107.26)VK 6 3 0.0094231 6325.7 0 0 4618.4 0 0 5978.2 0 0 5004.8 0 0 10946 0 0 7157.5 0 0 10797 0 0 8245.1 0 0 5719.1 0 0 20672 0 0 5984.4 0 0 4365 0 0 6100.2 0 0 5149.7 0 0 10808 0 0 7130.8 0 0 10859 0 0 8851.2 0 0 5858.4 0 0 19656 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25668000 25668000 0 0 NaN 2426 1345 173 173 4161 4436 4728 5247 4728 5247 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18036 4728 5247 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18036 4728 5247 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18036 Q7Z591 316 Q7Z591 Q7Z591 AT-hook-containing transcription factor AKNA sp|Q7Z591|AKNA_HUMAN AT-hook-containing transcription factor OS=Homo sapiens GN=AKNA PE=1 SV=2 0.998296 27.6776 1.06063E-06 139.7 104.5 139.7 1 S KTSPKPLPSRFIGSISPLNPQPRPTRQGRPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPXXXXXXXX FIGS(0.002)IS(0.998)PLNPQPR FIGS(-27.68)IS(27.68)PLNPQPR 6 2 -0.25579 9829.3 0 0 4776.5 0 0 10742 0 0 5601.8 0 0 4364 0 0 9868.8 0 0 5434.2 0 0 6965.5 0 0 5417.3 0 0 25885 0 0 9304.4 0 0 4516.9 0 0 10688 0 0 5770 0 0 4820.3 0 0 9713.9 0 0 5479.6 0 0 7879.3 0 0 5346 0 0 24535 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6316700 6316700 0 0 NaN 2427 1346 316 316 1277 1346 1448 1606 1448 1606 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20827 1448 1606 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20827 1448 1606 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20827 Q7Z591 1043 Q7Z591 Q7Z591 AT-hook-containing transcription factor AKNA sp|Q7Z591|AKNA_HUMAN AT-hook-containing transcription factor OS=Homo sapiens GN=AKNA PE=1 SV=2 0.770728 5.2655 9.28033E-05 102.42 92.712 102.42 1 S GHKRISEQPLPNKTISPPPAPAPAAAPLPCG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP T(0.229)IS(0.771)PPPAPAPAAAPLPCGPTETIPSFLLTR T(-5.27)IS(5.27)PPPAPAPAAAPLPCGPT(-95.66)ET(-97.85)IPS(-100.82)FLLT(-100.66)R 3 3 -0.68109 8604.8 0 0 5670.9 0 0 8033.6 0 0 6237.8 0 0 6018.9 0 0 8564.8 0 0 8383 0 0 8429.2 0 0 5501.2 0 0 76756 0 0 8140.2 0 0 5360.3 0 0 8102 0 0 6407.6 0 0 6257.6 0 0 8623.9 0 0 8340.7 0 0 10773 0 0 5550.3 0 0 72470 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 33358000 33358000 0 0 NaN 2428 1346 1043 1043 4754 5071 5404 6008 5404 6008 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23754 5404 6008 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23754 5404 6008 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23754 Q7Z591 997 Q7Z591 Q7Z591 AT-hook-containing transcription factor AKNA sp|Q7Z591|AKNA_HUMAN AT-hook-containing transcription factor OS=Homo sapiens GN=AKNA PE=1 SV=2 0.830167 9.1258 0.000307388 113.27 87.743 113.27 1 S TEPSTPRSQAQRYLSSPSGPLRQRAPNFSLE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX YLS(0.068)S(0.83)PS(0.102)GPLR Y(-63.7)LS(-10.85)S(9.13)PS(-9.13)GPLR 4 2 -1.4399 12951 0 0 8640.7 0 0 13865 0 0 9396.8 0 0 8290.8 0 0 13581 0 0 8650.9 0 0 11359 0 0 9336.3 0 0 7264.1 0 0 12258 0 0 8166.9 0 0 13841 0 0 9669.4 0 0 8748.4 0 0 13412 0 0 8807.4 0 0 11698 0 0 9183.1 0 0 7102.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8932200 8932200 0 0 NaN 2429 1346 997 997 5399 5751 6138 6825 6138 6825 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15264 6138 6825 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15264 6138 6825 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15264 Q7Z5H3 394 Q7Z5H3 Q7Z5H3 Rho GTPase-activating protein 22 ARHGAP22 sp|Q7Z5H3|RHG22_HUMAN Rho GTPase-activating protein 22 OS=Homo sapiens GN=ARHGAP22 PE=1 SV=1 0.34057 0 9.93674E-05 126.25 97.52 126.25 S SQGEPGGPGLPAHRTSSLDGAAVAVLSRTAP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T(0.341)S(0.341)S(0.319)LDGAAVAVLSR T(0)S(0)S(-0.29)LDGAAVAVLS(-121.86)R 2 3 -0.12127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2430 1347 394 394 4960 5288 5631 6258 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19465 5631 6258 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19465 5631 6258 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19465 Q7Z5J4 1107 Q7Z5J4 Q7Z5J4 Retinoic acid-induced protein 1 RAI1 sp|Q7Z5J4|RAI1_HUMAN Retinoic acid-induced protein 1 OS=Homo sapiens GN=RAI1 PE=1 SV=2 0.460901 0 0.00191679 96.54 81.45 96.54 S FKSGKRVGKPSPKAASSPSNPAALPVASDSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP AAS(0.461)S(0.461)PS(0.078)NPAALPVASDSSPMGSK AAS(0)S(0)PS(-7.7)NPAALPVAS(-78.14)DS(-77.5)S(-77.16)PMGS(-93.93)K 3 3 3.0791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2431 1348 1107 1107 79 84 92 105 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16237 92 105 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16237 92 105 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16237 Q7Z5J4 1108 Q7Z5J4 Q7Z5J4 Retinoic acid-induced protein 1 RAI1 sp|Q7Z5J4|RAI1_HUMAN Retinoic acid-induced protein 1 OS=Homo sapiens GN=RAI1 PE=1 SV=2 0.460901 0 0.00191679 96.54 81.45 96.54 S KSGKRVGKPSPKAASSPSNPAALPVASDSSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AAS(0.461)S(0.461)PS(0.078)NPAALPVASDSSPMGSK AAS(0)S(0)PS(-7.7)NPAALPVAS(-78.14)DS(-77.5)S(-77.16)PMGS(-93.93)K 4 3 3.0791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2432 1348 1108 1108 79 84 92 105 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16237 92 105 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16237 92 105 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16237 Q7Z5J4 1374 Q7Z5J4 Q7Z5J4 Retinoic acid-induced protein 1 RAI1 sp|Q7Z5J4|RAI1_HUMAN Retinoic acid-induced protein 1 OS=Homo sapiens GN=RAI1 PE=1 SV=2 1 178.905 2.38839E-17 247.22 226.37 247.22 1 S PSLSDKDRGLKGAGGSPVGVEEGLVNVGTGQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP GAGGS(1)PVGVEEGLVNVGTGQK GAGGS(178.91)PVGVEEGLVNVGT(-178.91)GQK 5 3 0.24501 13686 0 0 11195 0 0 14448 0 0 13216 0 0 11312 0 0 14393 0 0 9256.9 0 0 13375 0 0 12635 0 0 12328 0 0 12953 0 0 10587 0 0 14462 0 0 13465 0 0 11639 0 0 14385 0 0 9614 0 0 13827 0 0 12324 0 0 11918 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27179000 27179000 0 0 NaN 2433 1348 1374 1374 1359 1433 1541 1704 1541 1704 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18269 1541 1704 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18269 1541 1704 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18269 Q7Z5J4 1551 Q7Z5J4 Q7Z5J4 Retinoic acid-induced protein 1 RAI1 sp|Q7Z5J4|RAI1_HUMAN Retinoic acid-induced protein 1 OS=Homo sapiens GN=RAI1 PE=1 SV=2 0.692434 4.41481 0.0222939 79.889 58.917 79.889 1 S KRKRLTRGRAKNTTSSPCKGRAKRRRQQQVL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX NT(0.017)T(0.04)S(0.251)S(0.692)PCK NT(-16.2)T(-12.34)S(-4.41)S(4.41)PCK 5 2 -0.045877 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2434 1348 1551 1551 2950 3129 3350 3715 3350 3715 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6482 3350 3715 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6482 3350 3715 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6482 Q7Z5J4 1191 Q7Z5J4 Q7Z5J4 Retinoic acid-induced protein 1 RAI1 sp|Q7Z5J4|RAI1_HUMAN Retinoic acid-induced protein 1 OS=Homo sapiens GN=RAI1 PE=1 SV=2 0.416837 0 0.00874578 73.219 70.23 73.219 S KLLDNSHLPATFKVSSSPQKEGRVSQRARVP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX VS(0.166)S(0.417)S(0.417)PQKEGR VS(-3.99)S(0)S(0)PQKEGR 3 3 0.48007 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2435 1348 1191 1191 5282 5629 6000 6666 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6447 6000 6666 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6447 6000 6666 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6447 Q7Z5J4 1192 Q7Z5J4 Q7Z5J4 Retinoic acid-induced protein 1 RAI1 sp|Q7Z5J4|RAI1_HUMAN Retinoic acid-induced protein 1 OS=Homo sapiens GN=RAI1 PE=1 SV=2 0.416837 0 0.00874578 73.219 70.23 73.219 S LLDNSHLPATFKVSSSPQKEGRVSQRARVPK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VS(0.166)S(0.417)S(0.417)PQKEGR VS(-3.99)S(0)S(0)PQKEGR 4 3 0.48007 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2436 1348 1192 1192 5282 5629 6000 6666 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6447 6000 6666 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6447 6000 6666 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6447 Q7Z5K2 221 Q7Z5K2 Q7Z5K2 Wings apart-like protein homolog WAPAL sp|Q7Z5K2|WAPL_HUMAN Wings apart-like protein homolog OS=Homo sapiens GN=WAPAL PE=1 SV=1 0.999815 36.7063 2.82186E-05 132.79 107.67 118.05 1;2 S ETNDTWNSQFGKRPESPSEISPIKGSVRTGL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPXXX RPES(1)PS(0.867)EIS(0.133)PIKGS(0.001)VR RPES(36.71)PS(8.15)EIS(-8.15)PIKGS(-31.44)VR 4 3 0.2922 10929 38154 0 9589.7 24239 0 11205 32262 0 12241 22648 0 13038 23047 0 11670 34659 0 12158 24712 0 11933 27847 0 11942 23885 0 9243.8 65323 0 10343 36081 0 9074.2 22888 0 11287 32715 0 12398 23545 0 13110 23955 0 11744 34242 0 12412 25052 0 12238 30165 0 11792 23602 0 8980.3 62154 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 87338000 36644000 50694000 0 NaN 2437 1349 221 221 3383;3384 3592;3593 3832;3833 4255;4256 3833 4256 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12450 3832 4255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13191 3832 4255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13191 Q7Z5K2 223 Q7Z5K2 Q7Z5K2 Wings apart-like protein homolog WAPAL sp|Q7Z5K2|WAPL_HUMAN Wings apart-like protein homolog OS=Homo sapiens GN=WAPAL PE=1 SV=1 0.8666 8.146 8.86276E-05 118.05 94.37 118.05 2 S NDTWNSQFGKRPESPSEISPIKGSVRTGLFE X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPXXXXX RPES(1)PS(0.867)EIS(0.133)PIKGS(0.001)VR RPES(36.71)PS(8.15)EIS(-8.15)PIKGS(-31.44)VR 6 3 0.2922 0 38154 0 0 24239 0 0 32262 0 0 22648 0 0 23047 0 0 34659 0 0 24712 0 0 27847 0 0 23885 0 0 65323 0 0 36081 0 0 22888 0 0 32715 0 0 23545 0 0 23955 0 0 34242 0 0 25052 0 0 30165 0 0 23602 0 0 62154 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 50694000 0 50694000 0 NaN 2438 1349 223 223 3383;3384 3592;3593 3833 4256 3833 4256 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12450 3833 4256 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12450 3833 4256 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12450 Q7Z5L9 318 Q7Z5L9 Q7Z5L9 Interferon regulatory factor 2-binding protein 2 IRF2BP2 sp|Q7Z5L9|I2BP2_HUMAN Interferon regulatory factor 2-binding protein 2 OS=Homo sapiens GN=IRF2BP2 PE=1 SV=2 1 73.1032 5.02928E-16 224.53 193.06 224.53 1 S KTVRDTLLALHQHGHSGPFESKFKKEPALTA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPXXXXXXXXX DTLLALHQHGHS(1)GPFESK DT(-155.26)LLALHQHGHS(73.1)GPFES(-73.1)K 12 4 -0.04248 15007 0 0 3957.3 0 0 19400 0 0 4954.8 0 0 4947.2 0 0 23058 0 0 6218.6 0 0 10309 0 0 3513.7 0 0 6397.9 0 0 14217 0 0 3744 0 0 19107 0 0 5317.4 0 0 5889.2 0 0 22156 0 0 6194.9 0 0 11028 0 0 3581.7 0 0 6263 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 36816000 36816000 0 0 NaN 2439 1350 318 318 826 874 930 1025 930 1025 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15321 930 1025 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15321 930 1025 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15321 Q7Z5L9 406 Q7Z5L9 Q7Z5L9 Interferon regulatory factor 2-binding protein 2 IRF2BP2 sp|Q7Z5L9|I2BP2_HUMAN Interferon regulatory factor 2-binding protein 2 OS=Homo sapiens GN=IRF2BP2 PE=1 SV=2 0.646423 3.81165 0.00446197 90.388 77.706 90.388 1 S MTPTSSFVSPPPPTASPHSNRTTPPEAAQNG Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX IPMTPTSSFVS(0.003)PPPPT(0.082)AS(0.646)PHS(0.269)NR IPMT(-65.03)PT(-61.25)S(-55.98)S(-52.98)FVS(-23.17)PPPPT(-8.98)AS(3.81)PHS(-3.81)NR 18 3 -0.42944 8809.1 0 0 8960.7 0 0 9016.2 0 0 9150.1 0 0 9198.1 0 0 9284.6 0 0 8352.5 0 0 9243.2 0 0 8264.3 0 0 28976 0 0 8336.5 0 0 8465.9 0 0 9067.6 0 0 9385.6 0 0 9311.5 0 0 9354.4 0 0 8540.3 0 0 10146 0 0 8158.1 0 0 27498 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 97497000 97497000 0 0 NaN 2440 1350 406 406 1909 2016;2017 2177;2178 2437;2438 2177 2437 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15783 2177 2437 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15783 2177 2437 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15783 Q7Z5L9 360 Q7Z5L9 Q7Z5L9 Interferon regulatory factor 2-binding protein 2 IRF2BP2 sp|Q7Z5L9|I2BP2_HUMAN Interferon regulatory factor 2-binding protein 2 OS=Homo sapiens GN=IRF2BP2 PE=1 SV=2 1 128.322 4.72045E-05 128.32 92.3 128.32 1 S NGSKAVARTARKRKPSPEPEGEVGPPKINGE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPXXXX RKPS(1)PEPEGEVGPPK RKPS(128.32)PEPEGEVGPPK 4 4 1.0354 40341 0 0 18446 0 0 38431 0 0 18023 0 0 21184 0 0 38311 0 0 23051 0 0 26144 0 0 19357 0 0 11819 0 0 38166 0 0 17423 0 0 38600 0 0 18857 0 0 22539 0 0 37365 0 0 23273 0 0 27052 0 0 19256 0 0 11734 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 125000000 125000000 0 0 NaN 2441 1350 360 360 2170;3297 2292;3498 2467;3735 2747;4149 3735 4149 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10164 3735 4149 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10164 3735 4149 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10164 Q7Z5L9 175 Q7Z5L9 Q7Z5L9 Interferon regulatory factor 2-binding protein 2 IRF2BP2 sp|Q7Z5L9|I2BP2_HUMAN Interferon regulatory factor 2-binding protein 2 OS=Homo sapiens GN=IRF2BP2 PE=1 SV=2 1 212.338 5.24793E-12 212.34 189.24 212.34 1 S NGFSKLEEPPELNRQSPNPRRGHAVPPTLVP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPXXXXXXXXXXX LEEPPELNRQS(1)PNPR LEEPPELNRQS(212.34)PNPR 11 3 -1.0301 47353 0 0 27803 0 0 56479 0 0 27795 0 0 26312 0 0 53245 0 0 26986 0 0 39566 0 0 31864 0 0 9252.6 0 0 44842 0 0 26265 0 0 55978 0 0 28949 0 0 28497 0 0 52080 0 0 27570 0 0 40497 0 0 31233 0 0 9628.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 768570000 768570000 0 0 NaN 2442 1350 175 175 2325 2458 2647 2958 2647 2958 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12706 2647 2958 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12706 2647 2958 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12706 Q7Z5L9 455 Q7Z5L9 Q7Z5L9 Interferon regulatory factor 2-binding protein 2 IRF2BP2 sp|Q7Z5L9|I2BP2_HUMAN Interferon regulatory factor 2-binding protein 2 OS=Homo sapiens GN=IRF2BP2 PE=1 SV=2 0.999995 52.7389 9.34371E-16 214.05 178.22 214.05 1;2 S ASKDANQVHSTTRRNSNSPPSPSSMNQRRLG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;Oxidation (M);X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX RNS(1)NSPPS(0.993)PS(0.006)S(0.001)MNQR RNS(52.74)NS(-51.13)PPS(22.39)PS(-22.39)S(-29.14)MNQR 3 3 -0.65557 11678 22419 0 5123.4 14150 0 11848 25626 0 5158.5 14167 0 6200.3 18058 0 11905 24174 0 6805.1 18629 0 7754.3 18081 0 5780.8 15295 0 5304.2 7933.1 0 11051 21226 0 4840.1 13365 0 11853 25528 0 5402.8 14706 0 6633.2 18777 0 11590 23723 0 6869.9 18844 0 8098.8 18612 0 5747.4 15233 0 5174 7888.4 0 2 3 0 2 2 0 2 3 0 2 3 0 2 3 0 2 3 0 2 3 0 2 3 0 2 3 0 2 3 0 54012000 16677000 37335000 0 NaN 2443 1350 455 455 2920;3366 3094;3095;3096;3570;3571;3572;3573 3809;3810;3811;3812 4228;4229;4230;4231;4232 3812 4232 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6904 3812 4232 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6904 3812 4232 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6904 Q7Z5L9 457 Q7Z5L9 Q7Z5L9 Interferon regulatory factor 2-binding protein 2 IRF2BP2 sp|Q7Z5L9|I2BP2_HUMAN Interferon regulatory factor 2-binding protein 2 OS=Homo sapiens GN=IRF2BP2 PE=1 SV=2 0.995904 23.9233 7.08656E-11 210.62 177.4 210.62 2 S KDANQVHSTTRRNSNSPPSPSSMNQRRLGPR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX NS(0.004)NS(0.996)PPS(0.832)PS(0.162)S(0.006)MNQR NS(-23.92)NS(23.92)PPS(7.11)PS(-7.11)S(-21.78)MNQR 4 2 0.059934 0 7734.8 0 0 2568.1 0 0 7814.5 0 0 2199.9 0 0 2882.8 0 0 7625.5 0 0 3455.9 0 0 4820.3 0 0 2812.6 0 0 2540.1 0 0 7319.4 0 0 2423.9 0 0 7804.9 0 0 2368.4 0 0 3224.2 0 0 7370.8 0 0 3472.7 0 0 5020.4 0 0 2802.5 0 0 2503.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 9312900 0 9312900 0 NaN 2444 1350 457 457 2920;3366 3094;3095;3096;3570;3571;3572;3573 3316 3676 3316 3676 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7848 3316 3676 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7848 3316 3676 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7848 Q7Z5L9 460 Q7Z5L9 Q7Z5L9 Interferon regulatory factor 2-binding protein 2 IRF2BP2 sp|Q7Z5L9|I2BP2_HUMAN Interferon regulatory factor 2-binding protein 2 OS=Homo sapiens GN=IRF2BP2 PE=1 SV=2 0.997464 26.339 2.97517E-23 282.29 236.09 282.29 1;2 S NQVHSTTRRNSNSPPSPSSMNQRRLGPREVG X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;Phospho (STY);X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPXXXXXXXX NSNSPPS(0.997)PS(0.002)SMNQR NS(-120.15)NS(-79.36)PPS(26.34)PS(-26.34)S(-36.59)MNQR 7 2 -0.42511 16148 30154 0 4262.5 16718 0 16272 33440 0 3850.9 16367 0 3600.4 20941 0 17507 31799 0 3563 22085 0 7977 22902 0 5397.3 18107 0 1418.9 10473 0 15280 28545 0 4024.3 15789 0 16222 33333 0 4198.5 17074 0 4403 22001 0 16822 31094 0 3678.9 22317 0 8413.6 23632 0 5247.8 18035 0 1520.7 10392 0 2 4 0 2 3 0 2 4 0 2 4 0 2 4 0 2 4 0 2 4 0 2 4 0 2 4 0 2 4 0 75325000 28677000 46648000 0 NaN 2445 1350 460 460 2920;3366 3094;3095;3096;3570;3571;3572;3573 3314;3315;3316;3810;3812 3674;3675;3676;4229;4231;4232 3315 3675 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7397 3315 3675 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7397 3315 3675 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7397 Q7Z5L9 240 Q7Z5L9 Q7Z5L9 Interferon regulatory factor 2-binding protein 2 IRF2BP2 sp|Q7Z5L9|I2BP2_HUMAN Interferon regulatory factor 2-binding protein 2 OS=Homo sapiens GN=IRF2BP2 PE=1 SV=2 0.837027 7.10752 7.17904E-11 198.6 174.32 198.6 1 S GSAQPTDLGAHKRPASVSSSAAVEHEQREAA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPXXX RPAS(0.837)VS(0.163)SSAAVEHEQR RPAS(7.11)VS(-7.11)S(-42.41)S(-68.3)AAVEHEQR 4 3 -0.0038886 38847 0 0 23797 0 0 38132 0 0 27447 0 0 33977 0 0 43306 0 0 33057 0 0 38065 0 0 25581 0 0 7980.1 0 0 36757 0 0 22501 0 0 38385 0 0 28214 0 0 34705 0 0 42649 0 0 33488 0 0 38626 0 0 25558 0 0 8395.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 77541000 77541000 0 0 NaN 2446 1350 240 240 3377 3585 3825 4248 3825 4248 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6444 3825 4248 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6444 3825 4248 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6444 Q7Z5L9 71 Q7Z5L9 Q7Z5L9 Interferon regulatory factor 2-binding protein 2 IRF2BP2 sp|Q7Z5L9|I2BP2_HUMAN Interferon regulatory factor 2-binding protein 2 OS=Homo sapiens GN=IRF2BP2 PE=1 SV=2 0.999426 32.4084 6.93744E-05 108.71 91.427 108.71 1 S ARQLKRAHGCFPEGRSPPGAAASAAAKPPPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.999)PPGAAAS(0.001)AAAKPPPLSAK S(32.41)PPGAAAS(-32.41)AAAKPPPLS(-102.4)AK 1 4 0.66345 44798 0 0 4828 0 0 50160 0 0 4823.5 0 0 26146 0 0 48138 0 0 22097 0 0 21592 0 0 7024.5 0 0 2048.4 0 0 42410 0 0 4560.8 0 0 49898 0 0 5648.9 0 0 27879 0 0 45989 0 0 22275 0 0 22748 0 0 7570.4 0 0 2428.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 55885000 55885000 0 0 NaN 2447 1350 71 71 4139 4412 4703 5219 4703 5219 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14491 4703 5219 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14491 4703 5219 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14491 Q7Z5R6 525 Q7Z5R6 Q7Z5R6 Amyloid beta A4 precursor protein-binding family B member 1-interacting protein APBB1IP sp|Q7Z5R6|AB1IP_HUMAN Amyloid beta A4 precursor protein-binding family B member 1-interacting protein OS=Homo sapiens GN=APBB1IP PE=1 SV=1 0.755008 4.88802 3.20961E-41 344.84 290.35 344.84 1 S HAPKSSLPPPPPVRRSSDTSGSPATPLKAKG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPXXX S(0.755)S(0.245)DTSGSPATPLK S(4.89)S(-4.89)DT(-60.59)S(-96.62)GS(-118.3)PAT(-183.43)PLK 1 2 1.4494 74755 0 0 13870 0 0 77308 0 0 14376 0 0 97707 0 0 80669 0 0 102810 0 0 58270 0 0 11136 0 0 17753 0 0 70747 0 0 13105 0 0 77958 0 0 15795 0 0 97935 0 0 77652 0 0 101890 0 0 59852 0 0 14876 0 0 18065 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 151540000 151540000 0 0 NaN 2448 1351 525 525 3491;4332 3708;4618 3954;4920 4392;5464 4920 5464 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11879 4920 5464 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11879 4920 5464 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11879 Q7Z628 50 Q7Z628 Q7Z628 Neuroepithelial cell-transforming gene 1 protein NET1 sp|Q7Z628|ARHG8_HUMAN Neuroepithelial cell-transforming gene 1 protein OS=Homo sapiens GN=NET1 PE=1 SV=1 0.423452 0 0.0124528 67.56 54.793 67.56 S TSGSELDGRCSLRRGSSFTFLTPGPNWDFTL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP GS(0.423)S(0.423)FT(0.152)FLT(0.001)PGPNWDFTLK GS(0)S(0)FT(-4.44)FLT(-28.37)PGPNWDFT(-62.85)LK 2 3 1.2774 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2449 1352 50 50 1635 1722 1861 2074 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24070 1861 2074 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24070 1861 2074 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24070 Q7Z628 51 Q7Z628 Q7Z628 Neuroepithelial cell-transforming gene 1 protein NET1 sp|Q7Z628|ARHG8_HUMAN Neuroepithelial cell-transforming gene 1 protein OS=Homo sapiens GN=NET1 PE=1 SV=1 0.423452 0 0.0124528 67.56 54.793 67.56 S SGSELDGRCSLRRGSSFTFLTPGPNWDFTLK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GS(0.423)S(0.423)FT(0.152)FLT(0.001)PGPNWDFTLK GS(0)S(0)FT(-4.44)FLT(-28.37)PGPNWDFT(-62.85)LK 3 3 1.2774 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2450 1352 51 51 1635 1722 1861 2074 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24070 1861 2074 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24070 1861 2074 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24070 Q7Z6E9 861 Q7Z6E9 Q7Z6E9 E3 ubiquitin-protein ligase RBBP6 RBBP6 sp|Q7Z6E9|RBBP6_HUMAN E3 ubiquitin-protein ligase RBBP6 OS=Homo sapiens GN=RBBP6 PE=1 SV=1 1 108.105 0.00195928 108.1 19.156 108.1 1 S AAGAQPRPSANRENFSPERFLPLNIRNSPFT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX ENFS(1)PER ENFS(108.1)PER 4 2 0.18024 21807 0 0 23319 0 0 21081 0 0 21194 0 0 19661 0 0 21892 0 0 20662 0 0 24716 0 0 23211 0 0 4177.6 0 0 20632 0 0 22017 0 0 21254 0 0 21902 0 0 20053 0 0 21956 0 0 21054 0 0 24809 0 0 22794 0 0 4505.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 88825000 88825000 0 0 NaN 2451 1353 861 861 1071 1129 1217 1338 1217 1338 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9065 1217 1338 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9065 1217 1338 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9065 Q7Z6E9 873 Q7Z6E9 Q7Z6E9 E3 ubiquitin-protein ligase RBBP6 RBBP6 sp|Q7Z6E9|RBBP6_HUMAN E3 ubiquitin-protein ligase RBBP6 OS=Homo sapiens GN=RBBP6 PE=1 SV=1 0.997954 26.883 7.67482E-07 138.66 100.05 138.66 1 S ENFSPERFLPLNIRNSPFTRGRREDYVGGQS X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPXXXXXXXXXXX FLPLNIRNS(0.998)PFT(0.002)R FLPLNIRNS(26.88)PFT(-26.88)R 9 3 -0.329 6934 0 0 3861.4 0 0 5316 0 0 4439.5 0 0 3217.8 0 0 5545.6 0 0 3298.2 0 0 5538.1 0 0 5022.2 0 0 6759 0 0 6555.3 0 0 3651 0 0 5420.4 0 0 4540.8 0 0 3392 0 0 5521.9 0 0 3400.6 0 0 5759.1 0 0 4882.2 0 0 6492.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21950000 21950000 0 0 NaN 2452 1353 873 873 1291 1361 1464 1624 1464 1624 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21896 1464 1624 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21896 1464 1624 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21896 Q7Z6E9 780 Q7Z6E9 Q7Z6E9 E3 ubiquitin-protein ligase RBBP6 RBBP6 sp|Q7Z6E9|RBBP6_HUMAN E3 ubiquitin-protein ligase RBBP6 OS=Homo sapiens GN=RBBP6 PE=1 SV=1 1 56.5476 0.0271859 56.548 18.992 56.548 1 S RYHSRSRSPQAFRGQSPNKRNVPQGETEREY X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX GQS(1)PNKR GQS(56.55)PNKR 3 3 -0.96924 10659 0 0 10654 0 0 9744.8 0 0 11134 0 0 7815.9 0 0 9648.7 0 0 9949.9 0 0 9907.4 0 0 10750 0 0 10189 0 0 10082 0 0 10067 0 0 9845.4 0 0 11379 0 0 8076.4 0 0 9760.1 0 0 10048 0 0 10235 0 0 10573 0 0 9823.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14407000 14407000 0 0 NaN 2453 1353 780 780 1579 1664 1799 2000 1799 2000 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5084 1799 2000 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5084 1799 2000 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5084 Q7Z6E9 1277 Q7Z6E9 Q7Z6E9 E3 ubiquitin-protein ligase RBBP6 RBBP6 sp|Q7Z6E9|RBBP6_HUMAN E3 ubiquitin-protein ligase RBBP6 OS=Homo sapiens GN=RBBP6 PE=1 SV=1 0.998756 33.9511 2.64007E-33 305.56 260.59 228.21 1 S SSTLVDYTSTSSTGGSPVRKSEEKTDTKRTV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX VTGTEGSSSTLVDYTSTSSTGGS(0.999)PVR VT(-104.05)GT(-92.43)EGS(-71.04)S(-63.64)S(-69.88)T(-87.77)LVDY(-88.76)T(-50.48)S(-34.98)T(-45.7)S(-33.95)S(-36.11)T(-36.14)GGS(33.95)PVR 23 3 -0.71032 14007 0 0 16821 0 0 14602 0 0 13880 0 0 13756 0 0 15140 0 0 15694 0 0 19319 0 0 15469 0 0 124920 0 0 13257 0 0 15873 0 0 14663 0 0 14451 0 0 14037 0 0 15407 0 0 15876 0 0 22980 0 0 15273 0 0 118070 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 184730000 184730000 0 0 NaN 2454 1353 1277 1277 2269;2270;5290;5291 2398;2399;5637;5638 2581;6008;6009 2884;6674;6675 6008 6674 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14943 6009 6675 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14519 6009 6675 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14519 Q7Z6E9 1179 Q7Z6E9 Q7Z6E9 E3 ubiquitin-protein ligase RBBP6 RBBP6 sp|Q7Z6E9|RBBP6_HUMAN E3 ubiquitin-protein ligase RBBP6 OS=Homo sapiens GN=RBBP6 PE=1 SV=1 0.999992 51.06 0.00533508 85.362 67.662 85.362 1 S SMKISKLEVTEIVKPSPKRKMEPDTEKMDRT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX LEVTEIVKPS(1)PK LEVT(-51.06)EIVKPS(51.06)PK 10 3 -0.13131 25734 0 0 21690 0 0 26651 0 0 24988 0 0 23761 0 0 24450 0 0 25704 0 0 24113 0 0 26298 0 0 6603.1 0 0 24355 0 0 20508 0 0 26752 0 0 25447 0 0 24312 0 0 24540 0 0 26087 0 0 24399 0 0 25923 0 0 6775.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 43266000 43266000 0 0 NaN 2455 1353 1179 1179 2344 2477 2666 2978 2666 2978 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18553 2666 2978 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18553 2666 2978 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18553 Q7Z6E9 516 Q7Z6E9 Q7Z6E9 E3 ubiquitin-protein ligase RBBP6 RBBP6 sp|Q7Z6E9|RBBP6_HUMAN E3 ubiquitin-protein ligase RBBP6 OS=Homo sapiens GN=RBBP6 PE=1 SV=1 0.999937 42.0225 0.0306289 51.073 32.327 51.073 1 S GRPGWEHSNKLGYLVSPPQQIRRGERSCYRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX LGYLVS(1)PPQQIR LGY(-42.02)LVS(42.02)PPQQIR 6 3 0.26661 3316.9 0 0 2222.4 0 0 3610.7 0 0 2249.9 0 0 3739.3 0 0 4440.8 0 0 4640.5 0 0 3564.9 0 0 2845.5 0 0 2655.8 0 0 3139.8 0 0 2099.5 0 0 3622.2 0 0 2343.6 0 0 3798.1 0 0 4347.5 0 0 4631.2 0 0 3689.9 0 0 2883.8 0 0 2583.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8591500 8591500 0 0 NaN 2456 1353 516 516 2396 2533 2726 3045 2726 3045 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19975 2726 3045 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19975 2726 3045 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19975 Q7Z6E9 360 Q7Z6E9 Q7Z6E9 E3 ubiquitin-protein ligase RBBP6 RBBP6 sp|Q7Z6E9|RBBP6_HUMAN E3 ubiquitin-protein ligase RBBP6 OS=Homo sapiens GN=RBBP6 PE=1 SV=1 0.999879 39.1773 3.77368E-07 140.6 102.83 140.6 1 S PPRPLIQRNLQPLMRSPISRQQDPLMIPVTS X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX NLQPLMRS(1)PISR NLQPLMRS(39.18)PIS(-39.18)R 8 3 -0.64919 18707 0 0 20357 0 0 20232 0 0 19707 0 0 16835 0 0 17007 0 0 15095 0 0 18955 0 0 21086 0 0 5164.4 0 0 17707 0 0 19227 0 0 20240 0 0 20231 0 0 17266 0 0 17202 0 0 15613 0 0 19093 0 0 20551 0 0 5301.6 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 59222000 59222000 0 0 NaN 2457 1353 360 360 2854 3024;3025 3239;3240 3595;3596 3240 3596 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14989 3240 3596 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14989 3240 3596 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14989 Q7Z6E9 772 Q7Z6E9 Q7Z6E9 E3 ubiquitin-protein ligase RBBP6 RBBP6 sp|Q7Z6E9|RBBP6_HUMAN E3 ubiquitin-protein ligase RBBP6 OS=Homo sapiens GN=RBBP6 PE=1 SV=1 0.946985 12.5194 0.0381717 54.343 13.616 54.343 1 S RSRSPPYRRYHSRSRSPQAFRGQSPNKRNVP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX S(0.053)RS(0.947)PQAFR S(-12.52)RS(12.52)PQAFR 3 2 -0.53154 19461 0 0 16717 0 0 19589 0 0 16628 0 0 18330 0 0 20553 0 0 17398 0 0 17971 0 0 16064 0 0 3418.4 0 0 18415 0 0 15791 0 0 19700 0 0 17142 0 0 18661 0 0 20401 0 0 17718 0 0 18230 0 0 15906 0 0 3634.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15943000 15943000 0 0 NaN 2458 1353 772 772 4299 4584 4884 5425 4884 5425 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6574 4884 5425 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6574 4884 5425 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6574 Q7Z6I6 630 Q7Z6I6 Q7Z6I6 Rho GTPase-activating protein 30 ARHGAP30 sp|Q7Z6I6|RHG30_HUMAN Rho GTPase-activating protein 30 OS=Homo sapiens GN=ARHGAP30 PE=1 SV=3 0.915251 10.334 4.92674E-23 278.53 243.22 278.53 1 S DLSPLLGPKPPIWKGSGSLEGEAAGCGRQAL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPXXX GS(0.915)GS(0.085)LEGEAAGCGR GS(10.33)GS(-10.33)LEGEAAGCGR 2 2 -0.67751 61746 0 0 19628 0 0 66321 0 0 21123 0 0 53718 0 0 67364 0 0 49577 0 0 46549 0 0 20199 0 0 8045.4 0 0 58444 0 0 18550 0 0 66356 0 0 22340 0 0 55171 0 0 65212 0 0 49860 0 0 47741 0 0 21176 0 0 8653 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 41283000 41283000 0 0 NaN 2459 1354 630 630 1612 1698 1834 2040 1834 2040 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8781 1834 2040 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8781 1834 2040 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8781 Q7Z6I6 632 Q7Z6I6 Q7Z6I6 Rho GTPase-activating protein 30 ARHGAP30 sp|Q7Z6I6|RHG30_HUMAN Rho GTPase-activating protein 30 OS=Homo sapiens GN=ARHGAP30 PE=1 SV=3 0.998555 28.3954 8.58048E-08 152.11 132.9 152.11 1 S SPLLGPKPPIWKGSGSLEGEAAGCGRQALGQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX GS(0.001)GS(0.999)LEGEAAGCGR GS(-28.4)GS(28.4)LEGEAAGCGR 4 2 1.7731 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2460 1354 632 632 1612 1698 1835 2041 1835 2041 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8397 1835 2041 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8397 1835 2041 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8397 Q7Z6P3 263 Q7Z6P3 Q7Z6P3 Ras-related protein Rab-44 RAB44 sp|Q7Z6P3|RAB44_HUMAN Ras-related protein Rab-44 OS=Homo sapiens GN=RAB44 PE=3 SV=3 1 67.5412 1.59143E-07 141.09 125.08 141.09 1 S KVLIPLEDGPPPPANSPPPQAPAGSSKQIQA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPPPPPPPPPXXXX VLIPLEDGPPPPANS(1)PPPQAPAGSSK VLIPLEDGPPPPANS(67.54)PPPQAPAGS(-68.38)S(-67.54)K 15 3 0.59958 44073 0 0 6668.9 0 0 46502 0 0 8128.6 0 0 27819 0 0 42406 0 0 31315 0 0 32601 0 0 10199 0 0 76072 0 0 41713 0 0 6308.2 0 0 46463 0 0 8807.9 0 0 29364 0 0 40996 0 0 31130 0 0 35374 0 0 10959 0 0 72385 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 53872000 53872000 0 0 NaN 2461 1355 263 263 5163 5501 5862;5863 6515;6516;6517 5863 6517 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21049 5863 6517 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21049 5863 6517 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21049 Q7Z6Z7 3376 Q7Z6Z7 Q7Z6Z7 E3 ubiquitin-protein ligase HUWE1 HUWE1 sp|Q7Z6Z7|HUWE1_HUMAN E3 ubiquitin-protein ligase HUWE1 OS=Homo sapiens GN=HUWE1 PE=1 SV=3 0.194821 0 0.0456522 44.632 34.711 44.632 S CESDRERGNKACSPCSSQSSSSGICTDFWDL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP ACS(0.179)PCS(0.195)S(0.195)QS(0.107)S(0.107)S(0.107)S(0.107)GICT(0.003)DFWDLLVK ACS(-0.37)PCS(0)S(0)QS(-2.59)S(-2.59)S(-2.59)S(-2.59)GICT(-18.83)DFWDLLVK 6 3 -3.1893 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2462 1356 3376 3376 94 100 109 122 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24166 109 122 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24166 109 122 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24166 Q7Z6Z7 3377 Q7Z6Z7 Q7Z6Z7 E3 ubiquitin-protein ligase HUWE1 HUWE1 sp|Q7Z6Z7|HUWE1_HUMAN E3 ubiquitin-protein ligase HUWE1 OS=Homo sapiens GN=HUWE1 PE=1 SV=3 0.194821 0 0.0456522 44.632 34.711 44.632 S ESDRERGNKACSPCSSQSSSSGICTDFWDLL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ACS(0.179)PCS(0.195)S(0.195)QS(0.107)S(0.107)S(0.107)S(0.107)GICT(0.003)DFWDLLVK ACS(-0.37)PCS(0)S(0)QS(-2.59)S(-2.59)S(-2.59)S(-2.59)GICT(-18.83)DFWDLLVK 7 3 -3.1893 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2463 1356 3377 3377 94 100 109 122 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24166 109 122 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24166 109 122 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24166 Q7Z6Z7 1395 Q7Z6Z7 Q7Z6Z7 E3 ubiquitin-protein ligase HUWE1 HUWE1 sp|Q7Z6Z7|HUWE1_HUMAN E3 ubiquitin-protein ligase HUWE1 OS=Homo sapiens GN=HUWE1 PE=1 SV=3 1 227.141 2.66544E-14 227.14 187.73 227.14 1 S AMSLGQDIPMDQRAESPEEVACRKEEEERKA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX AES(1)PEEVACR AES(227.14)PEEVACR 3 2 0.072116 27024 0 0 16329 0 0 26571 0 0 17017 0 0 21723 0 0 25309 0 0 20783 0 0 20839 0 0 15941 0 0 3482.5 0 0 25570 0 0 15430 0 0 26720 0 0 17564 0 0 22313 0 0 24949 0 0 21068 0 0 21181 0 0 15934 0 0 3761.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 38182000 38182000 0 0 NaN 2464 1356 1395 1395 159 165 178 202 178 202 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8287 178 202 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8287 178 202 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8287 Q7Z6Z7 3919 Q7Z6Z7 Q7Z6Z7 E3 ubiquitin-protein ligase HUWE1 HUWE1 sp|Q7Z6Z7|HUWE1_HUMAN E3 ubiquitin-protein ligase HUWE1 OS=Homo sapiens GN=HUWE1 PE=1 SV=3 0.99648 24.5205 7.83589E-08 149.54 139.21 149.54 1 S RESQLAHIKDEPPPLSPAPLTPATPSSLDPF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP ESQLAHIKDEPPPLS(0.996)PAPLT(0.004)PATPSSLDPFFSR ES(-68.07)QLAHIKDEPPPLS(24.52)PAPLT(-24.52)PAT(-59.17)PS(-71.59)S(-77.18)LDPFFS(-91.81)R 15 4 -0.63921 3177.9 0 0 4919.1 0 0 3965.5 0 0 3650.2 0 0 5005.6 0 0 3596.2 0 0 4550.9 0 0 5548 0 0 4393.7 0 0 89127 0 0 3010.1 0 0 4639.7 0 0 3959.6 0 0 3824.5 0 0 5011.7 0 0 3799.4 0 0 4649.9 0 0 8175 0 0 4341.9 0 0 84052 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 57780000 57780000 0 0 NaN 2465 1356 3919 3919 1163 1224 1321 1460 1321 1460 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22900 1321 1460 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22900 1321 1460 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22900 Q7Z6Z7 1907 Q7Z6Z7 Q7Z6Z7 E3 ubiquitin-protein ligase HUWE1 HUWE1 sp|Q7Z6Z7|HUWE1_HUMAN E3 ubiquitin-protein ligase HUWE1 OS=Homo sapiens GN=HUWE1 PE=1 SV=3 0.974453 15.8143 2.39526E-31 302.41 273.24 302.41 1 S CIRIALPAPRGSGTASDDEFENLRIKGPNAV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPXXXXXXX GSGT(0.026)AS(0.974)DDEFENLR GS(-61.26)GT(-15.81)AS(15.81)DDEFENLR 6 2 -0.35471 30669 0 0 26375 0 0 30041 0 0 29263 0 0 44090 0 0 29322 0 0 44641 0 0 36171 0 0 27877 0 0 32193 0 0 29019 0 0 24932 0 0 30459 0 0 29871 0 0 43905 0 0 29534 0 0 44955 0 0 36987 0 0 28217 0 0 31151 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 63403000 63403000 0 0 NaN 2466 1356 1907 1907 1614 1700 1837 2043;2044 1837 2043 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13801 1837 2043 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13801 1837 2043 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13801 Q7Z6Z7 3757 Q7Z6Z7 Q7Z6Z7 E3 ubiquitin-protein ligase HUWE1 HUWE1 sp|Q7Z6Z7|HUWE1_HUMAN E3 ubiquitin-protein ligase HUWE1 OS=Homo sapiens GN=HUWE1 PE=1 SV=3 0.419529 0.223284 8.89642E-11 197 167.37 197 S KKAKQTGRLGSSGLGSASSIQAAVRQLEAEA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPXXXXXX LGS(0.399)S(0.106)GLGS(0.42)AS(0.003)S(0.074)IQAAVR LGS(-0.22)S(-5.98)GLGS(0.22)AS(-22.13)S(-7.56)IQAAVR 8 2 -0.077343 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2467 1356 3757 3757 2389 2526 2719 3037 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17427 2719 3037 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17427 2719 3037 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17427 Q7Z7N9 217 Q7Z7N9 Q7Z7N9 Transmembrane protein 179B TMEM179B sp|Q7Z7N9|T179B_HUMAN Transmembrane protein 179B OS=Homo sapiens GN=TMEM179B PE=1 SV=1 0.677288 5.46389 1.68698E-06 137.85 121.88 137.85 1 S PEWSSETDALVGSRLSHS_____________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX GDPEWSSETDALVGS(0.192)RLS(0.677)HS(0.13) GDPEWS(-100.65)S(-96.18)ET(-81.17)DALVGS(-5.46)RLS(5.46)HS(-7.16) 18 3 -1.5304 10183 0 0 5185.2 0 0 10172 0 0 5102.5 0 0 6308 0 0 10737 0 0 5398.1 0 0 7742.6 0 0 5207.4 0 0 14850 0 0 9635.8 0 0 4897.8 0 0 10195 0 0 5334.7 0 0 6616.5 0 0 10501 0 0 5533.3 0 0 8329.9 0 0 5146.3 0 0 14162 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7983300 7983300 0 0 NaN 2468 1358 217 217 1391 1467 1576 1740 1576 1740 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17555 1576 1740 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17555 1576 1740 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17555 Q86SQ7 4 Q86SQ7 Q86SQ7 Serologically defined colon cancer antigen 8 SDCCAG8 sp|Q86SQ7|SDCG8_HUMAN Serologically defined colon cancer antigen 8 OS=Homo sapiens GN=SDCCAG8 PE=1 SV=1 0.825452 8.77838 8.55026E-08 43.955 28.8 43.955 1 S ____________MAKSPENSTLEEILGQYQR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP AKS(0.825)PENS(0.109)T(0.065)LEEILGQYQR AKS(8.78)PENS(-8.78)T(-11.03)LEEILGQY(-41.49)QR 3 3 1.3375 8398.1 0 0 15698 0 0 9271.7 0 0 12589 0 0 8988 0 0 10831 0 0 9681.3 0 0 10155 0 0 13758 0 0 34502 0 0 7950 0 0 14812 0 0 9283.7 0 0 13088 0 0 9151.4 0 0 10992 0 0 9933.1 0 0 11252 0 0 13402 0 0 32723 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 41627000 41627000 0 0 NaN 2469 1359 4 4 275 296 317 354 317 354 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23236 317 354 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23236 317 354 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23236 Q86TB9 278 Q86TB9 Q86TB9 Protein PAT1 homolog 1 PATL1 sp|Q86TB9|PATL1_HUMAN Protein PAT1 homolog 1 OS=Homo sapiens GN=PATL1 PE=1 SV=2 0.938587 11.8421 0.047598 51.765 23.561 51.765 1 S RAQLLGGAQLQPGRMSPSQFARVPGFVGSPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPXXXXXXXXX MS(0.939)PS(0.061)QFAR MS(11.84)PS(-11.84)QFAR 2 2 -1.6818 14251 0 0 9919.5 0 0 13913 0 0 10459 0 0 12500 0 0 14038 0 0 13899 0 0 12007 0 0 9528.6 0 0 4109 0 0 13484 0 0 9373.7 0 0 14014 0 0 10764 0 0 12784 0 0 13894 0 0 13961 0 0 12246 0 0 9587.2 0 0 4147 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6307900 6307900 0 0 NaN 2470 1361 278 278 2749 2916 3126 3473 3126 3473 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14134 3126 3473 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14134 3126 3473 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14134 Q86TB9 179 Q86TB9 Q86TB9 Protein PAT1 homolog 1 PATL1 sp|Q86TB9|PATL1_HUMAN Protein PAT1 homolog 1 OS=Homo sapiens GN=PATL1 PE=1 SV=2 0.998285 27.9391 2.84245E-16 238.07 162.95 238.07 1 S DDRDLSERALPRRSTSPIIGSPPVRAVPIGT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY) XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX S(0.002)TS(0.998)PIIGSPPVR S(-27.94)T(-39.55)S(27.94)PIIGS(-85.84)PPVR 3 2 0.59147 26930 0 0 27481 0 0 27960 0 0 27686 0 0 22318 0 0 29187 0 0 21180 0 0 25327 0 0 29412 0 0 15571 0 0 25487 0 0 25961 0 0 28023 0 0 28439 0 0 22973 0 0 29170 0 0 21840 0 0 26023 0 0 28671 0 0 15248 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 78546000 78546000 0 0 NaN 2471 1361 179 179 3512;4524 3729;4823 5138 5706 5138 5706 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13949 5138 5706 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13949 5138 5706 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13949 Q86TI0 237 Q86TI0 Q86TI0 TBC1 domain family member 1 TBC1D1 sp|Q86TI0|TBCD1_HUMAN TBC1 domain family member 1 OS=Homo sapiens GN=TBC1D1 PE=1 SV=2 0.945145 12.3628 0.0276725 61.344 23.647 61.344 1 S TGSQEPVRRPMRKSFSQPGLRSLAFRKELQD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX S(0.055)FS(0.945)QPGLR S(-12.36)FS(12.36)QPGLR 3 2 -0.30216 40707 0 0 10344 0 0 40225 0 0 11023 0 0 13419 0 0 41723 0 0 16098 0 0 24536 0 0 12130 0 0 3173.3 0 0 38517 0 0 9775.6 0 0 40208 0 0 11770 0 0 15234 0 0 40241 0 0 16149 0 0 25373 0 0 12137 0 0 3555.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 34146000 34146000 0 0 NaN 2472 1362 237 237 3763 4004 4269 4744 4269 4744 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12675 4269 4744 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12675 4269 4744 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12675 Q86U38 7 Q86U38 Q86U38 Nucleolar protein 9 NOP9 sp|Q86U38|NOP9_HUMAN Nucleolar protein 9 OS=Homo sapiens GN=NOP9 PE=1 SV=1 1 77.2604 0.00749992 77.26 45.252 77.26 1 S _________MGQGPRSPHKVGRRFPAGGKRG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX GQGPRS(1)PHK GQGPRS(77.26)PHK 6 3 0.41678 38013 0 0 23168 0 0 38210 0 0 24549 0 0 15542 0 0 38576 0 0 16520 0 0 26210 0 0 25782 0 0 2757.2 0 0 35970 0 0 21894 0 0 38189 0 0 25348 0 0 17133 0 0 37891 0 0 17023 0 0 26853 0 0 25047 0 0 3202.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 79828000 79828000 0 0 NaN 2473 1363 7 7 1577 1661 1795 1993 1795 1993 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5352 1795 1993 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5352 1795 1993 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5352 Q86U42 150 Q86U42 Q86U42 Polyadenylate-binding protein 2 PABPN1 sp|Q86U42|PABP2_HUMAN Polyadenylate-binding protein 2 OS=Homo sapiens GN=PABPN1 PE=1 SV=3 1 154.729 1.70386E-11 191.53 174.04 191.53 1 S KLKELQNEVEKQMNMSPPPGNAGPVIMSIEE X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;Oxidation (M);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP QMNMS(1)PPPGNAGPVIMSIEEK QMNMS(154.73)PPPGNAGPVIMS(-154.73)IEEK 5 3 -0.25627 47676 0 0 76695 0 0 52998 0 0 76623 0 0 53287 0 0 53432 0 0 58461 0 0 71963 0 0 83967 0 0 258780 0 0 45133 0 0 72451 0 0 53073 0 0 78305 0 0 54156 0 0 55312 0 0 59959 0 0 79263 0 0 81769 0 0 245330 0 0 7 0 0 7 0 0 7 0 0 7 0 0 7 0 0 7 0 0 7 0 0 7 0 0 7 0 0 7 0 0 122690000 122690000 0 0 NaN 2474 1364 150 150 3085 3271;3272;3273 3500;3501;3502 3876;3877;3878;3879;3880;3881;3882 3502 3882 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22269 3502 3882 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22269 3502 3882 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22269 Q86U44 350 Q86U44 Q86U44 N6-adenosine-methyltransferase 70 kDa subunit METTL3 sp|Q86U44|MTA70_HUMAN N6-adenosine-methyltransferase 70 kDa subunit OS=Homo sapiens GN=METTL3 PE=1 SV=2 0.897188 9.40841 8.48306E-17 216.85 194.75 216.85 1 S ACMDSEAPGSKDHTPSQELALTQSVGGDSSA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP DHT(0.103)PS(0.897)QELALTQSVGGDSSADR DHT(-9.41)PS(9.41)QELALT(-119.79)QS(-165.01)VGGDS(-189.13)S(-188.67)ADR 5 3 -1.8531 5697.8 0 0 5857.8 0 0 5529.1 0 0 5720.3 0 0 9939.7 0 0 7108.7 0 0 9362.1 0 0 7193.9 0 0 5891.6 0 0 11387 0 0 5391 0 0 5532.8 0 0 5630.1 0 0 5904.1 0 0 9815 0 0 7086 0 0 9462.5 0 0 7555.8 0 0 5960.5 0 0 10889 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16388000 16388000 0 0 NaN 2475 1365 350 350 697 741 791 873 791 873 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13701 791 873 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13701 791 873 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13701 Q86U70 302 Q86U70 Q86U70 LIM domain-binding protein 1 LDB1 sp|Q86U70|LDB1_HUMAN LIM domain-binding protein 1 OS=Homo sapiens GN=LDB1 PE=1 SV=2 0.999782 37.3512 3.78666E-32 319.31 304.34 319.31 1 S EPTRQQPSKRRKRKMSGGSTMSSGGGNTNNS X;X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP MS(1)GGSTMSSGGGNTNNSNSK MS(37.35)GGS(-37.35)T(-44.7)MS(-104.43)S(-144.91)GGGNT(-239.55)NNS(-296.13)NS(-308.78)K 2 3 -1.3187 22458 0 0 47006 0 0 26045 0 0 44843 0 0 61881 0 0 21541 0 0 79788 0 0 53327 0 0 51243 0 0 11068 0 0 21264 0 0 44393 0 0 26492 0 0 45801 0 0 60908 0 0 23051 0 0 79575 0 0 52593 0 0 51772 0 0 11656 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 112330000 112330000 0 0 NaN 2476 1366 302 302 2140;2743 2261;2262;2909 2434;2436;3119 2711;2713;3466 3119 3466 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8946 3119 3466 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8946 3119 3466 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8946 Q86U70 305 Q86U70 Q86U70 LIM domain-binding protein 1 LDB1 sp|Q86U70|LDB1_HUMAN LIM domain-binding protein 1 OS=Homo sapiens GN=LDB1 PE=1 SV=2 0.411175 0 5.29537E-08 156.7 140.76 156.7 S RQQPSKRRKRKMSGGSTMSSGGGNTNNSNSK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP KMS(0.118)GGS(0.411)T(0.411)MS(0.057)S(0.003)GGGNTNNSNSK KMS(-5.42)GGS(0)T(0)MS(-8.6)S(-21.79)GGGNT(-89.91)NNS(-129.09)NS(-140.61)K 6 3 -1.7399 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2477 1366 305 305 2140;2743 2261;2262;2909 2435 2712 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7147 2435 2712 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7147 2435 2712 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7147 Q86U86 39 Q86U86 Q86U86 Protein polybromo-1 PBRM1 sp|Q86U86|PB1_HUMAN Protein polybromo-1 OS=Homo sapiens GN=PBRM1 PE=1 SV=1 0.999999 58.551 4.44213E-32 298.73 279.18 298.73 1 S HSVSTPGPSRKRRRLSNLPTVDPIAVCHELY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RLS(1)NLPTVDPIAVCHELYNTIR RLS(58.55)NLPT(-58.55)VDPIAVCHELY(-260)NT(-265.18)IR 3 4 -0.30215 5760.6 0 0 10698 0 0 2603.8 0 0 4752.7 0 0 21653 0 0 4684.6 0 0 26726 0 0 13002 0 0 8810 0 0 16538 0 0 5439.2 0 0 10072 0 0 3046.2 0 0 5241.7 0 0 20903 0 0 4834.1 0 0 26471 0 0 13218 0 0 9452.7 0 0 15873 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 137460000 137460000 0 0 NaN 2478 1367 39 39 3334 3536 3773 4189 3773 4189 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23039 3773 4189 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23039 3773 4189 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23039 Q86U90 37 Q86U90 Q86U90 YrdC domain-containing protein, mitochondrial YRDC sp|Q86U90|YRDC_HUMAN YrdC domain-containing protein, mitochondrial OS=Homo sapiens GN=YRDC PE=1 SV=1 1 175.593 9.33638E-09 175.59 151.74 175.59 1 S EGPAGSRSGRLFRPPSPAPAAPGARLLRLPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPXXXXXX LFRPPS(1)PAPAAPGAR LFRPPS(175.59)PAPAAPGAR 6 3 0.3702 29726 0 0 81469 0 0 26406 0 0 79458 0 0 25029 0 0 25539 0 0 28534 0 0 42981 0 0 76534 0 0 5784.4 0 0 28116 0 0 76949 0 0 26770 0 0 80841 0 0 25576 0 0 28235 0 0 30191 0 0 42612 0 0 73480 0 0 6441.4 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 379200000 379200000 0 0 NaN 2479 1368 37 37 2353 2486 2675 2987;2988 2675 2988 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15497 2675 2988 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15497 2675 2988 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15497 Q86U90 60 Q86U90 Q86U90 YrdC domain-containing protein, mitochondrial YRDC sp|Q86U90|YRDC_HUMAN YrdC domain-containing protein, mitochondrial OS=Homo sapiens GN=YRDC PE=1 SV=1 1 81.9432 0.00258847 94.61 81.409 94.61 1 S ARLLRLPGSGAVQAASPERAGWTEALRAAVA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPXXXXXXXXXXXX LPGSGAVQAAS(1)PER LPGS(-81.94)GAVQAAS(81.94)PER 11 3 0.28302 11794 0 0 8771.6 0 0 11092 0 0 9263.1 0 0 8196.3 0 0 11926 0 0 8078 0 0 9503.7 0 0 9390.5 0 0 2580.7 0 0 11157 0 0 8289.1 0 0 11174 0 0 9523.9 0 0 8488.1 0 0 11809 0 0 8264.3 0 0 9704.5 0 0 9209.9 0 0 2649.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23379000 23379000 0 0 NaN 2480 1368 60 60 2496 2635 2829 3156 2829 3156 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12201 2829 3156 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12201 2829 3156 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12201 Q86UE4 298 Q86UE4 Q86UE4 Protein LYRIC MTDH sp|Q86UE4|LYRIC_HUMAN Protein LYRIC OS=Homo sapiens GN=MTDH PE=1 SV=2 0.999928 41.4237 2.61223E-10 198.38 150.2 198.38 1 S GGGWNEKSVKLSSQISAGEEKWNSVSPASAG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP LSSQIS(1)AGEEK LS(-74.66)S(-41.42)QIS(41.42)AGEEK 6 2 -0.17222 60412 0 0 41079 0 0 59207 0 0 42306 0 0 66299 0 0 58185 0 0 77060 0 0 59665 0 0 45508 0 0 31042 0 0 57161 0 0 38813 0 0 59794 0 0 43619 0 0 66984 0 0 57690 0 0 77060 0 0 60726 0 0 46241 0 0 30611 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 68834000 68834000 0 0 NaN 2481 1369 298 298 2598;2599 2744;2745 2943;2944 3277;3278 2943 3277 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13276 2943 3277 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13276 2943 3277 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13276 Q86UE4 568 Q86UE4 Q86UE4 Protein LYRIC MTDH sp|Q86UE4|LYRIC_HUMAN Protein LYRIC OS=Homo sapiens GN=MTDH PE=1 SV=2 0.999734 35.8369 2.08E-07 156.5 125.91 156.5 1 S NSVPPSQTKSETSWESPKQIKKKKKARRET_ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX SETSWES(1)PKQIK S(-66.06)ET(-53.11)S(-35.84)WES(35.84)PKQIK 7 3 0.97933 22560 0 0 14435 0 0 22057 0 0 12910 0 0 22795 0 0 23722 0 0 20991 0 0 19862 0 0 14894 0 0 7749.8 0 0 21346 0 0 13628 0 0 22245 0 0 13522 0 0 23058 0 0 23262 0 0 21286 0 0 20306 0 0 14955 0 0 7757 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18226000 18226000 0 0 NaN 2482 1369 568 568 3727 3968 4231 4704 4231 4704 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14306 4231 4704 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14306 4231 4704 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14306 Q86UE8 99 Q86UE8 Q86UE8 Serine/threonine-protein kinase tousled-like 2 TLK2 sp|Q86UE8|TLK2_HUMAN Serine/threonine-protein kinase tousled-like 2 OS=Homo sapiens GN=TLK2 PE=1 SV=2 0.950279 12.8137 4.56966E-11 188.23 171.08 188.23 1 S ISDYFEFAGGSAPGTSPGRSVPPVARSSPQH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX ISDYFEFAGGSAPGT(0.05)S(0.95)PGR IS(-149.54)DY(-168.06)FEFAGGS(-51.61)APGT(-12.81)S(12.81)PGR 16 3 -0.64872 3933.7 0 0 3929.3 0 0 4480.4 0 0 4035.2 0 0 3865 0 0 4471.5 0 0 4411.1 0 0 4151.1 0 0 4147.6 0 0 11466 0 0 3724.3 0 0 3712.4 0 0 4473.5 0 0 4143.8 0 0 3966 0 0 4480.1 0 0 4456.7 0 0 4521.8 0 0 4103.6 0 0 10893 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30042000 30042000 0 0 NaN 2483 1370 99 99 1936 2044 2206 2466 2206 2466 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22163 2206 2466 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22163 2206 2466 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22163 Q86UE8 771 Q86UE8 Q86UE8 Serine/threonine-protein kinase tousled-like 2 TLK2 sp|Q86UE8|TLK2_HUMAN Serine/threonine-protein kinase tousled-like 2 OS=Homo sapiens GN=TLK2 PE=1 SV=2 0.398394 0.450906 8.39697E-08 160.11 152.91 160.11 S GAAIASTSGASNNSSSN______________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPXXXXXXXXXXXXXX KSVSTSSPAGAAIASTSGASNNS(0.359)S(0.242)S(0.398)N KS(-135.98)VS(-132.14)T(-127.6)S(-122.83)S(-117.2)PAGAAIAS(-73.43)T(-65.94)S(-67.06)GAS(-44.48)NNS(-0.45)S(-2.16)S(0.45)N 25 3 -0.41575 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2484 1370 771 771 2241 2369 2550 2847 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12104 2550 2847 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12104 2550 2847 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12104 Q86UK7 437 Q86UK7 Q86UK7 Zinc finger protein 598 ZNF598 sp|Q86UK7|ZN598_HUMAN Zinc finger protein 598 OS=Homo sapiens GN=ZNF598 PE=1 SV=1 0.993306 21.7736 0.000225012 100.19 82.626 100.19 1 S AAPGCVGVPGALPPPSPKLKDEDFPSLSAST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX ETSTNGPVSQEAFSVT(0.007)GPAAPGCVGVPGALPPPS(0.993)PK ET(-81.07)S(-81.07)T(-81.2)NGPVS(-75.57)QEAFS(-40.35)VT(-21.77)GPAAPGCVGVPGALPPPS(21.77)PK 34 4 0.60653 2209 0 0 2030 0 0 2968.7 0 0 2695.3 0 0 2297.7 0 0 2214.9 0 0 1855.6 0 0 3106 0 0 3047.7 0 0 22086 0 0 2093.1 0 0 1921.5 0 0 2936.6 0 0 2719.2 0 0 2366.2 0 0 2294.3 0 0 1942.7 0 0 3746.6 0 0 2956.6 0 0 20869 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11471000 11471000 0 0 NaN 2485 1371 437 437 1197 1259 1358 1505 1358 1505 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20432 1358 1505 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20432 1358 1505 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20432 Q86UP2 75 Q86UP2 Q86UP2 Kinectin KTN1 sp|Q86UP2|KTN1_HUMAN Kinectin OS=Homo sapiens GN=KTN1 PE=1 SV=1 0.999953 43.2551 8.21796E-17 247.22 225.91 247.22 1 S KKNKKKEIQNGNLHESDSESVPRDFKLSDAL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPXXXXXXXX EIQNGNLHES(1)DSESVPR EIQNGNLHES(43.26)DS(-43.26)ES(-93.97)VPR 10 3 0.5082 24252 0 0 23129 0 0 24117 0 0 24706 0 0 28133 0 0 23547 0 0 28840 0 0 25565 0 0 25139 0 0 19428 0 0 22948 0 0 21858 0 0 24342 0 0 25252 0 0 28319 0 0 23716 0 0 29221 0 0 26150 0 0 24962 0 0 18886 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 56967000 56967000 0 0 NaN 2486 1372 75 75 998 1053 1139 1256 1139 1256 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9896 1139 1256 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9896 1139 1256 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9896 Q86US8 332 Q86US8 Q86US8 Telomerase-binding protein EST1A SMG6 sp|Q86US8|EST1A_HUMAN Telomerase-binding protein EST1A OS=Homo sapiens GN=SMG6 PE=1 SV=2 1 67.5787 0.0106883 67.579 48.255 67.579 1 S PRRSSERKRHLERNWSGRGEGEQKNSAKEYR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX NWS(1)GRGEGEQK NWS(67.58)GRGEGEQK 3 3 0.51191 24104 0 0 21475 0 0 26558 0 0 22658 0 0 13379 0 0 23593 0 0 15374 0 0 22299 0 0 26881 0 0 5869 0 0 22818 0 0 20293 0 0 26443 0 0 23207 0 0 14394 0 0 23602 0 0 15869 0 0 22594 0 0 26035 0 0 6042.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30682000 30682000 0 0 NaN 2487 1373 332 332 2965 3144 3366 3731 3366 3731 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8943 3366 3731 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8943 3366 3731 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8943 Q86UU1 461 Q86UU1 Q86UU1 Pleckstrin homology-like domain family B member 1 PHLDB1 sp|Q86UU1|PHLB1_HUMAN Pleckstrin homology-like domain family B member 1 OS=Homo sapiens GN=PHLDB1 PE=1 SV=1 0.968429 14.9044 0.0193248 65.179 38.795 65.179 1 S LGRRGLDSMRELPPLSPSLSRRALSPLPTRT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX ELPPLS(0.968)PS(0.031)LSR ELPPLS(14.9)PS(-14.9)LS(-35.64)R 6 2 0.81634 9201.9 0 0 13433 0 0 10596 0 0 15733 0 0 11061 0 0 9010.8 0 0 8495.9 0 0 11864 0 0 14303 0 0 14495 0 0 8712.6 0 0 12702 0 0 10591 0 0 15906 0 0 11167 0 0 9395.1 0 0 8930.3 0 0 12226 0 0 13867 0 0 13923 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17150000 17150000 0 0 NaN 2488 1374 461 461 1040 1096 1184 1303 1184 1303 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17746 1184 1303 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17746 1184 1303 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17746 Q86UU1 443 Q86UU1 Q86UU1 Pleckstrin homology-like domain family B member 1 PHLDB1 sp|Q86UU1|PHLB1_HUMAN Pleckstrin homology-like domain family B member 1 OS=Homo sapiens GN=PHLDB1 PE=1 SV=1 1 63.8715 0.003594 95.507 68.079 95.507 1 S TFSDGLATRTLQPPESPRLGRRGLDSMRELP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX TLQPPES(1)PR T(-63.87)LQPPES(63.87)PR 7 2 0.22002 15968 0 0 19950 0 0 16696 0 0 20115 0 0 25140 0 0 16969 0 0 24668 0 0 21426 0 0 23076 0 0 11411 0 0 15112 0 0 18847 0 0 16873 0 0 20593 0 0 25005 0 0 17226 0 0 25089 0 0 21663 0 0 22836 0 0 11241 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14420000 14420000 0 0 NaN 2489 1374 443 443 4785 5103 5437 6048 5437 6048 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10244 5437 6048 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10244 5437 6048 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10244 Q86UX7 337 Q86UX7 Q86UX7 Fermitin family homolog 3 FERMT3 sp|Q86UX7|URP2_HUMAN Fermitin family homolog 3 OS=Homo sapiens GN=FERMT3 PE=1 SV=1 0.97958 16.8097 2.45591E-06 137.45 111.3 137.45 1 S DLDVALSNLEVKLEGSAPTDVLDSLTTIPEL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP LEGS(0.98)APT(0.02)DVLDSLTTIPELK LEGS(16.81)APT(-16.81)DVLDS(-82.72)LT(-99.18)T(-107.56)IPELK 4 3 -0.26079 4088.4 0 0 3136.4 0 0 4315 0 0 3967.4 0 0 12743 0 0 5194.3 0 0 14624 0 0 7289.2 0 0 4813.1 0 0 44088 0 0 3869.6 0 0 2967.6 0 0 4438.7 0 0 4042.6 0 0 12452 0 0 5261 0 0 14527 0 0 8558.9 0 0 5165.2 0 0 41683 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 109110000 109110000 0 0 NaN 2490 1375 337 337 2327 2460 2649 2961 2649 2961 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24137 2649 2961 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24137 2649 2961 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24137 Q86V48 394 Q86V48 Q86V48 Leucine zipper protein 1 LUZP1 sp|Q86V48|LUZP1_HUMAN Leucine zipper protein 1 OS=Homo sapiens GN=LUZP1 PE=1 SV=2 1 75.7391 0.00442848 92.732 38.575 75.739 1 S HGSEASVSKHTARELSPQHKRERLRNREFAL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX ELS(1)PQHKR ELS(75.74)PQHKR 3 3 -0.1497 57104 0 0 53688 0 0 56379 0 0 52773 0 0 58810 0 0 55625 0 0 62415 0 0 57153 0 0 56550 0 0 6369 0 0 54032 0 0 50712 0 0 56848 0 0 54287 0 0 59582 0 0 55660 0 0 63199 0 0 57462 0 0 56046 0 0 7319.9 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 107880000 107880000 0 0 NaN 2491 1376 394 394 1053;1054 1109;1110 1197;1198 1316;1317 1198 1317 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6592 1197 1316 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8175 1197 1316 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8175 Q86V48 574 Q86V48 Q86V48 Leucine zipper protein 1 LUZP1 sp|Q86V48|LUZP1_HUMAN Leucine zipper protein 1 OS=Homo sapiens GN=LUZP1 PE=1 SV=2 0.989892 21.4211 3.34613E-06 155.81 97.412 155.81 1 S GCSKAIGALASSRRSSSEGLSKGKKAANGLE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX RS(0.003)S(0.99)S(0.007)EGLSK RS(-25.23)S(21.42)S(-21.42)EGLS(-105.69)K 3 3 0.27852 17302 0 0 14153 0 0 17495 0 0 12486 0 0 29300 0 0 15858 0 0 34800 0 0 20477 0 0 14630 0 0 1487.9 0 0 16373 0 0 13360 0 0 17760 0 0 12976 0 0 29096 0 0 15805 0 0 34607 0 0 20405 0 0 15291 0 0 1874.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 51151000 51151000 0 0 NaN 2492 1376 574 574 3508 3725 3971 4410 3971 4410 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7502 3971 4410 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7502 3971 4410 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7502 Q86V81 239 Q86V81 Q86V81 THO complex subunit 4 ALYREF sp|Q86V81|THOC4_HUMAN THO complex subunit 4 OS=Homo sapiens GN=ALYREF PE=1 SV=3 1 142.936 4.74497E-08 169.08 151.26 169.08 1 S RGRGRGAGRNSKQQLSAEELDAQLDAYNARM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPX QQLS(1)AEELDAQLDAYNAR QQLS(142.94)AEELDAQLDAY(-142.94)NAR 4 3 -0.28422 11433 0 0 11392 0 0 11955 0 0 11719 0 0 10163 0 0 12117 0 0 11044 0 0 12623 0 0 11550 0 0 24363 0 0 10821 0 0 10764 0 0 11987 0 0 12019 0 0 10432 0 0 12180 0 0 11213 0 0 13376 0 0 11375 0 0 23233 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 14018000 14018000 0 0 NaN 2493 1377 239 239 3114 3303 3533 3916;3917 3533 3916 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18519 3533 3916 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18519 3533 3916 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18519 Q86VI3 1424 Q86VI3 Q86VI3 Ras GTPase-activating-like protein IQGAP3 IQGAP3 sp|Q86VI3|IQGA3_HUMAN Ras GTPase-activating-like protein IQGAP3 OS=Homo sapiens GN=IQGAP3 PE=1 SV=2 0.847909 7.47024 5.99034E-05 125.67 102.07 125.67 1 S QACTAQTPEPLRRHRSLTAHSLLPLAEKQRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX S(0.848)LT(0.152)AHSLLPLAEK S(7.47)LT(-7.47)AHS(-34.94)LLPLAEK 1 3 -0.69373 7727.9 0 0 8145.4 0 0 7849 0 0 7815.9 0 0 4392.6 0 0 7985.8 0 0 5761 0 0 7205.4 0 0 9146.7 0 0 5459.5 0 0 7313 0 0 7692.8 0 0 7856.8 0 0 8047.9 0 0 4684.3 0 0 7997.5 0 0 5891.2 0 0 7422.3 0 0 8881.5 0 0 5307.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18113000 18113000 0 0 NaN 2494 1379 1424 1424 4011 4276 4564 5072 4564 5072 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20371 4564 5072 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20371 4564 5072 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20371 Q86VM9 46 Q86VM9 Q86VM9 Zinc finger CCCH domain-containing protein 18 ZC3H18 sp|Q86VM9|ZCH18_HUMAN Zinc finger CCCH domain-containing protein 18 OS=Homo sapiens GN=ZC3H18 PE=1 SV=2 0.999976 46.1095 0.000146186 117.27 81.773 117.27 1 S DSGSDQDLDGAGVRASDLEDEESAARGPSQE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPXXXXX AS(1)DLEDEESAAR AS(46.11)DLEDEES(-46.11)AAR 2 2 0.3601 16897 0 0 22336 0 0 16044 0 0 23128 0 0 18810 0 0 17898 0 0 17277 0 0 18618 0 0 24536 0 0 19533 0 0 15985 0 0 21105 0 0 16235 0 0 23615 0 0 18910 0 0 18219 0 0 17859 0 0 19236 0 0 23902 0 0 18824 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37481000 37481000 0 0 NaN 2495 1380 46 46 441 470 505 566 505 566 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11274 505 566 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11274 505 566 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11274 Q86VM9 67 Q86VM9 Q86VM9 Zinc finger CCCH domain-containing protein 18 ZC3H18 sp|Q86VM9|ZCH18_HUMAN Zinc finger CCCH domain-containing protein 18 OS=Homo sapiens GN=ZC3H18 PE=1 SV=2 1 79.4044 4.64597E-23 257.01 244.88 257.01 1 S ESAARGPSQEEEDNHSDEEDRASEPKSQDQD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPPXXXXX GPSQEEEDNHS(1)DEEDRASEPK GPS(-154.48)QEEEDNHS(79.4)DEEDRAS(-79.4)EPK 11 4 0.007087 6463 0 0 6833.9 0 0 7510.1 0 0 6757.1 0 0 4520.4 0 0 6592.8 0 0 4213.2 0 0 5982.3 0 0 6187.6 0 0 1963.7 0 0 6119.6 0 0 6455.3 0 0 7464.9 0 0 6940 0 0 4761.3 0 0 6611.7 0 0 4357.5 0 0 6083.5 0 0 6021.5 0 0 1987.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6848400 6848400 0 0 NaN 2496 1380 67 67 1567 1651 1785 1983 1785 1983 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6761 1785 1983 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6761 1785 1983 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6761 Q86VM9 534 Q86VM9 Q86VM9 Zinc finger CCCH domain-containing protein 18 ZC3H18 sp|Q86VM9|ZCH18_HUMAN Zinc finger CCCH domain-containing protein 18 OS=Homo sapiens GN=ZC3H18 PE=1 SV=2 0.968593 15.2371 0.000456712 113.99 70.221 113.99 1 S WRRSKSPKKKLGVSVSPSRARRRRKTSASSA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX LGVS(0.002)VS(0.969)PS(0.029)R LGVS(-26.05)VS(15.24)PS(-15.24)R 6 2 0.23878 19701 0 0 32997 0 0 19432 0 0 34674 0 0 21222 0 0 19752 0 0 21485 0 0 25710 0 0 34195 0 0 3223 0 0 18641 0 0 31181 0 0 19605 0 0 35260 0 0 21446 0 0 20545 0 0 22206 0 0 25656 0 0 33201 0 0 3629.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1046900000 1046900000 0 0 NaN 2497 1380 534 534 2116;2395 2237;2532 2725 3044 2725 3044 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12825 2725 3044 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12825 2725 3044 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12825 Q86VM9 536 Q86VM9 Q86VM9 Zinc finger CCCH domain-containing protein 18 ZC3H18 sp|Q86VM9|ZCH18_HUMAN Zinc finger CCCH domain-containing protein 18 OS=Homo sapiens GN=ZC3H18 PE=1 SV=2 0.484657 0.394054 0.0112806 70.272 47.552 70.272 S RSKSPKKKLGVSVSPSRARRRRKTSASSASA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPXXXXXXXXXXXXXX KLGVS(0.073)VS(0.443)PS(0.485)R KLGVS(-8.24)VS(-0.39)PS(0.39)R 9 3 0.76733 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2498 1380 536 536 2116;2395 2237;2532 2410 2686 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11979 2410 2686 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11979 2410 2686 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11979 Q86VM9 868 Q86VM9 Q86VM9 Zinc finger CCCH domain-containing protein 18 ZC3H18 sp|Q86VM9|ZCH18_HUMAN Zinc finger CCCH domain-containing protein 18 OS=Homo sapiens GN=ZC3H18 PE=1 SV=2 1 45.6025 0.0546051 45.603 23.455 45.603 1 S PDRGSRDRKSGGRLGSPKPERQRGQNSKAPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX LGS(1)PKPER LGS(45.6)PKPER 3 2 0.16146 30602 0 0 38910 0 0 34790 0 0 38058 0 0 35053 0 0 31807 0 0 36642 0 0 37605 0 0 40714 0 0 7206.2 0 0 28973 0 0 36752 0 0 34797 0 0 39029 0 0 35583 0 0 32247 0 0 37333 0 0 37713 0 0 40000 0 0 7655.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 248580000 248580000 0 0 NaN 2499 1380 868 868 2384 2521 2714 3032 2714 3032 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8945 2714 3032 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8945 2714 3032 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8945 Q86VM9 893 Q86VM9 Q86VM9 Zinc finger CCCH domain-containing protein 18 ZC3H18 sp|Q86VM9|ZCH18_HUMAN Zinc finger CCCH domain-containing protein 18 OS=Homo sapiens GN=ZC3H18 PE=1 SV=2 0.999999 58.82 2.34389E-05 138.71 93.429 138.71 1 S NSKAPAAPADRKRQLSPQSKSSSKVTSVPGK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX RQLS(1)PQSK RQLS(58.82)PQS(-58.82)K 4 3 0.75728 58722 0 0 77741 0 0 58116 0 0 74832 0 0 59497 0 0 55684 0 0 67193 0 0 69054 0 0 81225 0 0 15578 0 0 55564 0 0 73423 0 0 58585 0 0 76705 0 0 60419 0 0 56867 0 0 68412 0 0 69218 0 0 79550 0 0 16267 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 371560000 371560000 0 0 NaN 2500 1380 893 893 3078;3419 3264;3631 3492;3873 3868;4299 3873 4299 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7273 3873 4299 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7273 3873 4299 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7273 Q86VM9 852 Q86VM9 Q86VM9 Zinc finger CCCH domain-containing protein 18 ZC3H18 sp|Q86VM9|ZCH18_HUMAN Zinc finger CCCH domain-containing protein 18 OS=Homo sapiens GN=ZC3H18 PE=1 SV=2 0.5 0 0.00191873 113.1 65.227 113.1 1 S DKDRQSPPPAKRPNTSPDRGSRDRKSGGRLG X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RPNT(0.5)S(0.5)PDR RPNT(0)S(0)PDR 5 2 -0.15616 2390.9 0 0 4382.6 0 0 2411 0 0 5142.1 0 0 3903.9 0 0 2325 0 0 3722.7 0 0 4157.3 0 0 5025.4 0 0 985.01 0 0 2262.5 0 0 4144.4 0 0 2444.5 0 0 5188.1 0 0 3872.2 0 0 2481 0 0 3833.7 0 0 4128.7 0 0 4903.3 0 0 1023.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28054000 28054000 0 0 NaN 2501 1380 852 852 3395 3607 3847 4272 3847 4272 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4885 3847 4272 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4885 3847 4272 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4885 Q86VM9 842 Q86VM9 Q86VM9 Zinc finger CCCH domain-containing protein 18 ZC3H18 sp|Q86VM9|ZCH18_HUMAN Zinc finger CCCH domain-containing protein 18 OS=Homo sapiens GN=ZC3H18 PE=1 SV=2 0.998874 29.5112 0.0122582 68.088 48.765 68.088 1 S KGSRKRYEPSDKDRQSPPPAKRPNTSPDRGS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPXXXXXXXXXX YEPS(0.001)DKDRQS(0.999)PPPAK Y(-50.81)EPS(-29.51)DKDRQS(29.51)PPPAK 10 4 -0.10518 9525.3 0 0 11827 0 0 10349 0 0 11657 0 0 10759 0 0 9688.2 0 0 10181 0 0 10035 0 0 12210 0 0 2223.4 0 0 9016.4 0 0 11172 0 0 10377 0 0 11948 0 0 10888 0 0 9807.4 0 0 10446 0 0 10120 0 0 11961 0 0 2325.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 59735000 59735000 0 0 NaN 2502 1380 842 842 5366 5716 6095 6774 6095 6774 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8889 6095 6774 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8889 6095 6774 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8889 Q86VP3 437 Q86VP3 Q86VP3 Phosphofurin acidic cluster sorting protein 2 PACS2 sp|Q86VP3|PACS2_HUMAN Phosphofurin acidic cluster sorting protein 2 OS=Homo sapiens GN=PACS2 PE=1 SV=3 0.441057 0 0.0260973 76.282 27.222 76.282 S TRSEGKQAGRRGRSTSLKERQAARPQNERAN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.118)T(0.441)S(0.441)LKER S(-5.73)T(0)S(0)LKER 3 3 -1.5104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2503 1381 437 437 4520 4819 5134 5702 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7360 5134 5702 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7360 5134 5702 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7360 Q86VQ1 171 Q86VQ1 Q86VQ1 Glucocorticoid-induced transcript 1 protein GLCCI1 sp|Q86VQ1|GLCI1_HUMAN Glucocorticoid-induced transcript 1 protein OS=Homo sapiens GN=GLCCI1 PE=1 SV=1 0.361869 0 2.09302E-10 179.92 151.42 156.67 S AKSQQVRTSSTIRRTSSLDTITGPYLTGQWP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T(0.362)S(0.362)S(0.276)LDTITGPYLTGQWPR T(0)S(0)S(-1.17)LDT(-40.79)IT(-85.52)GPY(-123.74)LT(-140.9)GQWPR 2 3 -0.79723 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2504 1382 171 171 3538;4961 3755;5289 5632 6259 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22979 4001 4441 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20493 4001 4441 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20493 Q86VQ1 172 Q86VQ1 Q86VQ1 Glucocorticoid-induced transcript 1 protein GLCCI1 sp|Q86VQ1|GLCI1_HUMAN Glucocorticoid-induced transcript 1 protein OS=Homo sapiens GN=GLCCI1 PE=1 SV=1 0.333309 0 2.09302E-10 179.92 151.42 179.92 S KSQQVRTSSTIRRTSSLDTITGPYLTGQWPR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RT(0.333)S(0.333)S(0.333)LDTITGPYLTGQWPR RT(0)S(0)S(0)LDT(-36.57)IT(-89.38)GPY(-134.22)LT(-152.36)GQWPR 4 3 1.308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2505 1382 172 172 3538;4961 3755;5289 4001 4441 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20493 4001 4441 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20493 4001 4441 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20493 Q86VQ1 223 Q86VQ1 Q86VQ1 Glucocorticoid-induced transcript 1 protein GLCCI1 sp|Q86VQ1|GLCI1_HUMAN Glucocorticoid-induced transcript 1 protein OS=Homo sapiens GN=GLCCI1 PE=1 SV=1 0.898682 9.72704 1.17226E-10 202.13 35.985 202.13 1 S WAEEGAEKRSHQRSASWGSADQLKEQIAKLR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX S(0.096)AS(0.899)WGS(0.006)ADQLK S(-9.73)AS(9.73)WGS(-22.04)ADQLK 3 3 -0.41792 12884 0 0 9164.7 0 0 11895 0 0 9386.9 0 0 5475.1 0 0 12944 0 0 5052.7 0 0 9749 0 0 8515.8 0 0 2161.5 0 0 12188 0 0 8658.9 0 0 11955 0 0 9681.8 0 0 5932.5 0 0 12780 0 0 5258.3 0 0 9967.9 0 0 8255.7 0 0 2261 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 33127000 33127000 0 0 NaN 2506 1382 223 223 3626 3855 4108 4565 4108 4565 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15923 4108 4565 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15923 4108 4565 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15923 Q86VQ1 303 Q86VQ1 Q86VQ1 Glucocorticoid-induced transcript 1 protein GLCCI1 sp|Q86VQ1|GLCI1_HUMAN Glucocorticoid-induced transcript 1 protein OS=Homo sapiens GN=GLCCI1 PE=1 SV=1 1 122.569 8.15358E-05 122.57 87.615 122.57 1 S PKSSVSRVPCNVEGISPELEKVFIKENNGKE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPXXXXXXXXXX VPCNVEGIS(1)PELEK VPCNVEGIS(122.57)PELEK 9 3 0.052424 8369.9 0 0 6080.5 0 0 7996.5 0 0 6564.1 0 0 6317.1 0 0 9265.1 0 0 5918.8 0 0 6246.2 0 0 6507.2 0 0 7304.7 0 0 7918.7 0 0 5746.8 0 0 8052.2 0 0 6753.7 0 0 6504.7 0 0 9142.2 0 0 6060.1 0 0 6602.5 0 0 6395.7 0 0 7022.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10638000 10638000 0 0 NaN 2507 1382 303 303 5202 5546 5910 6567 5910 6567 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18038 5910 6567 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18038 5910 6567 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18038 Q86VQ1 406 Q86VQ1 Q86VQ1 Glucocorticoid-induced transcript 1 protein GLCCI1 sp|Q86VQ1|GLCI1_HUMAN Glucocorticoid-induced transcript 1 protein OS=Homo sapiens GN=GLCCI1 PE=1 SV=1 0.982632 17.5271 2.67812E-07 164.59 137.86 164.59 1 S DKDSGSSSPLPKYASSPKPNNSYMFKREPPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX YAS(0.017)S(0.983)PKPNNSYMFK Y(-79.75)AS(-17.53)S(17.53)PKPNNS(-56.33)Y(-102.51)MFK 4 3 0.95946 34928 0 0 21679 0 0 36364 0 0 19753 0 0 11645 0 0 44085 0 0 15674 0 0 30870 0 0 22846 0 0 13234 0 0 33056 0 0 20469 0 0 36239 0 0 20790 0 0 13340 0 0 42962 0 0 15958 0 0 31876 0 0 22238 0 0 13176 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22925000 22925000 0 0 NaN 2508 1382 406 406 5358 5708 6086 6764 6086 6764 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16036 6086 6764 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16036 6086 6764 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16036 Q86VZ1 324 Q86VZ1 Q86VZ1 P2Y purinoceptor 8 P2RY8 sp|Q86VZ1|P2RY8_HUMAN P2Y purinoceptor 8 OS=Homo sapiens GN=P2RY8 PE=1 SV=1 0.999937 42.0381 0.00166264 103.63 78.794 103.63 1 S GCRRVPRDTLDTRRESLFSARTTSVRSEAGA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX RES(1)LFSAR RES(42.04)LFS(-42.04)AR 3 2 -2.3045 78032 0 0 26612 0 0 77553 0 0 32318 0 0 20517 0 0 80792 0 0 16662 0 0 36946 0 0 18052 0 0 18992 0 0 73837 0 0 25172 0 0 77413 0 0 33613 0 0 24135 0 0 78304 0 0 17184 0 0 39331 0 0 17753 0 0 18739 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 34393000 34393000 0 0 NaN 2509 1383 324 324 3226 3421 3656 4054;4055 3656 4055 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11403 3656 4055 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11403 3656 4055 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11403 Q86W50 329 Q86W50 Q86W50 Methyltransferase-like protein 16 METTL16 sp|Q86W50|MET16_HUMAN Methyltransferase-like protein 16 OS=Homo sapiens GN=METTL16 PE=1 SV=2 0.999698 35.1963 0.00192312 95.854 52.557 95.854 1 S FVVLASVMKELSLKASPLRSETAEGIVVVTT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX ELSLKAS(1)PLR ELS(-35.2)LKAS(35.2)PLR 7 3 -0.064873 17447 0 0 16636 0 0 18871 0 0 16155 0 0 11075 0 0 17241 0 0 10267 0 0 15275 0 0 18186 0 0 2252.8 0 0 16515 0 0 15713 0 0 18823 0 0 16635 0 0 11695 0 0 17213 0 0 10707 0 0 15466 0 0 17609 0 0 2474.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 49812000 49812000 0 0 NaN 2510 1384 329 329 1047 1103 1191 1310 1191 1310 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15817 1191 1310 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15817 1191 1310 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15817 Q86W56 137 Q86W56 Q86W56 Poly(ADP-ribose) glycohydrolase PARG sp|Q86W56|PARG_HUMAN Poly(ADP-ribose) glycohydrolase OS=Homo sapiens GN=PARG PE=1 SV=1 0.977478 17.1533 4.68055E-07 146.99 117.35 146.99 1 S NVEKLENVSQLSLDKSPTEKSTQYLNQHQTA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPXXXXXXXXXXX LENVSQLS(0.004)LDKS(0.977)PT(0.019)EK LENVS(-68)QLS(-24.22)LDKS(17.15)PT(-17.15)EK 12 3 0.68866 19328 0 0 27317 0 0 23079 0 0 28363 0 0 14309 0 0 21707 0 0 17884 0 0 23043 0 0 32819 0 0 20901 0 0 18303 0 0 25812 0 0 22923 0 0 28952 0 0 15104 0 0 22111 0 0 18442 0 0 23692 0 0 31749 0 0 20214 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21840000 21840000 0 0 NaN 2511 1385 137 137 2333 2466 2655 2967 2655 2967 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18065 2655 2967 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18065 2655 2967 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18065 Q86W56 291 Q86W56 Q86W56 Poly(ADP-ribose) glycohydrolase PARG sp|Q86W56|PARG_HUMAN Poly(ADP-ribose) glycohydrolase OS=Homo sapiens GN=PARG PE=1 SV=1 0.992231 21.0624 0.0081621 78.021 56.464 78.021 1 S KNDNKLTRQESCLGNSPPFEKESEPESPMDV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPXXXXXXXXXX QES(0.008)CLGNS(0.992)PPFEK QES(-21.06)CLGNS(21.06)PPFEK 8 3 -1.7125 7605.5 0 0 9548.8 0 0 8482 0 0 10042 0 0 7700.4 0 0 7246.2 0 0 7479 0 0 8255.1 0 0 8888.6 0 0 6578.2 0 0 7200 0 0 9023.2 0 0 8480.5 0 0 10236 0 0 7858.8 0 0 7413.1 0 0 7662.3 0 0 8439.6 0 0 8710.6 0 0 6385.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9793800 9793800 0 0 NaN 2512 1385 291 291 3023 3204 3427 3800 3427 3800 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15222 3427 3800 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15222 3427 3800 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15222 Q86W92 601 Q86W92 Q86W92 Liprin-beta-1 PPFIBP1 sp|Q86W92|LIPB1_HUMAN Liprin-beta-1 OS=Homo sapiens GN=PPFIBP1 PE=1 SV=2 0.560515 4.75064 0.012033 68.634 56.678 68.634 1 S SRGIMKLFGKLRRSQSTTFNPDDMSEPEFKR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX S(0.188)QS(0.561)T(0.188)T(0.064)FNPDDMSEPEFK S(-4.75)QS(4.75)T(-4.75)T(-9.42)FNPDDMS(-52.87)EPEFK 3 3 -0.23011 9581.2 0 0 5867.3 0 0 8369.4 0 0 5351.8 0 0 8469.5 0 0 9763.9 0 0 7766.8 0 0 8012.1 0 0 5489.2 0 0 21510 0 0 9061.7 0 0 5539.7 0 0 8497.1 0 0 5597.4 0 0 8576.9 0 0 9608.4 0 0 7877.3 0 0 8752.7 0 0 5512.8 0 0 20440 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10452000 10452000 0 0 NaN 2513 1386 601 601 4250 4529 4828 5359 4828 5359 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18741 4828 5359 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18741 4828 5359 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18741 Q86W92 466 Q86W92 Q86W92 Liprin-beta-1 PPFIBP1 sp|Q86W92|LIPB1_HUMAN Liprin-beta-1 OS=Homo sapiens GN=PPFIBP1 PE=1 SV=2 0.914981 11.5269 0.0227834 63.694 28.516 63.694 1 S QLCDKLLTSSLQKSSSLGNLKKETSDGEKET X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX S(0.021)S(0.064)S(0.915)LGNLK S(-16.47)S(-11.53)S(11.53)LGNLK 3 2 -0.042736 66483 0 0 28668 0 0 66943 0 0 30121 0 0 54426 0 0 69410 0 0 64458 0 0 52128 0 0 30175 0 0 17549 0 0 62912 0 0 27090 0 0 67247 0 0 31470 0 0 56081 0 0 67636 0 0 64192 0 0 53487 0 0 31227 0 0 17731 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 85077000 85077000 0 0 NaN 2514 1386 466 466 4429;4430 4720;4721 5024;5025 5573;5574 5024 5573 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13484 5024 5573 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13484 5024 5573 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13484 Q86WB0 62 Q86WB0 Q86WB0 Nuclear-interacting partner of ALK ZC3HC1 sp|Q86WB0|NIPA_HUMAN Nuclear-interacting partner of ALK OS=Homo sapiens GN=ZC3HC1 PE=1 SV=1 0.998613 28.6585 1.07331E-24 269.81 246.76 269.81 1 S VDAKDTSATSQSVNGSPQAEQPSLESTSKEA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPPPPPPPXX DTSATSQS(0.001)VNGS(0.999)PQAEQPSLESTSK DT(-70)S(-69.78)AT(-54.61)S(-46.24)QS(-28.66)VNGS(28.66)PQAEQPS(-174.7)LES(-189.49)T(-192.64)S(-195.76)K 12 3 -0.056419 7888.3 0 0 13215 0 0 8695.5 0 0 13793 0 0 9217.5 0 0 9075.1 0 0 9414.2 0 0 11365 0 0 15054 0 0 8804.6 0 0 7467.4 0 0 12487 0 0 8716.2 0 0 14051 0 0 9331.2 0 0 9352.3 0 0 9727.8 0 0 11576 0 0 14614 0 0 8553.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 45019000 45019000 0 0 NaN 2515 1387 62 62 830 878 934 1029 934 1029 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11698 934 1029 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11698 934 1029 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11698 Q86WB0 407 Q86WB0 Q86WB0 Nuclear-interacting partner of ALK ZC3HC1 sp|Q86WB0|NIPA_HUMAN Nuclear-interacting partner of ALK OS=Homo sapiens GN=ZC3HC1 PE=1 SV=1 0.459898 0 6.17012E-17 247.95 207.18 247.95 S VPSSPLRKAKRARLCSSSSSDTSSRSFFDPT X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX LCS(0.46)S(0.46)S(0.079)S(0.001)SDTSSR LCS(0)S(0)S(-7.64)S(-26.68)S(-45.23)DT(-73.9)S(-95.73)S(-114.88)R 3 2 -0.18037 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2516 1387 407 407 2306 2436 2625 2935 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7094 2625 2935 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7094 2625 2935 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7094 Q86WB0 408 Q86WB0 Q86WB0 Nuclear-interacting partner of ALK ZC3HC1 sp|Q86WB0|NIPA_HUMAN Nuclear-interacting partner of ALK OS=Homo sapiens GN=ZC3HC1 PE=1 SV=1 0.459898 0 6.17012E-17 247.95 207.18 247.95 S PSSPLRKAKRARLCSSSSSDTSSRSFFDPTS X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LCS(0.46)S(0.46)S(0.079)S(0.001)SDTSSR LCS(0)S(0)S(-7.64)S(-26.68)S(-45.23)DT(-73.9)S(-95.73)S(-114.88)R 4 2 -0.18037 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2517 1387 408 408 2306 2436 2625 2935 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7094 2625 2935 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7094 2625 2935 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7094 Q86WB0 321 Q86WB0 Q86WB0 Nuclear-interacting partner of ALK ZC3HC1 sp|Q86WB0|NIPA_HUMAN Nuclear-interacting partner of ALK OS=Homo sapiens GN=ZC3HC1 PE=1 SV=1 1 66.1038 0.0127518 66.104 38.44 66.104 1 S PGLEGRPERLPLVPESPRRMMTRSQDATFSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX LPLVPES(1)PRR LPLVPES(66.1)PRR 7 3 -0.18799 5688.6 0 0 6663 0 0 6244.8 0 0 7021.5 0 0 5373.5 0 0 5963.1 0 0 5588.7 0 0 5691.3 0 0 7563.6 0 0 1423.1 0 0 5385 0 0 6296.3 0 0 6245.9 0 0 7170.5 0 0 5509.4 0 0 6023.7 0 0 5732.6 0 0 5762.2 0 0 7379.3 0 0 1471.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 243340000 243340000 0 0 NaN 2518 1387 321 321 2501 2640 2834 3162 2834 3162 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15574 2834 3162 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15574 2834 3162 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15574 Q86WB0 24 Q86WB0 Q86WB0 Nuclear-interacting partner of ALK ZC3HC1 sp|Q86WB0|NIPA_HUMAN Nuclear-interacting partner of ALK OS=Homo sapiens GN=ZC3HC1 PE=1 SV=1 0.999903 40.1112 7.99974E-06 137.05 103.75 110.47 1 S AFAVGVEKNWGAVVRSPEGTPQKIRQLIDEG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPXXXXXXXX S(1)PEGTPQK S(40.11)PEGT(-40.11)PQK 1 2 0.017878 57745 0 0 70793 0 0 59645 0 0 70927 0 0 37698 0 0 58686 0 0 35322 0 0 56517 0 0 76784 0 0 17424 0 0 54649 0 0 66876 0 0 59677 0 0 72621 0 0 39558 0 0 59376 0 0 37204 0 0 57300 0 0 74004 0 0 17715 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 77376000 77376000 0 0 NaN 2519 1387 24 24 2964;4090 3143;4361 3365;4651 3730;5164 4651 5164 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7645 3365 3730 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14562 3365 3730 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14562 Q86WB0 394 Q86WB0 Q86WB0 Nuclear-interacting partner of ALK ZC3HC1 sp|Q86WB0|NIPA_HUMAN Nuclear-interacting partner of ALK OS=Homo sapiens GN=ZC3HC1 PE=1 SV=1 0.591462 1.60694 3.96199E-16 239.58 208.62 239.58 1 S TRSMGTGDTPGLEVPSSPLRKAKRARLCSSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X XXPPPPPPPPPPPPPPPPPPXXXXXXXXXXX SMGTGDTPGLEVPS(0.591)S(0.409)PLR S(-164.69)MGT(-127.34)GDT(-74.95)PGLEVPS(1.61)S(-1.61)PLR 14 2 0.96848 7203.5 0 0 9421.5 0 0 7386.8 0 0 10275 0 0 6901.4 0 0 8920.5 0 0 5898 0 0 8096.9 0 0 9365.8 0 0 16859 0 0 6817.1 0 0 8905 0 0 7419.7 0 0 10477 0 0 7021.3 0 0 9023.3 0 0 6146.8 0 0 8661.7 0 0 9094.1 0 0 16063 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27771000 27771000 0 0 NaN 2520 1387 394 394 4030;4031 4297;4298;4299 4585 5093 4585 5093 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17559 4585 5093 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17559 4585 5093 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17559 Q86WB0 395 Q86WB0 Q86WB0 Nuclear-interacting partner of ALK ZC3HC1 sp|Q86WB0|NIPA_HUMAN Nuclear-interacting partner of ALK OS=Homo sapiens GN=ZC3HC1 PE=1 SV=1 0.919755 10.5926 8.2268E-17 246.32 207.96 168.12 1 S RSMGTGDTPGLEVPSSPLRKAKRARLCSSSS X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX SMGTGDTPGLEVPS(0.08)S(0.92)PLRK S(-123.26)MGT(-118.46)GDT(-90.55)PGLEVPS(-10.59)S(10.59)PLRK 15 3 0.6198 49103 0 0 75477 0 0 56998 0 0 76113 0 0 49022 0 0 58173 0 0 47839 0 0 64797 0 0 84289 0 0 31972 0 0 46493 0 0 71304 0 0 56840 0 0 77823 0 0 50236 0 0 59253 0 0 49751 0 0 65703 0 0 81622 0 0 31605 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 650440000 650440000 0 0 NaN 2521 1387 395 395 4030;4031 4297;4298;4299 4586;4587 5094;5095 4586 5094 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15441 4587 5095 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16827 4587 5095 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16827 Q86WB0 344 Q86WB0 Q86WB0 Nuclear-interacting partner of ALK ZC3HC1 sp|Q86WB0|NIPA_HUMAN Nuclear-interacting partner of ALK OS=Homo sapiens GN=ZC3HC1 PE=1 SV=1 0.999999 58.9367 1.0836E-17 224.01 197.51 77.072 1 S SQDATFSPGSEQAEKSPGPIVSRTRSWDSSS Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPXXXXXXXX S(1)PGPIVSR S(58.94)PGPIVS(-58.94)R 1 2 0.38277 33978 0 0 44858 0 0 33154 0 0 44809 0 0 22163 0 0 36636 0 0 23369 0 0 35247 0 0 47922 0 0 12214 0 0 32149 0 0 42375 0 0 33300 0 0 45880 0 0 23181 0 0 37092 0 0 24402 0 0 35777 0 0 46243 0 0 12317 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 52224000 52224000 0 0 NaN 2522 1387 344 344 4109;4217 4381;4495 4671;4791 5186;5317 4671 5186 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9340 4791 5317 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13357 4791 5317 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13357 Q86WB0 329 Q86WB0 Q86WB0 Nuclear-interacting partner of ALK ZC3HC1 sp|Q86WB0|NIPA_HUMAN Nuclear-interacting partner of ALK OS=Homo sapiens GN=ZC3HC1 PE=1 SV=1 0.974398 15.8049 6.86884E-05 123.43 85.882 123.43 1 S RLPLVPESPRRMMTRSQDATFSPGSEQAEKS X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY) XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPX S(0.974)QDAT(0.026)FSPGSEQAEK S(15.8)QDAT(-15.8)FS(-58.39)PGS(-96.17)EQAEK 1 3 -0.099719 12437 0 0 16047 0 0 12272 0 0 16560 0 0 17872 0 0 12552 0 0 18746 0 0 14298 0 0 17163 0 0 6369.1 0 0 11768 0 0 15162 0 0 12437 0 0 16907 0 0 17817 0 0 12795 0 0 18997 0 0 14467 0 0 17002 0 0 6328.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9689600 9689600 0 0 NaN 2523 1387 329 329 4216;4217 4494;4495 4790 5316 4790 5316 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11937 4790 5316 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11937 4790 5316 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11937 Q86WC4 322 Q86WC4 Q86WC4 Osteopetrosis-associated transmembrane protein 1 OSTM1 sp|Q86WC4|OSTM1_HUMAN Osteopetrosis-associated transmembrane protein 1 OS=Homo sapiens GN=OSTM1 PE=1 SV=1 0.650905 4.19803 1.41311E-22 259.58 248.79 68.134 1;2 S SEQKKRKLILPKRLKSSTSFANIQENSN___ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPXXX RLKS(0.651)S(0.474)T(0.393)S(0.367)FANIQENS(0.115)N RLKS(4.2)S(2.72)T(-2.72)S(-3.6)FANIQENS(-8.52)N 4 3 0.31236 19709 15258 0 23138 13555 0 18619 14724 0 22603 15776 0 16909 14267 0 18164 16963 0 18082 12797 0 21598 14422 0 22685 16107 0 21913 10584 0 18646 14436 0 21855 12817 0 18792 14848 0 23170 16082 0 17281 14488 0 18489 16938 0 18475 13188 0 22191 14884 0 22188 15753 0 21134 10300 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 53821000 37523000 16298000 0 NaN 2524 1388 322 322 2422;3314;4484 2560;3515;3516;4776 2754;3752;3753 3076;4168;4169 3753 4169 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14493 2754 3076 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16188 2754 3076 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16188 Q86WC4 323 Q86WC4 Q86WC4 Osteopetrosis-associated transmembrane protein 1 OSTM1 sp|Q86WC4|OSTM1_HUMAN Osteopetrosis-associated transmembrane protein 1 OS=Homo sapiens GN=OSTM1 PE=1 SV=1 0.474494 2.71808 0.0147749 68.134 56.111 68.134 S EQKKRKLILPKRLKSSTSFANIQENSN____ X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPXXXX RLKS(0.651)S(0.474)T(0.393)S(0.367)FANIQENS(0.115)N RLKS(4.2)S(2.72)T(-2.72)S(-3.6)FANIQENS(-8.52)N 5 3 0.31236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2525 1388 323 323 2422;3314;4484 2560;3515;3516;4776 3753 4169 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14493 3753 4169 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14493 3753 4169 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14493 Q86WC4 325 Q86WC4 Q86WC4 Osteopetrosis-associated transmembrane protein 1 OSTM1 sp|Q86WC4|OSTM1_HUMAN Osteopetrosis-associated transmembrane protein 1 OS=Homo sapiens GN=OSTM1 PE=1 SV=1 0.757849 6.55939 1.31124E-07 171.54 149.99 171.54 1 S KKRKLILPKRLKSSTSFANIQENSN______ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX S(0.037)S(0.037)T(0.167)S(0.758)FANIQENSN S(-13.07)S(-13.07)T(-6.56)S(6.56)FANIQENS(-117.34)N 4 2 -3.8257 19793 0 0 16816 0 0 19200 0 0 17893 0 0 16748 0 0 20100 0 0 16634 0 0 18925 0 0 19151 0 0 16011 0 0 18727 0 0 15892 0 0 19337 0 0 18342 0 0 17142 0 0 20064 0 0 17006 0 0 19511 0 0 18790 0 0 15514 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30169000 30169000 0 0 NaN 2526 1388 325 325 2422;3314;4484 2560;3515;3516;4776 5086 5645 5086 5645 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13046 5086 5645 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13046 5086 5645 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13046 Q86WG5 683 Q86WG5 Q86WG5 Myotubularin-related protein 13 SBF2 sp|Q86WG5|MTMRD_HUMAN Myotubularin-related protein 13 OS=Homo sapiens GN=SBF2 PE=1 SV=1 0.936696 11.5582 0.030028 57.047 16.98 57.047 2 S FWETTFYNAVQEQVRSLYLSAKEDNHAPHLK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX S(0.937)LY(0.97)LS(0.094)AK S(11.56)LY(14.74)LS(-11.56)AK 1 2 1.4346 0 19658 0 0 33663 0 0 19337 0 0 33435 0 0 84647 0 0 19521 0 0 84920 0 0 45892 0 0 33406 0 0 3600.8 0 0 18600 0 0 31799 0 0 20289 0 0 34120 0 0 81999 0 0 20525 0 0 85018 0 0 45119 0 0 35147 0 0 4452.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 128740000 0 128740000 0 NaN 2527 1389 683 683 4024 4289 4577 5085 4577 5085 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8997 4577 5085 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8997 4577 5085 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8997 Q86WJ1 628 Q86WJ1 Q86WJ1 Chromodomain-helicase-DNA-binding protein 1-like CHD1L sp|Q86WJ1|CHD1L_HUMAN Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens GN=CHD1L PE=1 SV=2 0.933312 11.4599 0.0140797 68.168 46.611 68.168 1 S LRNKGSVLIPGLVEGSTKRKRVLSPEELEDR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX GSVLIPGLVEGS(0.933)T(0.067)KR GS(-61.86)VLIPGLVEGS(11.46)T(-11.46)KR 12 3 -0.61964 9977.2 0 0 3358.3 0 0 10133 0 0 3235.9 0 0 5249 0 0 10871 0 0 5566.9 0 0 5857 0 0 4346.6 0 0 7681.4 0 0 9441.6 0 0 3171.8 0 0 10136 0 0 3452.7 0 0 5618.5 0 0 10507 0 0 5617.9 0 0 6300.7 0 0 4340.5 0 0 7368.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8067200 8067200 0 0 NaN 2528 1390 628 628 1644 1732 1871 2084 1871 2084 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19230 1871 2084 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19230 1871 2084 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19230 Q86WJ1 607 Q86WJ1 Q86WJ1 Chromodomain-helicase-DNA-binding protein 1-like CHD1L sp|Q86WJ1|CHD1L_HUMAN Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens GN=CHD1L PE=1 SV=2 0.997938 26.8482 0.0107671 67.326 47.219 67.326 1 S FEQLVNLQKTLLEKASQEGRSLRNKGSVLIP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX T(0.002)LLEKAS(0.998)QEGR T(-26.85)LLEKAS(26.85)QEGR 7 3 -0.69051 7638.5 0 0 6420.2 0 0 7841.5 0 0 6982 0 0 18795 0 0 7013.8 0 0 17773 0 0 9797.9 0 0 6487.9 0 0 2777.1 0 0 7228.7 0 0 6068.2 0 0 8016.4 0 0 7135.1 0 0 18402 0 0 7068.9 0 0 17831 0 0 9803.7 0 0 6880.3 0 0 2841.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15773000 15773000 0 0 NaN 2529 1390 607 607 4774 5091 5424 6032 5424 6032 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13279 5424 6032 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13279 5424 6032 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13279 Q86WP2 381 Q86WP2 Q86WP2 Vasculin GPBP1 sp|Q86WP2|GPBP1_HUMAN Vasculin OS=Homo sapiens GN=GPBP1 PE=1 SV=1 0.929543 11.2769 2.64146E-11 198.83 171.92 198.83 1 S IIRSSTFPQTDVLSSSLEAEHRLLKEMGWQE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPXXXXXXXXX SSTFPQTDVLS(0.001)S(0.069)S(0.93)LEAEHR S(-162.33)S(-162.33)T(-158.13)FPQT(-111.02)DVLS(-28.96)S(-11.28)S(11.28)LEAEHR 13 3 -1.4272 6646 0 0 5716.6 0 0 4839.5 0 0 6314.1 0 0 8551.5 0 0 4887 0 0 8983.4 0 0 7091 0 0 6155.5 0 0 16750 0 0 6282 0 0 5403.7 0 0 5023.3 0 0 6423.8 0 0 8462.4 0 0 5021.3 0 0 9046.1 0 0 7532.1 0 0 6193.6 0 0 15936 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25675000 25675000 0 0 NaN 2530 1391 381 381 4479 4771 5078 5635 5078 5635 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15914 5078 5635 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15914 5078 5635 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15914 Q86WR7 179 Q86WR7 Q86WR7 Proline and serine-rich protein 2 PROSER2 sp|Q86WR7|PRSR2_HUMAN Proline and serine-rich protein 2 OS=Homo sapiens GN=PROSER2 PE=1 SV=2 1 83.2035 0.00580001 83.204 71.49 83.204 1 S LPSTPDPPRRELRAPSPPVEHPRLLRSVPTP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX APS(1)PPVEHPR APS(83.2)PPVEHPR 3 3 0.71686 15950 0 0 14685 0 0 16605 0 0 18139 0 0 10655 0 0 27619 0 0 12402 0 0 14646 0 0 10249 0 0 2519.2 0 0 15095 0 0 13892 0 0 16613 0 0 18566 0 0 11186 0 0 27102 0 0 12481 0 0 15269 0 0 10204 0 0 2711.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7880800 7880800 0 0 NaN 2531 1392 179 179 373 399 434 482 434 482 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7941 434 482 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7941 434 482 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7941 Q86WR7 311 Q86WR7 Q86WR7 Proline and serine-rich protein 2 PROSER2 sp|Q86WR7|PRSR2_HUMAN Proline and serine-rich protein 2 OS=Homo sapiens GN=PROSER2 PE=1 SV=2 0.563894 1.11606 3.55988E-05 110.9 99.154 110.9 1 S FPAAGDAGEGAPGGGSSPERVARGRGLPGPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX AQVLATIHGHAGAFPAAGDAGEGAPGGGS(0.564)S(0.436)PER AQVLAT(-103.15)IHGHAGAFPAAGDAGEGAPGGGS(1.12)S(-1.12)PER 29 4 -3.144 11145 0 0 12457 0 0 10310 0 0 9865.9 0 0 7876.3 0 0 10082 0 0 9255.3 0 0 9808.6 0 0 10806 0 0 26859 0 0 10543 0 0 11753 0 0 10402 0 0 10292 0 0 8157.6 0 0 10143 0 0 9397.3 0 0 10659 0 0 10596 0 0 25518 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25409000 25409000 0 0 NaN 2532 1392 311 311 413 442 477 531 477 531 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15862 477 531 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15862 477 531 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15862 Q86WR7 18 Q86WR7 Q86WR7 Proline and serine-rich protein 2 PROSER2 sp|Q86WR7|PRSR2_HUMAN Proline and serine-rich protein 2 OS=Homo sapiens GN=PROSER2 PE=1 SV=2 0.88557 9.02112 0.00127429 98.684 80.589 98.684 1 S VTHRKSDASDMNSDTSPSCRLRAFSRGGSLE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPXXXXXXXXXXX KSDASDMNS(0.001)DT(0.111)S(0.886)PS(0.002)CR KS(-76.31)DAS(-56.51)DMNS(-28.92)DT(-9.02)S(9.02)PS(-25.77)CR 12 3 -1.6399 10617 0 0 10729 0 0 10456 0 0 11462 0 0 6435.5 0 0 10111 0 0 6491.9 0 0 10931 0 0 12021 0 0 2343.7 0 0 10046 0 0 10140 0 0 10489 0 0 11703 0 0 6774.1 0 0 10209 0 0 6756.8 0 0 11004 0 0 11626 0 0 2459.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8124200 8124200 0 0 NaN 2533 1392 18 18 2208 2334 2515 2808 2515 2808 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7030 2515 2808 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7030 2515 2808 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7030 Q86X27 329 Q86X27 Q86X27 Ras-specific guanine nucleotide-releasing factor RalGPS2 RALGPS2 sp|Q86X27|RGPS2_HUMAN Ras-specific guanine nucleotide-releasing factor RalGPS2 OS=Homo sapiens GN=RALGPS2 PE=1 SV=1 0.713176 3.95976 0.0487275 43.64 12.178 43.64 1 S KSVAAEGALLPQTPPSPRNLIPHGHRKCHSL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX SVAAEGALLPQT(0.287)PPS(0.713)PR S(-34.39)VAAEGALLPQT(-3.96)PPS(3.96)PR 15 3 -1.0609 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2534 1394 329 329 4544 4846 5163 5733 5163 5733 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16621 5163 5733 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16621 5163 5733 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16621 Q86X29 464 Q86X29 Q86X29 Lipolysis-stimulated lipoprotein receptor LSR sp|Q86X29|LSR_HUMAN Lipolysis-stimulated lipoprotein receptor OS=Homo sapiens GN=LSR PE=1 SV=4 1 79.7161 0.00327018 92.518 72.778 92.518 1 S GPALTPIRDEEWGGHSPRSPRGWDQEPAREQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX GPALTPIRDEEWGGHS(1)PR GPALT(-79.72)PIRDEEWGGHS(79.72)PR 16 3 -1.1951 10346 0 0 24246 0 0 13753 0 0 23558 0 0 8769.8 0 0 12543 0 0 7418.8 0 0 14099 0 0 25501 0 0 10063 0 0 9803 0 0 22900 0 0 13589 0 0 24054 0 0 9191.9 0 0 13103 0 0 8111.8 0 0 14385 0 0 24395 0 0 9801.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25125000 25125000 0 0 NaN 2535 1395 464 464 1538 1620 1749 1942 1749 1942 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14270 1749 1942 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14270 1749 1942 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14270 Q86X29 643 Q86X29 Q86X29 Lipolysis-stimulated lipoprotein receptor LSR sp|Q86X29|LSR_HUMAN Lipolysis-stimulated lipoprotein receptor OS=Homo sapiens GN=LSR PE=1 SV=4 0.998109 27.2244 0.00744076 86.262 71.251 86.262 1 S SQASRERRLKKNLALSRESLVV_________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX NLALS(0.998)RES(0.002)LVV NLALS(27.22)RES(-27.22)LVV 5 2 1.0617 5718.2 0 0 27097 0 0 6820.1 0 0 26224 0 0 6963 0 0 5925.1 0 0 5723.6 0 0 14320 0 0 29717 0 0 13151 0 0 5415 0 0 25592 0 0 6803.5 0 0 26653 0 0 7062.8 0 0 6975 0 0 6542.7 0 0 14435 0 0 28304 0 0 12714 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24538000 24538000 0 0 NaN 2536 1395 643 643 2843 3013 3227 3582 3227 3582 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20139 3227 3582 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20139 3227 3582 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20139 Q86XL3 268 Q86XL3 Q86XL3 Ankyrin repeat and LEM domain-containing protein 2 ANKLE2 sp|Q86XL3|ANKL2_HUMAN Ankyrin repeat and LEM domain-containing protein 2 OS=Homo sapiens GN=ANKLE2 PE=1 SV=4 0.999841 39.8091 0.000281191 123.67 86.115 123.67 1 S ICDYFPSPSKTSLPLSPVKTAPLFSNDRLKD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX TSLPLS(1)PVK T(-39.81)S(-42.65)LPLS(39.81)PVK 6 2 0.34222 16040 0 0 17342 0 0 17049 0 0 15955 0 0 18211 0 0 16745 0 0 15755 0 0 17910 0 0 16819 0 0 17133 0 0 15182 0 0 16374 0 0 17119 0 0 16479 0 0 18378 0 0 16796 0 0 16184 0 0 18436 0 0 16550 0 0 16547 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17334000 17334000 0 0 NaN 2537 1396 268 268 4924 5249 5592 6214 5592 6214 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17264 5592 6214 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17264 5592 6214 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17264 Q86XN7 613 Q86XN7 Q86XN7 Proline and serine-rich protein 1 PROSER1 sp|Q86XN7|PRSR1_HUMAN Proline and serine-rich protein 1 OS=Homo sapiens GN=PROSER1 PE=1 SV=2 0.923468 13.699 0.0144321 75.479 36.46 75.479 1 S PAATTLPVMIKTEPTSPTPSAFKGPSHSGNP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX T(0.002)EPT(0.019)S(0.923)PT(0.039)PS(0.016)AFK T(-26.91)EPT(-16.8)S(13.7)PT(-13.7)PS(-17.62)AFK 5 2 0.070617 5055.9 0 0 15427 0 0 5757.7 0 0 14699 0 0 11833 0 0 6903.5 0 0 11499 0 0 11185 0 0 17750 0 0 13695 0 0 4786.8 0 0 14569 0 0 5831.1 0 0 15011 0 0 11651 0 0 7347.1 0 0 11893 0 0 11466 0 0 17249 0 0 13154 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9944400 9944400 0 0 NaN 2538 1397 613 613 4689 5000 5326 5918 5326 5918 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13941 5326 5918 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13941 5326 5918 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13941 Q86XP3 96 Q86XP3 Q86XP3 ATP-dependent RNA helicase DDX42 DDX42 sp|Q86XP3|DDX42_HUMAN ATP-dependent RNA helicase DDX42 OS=Homo sapiens GN=DDX42 PE=1 SV=1 0.832681 6.96933 4.69253E-35 311.24 299.35 311.24 1 S EDSSNVDLPYIPAENSPTRQQFHSKPVDSDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX RANFDEENAYFEDEEEDSSNVDLPYIPAENS(0.833)PT(0.167)R RANFDEENAY(-267.82)FEDEEEDS(-168.07)S(-160.61)NVDLPY(-77.88)IPAENS(6.97)PT(-6.97)R 31 4 -0.24582 4649 0 0 3584.9 0 0 4504.6 0 0 4031.1 0 0 6022.7 0 0 6012.1 0 0 5033.4 0 0 7471 0 0 5625.5 0 0 106590 0 0 4398.6 0 0 3389.1 0 0 4560.9 0 0 4143.6 0 0 6008.8 0 0 6156.9 0 0 5187.3 0 0 10649 0 0 5525.6 0 0 100540 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 118600000 118600000 0 0 NaN 2539 1398 96 96 343;3182 369;3375 398;399;3607 439;440;3997;3998 3607 3998 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20218 3607 3998 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20218 3607 3998 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20218 Q86Y82 142 Q86Y82 Q86Y82 Syntaxin-12 STX12 sp|Q86Y82|STX12_HUMAN Syntaxin-12 OS=Homo sapiens GN=STX12 PE=1 SV=1 0.999093 30.4198 0.000218621 118.76 89.96 118.76 1 S KEKESIARARAGSRLSAEERQREEQLVSFDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX AGS(0.001)RLS(0.999)AEER AGS(-30.42)RLS(30.42)AEER 6 2 0.44719 10779 0 0 17265 0 0 11010 0 0 18589 0 0 12198 0 0 10522 0 0 10911 0 0 14658 0 0 18477 0 0 5018.4 0 0 10201 0 0 16317 0 0 11086 0 0 18876 0 0 12297 0 0 10968 0 0 11376 0 0 14694 0 0 17910 0 0 5064.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 82793000 82793000 0 0 NaN 2540 1399 142 142 230 244 262 293 262 293 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6310 262 293 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6310 262 293 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6310 Q86Y91 674 Q86Y91 Q86Y91 Kinesin-like protein KIF18B KIF18B sp|Q86Y91|KI18B_HUMAN Kinesin-like protein KIF18B OS=Homo sapiens GN=KIF18B PE=1 SV=3 0.999361 31.9452 3.1008E-11 205.13 183.9 205.13 1 S TKRQRQSFLPCLRRGSLPDTQPSQGPSTPKG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX RGS(0.999)LPDT(0.001)QPSQGPSTPK RGS(31.95)LPDT(-31.95)QPS(-63.35)QGPS(-154.93)T(-171.71)PK 3 3 1.9392 20319 0 0 15484 0 0 23563 0 0 14395 0 0 15749 0 0 20158 0 0 17271 0 0 18474 0 0 17248 0 0 6461.3 0 0 19239 0 0 14621 0 0 23448 0 0 14940 0 0 16465 0 0 19939 0 0 17507 0 0 18790 0 0 17019 0 0 6511.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26320000 26320000 0 0 NaN 2541 1400 674 674 3253 3450 3686 4089 3686 4089 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9764 3686 4089 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9764 3686 4089 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9764 Q86YD1 36 Q86YD1 Q86YD1 Prostate tumor-overexpressed gene 1 protein PTOV1 sp|Q86YD1|PTOV1_HUMAN Prostate tumor-overexpressed gene 1 protein OS=Homo sapiens GN=PTOV1 PE=1 SV=1 0.946333 12.4634 0.000269964 114.02 77.044 114.02 1 S GRPPRPLVVRAVRSRSWPASPRGPQPPRIRA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX S(0.054)RS(0.946)WPASPR S(-12.46)RS(12.46)WPAS(-76.78)PR 3 3 0.15424 14878 0 0 14034 0 0 13871 0 0 16836 0 0 13377 0 0 14378 0 0 12495 0 0 14882 0 0 14114 0 0 1747.6 0 0 14075 0 0 13274 0 0 14017 0 0 17076 0 0 13593 0 0 14531 0 0 12805 0 0 14961 0 0 13857 0 0 1990 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15204000 15204000 0 0 NaN 2542 1401 36 36 4309 4594 4895 5438 4895 5438 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8814 4895 5438 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8814 4895 5438 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8814 Q86YP4 340 Q86YP4 Q86YP4 Transcriptional repressor p66-alpha GATAD2A sp|Q86YP4|P66A_HUMAN Transcriptional repressor p66-alpha OS=Homo sapiens GN=GATAD2A PE=1 SV=1 0.961995 14.0424 2.74833E-12 204.48 184.05 204.48 1 S NSTPTSVASVVTSAESPASRQAAAKLALRKQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX GTTATSAQANSTPTSVASVVTSAES(0.962)PAS(0.038)R GT(-174.93)T(-171.96)AT(-165.66)S(-161.83)AQANS(-141.64)T(-136.17)PT(-126.49)S(-110.13)VAS(-76.77)VVT(-52.19)S(-41.17)AES(14.04)PAS(-14.04)R 25 3 0.45254 2514.6 0 0 3482.7 0 0 3033.9 0 0 3613.9 0 0 2392 0 0 3103 0 0 2783.3 0 0 3398.2 0 0 3639.6 0 0 8767.5 0 0 2381.4 0 0 3290.7 0 0 3018 0 0 3694.4 0 0 2471.7 0 0 3153.3 0 0 2837.8 0 0 3661.3 0 0 3554.8 0 0 8334.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 65089000 65089000 0 0 NaN 2543 1402 340 340 1665 1756 1898 2116 1898 2116 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15450 1898 2116 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15450 1898 2116 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15450 Q86YP4 100 Q86YP4 Q86YP4 Transcriptional repressor p66-alpha GATAD2A sp|Q86YP4|P66A_HUMAN Transcriptional repressor p66-alpha OS=Homo sapiens GN=GATAD2A PE=1 SV=1 0.999942 42.3665 1.72705E-07 141.78 120.18 141.78 1 S MRTSHSDMKSERRPPSPDVIVLSDNEQPSSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP RPPS(1)PDVIVLSDNEQPSSPR RPPS(42.37)PDVIVLS(-42.37)DNEQPS(-78.29)S(-76.75)PR 4 3 -1.3802 7683.5 0 0 8091.4 0 0 8258.2 0 0 8625.3 0 0 12100 0 0 7801.5 0 0 11315 0 0 10031 0 0 8803.3 0 0 14636 0 0 7272.7 0 0 7646.7 0 0 8328 0 0 8810.3 0 0 12038 0 0 7912.1 0 0 11487 0 0 10416 0 0 8792.7 0 0 14013 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16396000 16396000 0 0 NaN 2544 1402 100 100 3398 3610 3851 4276 3851 4276 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15278 3851 4276 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15278 3851 4276 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15278 Q86YS7 260 Q86YS7 Q86YS7 C2 domain-containing protein 5 C2CD5 sp|Q86YS7|C2CD5_HUMAN C2 domain-containing protein 5 OS=Homo sapiens GN=C2CD5 PE=1 SV=1 0.970419 15.1595 4.97259E-07 145.52 129.58 145.52 1 S LDKLSSPAAFLPACNSPSKEMKEIPFNEDPN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPXXXXXXXXXXXX LSSPAAFLPACNS(0.97)PS(0.03)K LS(-123.68)S(-123.98)PAAFLPACNS(15.16)PS(-15.16)K 13 3 0.18459 12510 0 0 5743.4 0 0 14322 0 0 7613.9 0 0 6026.3 0 0 12223 0 0 6344.3 0 0 10152 0 0 6846.1 0 0 12253 0 0 11844 0 0 5436.2 0 0 14217 0 0 7777.6 0 0 6610.3 0 0 12043 0 0 6456.4 0 0 10633 0 0 6733.7 0 0 11773 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 82408000 82408000 0 0 NaN 2545 1403 260 260 2593 2739 2938 3272 2938 3272 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20480 2938 3272 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20480 2938 3272 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20480 Q86YS7 295 Q86YS7 Q86YS7 C2 domain-containing protein 5 C2CD5 sp|Q86YS7|C2CD5_HUMAN C2 domain-containing protein 5 OS=Homo sapiens GN=C2CD5 PE=1 SV=1 0.992874 22.4953 3.91374E-06 139.7 96.917 139.7 1 S SSGPSTPLKNQTYSFSPSKSYSRQSSSSDTD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX NQT(0.001)YS(0.006)FS(0.993)PS(0.001)K NQT(-31.46)Y(-80.79)S(-22.5)FS(22.5)PS(-30.79)K 7 2 0.73504 74502 0 0 30796 0 0 77060 0 0 27194 0 0 29457 0 0 76900 0 0 34113 0 0 42213 0 0 27216 0 0 23762 0 0 70507 0 0 29071 0 0 76874 0 0 28941 0 0 32763 0 0 74472 0 0 34312 0 0 44403 0 0 27146 0 0 23352 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37561000 37561000 0 0 NaN 2546 1403 295 295 2900 3074 3292 3649 3292 3649 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13588 3292 3649 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13588 3292 3649 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13588 Q86YS7 305 Q86YS7 Q86YS7 C2 domain-containing protein 5 C2CD5 sp|Q86YS7|C2CD5_HUMAN C2 domain-containing protein 5 OS=Homo sapiens GN=C2CD5 PE=1 SV=1 0.655758 6.70768 1.96019E-10 177.6 146.16 177.6 1 S QTYSFSPSKSYSRQSSSSDTDLSLTPKTGMG X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX QS(0.14)S(0.656)S(0.14)S(0.059)DT(0.005)DLSLTPK QS(-6.71)S(6.71)S(-6.71)S(-10.46)DT(-20.92)DLS(-105.01)LT(-141.72)PK 3 3 3.5137 21141 0 0 13279 0 0 20631 0 0 15731 0 0 17213 0 0 23241 0 0 16386 0 0 19681 0 0 14571 0 0 9040.3 0 0 20003 0 0 12558 0 0 20761 0 0 16123 0 0 17656 0 0 22933 0 0 16670 0 0 20152 0 0 14454 0 0 8968 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 15781000 15781000 0 0 NaN 2547 1403 305 305 3149 3340 3571 3960;3961 3571 3960 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14840 3571 3960 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14840 3571 3960 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14840 Q86YS7 323 Q86YS7 Q86YS7 C2 domain-containing protein 5 C2CD5 sp|Q86YS7|C2CD5_HUMAN C2 domain-containing protein 5 OS=Homo sapiens GN=C2CD5 PE=1 SV=1 0.951625 13.3719 0.0102038 82.202 56.264 82.202 1 S DTDLSLTPKTGMGSGSAGKEGGPFKALLRQQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX T(0.005)GMGS(0.044)GS(0.952)AGK T(-23.16)GMGS(-13.37)GS(13.37)AGK 7 2 -0.36238 36036 0 0 22700 0 0 36296 0 0 20548 0 0 22249 0 0 36723 0 0 22513 0 0 29155 0 0 23859 0 0 4977.4 0 0 34101 0 0 21431 0 0 36362 0 0 21489 0 0 23413 0 0 36002 0 0 22941 0 0 29688 0 0 23484 0 0 5361.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24864000 24864000 0 0 NaN 2548 1403 323 323 4722 5033 5362 5963 5362 5963 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8214 5362 5963 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8214 5362 5963 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8214 Q86YV0 51 Q86YV0 Q86YV0 RAS protein activator like-3 RASAL3 sp|Q86YV0|RASL3_HUMAN RAS protein activator like-3 OS=Homo sapiens GN=RASAL3 PE=1 SV=2 1 107.643 1.8859E-11 208.87 192.56 208.87 1 S GGFRWGRFAGWGRALSHQEPMVSTQPAPRSI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX ALS(1)HQEPMVSTQPAPR ALS(107.64)HQEPMVS(-107.64)T(-116.94)QPAPR 3 3 0.4989 19138 0 0 9539.3 0 0 18632 0 0 8914.1 0 0 19091 0 0 18801 0 0 22796 0 0 16580 0 0 10196 0 0 9237.5 0 0 18108 0 0 9007.9 0 0 18803 0 0 9349.8 0 0 19387 0 0 18394 0 0 22681 0 0 16995 0 0 10595 0 0 9082 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 139020000 139020000 0 0 NaN 2549 1404 51 51 311 332 353 393 353 393 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10846 353 393 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10846 353 393 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10846 Q86YV0 988 Q86YV0 Q86YV0 RAS protein activator like-3 RASAL3 sp|Q86YV0|RASL3_HUMAN RAS protein activator like-3 OS=Homo sapiens GN=RASAL3 PE=1 SV=2 0.986305 18.5746 0.0466275 52.24 24.072 52.24 1 S RTQAQLRDAVQSLQLSPRTRGSWSQPQPLKA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX DAVQS(0.014)LQLS(0.986)PR DAVQS(-18.57)LQLS(18.57)PR 9 2 2.0412 9786.5 0 0 7812.3 0 0 10327 0 0 7254.2 0 0 10051 0 0 9157.9 0 0 9374.2 0 0 7988.3 0 0 7793.6 0 0 8502.4 0 0 9262.5 0 0 7376.9 0 0 10363 0 0 7513.1 0 0 10205 0 0 9095.8 0 0 9531.4 0 0 8314.4 0 0 7757 0 0 8190.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 72097000 72097000 0 0 NaN 2550 1404 988 988 649 691 736 816 736 816 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14779 736 816 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14779 736 816 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14779 Q86YV0 228 Q86YV0 Q86YV0 RAS protein activator like-3 RASAL3 sp|Q86YV0|RASL3_HUMAN RAS protein activator like-3 OS=Homo sapiens GN=RASAL3 PE=1 SV=2 0.999973 45.6803 4.02574E-18 240.19 217.87 71.268 1 S KARLEPRDGPPSALGSRESLATLSELDLGAE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPPPPPP DGPPSALGS(1)R DGPPS(-45.68)ALGS(45.68)R 9 2 -0.24179 28905 0 0 16655 0 0 31517 0 0 16974 0 0 38395 0 0 32497 0 0 38912 0 0 29084 0 0 15705 0 0 65312 0 0 27361 0 0 15735 0 0 31671 0 0 17658 0 0 38543 0 0 31961 0 0 38949 0 0 31273 0 0 16481 0 0 62172 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 103180000 103180000 0 0 NaN 2551 1404 228 228 684;685 728;729 776;777 858;859 776 858 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9153 777 859 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21288 777 859 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21288 Q86YV0 72 Q86YV0 Q86YV0 RAS protein activator like-3 RASAL3 sp|Q86YV0|RASL3_HUMAN RAS protein activator like-3 OS=Homo sapiens GN=RASAL3 PE=1 SV=2 1 57.5496 0.0148554 65.241 33.81 57.55 1 S VSTQPAPRSIFRRVLSAPPKESRTSRLRLSK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX VLS(1)APPK VLS(57.55)APPK 3 2 -0.38794 55350 0 0 21523 0 0 50173 0 0 22497 0 0 47628 0 0 52506 0 0 53067 0 0 40688 0 0 23041 0 0 7288.3 0 0 52356 0 0 20337 0 0 50798 0 0 23522 0 0 48532 0 0 51155 0 0 52935 0 0 41491 0 0 24008 0 0 7804.4 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 62693000 62693000 0 0 NaN 2552 1404 72 72 3545;5170 3763;5509 4009;5871 4450;6525 5871 6525 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14070 4009 4450 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11180 4009 4450 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11180 Q86YV0 819 Q86YV0 Q86YV0 RAS protein activator like-3 RASAL3 sp|Q86YV0|RASL3_HUMAN RAS protein activator like-3 OS=Homo sapiens GN=RASAL3 PE=1 SV=2 0.928369 11.1262 0.0228653 66.19 23.107 66.19 1 S EERPLRRPRPVQRTQSVPVRRPARRRQSAGP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX T(0.072)QS(0.928)VPVR T(-11.13)QS(11.13)VPVR 3 2 0.88523 36721 0 0 11777 0 0 39881 0 0 13622 0 0 30428 0 0 41768 0 0 32813 0 0 28871 0 0 14062 0 0 537.59 0 0 34759 0 0 11136 0 0 39865 0 0 14327 0 0 31453 0 0 40450 0 0 32773 0 0 29475 0 0 14670 0 0 1174.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 43292000 43292000 0 0 NaN 2553 1404 819 819 4887 5212 5552 6171 5552 6171 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7844 5552 6171 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7844 5552 6171 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7844 Q86YV0 994 Q86YV0 Q86YV0 RAS protein activator like-3 RASAL3 sp|Q86YV0|RASL3_HUMAN RAS protein activator like-3 OS=Homo sapiens GN=RASAL3 PE=1 SV=2 0.852607 8.05038 6.20069E-05 123.36 99.53 123.36 1 S RDAVQSLQLSPRTRGSWSQPQPLKAPCLNGD X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX T(0.134)RGS(0.853)WS(0.014)QPQPLK T(-8.05)RGS(8.05)WS(-17.9)QPQPLK 4 3 0.30848 10758 0 0 6577.6 0 0 11247 0 0 6946.1 0 0 16339 0 0 11997 0 0 16384 0 0 12034 0 0 7871.2 0 0 5134.1 0 0 10182 0 0 6215.7 0 0 11359 0 0 7190.7 0 0 16273 0 0 11810 0 0 16442 0 0 12224 0 0 8127.6 0 0 5112.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22429000 22429000 0 0 NaN 2554 1404 994 994 4891 5216 5556 6176 5556 6176 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12976 5556 6176 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12976 5556 6176 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12976 Q86YV0 18 Q86YV0 Q86YV0 RAS protein activator like-3 RASAL3 sp|Q86YV0|RASL3_HUMAN RAS protein activator like-3 OS=Homo sapiens GN=RASAL3 PE=1 SV=2 0.963258 15.9554 5.01441E-05 124.6 100.4 124.6 1 S PPSPSRTSQTQPTATSPLTSYRWHTGGGGEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPXXXXXXXXX TSQTQPTAT(0.024)S(0.963)PLT(0.009)S(0.003)YR T(-101.12)S(-101.12)QT(-88.89)QPT(-61.91)AT(-15.96)S(15.96)PLT(-20.3)S(-24.63)Y(-61.05)R 10 3 -0.33401 13561 0 0 11213 0 0 12054 0 0 9767.6 0 0 12171 0 0 14085 0 0 11820 0 0 11919 0 0 10348 0 0 6529.1 0 0 12827 0 0 10584 0 0 12225 0 0 10187 0 0 12338 0 0 13910 0 0 12008 0 0 12236 0 0 10273 0 0 6423.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 34785000 34785000 0 0 NaN 2555 1404 18 18 4949 5277 5620 6246 5620 6246 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12134 5620 6246 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12134 5620 6246 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12134 Q86YV5 826 Q86YV5 Q86YV5 Tyrosine-protein kinase SgK223 SGK223 sp|Q86YV5|SG223_HUMAN Tyrosine-protein kinase SgK223 OS=Homo sapiens GN=SGK223 PE=1 SV=4 0.81862 6.54493 1.00048E-17 231.07 213.91 231.07 1 S QPPPLPQKKIVSRAASSPDGFFWTQGSPKPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP AAS(0.819)S(0.181)PDGFFWTQGSPKPGTASPK AAS(6.54)S(-6.54)PDGFFWT(-75.68)QGS(-140.16)PKPGT(-173.17)AS(-183.45)PK 3 4 -0.071419 36984 0 0 6584.4 0 0 40000 0 0 5306.4 0 0 7550.3 0 0 37985 0 0 7530.3 0 0 18640 0 0 6175.4 0 0 20539 0 0 35008 0 0 6212.8 0 0 39707 0 0 6051.5 0 0 9576.5 0 0 36412 0 0 7629 0 0 20066 0 0 6150.7 0 0 19771 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 34285000 34285000 0 0 NaN 2556 1405 826 826 77;78 82;83 90;91 103;104 91 104 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19331 91 104 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19331 91 104 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19331 Q86YV5 745 Q86YV5 Q86YV5 Tyrosine-protein kinase SgK223 SGK223 sp|Q86YV5|SG223_HUMAN Tyrosine-protein kinase SgK223 OS=Homo sapiens GN=SGK223 PE=1 SV=4 0.806244 7.89286 0.0343694 59.359 43.416 59.359 1 S SSDLEKVSQGSAESLSPSFRGVHVSFTTGST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPXXXXXXXXXXX VSQGS(0.002)AES(0.131)LS(0.806)PS(0.061)FR VS(-45.2)QGS(-27.07)AES(-7.89)LS(7.89)PS(-11.2)FR 10 2 -0.42444 16261 0 0 6591.6 0 0 17367 0 0 6781.3 0 0 9389.4 0 0 16913 0 0 7733.6 0 0 13371 0 0 6544.3 0 0 29102 0 0 15391 0 0 6227.9 0 0 17323 0 0 7114 0 0 9974.9 0 0 16511 0 0 7919.1 0 0 14426 0 0 6507.7 0 0 27712 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12281000 12281000 0 0 NaN 2557 1405 745 745 5269 5615 5986 6651 5986 6651 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13838 5986 6651 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13838 5986 6651 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13838 Q8IU68 722 Q8IU68 Q8IU68 Transmembrane channel-like protein 8 TMC8 sp|Q8IU68|TMC8_HUMAN Transmembrane channel-like protein 8 OS=Homo sapiens GN=TMC8 PE=1 SV=1 1 72.2763 0.0136966 72.276 59.749 72.276 1 S GQHGAPASARRFRFPSGAEL___________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX FRFPS(1)GAEL FRFPS(72.28)GAEL 5 2 0.068955 3485.6 0 0 3964 0 0 3662.6 0 0 3479.5 0 0 11429 0 0 3499.8 0 0 13511 0 0 6577.6 0 0 3952.4 0 0 7524 0 0 3298.9 0 0 3741.9 0 0 3776.9 0 0 3602.5 0 0 11160 0 0 3559.8 0 0 13391 0 0 6705.2 0 0 4305.3 0 0 7237 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5406500 5406500 0 0 NaN 2558 1406 722 722 1313 1384 1490 1652 1490 1652 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22348 1490 1652 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22348 1490 1652 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22348 Q8IU68 658 Q8IU68 Q8IU68 Transmembrane channel-like protein 8 TMC8 sp|Q8IU68|TMC8_HUMAN Transmembrane channel-like protein 8 OS=Homo sapiens GN=TMC8 PE=1 SV=1 0.998893 29.554 2.39879E-07 165.9 144.64 165.9 1 S VEDLSRLLPEPGPSDSPGPKYPASQASRPQS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPXXXXXXXXXXX LLPEPGPS(0.001)DS(0.999)PGPK LLPEPGPS(-29.55)DS(29.55)PGPK 10 3 0.98182 3776.3 0 0 2954.5 0 0 4308 0 0 3755.5 0 0 9858.3 0 0 3816.7 0 0 10123 0 0 5835.3 0 0 3213.2 0 0 5879.2 0 0 3575.3 0 0 2795.6 0 0 4375.8 0 0 3808.1 0 0 9673.7 0 0 3859.3 0 0 10102 0 0 5952.2 0 0 3463.5 0 0 5671 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12248000 12248000 0 0 NaN 2559 1406 658 658 2446 2584 2778 3101 2778 3101 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17568 2778 3101 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17568 2778 3101 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17568 Q8IU81 453 Q8IU81 Q8IU81 Interferon regulatory factor 2-binding protein 1 IRF2BP1 sp|Q8IU81|I2BP1_HUMAN Interferon regulatory factor 2-binding protein 1 OS=Homo sapiens GN=IRF2BP1 PE=1 SV=1 0.99993 41.5728 6.69039E-11 176.57 161.65 176.57 1 S KDPGGGGGPVRAGGASPAASSTAQPPTQHRL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPX AGGAS(1)PAASSTAQPPTQHR AGGAS(41.57)PAAS(-41.57)S(-73.61)T(-86.81)AQPPT(-152.19)QHR 5 3 -0.14652 5867.2 0 0 7024.7 0 0 5513.5 0 0 7483.7 0 0 7233.4 0 0 5883.5 0 0 9134.5 0 0 7295.8 0 0 7635 0 0 3486.6 0 0 5550.6 0 0 6638.6 0 0 5596.8 0 0 7630.3 0 0 7264.4 0 0 5993 0 0 9165.8 0 0 7368.6 0 0 7597.1 0 0 3451.9 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 62426000 62426000 0 0 NaN 2560 1407 453 453 198 207 223 250;251 223 251 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5989 223 251 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5989 223 251 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5989 Q8IU81 436 Q8IU81 Q8IU81 Interferon regulatory factor 2-binding protein 1 IRF2BP1 sp|Q8IU81|I2BP1_HUMAN Interferon regulatory factor 2-binding protein 1 OS=Homo sapiens GN=IRF2BP1 PE=1 SV=1 1 97.0627 1.95749E-05 130.25 92.015 97.063 1 S SPIAALKNVAEALGHSPKDPGGGGGPVRAGG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPPPXXX NVAEALGHS(1)PKDPGGGGGPVR NVAEALGHS(97.06)PKDPGGGGGPVR 9 3 0.30607 21836 0 0 26656 0 0 22642 0 0 26318 0 0 28372 0 0 20146 0 0 24542 0 0 24796 0 0 27495 0 0 15603 0 0 20666 0 0 25179 0 0 22815 0 0 26944 0 0 28402 0 0 20556 0 0 25247 0 0 25162 0 0 27004 0 0 15266 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 73017000 73017000 0 0 NaN 2561 1407 436 436 2952 3131 3352;3353 3717;3718 3353 3718 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12133 3352 3717 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12095 3352 3717 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12095 Q8IU81 384 Q8IU81 Q8IU81 Interferon regulatory factor 2-binding protein 1 IRF2BP1 sp|Q8IU81|I2BP1_HUMAN Interferon regulatory factor 2-binding protein 1 OS=Homo sapiens GN=IRF2BP1 PE=1 SV=1 1 104.951 0.000272762 104.95 90.478 104.95 1 S APSRNLAPTPRRRKASPEPEGEAAGKMTTEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX RKAS(1)PEPEGEAAGK RKAS(104.95)PEPEGEAAGK 4 3 -0.088805 17931 0 0 18633 0 0 17885 0 0 17803 0 0 21760 0 0 16068 0 0 22212 0 0 18987 0 0 19522 0 0 3310.1 0 0 16967 0 0 17597 0 0 18060 0 0 18303 0 0 21857 0 0 16226 0 0 22514 0 0 19032 0 0 19376 0 0 3556.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24131000 24131000 0 0 NaN 2562 1407 384 384 3289 3490 3727 4140 3727 4140 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7236 3727 4140 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7236 3727 4140 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7236 Q8IU81 66 Q8IU81 Q8IU81 Interferon regulatory factor 2-binding protein 1 IRF2BP1 sp|Q8IU81|I2BP1_HUMAN Interferon regulatory factor 2-binding protein 1 OS=Homo sapiens GN=IRF2BP1 PE=1 SV=1 1 61.1614 0.0280519 61.161 48.936 61.161 1 S AARQLKRSHVLPEGRSPGPPALKHPATKDLA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX S(1)PGPPALK S(61.16)PGPPALK 1 2 0.2207 27675 0 0 56929 0 0 29458 0 0 58012 0 0 19595 0 0 30283 0 0 18083 0 0 34311 0 0 63960 0 0 6629.2 0 0 26195 0 0 53785 0 0 29436 0 0 59053 0 0 20489 0 0 31655 0 0 19736 0 0 34460 0 0 61163 0 0 7036.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 35758000 35758000 0 0 NaN 2563 1407 66 66 4110 4382 4672 5187 4672 5187 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12492 4672 5187 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12492 4672 5187 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12492 Q8IUD2 37 Q8IUD2 Q8IUD2 ELKS/Rab6-interacting/CAST family member 1 ERC1 sp|Q8IUD2|RB6I2_HUMAN ELKS/Rab6-interacting/CAST family member 1 OS=Homo sapiens GN=ERC1 PE=1 SV=1 0.609879 2.61215 5.71102E-11 186.24 171.08 186.24 1 S PRLPRSPRLGHRRTNSTGGSSGSSVGGGSGK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP RT(0.334)NS(0.61)T(0.056)GGSSGSSVGGGSGK RT(-2.61)NS(2.61)T(-10.39)GGS(-36.02)S(-65.66)GS(-79.01)S(-95.06)VGGGS(-162.51)GK 4 3 -0.097587 36645 0 0 35961 0 0 40482 0 0 33245 0 0 41685 0 0 46546 0 0 50100 0 0 46200 0 0 40253 0 0 15869 0 0 34690 0 0 33956 0 0 40573 0 0 34514 0 0 42341 0 0 46087 0 0 50324 0 0 46833 0 0 40135 0 0 16012 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 54101000 54101000 0 0 NaN 2564 1408 37 37 3522;4818 3739;5140 3985;5479 4424;6097 3985 4424 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5841 3985 4424 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5841 3985 4424 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5841 Q8IUD2;O15083 191;187 Q8IUD2 Q8IUD2 ELKS/Rab6-interacting/CAST family member 1;ERC protein 2 ERC1;ERC2 sp|Q8IUD2|RB6I2_HUMAN ELKS/Rab6-interacting/CAST family member 1 OS=Homo sapiens GN=ERC1 PE=1 SV=1;sp|O15083|ERC2_HUMAN ERC protein 2 OS=Homo sapiens GN=ERC2 PE=1 SV=3 0.999842 38.0143 0.00463032 89.301 59.757 89.301 1 S ESKLSSSMNSIKTFWSPELKKERALRKDEAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX TFWS(1)PELKK T(-38.01)FWS(38.01)PELKK 4 3 -0.28792 15068 0 0 17929 0 0 17078 0 0 18612 0 0 21291 0 0 18127 0 0 22453 0 0 19044 0 0 18933 0 0 32382 0 0 14266 0 0 16940 0 0 17135 0 0 19061 0 0 21370 0 0 18263 0 0 22703 0 0 20043 0 0 18831 0 0 30932 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 20433000 20433000 0 0 NaN 2565 1408 191 191 4713;4714 5024;5025 5351;5352 5946;5947 5352 5947 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19740 5352 5947 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19740 5352 5947 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19740 Q8IUD2 21 Q8IUD2 Q8IUD2 ELKS/Rab6-interacting/CAST family member 1 ERC1 sp|Q8IUD2|RB6I2_HUMAN ELKS/Rab6-interacting/CAST family member 1 OS=Homo sapiens GN=ERC1 PE=1 SV=1 0.998111 27.2386 0.000138916 107.98 83.595 107.98 1 S RSVGKVEPSSQSPGRSPRLPRSPRLGHRRTN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPXXXXXXXXXXXXX VEPSSQS(0.002)PGRS(0.998)PR VEPS(-61.73)S(-54.41)QS(-27.24)PGRS(27.24)PR 11 3 -0.17135 6799.2 0 0 5086.4 0 0 7309 0 0 5576.4 0 0 8481.3 0 0 7480.5 0 0 8505.2 0 0 7191.3 0 0 5270.9 0 0 2611.4 0 0 6435.7 0 0 4807.8 0 0 7344.9 0 0 5726.3 0 0 8534.9 0 0 7414.4 0 0 8567.9 0 0 7303.3 0 0 5338 0 0 2625.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17913000 17913000 0 0 NaN 2566 1408 21 21 5097 5434 5787 6432 5787 6432 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6135 5787 6432 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6135 5787 6432 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6135 Q8IV50 24 Q8IV50 Q8IV50 LysM and putative peptidoglycan-binding domain-containing protein 2 LYSMD2 sp|Q8IV50|LYSM2_HUMAN LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Homo sapiens GN=LYSMD2 PE=1 SV=1 0.928122 11.1101 0.0391235 44.734 21.498 44.734 1 S SLREGGPRAPRPSAPSPPPRSRSGSESEEAE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX APRPS(0.072)APS(0.928)PPPR APRPS(-11.11)APS(11.11)PPPR 8 3 -1.452 9090.1 0 0 10125 0 0 7746.6 0 0 12111 0 0 9323.3 0 0 9936.6 0 0 8919.2 0 0 9278.4 0 0 9992.3 0 0 2619.4 0 0 8596.5 0 0 9576.1 0 0 7896.1 0 0 12279 0 0 9363.5 0 0 10054 0 0 9127.7 0 0 9411.4 0 0 9813.9 0 0 2681.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8412200 8412200 0 0 NaN 2567 1409 24 24 366 392 426 474 426 474 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7382 426 474 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7382 426 474 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7382 Q8IV50 31 Q8IV50 Q8IV50 LysM and putative peptidoglycan-binding domain-containing protein 2 LYSMD2 sp|Q8IV50|LYSM2_HUMAN LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Homo sapiens GN=LYSMD2 PE=1 SV=1 0.482653 0 2.13895E-08 138.23 120.09 138.23 S RAPRPSAPSPPPRSRSGSESEEAELSLSLAR X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.483)GS(0.483)ES(0.035)EEAELSLSLAR S(0)GS(0)ES(-11.43)EEAELS(-110.59)LS(-131.5)LAR 1 3 -0.059802 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2568 1409 31 31 3804 4052 4323 4803 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18151 4323 4803 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18151 4323 4803 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18151 Q8IV50 33 Q8IV50 Q8IV50 LysM and putative peptidoglycan-binding domain-containing protein 2 LYSMD2 sp|Q8IV50|LYSM2_HUMAN LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Homo sapiens GN=LYSMD2 PE=1 SV=1 0.482653 0 2.13895E-08 138.23 120.09 138.23 S PRPSAPSPPPRSRSGSESEEAELSLSLARTK X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.483)GS(0.483)ES(0.035)EEAELSLSLAR S(0)GS(0)ES(-11.43)EEAELS(-110.59)LS(-131.5)LAR 3 3 -0.059802 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2569 1409 33 33 3804 4052 4323 4803 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18151 4323 4803 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18151 4323 4803 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18151 Q8IV63 136 Q8IV63 Q8IV63 Inactive serine/threonine-protein kinase VRK3 VRK3 sp|Q8IV63|VRK3_HUMAN Inactive serine/threonine-protein kinase VRK3 OS=Homo sapiens GN=VRK3 PE=1 SV=2 0.572768 1.27473 0.034169 45.891 23.693 45.891 1 S GSPQKTSCSPQKTRQSPQTLKRSRVTTSLEA X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX T(0.427)RQS(0.573)PQTLK T(-1.27)RQS(1.27)PQT(-35.66)LK 4 3 -0.71395 20193 0 0 17327 0 0 21070 0 0 14395 0 0 14660 0 0 19458 0 0 11174 0 0 16222 0 0 17544 0 0 2715.9 0 0 19111 0 0 16351 0 0 21081 0 0 15040 0 0 15212 0 0 19243 0 0 11716 0 0 16480 0 0 17040 0 0 2932.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21505000 21505000 0 0 NaN 2570 1410 136 136 4897 5222 5563 6184 5563 6184 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7913 5563 6184 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7913 5563 6184 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7913 Q8IV63;Q8IY33 129;272 Q8IV63;Q8IY33 Q8IY33 Inactive serine/threonine-protein kinase VRK3;MICAL-like protein 2 VRK3;MICALL2 sp|Q8IV63|VRK3_HUMAN Inactive serine/threonine-protein kinase VRK3 OS=Homo sapiens GN=VRK3 PE=1 SV=2;sp|Q8IY33|MILK2_HUMAN MICAL-like protein 2 OS=Homo sapiens GN=MICALL2 PE=1 SV=1 0.9995 35.0191 0.00117134 120.76 92.036 120.76 1 S KSPQVTRGSPQKTSCSPQKTRQSPQTLKRSR;PRQPGAMGVDSRTSCSPQKAQEANKARPSAW X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX TSCS(0.999)PQK T(-35.02)S(-37.31)CS(35.02)PQK 4 2 -0.02842 40596 0 0 37244 0 0 40756 0 0 40561 0 0 25537 0 0 41747 0 0 26500 0 0 35358 0 0 44908 0 0 2793.3 0 0 38415 0 0 35202 0 0 40845 0 0 41464 0 0 26844 0 0 41718 0 0 27433 0 0 35798 0 0 43530 0 0 3448.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 39779000 39779000 0 0 NaN 2571 1410;1433 129;272 272 4908 5233 5576 6198 5576 6198 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6653 5576 6198 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6653 5576 6198 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6653 Q8IVH2 554 Q8IVH2 Q8IVH2 Forkhead box protein P4 FOXP4 sp|Q8IVH2|FOXP4_HUMAN Forkhead box protein P4 OS=Homo sapiens GN=FOXP4 PE=1 SV=1 0.98051 17.0362 8.65623E-06 139.78 109.97 139.78 1 S DEREYQKRRPPKMTGSPTLVKNMISGLSYGA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX MTGS(0.981)PT(0.019)LVK MT(-40.44)GS(17.04)PT(-17.04)LVK 4 2 2.2433 31233 0 0 27289 0 0 33739 0 0 23752 0 0 17806 0 0 30497 0 0 19117 0 0 23288 0 0 26554 0 0 9404.6 0 0 29564 0 0 25759 0 0 33637 0 0 24712 0 0 19036 0 0 30195 0 0 19600 0 0 23922 0 0 25886 0 0 9394.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27010000 27010000 0 0 NaN 2572 1411 554 554 2756 2924 3134 3482 3134 3482 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15117 3134 3482 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15117 3134 3482 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15117 Q8IVT5 334 Q8IVT5 Q8IVT5 Kinase suppressor of Ras 1 KSR1 sp|Q8IVT5|KSR1_HUMAN Kinase suppressor of Ras 1 OS=Homo sapiens GN=KSR1 PE=1 SV=3 0.998819 29.2718 0.00339042 91.475 72.151 91.475 1 S RIDDVSSMRFDLSHGSPQMVRRDIGLSVTHR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX FDLS(0.001)HGS(0.999)PQMVR FDLS(-29.27)HGS(29.27)PQMVR 7 3 3.9778 7464.2 0 0 9369.8 0 0 7874.7 0 0 9507.8 0 0 8342.3 0 0 8149.2 0 0 7837.3 0 0 8331.9 0 0 8202.2 0 0 2494.9 0 0 7064.5 0 0 8852.1 0 0 7910.5 0 0 9732.1 0 0 8431.4 0 0 8236 0 0 8012 0 0 8425.6 0 0 8077.7 0 0 2542 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28008000 28008000 0 0 NaN 2573 1412 334 334 1245 1310 1411 1564 1411 1564 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14825 1411 1564 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14825 1411 1564 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14825 Q8IVT5 406 Q8IVT5 Q8IVT5 Kinase suppressor of Ras 1 KSR1 sp|Q8IVT5|KSR1_HUMAN Kinase suppressor of Ras 1 OS=Homo sapiens GN=KSR1 PE=1 SV=3 0.969123 15.1071 8.14793E-07 155.43 118.74 155.43 1 S CRISFLPLTRLRRTESVPSDINNPVDRAAEP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX T(0.001)ES(0.969)VPS(0.03)DINNPVDR T(-29.97)ES(15.11)VPS(-15.11)DINNPVDR 3 2 -1.3751 8956.4 0 0 10303 0 0 9491.9 0 0 10915 0 0 12969 0 0 9443.4 0 0 13357 0 0 12330 0 0 12497 0 0 12204 0 0 8477 0 0 9736.7 0 0 9570.3 0 0 11146 0 0 12961 0 0 9590.4 0 0 13554 0 0 12624 0 0 12368 0 0 11777 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15443000 15443000 0 0 NaN 2574 1412 406 406 4695 5006 5332 5927 5332 5927 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12708 5332 5927 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12708 5332 5927 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12708 Q8IWA0 796 Q8IWA0 Q8IWA0 WD repeat-containing protein 75 WDR75 sp|Q8IWA0|WDR75_HUMAN WD repeat-containing protein 75 OS=Homo sapiens GN=WDR75 PE=1 SV=1 0.648177 2.68032 4.17842E-32 320.57 279.12 320.57 1 S DSDEENDFTEKVQDTSNTGLGEDIIHQLSKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPX VQDT(0.35)S(0.648)NT(0.002)GLGEDIIHQLSK VQDT(-2.68)S(2.68)NT(-24.79)GLGEDIIHQLS(-252)K 5 3 -0.33847 11286 0 0 12225 0 0 10875 0 0 11827 0 0 5627.5 0 0 12634 0 0 6270 0 0 11763 0 0 13862 0 0 19942 0 0 10678 0 0 11547 0 0 10911 0 0 12181 0 0 6036.8 0 0 12655 0 0 6559.4 0 0 12434 0 0 13356 0 0 19050 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 101200000 101200000 0 0 NaN 2575 1413 796 796 5219 5563 5927 6585 5927 6585 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22203 5927 6585 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22203 5927 6585 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22203 Q8IWB9 747 Q8IWB9 Q8IWB9 Testis-expressed sequence 2 protein TEX2 sp|Q8IWB9|TEX2_HUMAN Testis-expressed sequence 2 protein OS=Homo sapiens GN=TEX2 PE=1 SV=2 0.522603 1.54403 6.02477E-16 229.15 170.94 229.15 1 S SRHNSPSGHLTHSRSSSKGSVEEIMSQPKQK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPXX S(0.11)S(0.523)S(0.366)KGS(0.001)VEEIMSQPK S(-6.76)S(1.54)S(-1.54)KGS(-27.54)VEEIMS(-121.49)QPK 2 3 0.058876 51392 0 0 23464 0 0 52120 0 0 23981 0 0 51461 0 0 54642 0 0 56950 0 0 48489 0 0 26017 0 0 19445 0 0 48633 0 0 22168 0 0 52442 0 0 25084 0 0 52310 0 0 53361 0 0 56859 0 0 49462 0 0 26983 0 0 19432 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 54477000 54477000 0 0 NaN 2576 1414 747 747 4426 4716 5020 5568;5569 5020 5569 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15742 5020 5569 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15742 5020 5569 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15742 Q8IWB9 266 Q8IWB9 Q8IWB9 Testis-expressed sequence 2 protein TEX2 sp|Q8IWB9|TEX2_HUMAN Testis-expressed sequence 2 protein OS=Homo sapiens GN=TEX2 PE=1 SV=2 0.996524 24.6602 5.30559E-16 239.35 216.43 239.35 1 S TQPRNTGGDSKTAPSSPLTSPSDTRSFFKVP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPXXXXXX TAPS(0.003)S(0.997)PLTSPSDTR T(-88.46)APS(-24.66)S(24.66)PLT(-41.72)S(-61.2)PS(-70.59)DT(-101.16)R 5 2 -0.67735 15217 0 0 11189 0 0 15401 0 0 11529 0 0 19377 0 0 14450 0 0 19572 0 0 17424 0 0 10823 0 0 7657.8 0 0 14400 0 0 10572 0 0 15547 0 0 11864 0 0 19424 0 0 14406 0 0 19674 0 0 17593 0 0 11050 0 0 7614 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16534000 16534000 0 0 NaN 2577 1414 266 266 4618 4926 5247 5828 5247 5828 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9523 5247 5828 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9523 5247 5828 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9523 Q8IWC1 185 Q8IWC1 Q8IWC1 MAP7 domain-containing protein 3 MAP7D3 sp|Q8IWC1|MA7D3_HUMAN MAP7 domain-containing protein 3 OS=Homo sapiens GN=MAP7D3 PE=1 SV=2 0.496844 1.15671 0.00598037 85.062 69.296 85.062 S AMANSESKTANKRSASTEKLEQGTSALIRQM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX S(0.381)AS(0.497)T(0.122)EKLEQGTSALIR S(-1.16)AS(1.16)T(-6.09)EKLEQGT(-40.27)S(-39.15)ALIR 3 3 0.18493 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2578 1415 185 185 3623 3851 4104 4561 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16286 4104 4561 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16286 4104 4561 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16286 Q8IWI9 534 Q8IWI9 Q8IWI9 MAX gene-associated protein MGA sp|Q8IWI9|MGAP_HUMAN MAX gene-associated protein OS=Homo sapiens GN=MGA PE=1 SV=3 1 82.1708 0.00939172 82.171 54.842 82.171 1 S AFCLGKESENGLRKHSPDLRVVQKYPLLKEP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX KHS(1)PDLR KHS(82.17)PDLR 3 3 -0.14537 18359 0 0 21002 0 0 20058 0 0 21299 0 0 12605 0 0 20379 0 0 12707 0 0 16684 0 0 21879 0 0 2485 0 0 17378 0 0 19841 0 0 20008 0 0 21837 0 0 13242 0 0 20426 0 0 13181 0 0 16953 0 0 21199 0 0 2726.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20757000 20757000 0 0 NaN 2579 1416 534 534 2087 2207 2376 2646 2376 2646 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6424 2376 2646 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6424 2376 2646 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6424 Q8IWI9 924 Q8IWI9 Q8IWI9 MAX gene-associated protein MGA sp|Q8IWI9|MGAP_HUMAN MAX gene-associated protein OS=Homo sapiens GN=MGA PE=1 SV=3 0.983117 17.6562 0.0084361 85.672 28.083 85.672 1 S GRTKSSYKSILPYPVSPKQKYSHVILGDKVT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX SILPY(0.017)PVS(0.983)PK S(-47.38)ILPY(-17.66)PVS(17.66)PK 8 2 0.27346 11668 0 0 11927 0 0 12048 0 0 13188 0 0 8787.2 0 0 14598 0 0 9579.3 0 0 13196 0 0 13950 0 0 21826 0 0 11042 0 0 11274 0 0 12071 0 0 13486 0 0 9125.1 0 0 14593 0 0 9832.6 0 0 13948 0 0 13579 0 0 20857 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 35324000 35324000 0 0 NaN 2580 1416 924 924 3846 4099 4374 4865 4374 4865 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20129 4374 4865 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20129 4374 4865 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20129 Q8IWI9 56 Q8IWI9 Q8IWI9 MAX gene-associated protein MGA sp|Q8IWI9|MGAP_HUMAN MAX gene-associated protein OS=Homo sapiens GN=MGA PE=1 SV=3 0.846924 7.49416 3.11402E-06 137.21 120.9 137.21 1 S LVTNQDACALASSVSSPVKSKGKICLPADCT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX TDQGILVTNQDACALASS(0.002)VS(0.151)S(0.847)PVK T(-124.77)DQGILVT(-103.54)NQDACALAS(-32.29)S(-26.8)VS(-7.49)S(7.49)PVK 21 4 0.0019842 4447.7 0 0 4508.8 0 0 4954.6 0 0 4942.4 0 0 4315.5 0 0 4499.3 0 0 3571.4 0 0 5119.7 0 0 5380.5 0 0 10929 0 0 4210.6 0 0 4261.8 0 0 4950.6 0 0 5041.1 0 0 4408.3 0 0 4558 0 0 3720.7 0 0 5440.7 0 0 5232.2 0 0 10410 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16598000 16598000 0 0 NaN 2581 1416 56 56 4665 4976 5300 5888 5300 5888 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19691 5300 5888 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19691 5300 5888 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19691 Q8IWI9 369 Q8IWI9 Q8IWI9 MAX gene-associated protein MGA sp|Q8IWI9|MGAP_HUMAN MAX gene-associated protein OS=Homo sapiens GN=MGA PE=1 SV=3 1 70.3845 2.06051E-05 132.76 85.474 132.76 1 S ECLIASSFEDDSRVASPLDQNGSFNVVIKEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX VAS(1)PLDQNGSFNVVIK VAS(70.38)PLDQNGS(-70.38)FNVVIK 3 3 1.9064 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2582 1416 369 369 5055 5389 5741 6380 5741 6380 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21230 5741 6380 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21230 5741 6380 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21230 Q8IWI9 449 Q8IWI9 Q8IWI9 MAX gene-associated protein MGA sp|Q8IWI9|MGAP_HUMAN MAX gene-associated protein OS=Homo sapiens GN=MGA PE=1 SV=3 0.96414 15.2473 2.6219E-10 198.33 147.06 198.33 1 S DNPEADHLSSKWLPSSPSGVAKAKMFKLDTG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX WLPS(0.029)S(0.964)PS(0.007)GVAK WLPS(-15.25)S(15.25)PS(-21.35)GVAK 5 2 0.80343 27642 0 0 32857 0 0 30761 0 0 30506 0 0 19032 0 0 28351 0 0 20487 0 0 24928 0 0 31634 0 0 32684 0 0 26168 0 0 31026 0 0 30654 0 0 31431 0 0 20037 0 0 28532 0 0 21089 0 0 26122 0 0 30741 0 0 31353 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 58187000 58187000 0 0 NaN 2583 1416 449 449 5343 5692 6070 6747 6070 6747 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18968 6070 6747 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18968 6070 6747 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18968 Q8IWW6 176 Q8IWW6 Q8IWW6 Rho GTPase-activating protein 12 ARHGAP12 sp|Q8IWW6|RHG12_HUMAN Rho GTPase-activating protein 12 OS=Homo sapiens GN=ARHGAP12 PE=1 SV=1 1 147.165 6.23355E-07 147.16 110.53 147.16 1 S NDSHSPKVSSQNRTRSFGHFPGPEFLDVEKT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPX S(1)FGHFPGPEFLDVEK S(147.16)FGHFPGPEFLDVEK 1 3 -1.779 9601.6 0 0 12232 0 0 10580 0 0 11413 0 0 6975 0 0 11887 0 0 6227.4 0 0 11052 0 0 11977 0 0 25121 0 0 9089.2 0 0 11550 0 0 10552 0 0 11776 0 0 7286 0 0 11931 0 0 6532.3 0 0 11875 0 0 11574 0 0 23910 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20117000 20117000 0 0 NaN 2584 1418 176 176 3742 3982 4246 4721 4246 4721 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23181 4246 4721 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23181 4246 4721 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23181 Q8IWY9 265 Q8IWY9 Q8IWY9 Codanin-1 CDAN1 sp|Q8IWY9|CDAN1_HUMAN Codanin-1 OS=Homo sapiens GN=CDAN1 PE=1 SV=4 0.916755 10.4442 3.80871E-05 118.19 90.011 118.19 1 S EREMLRKERSKQLQQSPTPTCPTPELGSPLP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP QLQQS(0.917)PT(0.083)PTCPTPELGSPLPSR QLQQS(10.44)PT(-10.44)PT(-32.78)CPT(-78.8)PELGS(-102.38)PLPS(-105)R 5 3 0.87358 5265.5 0 0 5678.9 0 0 5292.2 0 0 7046.8 0 0 4773.8 0 0 5309.3 0 0 4578.6 0 0 5886 0 0 6289.6 0 0 10635 0 0 4982.6 0 0 5372.4 0 0 5320.7 0 0 7124 0 0 4873.9 0 0 5426.6 0 0 4716.8 0 0 6202.2 0 0 6133.4 0 0 10150 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13923000 13923000 0 0 NaN 2585 1419 265 265 3070 3256 3484 3860 3484 3860 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16290 3484 3860 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16290 3484 3860 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16290 Q8IWZ3 1679 Q8IWZ3 Q8IWZ3 Ankyrin repeat and KH domain-containing protein 1 ANKHD1 sp|Q8IWZ3|ANKH1_HUMAN Ankyrin repeat and KH domain-containing protein 1 OS=Homo sapiens GN=ANKHD1 PE=1 SV=1 0.996962 25.1616 5.18377E-05 141.29 46.489 141.29 1 S VSLPLSSPNIKLNLTSPKRGQKREEGWKEVV X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX LNLT(0.003)S(0.997)PK LNLT(-25.16)S(25.16)PK 5 2 -0.11356 58096 0 0 108860 0 0 59777 0 0 104490 0 0 35865 0 0 53841 0 0 39074 0 0 68643 0 0 117590 0 0 8757.2 0 0 54980 0 0 102810 0 0 59808 0 0 106740 0 0 37927 0 0 56430 0 0 41770 0 0 68544 0 0 112700 0 0 9834.6 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 144670000 144670000 0 0 NaN 2586 1420 1679 1679 2480;2481 2619;2620 2813;2814 3140;3141 2813 3140 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15685 2813 3140 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15685 2813 3140 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15685 Q8IWZ3 1670 Q8IWZ3 Q8IWZ3 Ankyrin repeat and KH domain-containing protein 1 ANKHD1 sp|Q8IWZ3|ANKH1_HUMAN Ankyrin repeat and KH domain-containing protein 1 OS=Homo sapiens GN=ANKHD1 PE=1 SV=1 0.997021 25.2464 7.65134E-05 119.96 75.523 119.96 1 S NSLSTSYKTVSLPLSSPNIKLNLTSPKRGQK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX TVSLPLS(0.003)S(0.997)PNIK T(-82.37)VS(-82.95)LPLS(-25.25)S(25.25)PNIK 8 3 -0.15388 3423.3 0 0 8423.7 0 0 3436 0 0 8524.2 0 0 3723.6 0 0 3494.1 0 0 3884.6 0 0 5255.1 0 0 9427.8 0 0 3495.1 0 0 3239.3 0 0 7958.2 0 0 3463 0 0 8665.4 0 0 3769.2 0 0 3755.5 0 0 4098.3 0 0 5308.3 0 0 9067.3 0 0 3412.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13886000 13886000 0 0 NaN 2587 1420 1670 1670 5016 5348 5700 6331 5700 6331 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19719 5700 6331 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19719 5700 6331 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19719 Q8IX07 637 Q8IX07 Q8IX07 Zinc finger protein ZFPM1 ZFPM1 sp|Q8IX07|FOG1_HUMAN Zinc finger protein ZFPM1 OS=Homo sapiens GN=ZFPM1 PE=1 SV=2 0.694125 3.55894 3.74881E-06 136.71 116.97 136.71 1 S ARAPPGQPAEPDAPRSSPGPGAREEGAGGAA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPPPXXXXXXXX APPGQPAEPDAPRS(0.694)S(0.306)PGPGAR APPGQPAEPDAPRS(3.56)S(-3.56)PGPGAR 14 3 0.76709 11234 0 0 11531 0 0 10908 0 0 11909 0 0 14973 0 0 13289 0 0 16395 0 0 13522 0 0 12847 0 0 3204.5 0 0 10629 0 0 10895 0 0 11055 0 0 12226 0 0 14971 0 0 13267 0 0 16524 0 0 13651 0 0 12826 0 0 3330.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19529000 19529000 0 0 NaN 2588 1421 637 637 362 388 420 465 420 465 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7872 420 465 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7872 420 465 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7872 Q8IX07 786 Q8IX07 Q8IX07 Zinc finger protein ZFPM1 ZFPM1 sp|Q8IX07|FOG1_HUMAN Zinc finger protein ZFPM1 OS=Homo sapiens GN=ZFPM1 PE=1 SV=2 1 132.998 6.09773E-07 150.27 105.19 150.27 1 S PGSGSGSGPGLAPARSPGPAADGPIDLSKKP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPXX S(1)PGPAADGPIDLSK S(133)PGPAADGPIDLS(-133)K 1 3 -0.38453 7276.9 0 0 15804 0 0 7380.8 0 0 13705 0 0 14151 0 0 6972.8 0 0 13409 0 0 12724 0 0 16613 0 0 3767.7 0 0 6886.2 0 0 14917 0 0 7507.6 0 0 14092 0 0 13953 0 0 7368.9 0 0 13772 0 0 12654 0 0 16256 0 0 3842.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26624000 26624000 0 0 NaN 2589 1421 786 786 4108 4380 4670 5185 4670 5185 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16528 4670 5185 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16528 4670 5185 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16528 Q8IX07 901 Q8IX07 Q8IX07 Zinc finger protein ZFPM1 ZFPM1 sp|Q8IX07|FOG1_HUMAN Zinc finger protein ZFPM1 OS=Homo sapiens GN=ZFPM1 PE=1 SV=2 0.99993 41.5242 1.87859E-08 167.06 146.24 167.06 1;2 S AGPGVEARTPADRGPSPAPAPAASPQPGSRG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPPX TPADRGPS(1)PAPAPAASPQPGSR T(-41.52)PADRGPS(41.52)PAPAPAAS(-77.62)PQPGS(-123.5)R 8 3 -0.26537 4684.5 2917.7 0 7498.5 11027 0 5082.8 4372.2 0 7695.2 11104 0 10332 6939.7 0 5447.3 3331.4 0 9048.6 5990.3 0 8311.7 6375.1 0 7926 12755 0 2046.6 2809.9 0 4434.3 2766.3 0 7084.7 10417 0 5157 4348.6 0 7853.1 11272 0 10156 6883.8 0 5600.2 3729.6 0 9241.6 6328.4 0 8287.9 6361.4 0 7868.2 12298 0 2119.5 2793.4 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 48417000 18776000 29640000 0 NaN 2590 1421 901 901 4822 5145;5146 5484;5485 6102;6103 5484 6102 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7692 5484 6102 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7692 5484 6102 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7692 Q8IX07 909 Q8IX07 Q8IX07 Zinc finger protein ZFPM1 ZFPM1 sp|Q8IX07|FOG1_HUMAN Zinc finger protein ZFPM1 OS=Homo sapiens GN=ZFPM1 PE=1 SV=2 0.840062 7.20265 2.96808E-05 124.61 105.91 124.61 2 S TPADRGPSPAPAPAASPQPGSRGPRDGLGPE X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPXXXXXXXXX T(0.006)PADRGPS(0.994)PAPAPAAS(0.84)PQPGS(0.16)R T(-22.52)PADRGPS(22.52)PAPAPAAS(7.2)PQPGS(-7.2)R 16 3 -0.025067 0 2917.7 0 0 11027 0 0 4372.2 0 0 11104 0 0 6939.7 0 0 3331.4 0 0 5990.3 0 0 6375.1 0 0 12755 0 0 2809.9 0 0 2766.3 0 0 10417 0 0 4348.6 0 0 11272 0 0 6883.8 0 0 3729.6 0 0 6328.4 0 0 6361.4 0 0 12298 0 0 2793.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 29640000 0 29640000 0 NaN 2591 1421 909 909 4822 5145;5146 5485 6103 5485 6103 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7774 5485 6103 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7774 5485 6103 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7774 Q8IX21 701 Q8IX21 Q8IX21 Protein FAM178A FAM178A sp|Q8IX21|F178A_HUMAN Protein FAM178A OS=Homo sapiens GN=FAM178A PE=1 SV=2 1 49.3004 0.0318905 49.3 6.9646 49.3 1 S QKQLQEDIRQGRGIKSPIRIGEEDSTDDEDG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX GIKS(1)PIR GIKS(49.3)PIR 4 3 0.069888 27419 0 0 15633 0 0 29219 0 0 14437 0 0 13610 0 0 30126 0 0 14015 0 0 19300 0 0 17617 0 0 777.13 0 0 25952 0 0 14761 0 0 29128 0 0 15148 0 0 14742 0 0 29363 0 0 14345 0 0 19803 0 0 17230 0 0 1178.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14994000 14994000 0 0 NaN 2592 1423 701 701 1470 1547 1669 1849 1669 1849 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10187 1669 1849 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10187 1669 1849 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10187 Q8IX21 481 Q8IX21 Q8IX21 Protein FAM178A FAM178A sp|Q8IX21|F178A_HUMAN Protein FAM178A OS=Homo sapiens GN=FAM178A PE=1 SV=2 0.996308 24.3789 2.69237E-05 133.48 100.07 133.48 1 S TKEKETKLPLLSRVPSAGSSLVPLNAKNCAL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX VPS(0.996)AGS(0.004)SLVPLNAK VPS(24.38)AGS(-24.38)S(-42.41)LVPLNAK 3 3 0.15715 6804.4 0 0 3973.5 0 0 7544.3 0 0 4758.8 0 0 5754.3 0 0 8192.9 0 0 4417.7 0 0 5413.9 0 0 4788.7 0 0 3879.7 0 0 6441.5 0 0 3758.1 0 0 7529.7 0 0 4893.5 0 0 5926.6 0 0 8031.3 0 0 4571.1 0 0 5655.2 0 0 4709.3 0 0 3778.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9952700 9952700 0 0 NaN 2593 1423 481 481 5209 5553 5917 6575 5917 6575 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19274 5917 6575 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19274 5917 6575 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19274 Q8IX90 155 Q8IX90 Q8IX90 Spindle and kinetochore-associated protein 3 SKA3 sp|Q8IX90|SKA3_HUMAN Spindle and kinetochore-associated protein 3 OS=Homo sapiens GN=SKA3 PE=1 SV=2 0.999998 56.5119 5.45844E-08 174.59 103.91 174.59 1 S DPPVASSCISEKSPRSPQLSDFGLERYIVSQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX S(1)PQLSDFGLER S(56.51)PQLS(-56.51)DFGLER 1 2 0.018451 26888 0 0 36325 0 0 27327 0 0 37535 0 0 19198 0 0 27532 0 0 19689 0 0 27961 0 0 40504 0 0 24217 0 0 25445 0 0 34322 0 0 27393 0 0 38305 0 0 19988 0 0 28095 0 0 20588 0 0 28760 0 0 39082 0 0 23450 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 107530000 107530000 0 0 NaN 2594 1424 155 155 4154;4165 4428;4440 4719;4732 5238;5251 4719 5238 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18171 4719 5238 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18171 4719 5238 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18171 Q8IX90 318 Q8IX90 Q8IX90 Spindle and kinetochore-associated protein 3 SKA3 sp|Q8IX90|SKA3_HUMAN Spindle and kinetochore-associated protein 3 OS=Homo sapiens GN=SKA3 PE=1 SV=2 0.840216 10.239 1.41387E-22 258.65 212.89 258.65 1 S IALVSTNYPLSKTNSSSNDLEVEDRTSLVLN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX T(0.001)NS(0.08)S(0.84)S(0.08)NDLEVEDR T(-30.56)NS(-10.24)S(10.24)S(-10.24)NDLEVEDR 4 2 1.9827 14349 0 0 25311 0 0 14733 0 0 22855 0 0 11019 0 0 13919 0 0 11267 0 0 17317 0 0 27794 0 0 4364.6 0 0 13579 0 0 23896 0 0 14768 0 0 23473 0 0 11421 0 0 14401 0 0 11909 0 0 17370 0 0 26723 0 0 4510.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17670000 17670000 0 0 NaN 2595 1424 318 318 4817 5139 5478 6096 5478 6096 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9276 5478 6096 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9276 5478 6096 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9276 Q8IXJ6 207 Q8IXJ6 Q8IXJ6 NAD-dependent protein deacetylase sirtuin-2 SIRT2 sp|Q8IXJ6|SIR2_HUMAN NAD-dependent protein deacetylase sirtuin-2 OS=Homo sapiens GN=SIRT2 PE=1 SV=2 0.999913 40.6102 0.0359371 55.864 32.417 55.864 3 S TSHCVSASCRHEYPLSWMKEKIFSEVTPKCE X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPXX HEY(1)PLS(1)WMKEKIFS(1)EVTPK HEY(40.44)PLS(40.61)WMKEKIFS(40.61)EVT(-40.44)PK 6 4 -2.4634 0 0 4409.8 0 0 6684 0 0 4476.1 0 0 6091.4 0 0 6594.8 0 0 4409.4 0 0 5939.6 0 0 6219.3 0 0 5781.6 0 0 66114 0 0 4173 0 0 6310.8 0 0 4528.1 0 0 6263.6 0 0 6557.9 0 0 4642.1 0 0 6073.1 0 0 8160.4 0 0 5711.4 0 0 62398 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 40252000 0 0 40252000 NaN 2596 1425 207 207 1708 1801 1945 2169 1945 2169 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24022 1945 2169 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24022 1945 2169 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24022 Q8IXJ6 215 Q8IXJ6 Q8IXJ6 NAD-dependent protein deacetylase sirtuin-2 SIRT2 sp|Q8IXJ6|SIR2_HUMAN NAD-dependent protein deacetylase sirtuin-2 OS=Homo sapiens GN=SIRT2 PE=1 SV=2 0.999913 40.6102 0.0359371 55.864 32.417 55.864 3 S CRHEYPLSWMKEKIFSEVTPKCEDCQSLVKP X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPXXXXXXXXXX HEY(1)PLS(1)WMKEKIFS(1)EVTPK HEY(40.44)PLS(40.61)WMKEKIFS(40.61)EVT(-40.44)PK 14 4 -2.4634 0 0 4409.8 0 0 6684 0 0 4476.1 0 0 6091.4 0 0 6594.8 0 0 4409.4 0 0 5939.6 0 0 6219.3 0 0 5781.6 0 0 66114 0 0 4173 0 0 6310.8 0 0 4528.1 0 0 6263.6 0 0 6557.9 0 0 4642.1 0 0 6073.1 0 0 8160.4 0 0 5711.4 0 0 62398 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 40252000 0 0 40252000 NaN 2597 1425 215 215 1708 1801 1945 2169 1945 2169 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24022 1945 2169 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24022 1945 2169 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24022 Q8IXM2 96 Q8IXM2 Q8IXM2 Chromatin complexes subunit BAP18 BAP18 sp|Q8IXM2|BAP18_HUMAN Chromatin complexes subunit BAP18 OS=Homo sapiens GN=BAP18 PE=1 SV=1 1 84.0147 3.93841E-07 155.16 139.74 155.16 1 S KRKVYEDSGIPLPAESPKKGPKKVASGVLSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPXXXXXXXXXXXXX KVYEDSGIPLPAES(1)PK KVY(-103.47)EDS(-84.01)GIPLPAES(84.01)PK 14 3 -0.33784 72872 0 0 18572 0 0 78620 0 0 18855 0 0 24937 0 0 80112 0 0 30637 0 0 46598 0 0 18336 0 0 41161 0 0 68977 0 0 17546 0 0 78189 0 0 20327 0 0 28545 0 0 77224 0 0 30575 0 0 49280 0 0 18613 0 0 39836 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 196920000 196920000 0 0 NaN 2598 1426 96 96 2274;5324 2403;5672 2586;6048 2889;6721;6722 2586 2889 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17315 2586 2889 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17315 2586 2889 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17315 Q8IXQ3 67 Q8IXQ3 Q8IXQ3 Uncharacterized protein C9orf40 C9orf40 sp|Q8IXQ3|CI040_HUMAN Uncharacterized protein C9orf40 OS=Homo sapiens GN=C9orf40 PE=1 SV=1 0.496734 0 0.00796487 91.729 73.59 91.729 S QHRKRKIDAGTMAEPSASPSKRRDSGDNSAP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPXXXXXXXXXX KIDAGTMAEPS(0.497)AS(0.497)PS(0.007)K KIDAGT(-52.08)MAEPS(0)AS(0)PS(-18.81)K 11 3 -0.070819 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2599 1427 67 67 1785;2091 1884;2212 2381 2653 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13001 2381 2653 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13001 2381 2653 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13001 Q8IXQ3 69 Q8IXQ3 Q8IXQ3 Uncharacterized protein C9orf40 C9orf40 sp|Q8IXQ3|CI040_HUMAN Uncharacterized protein C9orf40 OS=Homo sapiens GN=C9orf40 PE=1 SV=1 0.984879 19.0798 0.000142938 106.75 88.384 106.75 1 S RKRKIDAGTMAEPSASPSKRRDSGDNSAPSG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX IDAGTMAEPS(0.003)AS(0.985)PS(0.012)K IDAGT(-74.93)MAEPS(-25.24)AS(19.08)PS(-19.08)K 12 3 1.5769 10135 0 0 10455 0 0 11370 0 0 12994 0 0 7266.6 0 0 10336 0 0 9990.3 0 0 11695 0 0 12448 0 0 10683 0 0 9594.6 0 0 9890.7 0 0 11333 0 0 13145 0 0 7657.2 0 0 10516 0 0 10106 0 0 12000 0 0 12178 0 0 10330 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10357000 10357000 0 0 NaN 2600 1427 69 69 1785;2091 1884;2212 2031 2262 2031 2262 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14146 2031 2262 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14146 2031 2262 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14146 Q8IXQ4 105 Q8IXQ4 Q8IXQ4 GPALPP motifs-containing protein 1 GPALPP1 sp|Q8IXQ4|GPAM1_HUMAN GPALPP motifs-containing protein 1 OS=Homo sapiens GN=GPALPP1 PE=1 SV=1 1 145.626 1.30917E-07 145.63 112.32 145.63 1 S FFGPALPPGFKKQDDSPPRPIIGPALPPGFI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP QDDS(1)PPRPIIGPALPPGFIK QDDS(145.63)PPRPIIGPALPPGFIK 4 3 -0.44722 15450 0 0 12421 0 0 16172 0 0 11404 0 0 11763 0 0 16037 0 0 11079 0 0 13511 0 0 12575 0 0 33134 0 0 14622 0 0 11728 0 0 16187 0 0 11846 0 0 12190 0 0 15898 0 0 11352 0 0 14649 0 0 12345 0 0 31512 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 17803000 17803000 0 0 NaN 2601 1428 105 105 3005 3186 3409 3780;3781 3409 3781 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22486 3409 3781 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22486 3409 3781 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22486 Q8IXT5 839 Q8IXT5 Q8IXT5 RNA-binding protein 12B RBM12B sp|Q8IXT5|RB12B_HUMAN RNA-binding protein 12B OS=Homo sapiens GN=RBM12B PE=1 SV=2 1 82.4167 5.32584E-07 142.99 113.51 82.417 1 S DEDFRSPQEEDFRCPSDEDFRQLPEEDLREA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPXXXXXXXXXX CPS(1)DEDFR CPS(82.42)DEDFR 3 2 0.97691 29522 0 0 34906 0 0 30576 0 0 34307 0 0 35381 0 0 31676 0 0 33146 0 0 36090 0 0 33905 0 0 49088 0 0 27939 0 0 32971 0 0 30782 0 0 35220 0 0 35590 0 0 32015 0 0 33868 0 0 37509 0 0 33422 0 0 47057 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 16689000 16689000 0 0 NaN 2602 1429 839 839 615;4152 654;4426 697;4717 773;5236 697 773 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9578 4717 5236 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12951 4717 5236 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12951 Q8IXT5 250 Q8IXT5 Q8IXT5 RNA-binding protein 12B RBM12B sp|Q8IXT5|RB12B_HUMAN RNA-binding protein 12B OS=Homo sapiens GN=RBM12B PE=1 SV=2 1 93.2551 0.00374725 93.255 70.019 93.255 2 S EFGGNAVKEGDVLRRSEEHSPPRGINDRHFR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPXXXXXXXX EGDVLRRS(1)EEHS(1)PPR EGDVLRRS(93.26)EEHS(93.26)PPR 8 3 -0.35681 0 28869 0 0 32699 0 0 28069 0 0 32080 0 0 28162 0 0 29371 0 0 27733 0 0 33936 0 0 35034 0 0 4972.5 0 0 27315 0 0 30887 0 0 28310 0 0 32933 0 0 28574 0 0 29627 0 0 28450 0 0 34013 0 0 34259 0 0 5467.6 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 149740000 0 149740000 0 NaN 2603 1429 250 250 952 1006 1091 1204;1205 1091 1204 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7342 1091 1204 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7342 1091 1204 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7342 Q8IXT5 254 Q8IXT5 Q8IXT5 RNA-binding protein 12B RBM12B sp|Q8IXT5|RB12B_HUMAN RNA-binding protein 12B OS=Homo sapiens GN=RBM12B PE=1 SV=2 1 93.2551 0.00374725 93.255 70.019 93.255 2 S NAVKEGDVLRRSEEHSPPRGINDRHFRKRSH X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX EGDVLRRS(1)EEHS(1)PPR EGDVLRRS(93.26)EEHS(93.26)PPR 12 3 -0.35681 0 28869 0 0 32699 0 0 28069 0 0 32080 0 0 28162 0 0 29371 0 0 27733 0 0 33936 0 0 35034 0 0 4972.5 0 0 27315 0 0 30887 0 0 28310 0 0 32933 0 0 28574 0 0 29627 0 0 28450 0 0 34013 0 0 34259 0 0 5467.6 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 149740000 0 149740000 0 NaN 2604 1429 254 254 952 1006 1091 1204;1205 1091 1204 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7342 1091 1204 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7342 1091 1204 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7342 Q8IXT5 575 Q8IXT5 Q8IXT5 RNA-binding protein 12B RBM12B sp|Q8IXT5|RB12B_HUMAN RNA-binding protein 12B OS=Homo sapiens GN=RBM12B PE=1 SV=2 1 94.9729 4.65255E-05 129.46 100.38 94.973 1 S HSSEDFRFPPEDFRHSPEDFRRPREEDFRRP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPXXXXXXXXXX FPPEDFRHS(1)PEDFR FPPEDFRHS(94.97)PEDFR 9 3 0.22772 35410 0 0 36125 0 0 33162 0 0 37038 0 0 30950 0 0 38290 0 0 30782 0 0 36628 0 0 38334 0 0 27932 0 0 33498 0 0 34131 0 0 33494 0 0 37994 0 0 31544 0 0 38356 0 0 31548 0 0 37646 0 0 37504 0 0 27149 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 22299000 22299000 0 0 NaN 2605 1429 575 575 1301 1372 1476;1477 1636;1637;1638;1639 1477 1639 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15987 1476 1637 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15566 1476 1637 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15566 Q8IXT5 98 Q8IXT5 Q8IXT5 RNA-binding protein 12B RBM12B sp|Q8IXT5|RB12B_HUMAN RNA-binding protein 12B OS=Homo sapiens GN=RBM12B PE=1 SV=2 0.650747 5.71438 1.92872E-11 188.38 158.99 188.38 1 S IEMKRTDRVGRGRPGSGTSGVDSLSNFIESV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP GRPGS(0.651)GT(0.175)S(0.175)GVDSLSNFIESVK GRPGS(5.71)GT(-5.71)S(-5.71)GVDS(-37.79)LS(-58.6)NFIES(-150.94)VK 5 3 0.021066 12029 0 0 20052 0 0 13519 0 0 19397 0 0 15134 0 0 12318 0 0 15148 0 0 16809 0 0 22884 0 0 41221 0 0 11388 0 0 18939 0 0 13547 0 0 19843 0 0 15270 0 0 12797 0 0 15631 0 0 17928 0 0 22251 0 0 39204 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28748000 28748000 0 0 NaN 2606 1429 98 98 1589 1675 1811 2012 1811 2012 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23190 1811 2012 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23190 1811 2012 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23190 Q8IXT5 638 Q8IXT5 Q8IXT5 RNA-binding protein 12B RBM12B sp|Q8IXT5|RB12B_HUMAN RNA-binding protein 12B OS=Homo sapiens GN=RBM12B PE=1 SV=2 0.971852 15.3815 0.00220231 104.2 54.074 104.2 1 S LEEDWRRPLEEDFRRSPTEDFRQLPEEDFRQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX S(0.972)PT(0.028)EDFR S(15.38)PT(-15.38)EDFR 1 2 0.28969 22085 0 0 27788 0 0 22773 0 0 28461 0 0 21024 0 0 21443 0 0 22805 0 0 24628 0 0 31034 0 0 3830.6 0 0 20901 0 0 26254 0 0 22873 0 0 29069 0 0 21471 0 0 21854 0 0 23353 0 0 24695 0 0 30273 0 0 4176.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 70798000 70798000 0 0 NaN 2607 1429 638 638 4201 4477 4771 5296 4771 5296 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10117 4771 5296 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10117 4771 5296 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10117 Q8IXT5 278 Q8IXT5 Q8IXT5 RNA-binding protein 12B RBM12B sp|Q8IXT5|RB12B_HUMAN RNA-binding protein 12B OS=Homo sapiens GN=RBM12B PE=1 SV=2 0.672113 3.11724 0.000106327 112.34 54.115 112.34 1 S HFRKRSHSKSPRRTRSRSPLGFYVHLKNLSL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(0.672)RS(0.328)PLGFYVHLK S(3.12)RS(-3.12)PLGFY(-52.47)VHLK 1 3 0.089129 6508.4 0 0 10793 0 0 6982 0 0 9790 0 0 11180 0 0 6936.9 0 0 12515 0 0 10200 0 0 11075 0 0 10266 0 0 6160.4 0 0 10190 0 0 7057.1 0 0 10067 0 0 11115 0 0 7140.8 0 0 12635 0 0 10414 0 0 10989 0 0 9902.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18594000 18594000 0 0 NaN 2608 1429 278 278 4292 4576 4876 5413 4876 5413 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18447 4876 5413 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18447 4876 5413 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18447 Q8IY17 353 Q8IY17 Q8IY17 Neuropathy target esterase PNPLA6 sp|Q8IY17|PLPL6_HUMAN Neuropathy target esterase OS=Homo sapiens GN=PNPLA6 PE=1 SV=2 0.836585 8.48859 0.00015986 102.55 79.94 102.55 1 S QPLRLFPSPGLPTRTSPVRGSKRMVSTSATD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX LFPSPGLPT(0.045)RT(0.118)S(0.837)PVR LFPS(-53.64)PGLPT(-12.7)RT(-8.49)S(8.49)PVR 12 3 0.39023 7078.3 0 0 6687.9 0 0 7795 0 0 7174 0 0 8936.7 0 0 7358.4 0 0 9209.6 0 0 8513.9 0 0 7766.7 0 0 4574.7 0 0 6700.5 0 0 6320.6 0 0 7822.4 0 0 7339.3 0 0 9004 0 0 7390.6 0 0 9321.9 0 0 8633.1 0 0 7724.6 0 0 4504.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 46570000 46570000 0 0 NaN 2609 1430 353 353 2351 2484 2673 2985 2673 2985 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18427 2673 2985 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18427 2673 2985 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18427 Q8IY18 35 Q8IY18 Q8IY18 Structural maintenance of chromosomes protein 5 SMC5 sp|Q8IY18|SMC5_HUMAN Structural maintenance of chromosomes protein 5 OS=Homo sapiens GN=SMC5 PE=1 SV=2 1 73.0915 1.45533E-08 168.98 152.05 168.98 1 S LPRDPSSEVPSKRKNSAPQLPLLQSSGPFVE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP KNS(1)APQLPLLQSSGPFVEGSIVR KNS(73.09)APQLPLLQS(-73.09)S(-92.98)GPFVEGS(-144.04)IVR 3 4 -0.11961 6063.4 0 0 3295.9 0 0 5131.9 0 0 2200.6 0 0 5707.2 0 0 3566.4 0 0 7058.3 0 0 5266.8 0 0 4261.5 0 0 16740 0 0 5734 0 0 3107.3 0 0 5230.7 0 0 2348.3 0 0 5774.1 0 0 3566.6 0 0 7043.2 0 0 5721.5 0 0 4323.4 0 0 15885 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 42421000 42421000 0 0 NaN 2610 1431 35 35 2145 2267 2441 2718 2441 2718 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23086 2441 2718 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23086 2441 2718 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23086 Q8IY22 349 Q8IY22 Q8IY22 C-Maf-inducing protein CMIP sp|Q8IY22|CMIP_HUMAN C-Maf-inducing protein OS=Homo sapiens GN=CMIP PE=1 SV=3 0.963317 14.193 0.00149436 115.57 25.472 115.57 1 S AIYSCYEEFINSRDNSPSLKEIRNGCQQPCD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX DNS(0.963)PS(0.037)LK DNS(14.19)PS(-14.19)LK 3 2 0.85257 43773 0 0 102420 0 0 45655 0 0 97366 0 0 93677 0 0 42817 0 0 92191 0 0 79106 0 0 106230 0 0 14484 0 0 41428 0 0 96720 0 0 46449 0 0 99404 0 0 92220 0 0 45835 0 0 94298 0 0 78379 0 0 104220 0 0 15470 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 68200000 68200000 0 0 NaN 2611 1432 349 349 769 815 869 959;960 869 960 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9755 869 960 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9755 869 960 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9755 Q8IY22 377 Q8IY22 Q8IY22 C-Maf-inducing protein CMIP sp|Q8IY22|CMIP_HUMAN C-Maf-inducing protein OS=Homo sapiens GN=CMIP PE=1 SV=3 1 88.9499 5.24694E-08 166.59 144.99 166.59 1 S PCDRKPTLPLRLLHPSPDLVSQEATLSEARL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPX LLHPS(1)PDLVSQEATLSEAR LLHPS(88.95)PDLVS(-88.95)QEAT(-134.77)LS(-134.1)EAR 5 3 0.66166 4039.4 0 0 5450.3 0 0 3884 0 0 5063.5 0 0 5287.5 0 0 5190.3 0 0 5192.8 0 0 4939.4 0 0 5754 0 0 15486 0 0 3821.7 0 0 5146.5 0 0 3936.9 0 0 5224.7 0 0 5282.1 0 0 5222.8 0 0 5305.7 0 0 5431 0 0 5653.7 0 0 14696 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7240100 7240100 0 0 NaN 2612 1432 377 377 2435 2573 2767 3090 2767 3090 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19031 2767 3090 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19031 2767 3090 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19031 Q8IY33 249 Q8IY33 Q8IY33 MICAL-like protein 2 MICALL2 sp|Q8IY33|MILK2_HUMAN MICAL-like protein 2 OS=Homo sapiens GN=MICALL2 PE=1 SV=1 0.997903 26.7745 9.05153E-18 226.23 200.41 226.23 1 S GTFVCTSHLPAAASASPKLTGLVPRQPGAMG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX ATGEPGTFVCTSHLPAAAS(0.002)AS(0.998)PK AT(-181.93)GEPGT(-172.08)FVCT(-135.86)S(-129.79)HLPAAAS(-26.77)AS(26.77)PK 21 4 -0.047447 16106 0 0 23327 0 0 16348 0 0 21548 0 0 17009 0 0 16688 0 0 18837 0 0 23094 0 0 22289 0 0 26306 0 0 15241 0 0 22026 0 0 16459 0 0 22155 0 0 17251 0 0 17074 0 0 19182 0 0 23710 0 0 21846 0 0 25305 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 24918000 24918000 0 0 NaN 2613 1433 249 249 527 560 600 667;668 600 667 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15588 600 667 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15588 600 667 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15588 Q8IY33 153 Q8IY33 Q8IY33 MICAL-like protein 2 MICALL2 sp|Q8IY33|MILK2_HUMAN MICAL-like protein 2 OS=Homo sapiens GN=MICALL2 PE=1 SV=1 0.999843 38.0399 0.00621623 86.959 64.08 86.959 1 S AAKLPSPAPARKPPLSPAQTNPVVQRRNEGA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPXXXXX KPPLS(1)PAQTNPVVQR KPPLS(38.04)PAQT(-38.04)NPVVQR 5 3 0.11939 16197 0 0 42542 0 0 15064 0 0 42111 0 0 29071 0 0 17439 0 0 27036 0 0 29416 0 0 48057 0 0 54230 0 0 15322 0 0 40186 0 0 15401 0 0 42868 0 0 28665 0 0 18833 0 0 28194 0 0 30676 0 0 46526 0 0 51745 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26784000 26784000 0 0 NaN 2614 1433 153 153 2160 2282 2456 2736 2456 2736 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12836 2456 2736 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12836 2456 2736 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12836 Q8IY33 649 Q8IY33 Q8IY33 MICAL-like protein 2 MICALL2 sp|Q8IY33|MILK2_HUMAN MICAL-like protein 2 OS=Homo sapiens GN=MICALL2 PE=1 SV=1 0.982294 19.2742 0.0102436 72.793 51.479 72.793 1 S ITLTPVRPDRTPRPASPGPSLPARSPSPPRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPXXXXXXX T(0.006)PRPAS(0.982)PGPS(0.012)LPAR T(-22.07)PRPAS(19.27)PGPS(-19.27)LPAR 6 3 -0.30719 11093 0 0 10217 0 0 11992 0 0 10377 0 0 14207 0 0 11422 0 0 14482 0 0 13212 0 0 9114 0 0 3356.2 0 0 10500 0 0 9652.6 0 0 12051 0 0 10661 0 0 14285 0 0 11431 0 0 14581 0 0 13284 0 0 9220.5 0 0 3466.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12008000 12008000 0 0 NaN 2615 1433 649 649 4840 5165 5504 6122 5504 6122 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9369 5504 6122 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9369 5504 6122 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9369 Q8IY67 14 Q8IY67 Q8IY67 Ribonucleoprotein PTB-binding 1 RAVER1 sp|Q8IY67|RAVR1_HUMAN Ribonucleoprotein PTB-binding 1 OS=Homo sapiens GN=RAVER1 PE=1 SV=1 0.972753 15.6948 2.01414E-05 95.206 79.634 95.206 1 S __MAADVSVTHRPPLSPKSGAEVEAGDAAER X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPXXXXXXXXXXXXX AADVS(0.001)VT(0.026)HRPPLS(0.973)PK AADVS(-29.74)VT(-15.69)HRPPLS(15.69)PK 13 3 0.021721 19748 0 0 24243 0 0 21866 0 0 25394 0 0 17004 0 0 24041 0 0 26293 0 0 27864 0 0 27411 0 0 5853.2 0 0 18695 0 0 22908 0 0 21854 0 0 25981 0 0 17675 0 0 24216 0 0 26348 0 0 27978 0 0 26999 0 0 6156.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 270140000 270140000 0 0 NaN 2616 1434 14 14 22 24 27 35 27 35 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12795 27 35 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12795 27 35 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12795 Q8IY92 1044 Q8IY92 Q8IY92 Structure-specific endonuclease subunit SLX4 SLX4 sp|Q8IY92|SLX4_HUMAN Structure-specific endonuclease subunit SLX4 OS=Homo sapiens GN=SLX4 PE=1 SV=3 1 116.902 0.000148676 116.9 88.697 116.9 1 S PPHPCRFLLGPPQGGSPRGSHHTSGSSLSTP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX FLLGPPQGGS(1)PR FLLGPPQGGS(116.9)PR 10 2 -1.3555 13828 0 0 11157 0 0 15365 0 0 10943 0 0 9357.6 0 0 13230 0 0 9423.7 0 0 11688 0 0 11202 0 0 19553 0 0 13090 0 0 10538 0 0 15310 0 0 11286 0 0 9853.4 0 0 13176 0 0 9638.1 0 0 12373 0 0 10977 0 0 18682 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9500100 9500100 0 0 NaN 2617 1435 1044 1044 1288 1357 1460 1620 1460 1620 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19834 1460 1620 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19834 1460 1620 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19834 Q8IY92 1070 Q8IY92 Q8IY92 Structure-specific endonuclease subunit SLX4 SLX4 sp|Q8IY92|SLX4_HUMAN Structure-specific endonuclease subunit SLX4 OS=Homo sapiens GN=SLX4 PE=1 SV=3 0.840388 9.45042 0.0284731 54.656 33.993 54.656 1 S SLSTPRSRGGTSQVGSPTLLSPAVPSKQKRD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPXXXX GGT(0.034)S(0.03)QVGS(0.84)PT(0.095)LLS(0.001)PAVPSK GGT(-13.99)S(-14.48)QVGS(9.45)PT(-9.45)LLS(-30.71)PAVPS(-50.21)K 8 3 -0.82517 9072 0 0 9180.8 0 0 9976.7 0 0 10081 0 0 8843.9 0 0 9327.2 0 0 7314.7 0 0 10231 0 0 9273 0 0 48476 0 0 8587.8 0 0 8677.9 0 0 9977.2 0 0 10284 0 0 9021.9 0 0 9485.4 0 0 7572.8 0 0 11688 0 0 9066.6 0 0 45882 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20368000 20368000 0 0 NaN 2618 1435 1070 1070 1459 1536 1658 1838 1658 1838 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17612 1658 1838 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17612 1658 1838 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17612 Q8IY92 1028 Q8IY92 Q8IY92 Structure-specific endonuclease subunit SLX4 SLX4 sp|Q8IY92|SLX4_HUMAN Structure-specific endonuclease subunit SLX4 OS=Homo sapiens GN=SLX4 PE=1 SV=3 1 120.627 8.28694E-05 120.63 100.25 120.63 1 S ERGLEVSHRLAPWQASPPHPCRFLLGPPQGG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPXXXXXXXXX LAPWQAS(1)PPHPCR LAPWQAS(120.63)PPHPCR 7 3 -0.5584 5828.6 0 0 5832.1 0 0 5509.2 0 0 5121.4 0 0 5518.1 0 0 5972.4 0 0 5978.2 0 0 5830.2 0 0 5565.8 0 0 3933.5 0 0 5514.2 0 0 5505.3 0 0 5566.8 0 0 5315.5 0 0 5605.4 0 0 5954.1 0 0 6052 0 0 5972.2 0 0 5509.3 0 0 3838.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22797000 22797000 0 0 NaN 2619 1435 1028 1028 2291 2420 2604 2909 2604 2909 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15601 2604 2909 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15601 2604 2909 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15601 Q8IYB3 738 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 0.998365 27.8591 1.3193E-09 190.78 130.07 190.78 1;2 S RVSRTPEPKKIKKAASPSPQSVRRVSSSRSV X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX AAS(0.998)PS(0.002)PQSVR AAS(27.86)PS(-27.86)PQS(-66.19)VR 3 2 -0.035694 32834 31617 0 42147 29872 0 31736 31329 0 39837 29228 0 34293 35065 0 29866 32122 0 33689 37247 0 35981 33858 0 40535 29405 0 5952.3 4680.8 0 31065 29916 0 39802 28216 0 32050 31613 0 40884 30096 0 34648 35387 0 30469 32099 0 34509 37595 0 36034 34036 0 39705 29346 0 6437.5 5191.2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 387830000 343280000 44549000 0 NaN 2620 1436 738 738 73;1992 78;2106;2107 86;2270;2271 99;2535;2536;2537 86 99 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6689 86 99 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6689 86 99 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6689 Q8IYB3 743 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 0.713912 3.95861 0.00323974 90.498 67.619 90.498 2 S PEPKKIKKAASPSPQSVRRVSSSRSVSGSPE X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX KAAS(0.998)PS(0.288)PQS(0.714)VR KAAS(25.29)PS(-3.96)PQS(3.96)VR 9 3 -0.11423 0 31617 0 0 29872 0 0 31329 0 0 29228 0 0 35065 0 0 32122 0 0 37247 0 0 33858 0 0 29405 0 0 4680.8 0 0 29916 0 0 28216 0 0 31613 0 0 30096 0 0 35387 0 0 32099 0 0 37595 0 0 34036 0 0 29346 0 0 5191.2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 44549000 0 44549000 0 NaN 2621 1436 743 743 73;1992 78;2106;2107 2271 2536;2537 2271 2537 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7353 2271 2537 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7353 2271 2537 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7353 Q8IYB3 696 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 0.980774 17.0962 3.42767E-11 203.76 154.41 112.63 1 S RHSPSPRPRAPQTSSSPPPVRRGASSSPQRR X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX APQTSS(0.019)S(0.981)PPPVR APQT(-57.45)S(-40.7)S(-17.1)S(17.1)PPPVR 7 3 0.14347 96347 0 0 119850 0 0 100660 0 0 127310 0 0 119340 0 0 97632 0 0 111700 0 0 109960 0 0 130830 0 0 19302 0 0 91185 0 0 113260 0 0 101330 0 0 129790 0 0 119910 0 0 99377 0 0 114590 0 0 110400 0 0 128280 0 0 20720 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 363980000 363980000 0 0 NaN 2622 1436 696 696 365 391 423;424;425 469;470;471;472;473 424 471 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8089 423 470 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7874 423 470 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7874 Q8IYB3 626 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 1 55.196 0.00778222 73.781 39.906 55.196 2 S KRRTASPPPPPKRRASPSPPPKRRVSHSPPP X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX RRAS(1)PS(1)PPPK RRAS(55.2)PS(55.2)PPPK 4 3 -0.53838 0 93317 0 0 109560 0 0 97195 0 0 110730 0 0 106860 0 0 101590 0 0 116060 0 0 106660 0 0 111930 0 0 19094 0 0 88316 0 0 103500 0 0 97782 0 0 113470 0 0 108000 0 0 102340 0 0 117590 0 0 107370 0 0 110620 0 0 20447 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 376890000 0 376890000 0 NaN 2623 1436 626 626 487;3196;3197;3431 518;3390;3391;3644 557;3623;3624;3625;3886 621;622;4019;4020;4021;4314 3886 4314 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6222 3623 4019 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7204 3623 4019 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7204 Q8IYB3 628 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 1 55.196 0.00778222 73.781 39.906 55.196 2 S RTASPPPPPKRRASPSPPPKRRVSHSPPPKQ X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX RRAS(1)PS(1)PPPK RRAS(55.2)PS(55.2)PPPK 6 3 -0.53838 0 93317 0 0 109560 0 0 97195 0 0 110730 0 0 106860 0 0 101590 0 0 116060 0 0 106660 0 0 111930 0 0 19094 0 0 88316 0 0 103500 0 0 97782 0 0 113470 0 0 108000 0 0 102340 0 0 117590 0 0 107370 0 0 110620 0 0 20447 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 376890000 0 376890000 0 NaN 2624 1436 628 628 487;3196;3197;3431 518;3390;3391;3644 557;3623;3624;3625;3886 621;622;4019;4020;4021;4314 3886 4314 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6222 3623 4019 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7204 3623 4019 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7204 Q8IYB3 675 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 1 66.9887 0.00224846 95.094 63.908 66.989 1 S HRKGSSPSRSTREARSPQPNKRHSPSPRPRA X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX EARS(1)PQPNKR EARS(66.99)PQPNKR 4 3 -0.40226 35954 0 0 39943 0 0 38698 0 0 38887 0 0 35499 0 0 34453 0 0 41915 0 0 38851 0 0 41099 0 0 4381.8 0 0 34032 0 0 37726 0 0 38782 0 0 39921 0 0 36303 0 0 34795 0 0 42336 0 0 38932 0 0 40587 0 0 5025.1 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 682050000 682050000 0 0 NaN 2625 1436 675 675 883;884 936;937 1014;1015 1121;1122 1015 1122 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5112 1014 1121 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5774 1014 1121 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5774 Q8IYB3 260 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 0.999997 54.6111 0.00660137 80.312 61.069 80.312 1 S LKVPKPEPIPEPKEPSPEKNSKKEKEKEKTR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX EPS(1)PEKNSK EPS(54.61)PEKNS(-54.61)K 3 3 0.65653 17368 0 0 14325 0 0 18729 0 0 16610 0 0 20946 0 0 17831 0 0 20582 0 0 17639 0 0 16807 0 0 2455.7 0 0 16439 0 0 13545 0 0 18808 0 0 16935 0 0 21117 0 0 17821 0 0 20865 0 0 17774 0 0 16744 0 0 2720.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 31414000 31414000 0 0 NaN 2626 1436 260 260 1093 1151 1239 1363 1239 1363 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7675 1239 1363 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7675 1239 1363 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7675 Q8IYB3 450 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 1 55.1861 5.57867E-10 180.11 144.45 55.186 1;2 S TSGKVTKHKGTEKRESPSPAPKPRKVELSES X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY) XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX RES(1)PS(1)PAPKPR RES(55.19)PS(55.19)PAPKPR 3 3 -0.26622 98935 34007 0 115160 33699 0 102460 36289 0 111210 35025 0 111920 35369 0 104500 32510 0 118340 41638 0 109710 37585 0 117220 37397 0 9956.4 5817.2 0 93631 32188 0 108760 31842 0 103100 36411 0 114320 35841 0 113110 36032 0 105130 32774 0 120120 41967 0 110140 37680 0 115710 37080 0 11914 6347.5 0 3 2 0 3 2 0 3 2 0 3 2 0 3 2 0 3 2 0 3 2 0 3 2 0 3 2 0 3 2 0 1277100000 1160900000 116170000 0 NaN 2627 1436 450 450 1162;3227;3228 1223;3422;3423;3424 1320;3657;3658;3659 1459;4056;4057;4058;4059 3659 4059 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6336 3658 4057 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5975 3658 4057 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5975 Q8IYB3 452 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 1 55.1861 0.0289637 55.186 27.321 55.186 2 S GKVTKHKGTEKRESPSPAPKPRKVELSESEE X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX RES(1)PS(1)PAPKPR RES(55.19)PS(55.19)PAPKPR 5 3 -0.26622 0 34007 0 0 33699 0 0 36289 0 0 35025 0 0 35369 0 0 32510 0 0 41638 0 0 37585 0 0 37397 0 0 5817.2 0 0 32188 0 0 31842 0 0 36411 0 0 35841 0 0 36032 0 0 32774 0 0 41967 0 0 37680 0 0 37080 0 0 6347.5 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 116170000 0 116170000 0 NaN 2628 1436 452 452 1162;3227;3228 1223;3422;3423;3424 3659 4058;4059 3659 4059 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6336 3659 4059 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6336 3659 4059 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6336 Q8IYB3 402 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 1 61.1023 0.000269281 113.86 95.111 61.102 2 S RLSPSASPPRRRHRPSPPATPPPKTRHSPTP X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX HRPS(1)PPAT(1)PPPK HRPS(61.1)PPAT(61.1)PPPK 4 4 0.19442 0 159820 0 0 182680 0 0 167330 0 0 168160 0 0 198090 0 0 180170 0 0 193850 0 0 181430 0 0 205420 0 0 10450 0 0 151260 0 0 172480 0 0 168430 0 0 173740 0 0 199160 0 0 180090 0 0 197840 0 0 182260 0 0 202200 0 0 14038 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 1213000000 0 1213000000 0 NaN 2629 1436 402 402 1740 1835 1980;1981 2206;2207;2208 1981 2208 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7665 1980 2207 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7859 1980 2207 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7859 Q8IYB3 414 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 0.794909 5.88585 0.0412642 41.48 35.398 41.48 1 S HRPSPPATPPPKTRHSPTPQQSNRTRKSRVS X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY) XXXXXXXXXXXXXXPPPPPPPPPPXXXXXXX HS(0.795)PT(0.205)PQQSNR HS(5.89)PT(-5.89)PQQS(-38.97)NR 2 3 0.2405 218.93 0 0 0 0 0 0 0 0 389.95 0 0 0 0 0 219.3 0 0 205.79 0 0 0 0 0 477.07 0 0 1085.4 0 0 206.35 0 0 0 0 0 0 0 0 373.85 0 0 0 0 0 226.73 0 0 207.02 0 0 0 0 0 459.22 0 0 1022 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 307940 307940 0 0 NaN 2630 1436 414 414 1752 1849 1995 2223 1995 2223 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4443 1995 2223 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4443 1995 2223 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4443 Q8IYB3 901 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 0.969199 14.9785 0.0188439 73.655 67.392 73.655 1 S HLREKALRSMRKAQVSPQS____________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX KAQVS(0.969)PQS(0.031) KAQVS(14.98)PQS(-14.98) 5 2 -0.11319 64531 0 0 61656 0 0 62949 0 0 59690 0 0 62855 0 0 61940 0 0 61886 0 0 66367 0 0 58155 0 0 2906.2 0 0 61057 0 0 58233 0 0 63474 0 0 61444 0 0 63774 0 0 62047 0 0 62939 0 0 66487 0 0 57539 0 0 4272.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 807120000 807120000 0 0 NaN 2631 1436 901 901 2008 2123 2287 2554 2287 2554 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7213 2287 2554 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7213 2287 2554 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7213 Q8IYB3 904 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 0.99987 38.8516 0.0087028 90.104 84.182 90.104 1 S EKALRSMRKAQVSPQS_______________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPXXXXXXXXXXXXXXX KAQVSPQS(1) KAQVS(-38.85)PQS(38.85) 8 2 0.089887 16980 0 0 19914 0 0 16199 0 0 18835 0 0 23259 0 0 17168 0 0 23701 0 0 21203 0 0 24006 0 0 3366.2 0 0 16064 0 0 18806 0 0 16444 0 0 19378 0 0 23193 0 0 17340 0 0 24112 0 0 21213 0 0 23673 0 0 3660.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26302000 26302000 0 0 NaN 2632 1436 904 904 2008 2123 2288 2555 2288 2555 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7406 2288 2555 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7406 2288 2555 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7406 Q8IYB3 874 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 0.898381 9.46485 1.75422E-11 209.75 155.09 209.75 1 S QEEPVAAPEPKKETESEAEDNLDDLEKHLRE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPXXXX KET(0.102)ES(0.898)EAEDNLDDLEK KET(-9.46)ES(9.46)EAEDNLDDLEK 5 3 -0.37922 22416 0 0 27330 0 0 20896 0 0 27898 0 0 26918 0 0 23505 0 0 21754 0 0 24934 0 0 33897 0 0 16403 0 0 21205 0 0 25821 0 0 21192 0 0 28539 0 0 26900 0 0 23805 0 0 22724 0 0 25450 0 0 32931 0 0 16022 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 69034000 69034000 0 0 NaN 2633 1436 874 874 2049 2168 2335 2602 2335 2602 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16007 2335 2602 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16007 2335 2602 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16007 Q8IYB3 665 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 0.686707 3.45578 0.0238655 58.917 39.823 58.917 1 S KRRSPSLSSKHRKGSSPSRSTREARSPQPNK X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX KGS(0.31)S(0.687)PS(0.003)R KGS(-3.46)S(3.46)PS(-23.04)R 4 3 0.48794 15128 0 0 17833 0 0 15816 0 0 17842 0 0 15538 0 0 17301 0 0 14463 0 0 17312 0 0 20512 0 0 4675.6 0 0 14318 0 0 16846 0 0 15881 0 0 18310 0 0 15775 0 0 17375 0 0 14939 0 0 17506 0 0 19982 0 0 4803.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9760800 9760800 0 0 NaN 2634 1436 665 665 2081 2201 2370 2640 2370 2640 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5183 2370 2640 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5183 2370 2640 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5183 Q8IYB3 773 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 0.931531 11.3991 1.01152E-07 156.08 144.3 156.08 2 S EPAAKKPPAPPSPVQSQSPSTNWSPAVPVKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPPPPPPX KPPAPPS(0.069)PVQS(0.932)QS(0.859)PS(0.14)T(0.001)NWSPAVPVK KPPAPPS(-11.4)PVQS(11.4)QS(7.89)PS(-7.89)T(-29.8)NWS(-89.03)PAVPVK 11 4 0.52157 0 12044 0 0 19121 0 0 12309 0 0 18454 0 0 13311 0 0 11508 0 0 13807 0 0 14553 0 0 19825 0 0 23401 0 0 11397 0 0 18059 0 0 12392 0 0 18877 0 0 13462 0 0 11927 0 0 14195 0 0 15185 0 0 19306 0 0 22372 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 21294000 0 21294000 0 NaN 2635 1436 773 773 2159 2281 2455 2734;2735 2455 2734 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18057 2455 2734 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18057 2455 2734 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18057 Q8IYB3 775 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 0.858607 7.89471 1.01152E-07 156.08 144.3 156.08 2 S AAKKPPAPPSPVQSQSPSTNWSPAVPVKKAK X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPPPPPXXX KPPAPPS(0.069)PVQS(0.932)QS(0.859)PS(0.14)T(0.001)NWSPAVPVK KPPAPPS(-11.4)PVQS(11.4)QS(7.89)PS(-7.89)T(-29.8)NWS(-89.03)PAVPVK 13 4 0.52157 0 12044 0 0 19121 0 0 12309 0 0 18454 0 0 13311 0 0 11508 0 0 13807 0 0 14553 0 0 19825 0 0 23401 0 0 11397 0 0 18059 0 0 12392 0 0 18877 0 0 13462 0 0 11927 0 0 14195 0 0 15185 0 0 19306 0 0 22372 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 21294000 0 21294000 0 NaN 2636 1436 775 775 2159 2281 2455 2734;2735 2455 2734 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18057 2455 2734 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18057 2455 2734 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18057 Q8IYB3 429 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 0.986067 18.2348 0.0402932 47.606 34.098 47.575 2 S SPTPQQSNRTRKSRVSVSPGRTSGKVTKHKG Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX KS(0.072)RVS(0.986)VS(0.942)PGR KS(-12.03)RVS(18.23)VS(12.03)PGR 5 3 -0.40963 0 54339 0 0 47872 0 0 55475 0 0 44665 0 0 52344 0 0 50691 0 0 54510 0 0 49841 0 0 51455 0 0 11611 0 0 51422 0 0 45205 0 0 55761 0 0 46153 0 0 53331 0 0 50552 0 0 55299 0 0 50377 0 0 50900 0 0 12087 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 86714000 0 86714000 0 NaN 2637 1436 429 429 2225;4322;5285 2352;4608;5632 2533;4910 2828;2829;5454 2533 2828 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7459 4910 5454 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6852 2533 2828 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7459 Q8IYB3 431 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 0.999612 34.111 0.0126944 83.647 49.245 83.647 1;2 S TPQQSNRTRKSRVSVSPGRTSGKVTKHKGTE X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX VSVS(1)PGR VS(-34.11)VS(34.11)PGR 4 2 0.56857 27157 54339 0 28807 47872 0 26348 55475 0 26960 44665 0 26263 52344 0 27662 50691 0 31474 54510 0 27524 49841 0 28237 51455 0 5026.9 11611 0 25695 51422 0 27202 45205 0 26587 55761 0 27805 46153 0 26727 53331 0 27703 50552 0 31699 55299 0 27765 50377 0 27999 50900 0 5370.5 12087 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 366110000 279400000 86714000 0 NaN 2638 1436 431 431 2225;4322;5285 2352;4608;5632 2533;4910;6003 2828;2829;5454;6669 6003 6669 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8272 6003 6669 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8272 6003 6669 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8272 Q8IYB3 463 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 1 119.377 0.000125273 119.38 89.128 119.38 1;2 S RESPSPAPKPRKVELSESEEDKGGKMAAADS X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPXXXXXX KVELS(1)ES(1)EEDKGGK KVELS(119.38)ES(119.38)EEDKGGK 5 4 0.038743 0 79326 0 0 89281 0 0 84217 0 0 93117 0 0 102350 0 0 83991 0 0 103270 0 0 96629 0 0 100060 0 0 84711 0 0 75081 0 0 84362 0 0 84744 0 0 95228 0 0 102800 0 0 84914 0 0 104990 0 0 98989 0 0 98864 0 0 82002 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 90596000 0 90596000 0 NaN 2639 1436 463 463 2262 2390;2391 2572;2573;2574 2870;2871;2872;2873;2874;2875;2876 2573 2873 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13153 2573 2873 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13153 2573 2873 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13153 Q8IYB3 465 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 1 119.377 0.000125273 119.38 89.128 119.38 2 S SPSPAPKPRKVELSESEEDKGGKMAAADSVQ Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPXXXXXXXX KVELS(1)ES(1)EEDKGGK KVELS(119.38)ES(119.38)EEDKGGK 7 4 0.038743 0 79326 0 0 89281 0 0 84217 0 0 93117 0 0 102350 0 0 83991 0 0 103270 0 0 96629 0 0 100060 0 0 84711 0 0 75081 0 0 84362 0 0 84744 0 0 95228 0 0 102800 0 0 84914 0 0 104990 0 0 98989 0 0 98864 0 0 82002 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 90596000 0 90596000 0 NaN 2640 1436 465 465 2262 2390;2391 2572;2573 2870;2871;2872;2873;2874;2875 2573 2873 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13153 2573 2873 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13153 2573 2873 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13153 Q8IYB3 541 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 0.970921 15.236 0.0113602 83.862 55.688 83.862 1 S SRSASPSPRKRQKETSPRGRRRRSPSPPPTR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX QKET(0.029)S(0.971)PR QKET(-15.24)S(15.24)PR 5 2 0.41827 11720 0 0 12034 0 0 11987 0 0 11842 0 0 12980 0 0 11566 0 0 14002 0 0 12087 0 0 12776 0 0 1187.5 0 0 11091 0 0 11367 0 0 12069 0 0 12166 0 0 13127 0 0 11614 0 0 14170 0 0 12139 0 0 12658 0 0 1397.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 54046000 54046000 0 0 NaN 2641 1436 541 541 3054 3240 3466 3840 3466 3840 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5394 3466 3840 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5394 3466 3840 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5394 Q8IYB3 646 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 0.720533 4.11391 0.00559627 87.026 53.159 87.026 1 S PKRRVSHSPPPKQRSSPVTKRRSPSLSSKHR X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX QRS(0.279)S(0.721)PVTK QRS(-4.11)S(4.11)PVT(-42.21)K 4 3 -0.45291 23018 0 0 24685 0 0 25502 0 0 23925 0 0 26071 0 0 23124 0 0 28075 0 0 23889 0 0 25280 0 0 2146.3 0 0 21791 0 0 23315 0 0 25547 0 0 24599 0 0 26449 0 0 23227 0 0 28405 0 0 23998 0 0 25062 0 0 2573.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 87237000 87237000 0 0 NaN 2642 1436 646 646 3131 3322 3552 3937 3552 3937 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6141 3552 3937 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6141 3552 3937 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6141 Q8IYB3 713 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 0.999881 39.2551 0.000197003 108.63 83.417 108.63 1;2 S PPVRRGASSSPQRRQSPSPSTRPIRRVSRTP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX RQS(1)PSPSTRPIR RQS(39.26)PS(-39.26)PS(-61.82)T(-68.47)RPIR 3 3 -0.19566 25875 15717 0 29944 16209 0 23392 18261 0 31138 18357 0 28939 18498 0 25372 14934 0 29464 20720 0 31577 19382 0 33314 17915 0 4278.9 7328.8 0 24475 14882 0 28294 15325 0 23766 18249 0 31806 18663 0 29051 18786 0 25775 15191 0 30072 20907 0 31563 19490 0 32707 17795 0 4760 7349.5 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 294170000 178180000 115990000 0 NaN 2643 1436 713 713 3145;3427 3336;3639;3640 3567;3881;3882 3956;4308;4309;4310 3881 4308 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5503 3881 4308 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5503 3881 4308 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5503 Q8IYB3 715 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 0.68558 4.0454 0.00759151 82.707 62.6 82.707 2 S VRRGASSSPQRRQSPSPSTRPIRRVSRTPEP X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX RQS(0.997)PS(0.686)PS(0.271)T(0.046)RPIR RQS(24.55)PS(4.05)PS(-4.05)T(-11.76)RPIR 5 3 -0.042106 0 15717 0 0 16209 0 0 18261 0 0 18357 0 0 18498 0 0 14934 0 0 20720 0 0 19382 0 0 17915 0 0 7328.8 0 0 14882 0 0 15325 0 0 18249 0 0 18663 0 0 18786 0 0 15191 0 0 20907 0 0 19490 0 0 17795 0 0 7349.5 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 115990000 0 115990000 0 NaN 2644 1436 715 715 3145;3427 3336;3639;3640 3882 4309;4310 3882 4310 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5955 3882 4310 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5955 3882 4310 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5955 Q8IYB3 683 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 1 60.3012 0.019684 60.301 25.927 60.301 2 S RSTREARSPQPNKRHSPSPRPRAPQTSSSPP X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX RHS(1)PS(1)PRPR RHS(60.3)PS(60.3)PRPR 3 3 0.085077 0 1070.8 0 0 1520.3 0 0 1594.9 0 0 1991.3 0 0 1873.1 0 0 1126.9 0 0 1199.9 0 0 2452.7 0 0 2586.6 0 0 21767 0 0 1013 0 0 1438.9 0 0 1577.9 0 0 2002 0 0 1876.2 0 0 1217 0 0 1291.7 0 0 3064.7 0 0 2493.4 0 0 20553 0 0 2 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 4 0 0 3 0 0 4 0 10509000 0 10509000 0 NaN 2645 1436 683 683 3265 3463 3699;3700 4106;4107;4108;4109 3700 4107 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4288 3700 4107 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4288 3700 4107 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4288 Q8IYB3 685 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 1 60.3012 0.019684 60.301 25.927 60.301 2 S TREARSPQPNKRHSPSPRPRAPQTSSSPPPV X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX RHS(1)PS(1)PRPR RHS(60.3)PS(60.3)PRPR 5 3 0.085077 0 1070.8 0 0 1520.3 0 0 1594.9 0 0 1991.3 0 0 1873.1 0 0 1126.9 0 0 1199.9 0 0 2452.7 0 0 2586.6 0 0 21767 0 0 1013 0 0 1438.9 0 0 1577.9 0 0 2002 0 0 1876.2 0 0 1217 0 0 1291.7 0 0 3064.7 0 0 2493.4 0 0 20553 0 0 2 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 4 0 0 3 0 0 4 0 10509000 0 10509000 0 NaN 2646 1436 685 685 3265 3463 3699;3700 4106;4107;4108;4109 3700 4107 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4288 3700 4107 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4288 3700 4107 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4288 Q8IYB3 389 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 0.992703 21.2532 2.01283E-06 141.45 118.89 141.45 2 S PPKRTSSPPRKTRRLSPSASPPRRRHRPSPP X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX RLS(0.993)PS(0.026)AS(0.981)PPR RLS(21.25)PS(-17.12)AS(17.12)PPR 3 2 0.073084 0 148010 0 0 171110 0 0 153340 0 0 156240 0 0 152650 0 0 140680 0 0 160490 0 0 157470 0 0 164350 0 0 7949.7 0 0 140070 0 0 161560 0 0 154110 0 0 161080 0 0 155070 0 0 141930 0 0 163090 0 0 157540 0 0 162000 0 0 11130 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 320080000 0 320080000 0 NaN 2647 1436 389 389 3338 3540 3777 4194;4195 3777 4195 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8775 3777 4195 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8775 3777 4195 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8775 Q8IYB3 393 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 0.981103 17.1209 2.01283E-06 141.45 118.89 141.45 2 S TSSPPRKTRRLSPSASPPRRRHRPSPPATPP X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX RLS(0.993)PS(0.026)AS(0.981)PPR RLS(21.25)PS(-17.12)AS(17.12)PPR 7 2 0.073084 0 148010 0 0 171110 0 0 153340 0 0 156240 0 0 152650 0 0 140680 0 0 160490 0 0 157470 0 0 164350 0 0 7949.7 0 0 140070 0 0 161560 0 0 154110 0 0 161080 0 0 155070 0 0 141930 0 0 163090 0 0 157540 0 0 162000 0 0 11130 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 320080000 0 320080000 0 NaN 2648 1436 393 393 3338 3540 3777 4194;4195 3777 4195 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8775 3777 4195 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8775 3777 4195 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8775 Q8IYB3 653 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 0.999999 62.5496 5.48162E-06 152.16 116.94 100.73 1;2 S SPPPKQRSSPVTKRRSPSLSSKHRKGSSPSR Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX RRS(1)PS(0.997)LS(0.003)SK RRS(62.55)PS(24.82)LS(-24.82)S(-38.69)K 3 3 -0.055444 101020 88485 0 124230 68519 0 106450 93753 0 127010 62904 0 129060 78106 0 101900 93684 0 143760 79636 0 120780 86401 0 131870 71881 0 10999 9904.1 0 95607 83749 0 117380 64695 0 107180 93912 0 129840 65425 0 129830 80200 0 103520 92458 0 145300 80776 0 120750 87247 0 130620 71253 0 13152 11326 0 3 2 0 3 2 0 3 2 0 3 2 0 3 2 0 3 2 0 3 2 0 3 2 0 3 2 0 3 2 0 1151700000 1017100000 134650000 0 NaN 2649 1436 653 653 3449;3483;4180 3663;3664;3700;4455 3906;3907;3946;4748 4338;4339;4340;4383;5267 3907 4339 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6849 3906 4338 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6335 3906 4338 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6335 Q8IYB3 655 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 0.996578 24.8161 0.000722302 100.73 68.473 100.73 2 S PPKQRSSPVTKRRSPSLSSKHRKGSSPSRST X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX RRS(1)PS(0.997)LS(0.003)SK RRS(62.55)PS(24.82)LS(-24.82)S(-38.69)K 5 3 -0.055444 0 88485 0 0 68519 0 0 93753 0 0 62904 0 0 78106 0 0 93684 0 0 79636 0 0 86401 0 0 71881 0 0 9904.1 0 0 83749 0 0 64695 0 0 93912 0 0 65425 0 0 80200 0 0 92458 0 0 80776 0 0 87247 0 0 71253 0 0 11326 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 134650000 0 134650000 0 NaN 2650 1436 655 655 3449;3483;4180 3663;3664;3700;4455 3907 4339;4340 3907 4339 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6849 3907 4339 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6849 3907 4339 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6849 Q8IYB3 560 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 1 49.1875 0.0388211 49.188 26.654 49.188 2 S RRRRSPSPPPTRRRRSPSPAPPPRRRRTPTP X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX RRS(1)PS(1)PAPPPR RRS(49.19)PS(49.19)PAPPPR 3 3 0.053824 0 3551.2 0 0 3257.5 0 0 2652.6 0 0 3146 0 0 3868.6 0 0 2875.6 0 0 3536.8 0 0 3606.1 0 0 3707.2 0 0 2323.4 0 0 3357 0 0 3076.6 0 0 2736.9 0 0 3232.7 0 0 3849.5 0 0 2907.9 0 0 3620.7 0 0 3658.9 0 0 3650.6 0 0 2271.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 23149000 0 23149000 0 NaN 2651 1436 560 560 3450 3665 3908 4341 3908 4341 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5249 3908 4341 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5249 3908 4341 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5249 Q8IYB3 562 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 1 49.1875 0.0388211 49.188 26.654 49.188 2 S RRSPSPPPTRRRRSPSPAPPPRRRRTPTPPP X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX RRS(1)PS(1)PAPPPR RRS(49.19)PS(49.19)PAPPPR 5 3 0.053824 0 3551.2 0 0 3257.5 0 0 2652.6 0 0 3146 0 0 3868.6 0 0 2875.6 0 0 3536.8 0 0 3606.1 0 0 3707.2 0 0 2323.4 0 0 3357 0 0 3076.6 0 0 2736.9 0 0 3232.7 0 0 3849.5 0 0 2907.9 0 0 3620.7 0 0 3658.9 0 0 3650.6 0 0 2271.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 23149000 0 23149000 0 NaN 2652 1436 562 562 3450 3665 3908 4341 3908 4341 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5249 3908 4341 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5249 3908 4341 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5249 Q8IYB3 549 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 0.999987 48.9943 0.00625844 85.287 52.083 85.287 2 S RKRQKETSPRGRRRRSPSPPPTRRRRSPSPA X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX RRS(1)PS(0.999)PPPT(0.001)R RRS(48.99)PS(28.83)PPPT(-28.83)R 3 3 0.0041045 0 5207.9 0 0 6016.6 0 0 5005.2 0 0 5434.6 0 0 7316.4 0 0 5061.1 0 0 5617.6 0 0 5963.8 0 0 6688.1 0 0 3401.5 0 0 4927.2 0 0 5680.4 0 0 5076.7 0 0 5609.6 0 0 7265.2 0 0 5107.3 0 0 5829.1 0 0 6049.6 0 0 6553.7 0 0 3341 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 11509000 0 11509000 0 NaN 2653 1436 549 549 3451 3666 3909 4342 3909 4342 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4905 3909 4342 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4905 3909 4342 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4905 Q8IYB3 551 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 0.998692 28.827 0.00625844 85.287 52.083 85.287 2 S RQKETSPRGRRRRSPSPPPTRRRRSPSPAPP X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX RRS(1)PS(0.999)PPPT(0.001)R RRS(48.99)PS(28.83)PPPT(-28.83)R 5 3 0.0041045 0 5207.9 0 0 6016.6 0 0 5005.2 0 0 5434.6 0 0 7316.4 0 0 5061.1 0 0 5617.6 0 0 5963.8 0 0 6688.1 0 0 3401.5 0 0 4927.2 0 0 5680.4 0 0 5076.7 0 0 5609.6 0 0 7265.2 0 0 5107.3 0 0 5829.1 0 0 6049.6 0 0 6553.7 0 0 3341 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 11509000 0 11509000 0 NaN 2654 1436 551 551 3451 3666 3909 4342 3909 4342 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4905 3909 4342 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4905 3909 4342 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4905 Q8IYB3 616 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 1 100.552 0.000148881 121.02 101.89 100.55 1;2 S QRRYSPSPPPKRRTASPPPPPKRRASPSPPP X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX T(1)AS(1)PPPPPKR T(100.55)AS(100.55)PPPPPKR 3 3 -0.061559 76676 127030 0 80208 133710 0 75392 133040 0 75221 138750 0 93319 128750 0 82463 126700 0 90731 119740 0 82531 131180 0 85653 155620 0 5856.9 19778 0 72551 120220 0 75742 126340 0 76204 133550 0 77656 141970 0 93601 130820 0 82345 127630 0 92342 123300 0 82959 132000 0 84729 152030 0 7425.1 21659 0 3 6 0 3 6 0 3 6 0 3 6 0 3 6 0 3 6 0 3 6 0 3 6 0 3 6 0 3 6 0 485600000 308720000 176880000 0 NaN 2655 1436 616 616 3457;3516;4637;4638 3673;3733;4946;4947;4948;4949 3919;5268;5269;5270;5271;5272 4354;5851;5852;5853;5854;5855;5856;5857;5858 5271 5856 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7326 5272 5858 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7380 5272 5858 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7380 Q8IYB3 583 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 1 80.9595 0.0143267 80.96 66.273 80.96 2 S RRRRTPTPPPRRRTPSPPPRRRSPSPRRYSP X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX RRT(1)PS(1)PPPR RRT(80.96)PS(80.96)PPPR 5 3 -0.01572 0 39101 0 0 43995 0 0 37816 0 0 38544 0 0 44337 0 0 38408 0 0 48884 0 0 37574 0 0 46235 0 0 8251.8 0 0 36995 0 0 41529 0 0 38241 0 0 39907 0 0 44670 0 0 38510 0 0 49469 0 0 37971 0 0 45733 0 0 8639.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 82374000 0 82374000 0 NaN 2656 1436 583 583 3459 3675 3921 4356 3921 4356 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5076 3921 4356 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5076 3921 4356 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5076 Q8IYB3 636 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 1 48.1774 0.00774695 73.927 54.852 48.177 2 S PKRRASPSPPPKRRVSHSPPPKQRSSPVTKR X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX RVS(1)HS(1)PPPKQR RVS(48.18)HS(48.18)PPPKQR 3 3 -0.64459 0 185370 0 0 186690 0 0 196280 0 0 180860 0 0 168320 0 0 186590 0 0 173150 0 0 179110 0 0 196650 0 0 30931 0 0 175450 0 0 176330 0 0 196690 0 0 186140 0 0 172560 0 0 186740 0 0 176670 0 0 180880 0 0 193030 0 0 33270 0 0 9 0 0 9 0 0 9 0 0 9 0 0 9 0 0 9 0 0 9 0 0 9 0 0 9 0 0 9 0 520870000 0 520870000 0 NaN 2657 1436 636 636 3461;3555;3556 3677;3774;3775 3923;4020;4021;4022;4023;4024 4358;4463;4464;4465;4466;4467;4468;4469;4470 4024 4470 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5409 3923 4358 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5616 4020 4463 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6322 Q8IYB3 638 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 1 48.1774 0.00774695 73.927 54.852 48.177 2 S RRASPSPPPKRRVSHSPPPKQRSSPVTKRRS X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY) XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX RVS(1)HS(1)PPPKQR RVS(48.18)HS(48.18)PPPKQR 5 3 -0.64459 0 185370 0 0 186690 0 0 196280 0 0 180860 0 0 168320 0 0 186590 0 0 173150 0 0 179110 0 0 196650 0 0 30931 0 0 175450 0 0 176330 0 0 196690 0 0 186140 0 0 172560 0 0 186740 0 0 176670 0 0 180880 0 0 193030 0 0 33270 0 0 9 0 0 9 0 0 9 0 0 9 0 0 9 0 0 9 0 0 9 0 0 9 0 0 9 0 0 9 0 520870000 0 520870000 0 NaN 2658 1436 638 638 3461;3555;3556 3677;3774;3775 3923;4020;4021;4022;4023;4024 4358;4463;4464;4465;4466;4467;4468;4469;4470 4024 4470 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5409 3923 4358 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5616 4020 4463 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6322 Q8IYB3 725 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 1 96.8656 0.00385893 96.866 66.137 96.866 1;2 S RRQSPSPSTRPIRRVSRTPEPKKIKKAASPS X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX RVS(1)RT(1)PEPK RVS(96.87)RT(96.87)PEPK 3 3 -0.67427 30494 137070 0 38419 131760 0 32610 140870 0 39097 128420 0 60918 141610 0 33387 133830 0 59584 148570 0 45763 131110 0 35755 138910 0 1244.8 6857.8 0 28863 129710 0 36297 124450 0 33059 141650 0 40010 132150 0 60107 143750 0 33878 133890 0 60063 150630 0 45461 131820 0 36290 137470 0 2231.3 9491.7 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 977950000 52039000 925910000 0 NaN 2659 1436 725 725 3559;5271 3778;3779;5617 4027;4028;4029 4473;4474;4475;4476 4028 4474 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6716 4028 4474 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6716 4028 4474 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6716 Q8IYB3 597 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 0.999999 60.1414 0.000366605 126.71 75.759 126.71 1 S PSPPPRRRSPSPRRYSPPIQRRYSPSPPPKR X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX RYS(1)PPIQR RY(-60.14)S(60.14)PPIQR 3 3 -0.50997 163190 0 0 178710 0 0 179450 0 0 154630 0 0 247410 0 0 172770 0 0 280550 0 0 200560 0 0 174790 0 0 7003.5 0 0 154480 0 0 168680 0 0 180650 0 0 160530 0 0 247430 0 0 172730 0 0 281090 0 0 200310 0 0 176950 0 0 11236 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 755380000 755380000 0 0 NaN 2660 1436 597 597 3568;5432 3790;5785 4042;6176 4494;4495;6873 4042 4495 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8774 4042 4495 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8774 4042 4495 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8774 Q8IYB3 605 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 0.999907 40.3363 0.000103506 128.61 114.65 128.61 2 S SPSPRRYSPPIQRRYSPSPPPKRRTASPPPP X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX RYS(1)PS(1)PPPK RY(-40.34)S(40.34)PS(54.4)PPPK 3 2 0.2563 0 228060 0 0 241790 0 0 210550 0 0 228940 0 0 252010 0 0 215690 0 0 264430 0 0 261290 0 0 255400 0 0 12671 0 0 215740 0 0 228330 0 0 213550 0 0 235640 0 0 253460 0 0 217380 0 0 268320 0 0 260700 0 0 252380 0 0 17978 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 642500000 0 642500000 0 NaN 2661 1436 605 605 3569 3791;3792 4044;4045 4497;4498;4499;4500 4045 4500 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9487 4045 4500 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9487 4045 4500 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9487 Q8IYB3 607 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 0.999996 54.4016 0.000103506 128.61 114.65 128.61 1;2 S SPRRYSPPIQRRYSPSPPPKRRTASPPPPPK X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX RYS(1)PS(1)PPPK RY(-40.34)S(40.34)PS(54.4)PPPK 5 2 0.2563 11517 228060 0 12606 241790 0 10361 210550 0 11370 228940 0 12155 252010 0 10728 215690 0 15075 264430 0 13306 261290 0 12256 255400 0 1516.8 12671 0 10894 215740 0 11901 228330 0 10526 213550 0 11739 235640 0 12267 253460 0 10817 217380 0 15127 268320 0 13292 260700 0 12213 252380 0 1736.2 17978 0 1 4 0 1 4 0 1 4 0 1 4 0 1 4 0 1 4 0 1 4 0 1 4 0 1 4 0 1 4 0 662640000 20141000 642500000 0 NaN 2662 1436 607 607 3569 3791;3792 4043;4044;4045 4496;4497;4498;4499;4500 4045 4500 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9487 4045 4500 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9487 4045 4500 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9487 Q8IYB3 756 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 0.975903 16.3471 1.82607E-07 171.2 104.05 171.2 1 S PQSVRRVSSSRSVSGSPEPAAKKPPAPPSPV X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX S(0.001)VS(0.023)GS(0.976)PEPAAK S(-28.23)VS(-16.35)GS(16.35)PEPAAK 5 2 0.57971 32954 0 0 42742 0 0 29100 0 0 37882 0 0 24807 0 0 28027 0 0 24949 0 0 31390 0 0 42455 0 0 4947.2 0 0 31168 0 0 40350 0 0 29472 0 0 39034 0 0 25446 0 0 28584 0 0 25869 0 0 31505 0 0 41148 0 0 5384.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 51416000 51416000 0 0 NaN 2663 1436 756 756 4566 4870 5187 5759 5187 5759 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8864 5187 5759 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8864 5187 5759 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8864 Q8IYB3 380 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 0.935835 14.6493 0.0131427 72.879 15.157 72.879 1 S SRSRSPPKKPPKRTSSPPRKTRRLSPSASPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX T(0.032)S(0.032)S(0.936)PPRK T(-14.65)S(-14.65)S(14.65)PPRK 3 3 0.081446 20329 0 0 20560 0 0 19252 0 0 20765 0 0 23958 0 0 21263 0 0 22569 0 0 21947 0 0 22858 0 0 3270 0 0 19232 0 0 19423 0 0 19502 0 0 21316 0 0 24015 0 0 21306 0 0 23048 0 0 22086 0 0 22542 0 0 3587.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 223350000 223350000 0 0 NaN 2664 1436 380 380 4967 5296 5642 6271 5642 6271 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6190 5642 6271 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6190 5642 6271 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6190 Q8IYH5 391 Q8IYH5 Q8IYH5 ZZ-type zinc finger-containing protein 3 ZZZ3 sp|Q8IYH5|ZZZ3_HUMAN ZZ-type zinc finger-containing protein 3 OS=Homo sapiens GN=ZZZ3 PE=1 SV=1 0.93383 11.8616 0.0109793 65.809 42.433 65.809 1 S YTLRTSPRRAAPTRGSPTKNSSPYRENGQFE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX AAPT(0.005)RGS(0.934)PT(0.061)K AAPT(-22.43)RGS(11.86)PT(-11.86)K 7 3 0.16715 13745 0 0 13446 0 0 14520 0 0 12987 0 0 15038 0 0 13949 0 0 15691 0 0 13328 0 0 13779 0 0 2284.8 0 0 13009 0 0 12699 0 0 14584 0 0 13378 0 0 15238 0 0 13935 0 0 15888 0 0 13462 0 0 13677 0 0 2459.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21297000 21297000 0 0 NaN 2665 1437 391 391 53 57 62 74 62 74 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6286 62 74 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6286 62 74 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6286 Q8IYM9 87 Q8IYM9 Q8IYM9 E3 ubiquitin-protein ligase TRIM22 TRIM22 sp|Q8IYM9|TRI22_HUMAN E3 ubiquitin-protein ligase TRIM22 OS=Homo sapiens GN=TRIM22 PE=1 SV=1 1 132.624 0.00028452 132.62 95.433 132.62 1 S RHLANIVERVKEVKMSPQEGQKRDVCEHHGK X;X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPXXXXXXXXX MS(1)PQEGQK MS(132.62)PQEGQK 2 2 0.55326 56020 0 0 10550 0 0 55999 0 0 14606 0 0 30236 0 0 57448 0 0 32863 0 0 33620 0 0 12469 0 0 9314.1 0 0 53009 0 0 9989.5 0 0 56078 0 0 15438 0 0 32223 0 0 55390 0 0 32768 0 0 34927 0 0 13168 0 0 9548.4 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 25594000 25594000 0 0 NaN 2666 1438 87 87 2747 2913;2914 3123;3124 3470;3471 3124 3471 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8932 3124 3471 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8932 3124 3471 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8932 Q8IZ21 443 Q8IZ21 Q8IZ21 Phosphatase and actin regulator 4 PHACTR4 sp|Q8IZ21|PHAR4_HUMAN Phosphatase and actin regulator 4 OS=Homo sapiens GN=PHACTR4 PE=1 SV=1 0.999997 55.5164 1.01036E-07 144.55 133.69 144.55 1 S PLPMTPILEGSHRAHSLLFENSDSFSEDSST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP AHS(1)LLFENSDSFSEDSSTLGR AHS(55.52)LLFENS(-55.52)DS(-84.2)FS(-109.12)EDS(-126.8)S(-129.12)T(-129.06)LGR 3 3 0.39917 7516 0 0 8686.2 0 0 7748.3 0 0 8330.5 0 0 10276 0 0 7473.4 0 0 11636 0 0 8720.7 0 0 10306 0 0 28618 0 0 7112.9 0 0 8203.5 0 0 7822.2 0 0 8561.4 0 0 10297 0 0 7598.8 0 0 11742 0 0 9561.4 0 0 10225 0 0 27149 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14384000 14384000 0 0 NaN 2667 1439 443 443 242 257 275 306 275 306 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18390 275 306 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18390 275 306 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18390 Q8IZ21 628 Q8IZ21 Q8IZ21 Phosphatase and actin regulator 4 PHACTR4 sp|Q8IZ21|PHAR4_HUMAN Phosphatase and actin regulator 4 OS=Homo sapiens GN=PHACTR4 PE=1 SV=1 0.999075 30.3353 0.0173356 71.592 43.879 71.592 1 S QAEKREIKRRLTRKLSQRPTVAELLARKILR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX KLS(0.999)QRPT(0.001)VAELLAR KLS(30.34)QRPT(-30.34)VAELLAR 3 3 0.059817 10330 0 0 12150 0 0 11483 0 0 11955 0 0 8496 0 0 11341 0 0 9099.4 0 0 11183 0 0 12212 0 0 6659 0 0 9779.3 0 0 11477 0 0 11461 0 0 12277 0 0 8809.6 0 0 11406 0 0 9318.7 0 0 11424 0 0 11917 0 0 6529.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37880000 37880000 0 0 NaN 2668 1439 628 628 2133 2254 2427 2704 2427 2704 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17381 2427 2704 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17381 2427 2704 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17381 Q8IZ21 590 Q8IZ21 Q8IZ21 Phosphatase and actin regulator 4 PHACTR4 sp|Q8IZ21|PHAR4_HUMAN Phosphatase and actin regulator 4 OS=Homo sapiens GN=PHACTR4 PE=1 SV=1 0.999641 34.4448 0.000273504 104.86 75.989 104.86 1 S NEIRHQIGNTLIRRLSQRPTPEELEQRNILQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX RLS(1)QRPTPEELEQR RLS(34.44)QRPT(-34.44)PEELEQR 3 3 -0.29942 26955 0 0 31261 0 0 29157 0 0 31026 0 0 19922 0 0 25811 0 0 21055 0 0 27102 0 0 30664 0 0 5160.5 0 0 25514 0 0 29530 0 0 29122 0 0 31787 0 0 20787 0 0 26130 0 0 21640 0 0 27291 0 0 29848 0 0 5486.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21736000 21736000 0 0 NaN 2669 1439 590 590 3341 3543 3780 4198 3780 4198 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10268 3780 4198 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10268 3780 4198 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10268 Q8IZ21 464 Q8IZ21 Q8IZ21 Phosphatase and actin regulator 4 PHACTR4 sp|Q8IZ21|PHAR4_HUMAN Phosphatase and actin regulator 4 OS=Homo sapiens GN=PHACTR4 PE=1 SV=1 0.99971 35.3748 0.000189429 112.5 77.611 112.5 1 S SDSFSEDSSTLGRTRSLPITIEMLKVPDDEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPXXXXXX S(1)LPITIEMLK S(35.37)LPIT(-35.37)IEMLK 1 3 -0.51807 7563.1 0 0 4617.1 0 0 5377 0 0 4169.1 0 0 9678.5 0 0 7373.2 0 0 7313.6 0 0 7618.4 0 0 5091 0 0 12289 0 0 7148.4 0 0 4359 0 0 5588.2 0 0 4359.5 0 0 9532.3 0 0 7273.7 0 0 7497.3 0 0 8002.6 0 0 5117.5 0 0 11748 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 35231000 35231000 0 0 NaN 2670 1439 464 464 3962;4900 4221;5225 4504 5006 4504 5006 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23796 4504 5006 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23796 4504 5006 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23796 Q8IZ21 344 Q8IZ21 Q8IZ21 Phosphatase and actin regulator 4 PHACTR4 sp|Q8IZ21|PHAR4_HUMAN Phosphatase and actin regulator 4 OS=Homo sapiens GN=PHACTR4 PE=1 SV=1 0.60029 1.76618 2.40433E-12 188.8 169.27 188.8 2 S SMGSELLPMISPRSPSPPLPTHIPPEPPRTP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.4)PS(0.6)PPLPTHIPPEPPRT(1)PPFPAK S(-1.77)PS(1.77)PPLPT(-55.34)HIPPEPPRT(92.36)PPFPAK 3 4 0.53335 0 25959 0 0 33581 0 0 28253 0 0 39682 0 0 35401 0 0 28625 0 0 34175 0 0 36579 0 0 38298 0 0 138850 0 0 24572 0 0 31758 0 0 28403 0 0 40194 0 0 35490 0 0 29547 0 0 34959 0 0 40566 0 0 37614 0 0 131590 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 32582000 0 32582000 0 NaN 2671 1439 344 344 4189 4464 4758 5279;5280;5281;5282;5283 4758 5283 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19400 4758 5283 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19400 4758 5283 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19400 Q8IZ21 118 Q8IZ21 Q8IZ21 Phosphatase and actin regulator 4 PHACTR4 sp|Q8IZ21|PHAR4_HUMAN Phosphatase and actin regulator 4 OS=Homo sapiens GN=PHACTR4 PE=1 SV=1 0.861357 10.0403 1.86752E-10 184.51 151.28 184.51 1 S LKNGHTTPIGNARSSSPVQVEEEPVRLASLR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX S(0.053)S(0.085)S(0.861)PVQVEEEPVR S(-12.08)S(-10.04)S(10.04)PVQVEEEPVR 3 2 -0.18362 23741 0 0 39312 0 0 22930 0 0 40505 0 0 45893 0 0 27684 0 0 47734 0 0 38862 0 0 44305 0 0 10182 0 0 22462 0 0 37143 0 0 23421 0 0 41310 0 0 45239 0 0 28480 0 0 48407 0 0 38855 0 0 43861 0 0 10487 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 194010000 194010000 0 0 NaN 2672 1439 118 118 4456 4747 5052 5606 5052 5606 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10722 5052 5606 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10722 5052 5606 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10722 Q8IZ40 63 Q8IZ40 Q8IZ40 REST corepressor 2 RCOR2 sp|Q8IZ40|RCOR2_HUMAN REST corepressor 2 OS=Homo sapiens GN=RCOR2 PE=1 SV=2 1 139.284 4.59949E-11 187.78 167.34 187.78 1 S VGTNYQAVIPECKPESPARYSNKELKGMLVW X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX VGTNYQAVIPECKPES(1)PAR VGT(-139.28)NY(-143.84)QAVIPECKPES(139.28)PAR 16 3 0.53788 17942 0 0 11053 0 0 19192 0 0 10415 0 0 4938 0 0 18646 0 0 5176.8 0 0 13106 0 0 13082 0 0 11286 0 0 16982 0 0 10438 0 0 19079 0 0 10865 0 0 5863.6 0 0 18275 0 0 5474.5 0 0 13701 0 0 12572 0 0 10930 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26571000 26571000 0 0 NaN 2673 1440 63 63 5128 5465 5821 6472 5821 6472 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15486 5821 6472 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15486 5821 6472 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15486 Q8IZ73 68 Q8IZ73 Q8IZ73 RNA pseudouridylate synthase domain-containing protein 2 RPUSD2 sp|Q8IZ73|RUSD2_HUMAN RNA pseudouridylate synthase domain-containing protein 2 OS=Homo sapiens GN=RPUSD2 PE=1 SV=2 1 89.1361 0.00430683 89.136 75.736 89.136 1 S HQQNGDAGGDAKVELSPGPPKPAGREVEPAP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX VELS(1)PGPPKPAGR VELS(89.14)PGPPKPAGR 4 3 0.31734 22877 0 0 28406 0 0 25399 0 0 24407 0 0 17052 0 0 22057 0 0 17958 0 0 23728 0 0 28135 0 0 4612.1 0 0 21657 0 0 26811 0 0 25330 0 0 25266 0 0 17819 0 0 22243 0 0 18515 0 0 23875 0 0 27329 0 0 4892 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 64254000 64254000 0 0 NaN 2674 1441 68 68 5094 5430 5782 6426 5782 6426 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12774 5782 6426 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12774 5782 6426 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12774 Q8IZD2 1002 Q8IZD2 Q8IZD2 Histone-lysine N-methyltransferase 2E KMT2E sp|Q8IZD2|KMT2E_HUMAN Histone-lysine N-methyltransferase 2E OS=Homo sapiens GN=KMT2E PE=1 SV=1 0.905579 9.83867 0.0208739 66.27 27.122 66.27 1 S LTELGLQEIKTIGYTSPRSRTEVNRQCPGEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPXXXXXXXXXXXXX TIGYT(0.094)S(0.906)PR T(-37.87)IGY(-34.98)T(-9.84)S(9.84)PR 6 2 0.24409 19320 0 0 21157 0 0 17222 0 0 24137 0 0 16035 0 0 19360 0 0 18637 0 0 19695 0 0 23464 0 0 5769.6 0 0 18274 0 0 20004 0 0 17453 0 0 24524 0 0 16384 0 0 19634 0 0 18978 0 0 19917 0 0 22947 0 0 5888.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18307000 18307000 0 0 NaN 2675 1442 1002 1002 4748 5064 5397 6001 5397 6001 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10120 5397 6001 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10120 5397 6001 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10120 Q8IZD4 448 Q8IZD4 Q8IZD4 mRNA-decapping enzyme 1B DCP1B sp|Q8IZD4|DCP1B_HUMAN mRNA-decapping enzyme 1B OS=Homo sapiens GN=DCP1B PE=1 SV=2 0.999993 51.8109 6.7535E-08 143.06 121.93 143.06 1 S TLPISGSQTGSSGVISPQELLKKLQIVQQEQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPXXXXXXXXX QTLPISGSQTGSSGVIS(1)PQELLK QT(-112.53)LPIS(-100.59)GS(-96.35)QT(-80.76)GS(-62.06)S(-51.81)GVIS(51.81)PQELLK 17 3 -0.62927 3299.4 0 0 2768.8 0 0 2664.7 0 0 3361.7 0 0 3285.7 0 0 3131.6 0 0 3796.6 0 0 4001.4 0 0 3953.3 0 0 27631 0 0 3119.7 0 0 2618.9 0 0 2728.3 0 0 3411.8 0 0 3305.1 0 0 3212.1 0 0 3844.4 0 0 4812.5 0 0 3894.1 0 0 26110 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6290100 6290100 0 0 NaN 2676 1443 448 448 3155 3347 3578 3968 3578 3968 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22506 3578 3968 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22506 3578 3968 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22506 Q8IZD4 275 Q8IZD4 Q8IZD4 mRNA-decapping enzyme 1B DCP1B sp|Q8IZD4|DCP1B_HUMAN mRNA-decapping enzyme 1B OS=Homo sapiens GN=DCP1B PE=1 SV=2 0.977006 16.3624 0.000851664 118.91 90.181 118.91 1 S QQEKLPIRQGVVRSLSYEEPRRHSPPIEKQL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX S(0.023)LS(0.977)YEEPR S(-16.36)LS(16.36)Y(-33.7)EEPR 3 2 -0.1513 79158 0 0 46159 0 0 74969 0 0 44594 0 0 59728 0 0 76317 0 0 56034 0 0 60655 0 0 44398 0 0 15159 0 0 74888 0 0 43596 0 0 75536 0 0 46393 0 0 61448 0 0 74913 0 0 56896 0 0 61905 0 0 44301 0 0 15677 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 82936000 82936000 0 0 NaN 2677 1443 275 275 4009 4274 4562 5070 4562 5070 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11065 4562 5070 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11065 4562 5070 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11065 Q8IZD4 511 Q8IZD4 Q8IZD4 mRNA-decapping enzyme 1B DCP1B sp|Q8IZD4|DCP1B_HUMAN mRNA-decapping enzyme 1B OS=Homo sapiens GN=DCP1B PE=1 SV=2 1 68.0213 1.68013E-07 151.42 118.34 151.42 1 S KTPNTEQQTPLFQVISPQRIPATAAPSLLMS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX TPNTEQQTPLFQVIS(1)PQR T(-101.21)PNT(-95.71)EQQT(-68.02)PLFQVIS(68.02)PQR 15 3 -0.27268 5600.5 0 0 4589.9 0 0 5493.1 0 0 4914.2 0 0 5104.4 0 0 6526.9 0 0 5125.3 0 0 5662.2 0 0 5655.1 0 0 15607 0 0 5299.1 0 0 4337.8 0 0 5532.7 0 0 5051.9 0 0 5203.7 0 0 6488.9 0 0 5230.7 0 0 6183.4 0 0 5557.4 0 0 14827 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11759000 11759000 0 0 NaN 2678 1443 511 511 4830 5155 5494 6112 5494 6112 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19172 5494 6112 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19172 5494 6112 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19172 Q8IZL8 481 Q8IZL8 Q8IZL8 Proline-, glutamic acid- and leucine-rich protein 1 PELP1 sp|Q8IZL8|PELP1_HUMAN Proline-, glutamic acid- and leucine-rich protein 1 OS=Homo sapiens GN=PELP1 PE=1 SV=2 0.97671 16.2263 1.38074E-10 180.13 151.66 180.13 1 S ISPPADALKLRSPRGSPDGSLQTGKPSAPKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPX GS(0.977)PDGS(0.023)LQTGKPSAPK GS(16.23)PDGS(-16.23)LQT(-56.7)GKPS(-92.64)APK 2 3 0.71957 47156 0 0 62458 0 0 49078 0 0 68180 0 0 47663 0 0 51451 0 0 52837 0 0 61645 0 0 74922 0 0 8867.5 0 0 44629 0 0 59034 0 0 49300 0 0 69387 0 0 48546 0 0 52463 0 0 54140 0 0 61707 0 0 72989 0 0 9776.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 74746000 74746000 0 0 NaN 2679 1444 481 481 1618 1704 1841 2048 1841 2048 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11165 1841 2048 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11165 1841 2048 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11165 Q8IZN3 455 Q8IZN3 Q8IZN3 Probable palmitoyltransferase ZDHHC14 ZDHHC14 sp|Q8IZN3|ZDH14_HUMAN Probable palmitoyltransferase ZDHHC14 OS=Homo sapiens GN=ZDHHC14 PE=1 SV=1 1 70.6753 7.36683E-05 120.66 99.806 120.66 1 S TPDEAPSPPRLLAAGSPLAHSRTMHVLGLAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX LLAAGS(1)PLAHSR LLAAGS(70.68)PLAHS(-70.68)R 6 3 -0.54158 4954.2 0 0 7503.6 0 0 4962.7 0 0 7392.8 0 0 3880.3 0 0 5545.3 0 0 4848.4 0 0 4882.9 0 0 7507.8 0 0 1753.8 0 0 4688 0 0 7087.8 0 0 4985.2 0 0 7567.7 0 0 4017.9 0 0 5635.8 0 0 4961.6 0 0 4976.4 0 0 7295.1 0 0 1764.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16487000 16487000 0 0 NaN 2680 1445 455 455 2425 2563 2757 3079 2757 3079 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14754 2757 3079 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14754 2757 3079 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14754 Q8IZP0 231 Q8IZP0 Q8IZP0 Abl interactor 1 ABI1 sp|Q8IZP0|ABI1_HUMAN Abl interactor 1 OS=Homo sapiens GN=ABI1 PE=1 SV=4 0.993703 21.9814 0.000255929 115.33 71.027 115.33 1 S SPARLGSQHSPGRTASLNQRPRTHSGSSGGS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX T(0.006)AS(0.994)LNQRPR T(-21.98)AS(21.98)LNQRPR 3 3 -0.69693 31518 0 0 12283 0 0 33366 0 0 13133 0 0 17170 0 0 33304 0 0 19096 0 0 21350 0 0 13904 0 0 2683.5 0 0 29831 0 0 11608 0 0 33297 0 0 13756 0 0 18403 0 0 32337 0 0 19203 0 0 21960 0 0 13940 0 0 3021 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 39275000 39275000 0 0 NaN 2681 1446 231 231 4633 4942 5264 5847 5264 5847 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6297 5264 5847 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6297 5264 5847 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6297 Q8IZP0 183 Q8IZP0 Q8IZP0 Abl interactor 1 ABI1 sp|Q8IZP0|ABI1_HUMAN Abl interactor 1 OS=Homo sapiens GN=ABI1 PE=1 SV=4 0.995813 25.9477 3.64313E-05 128.38 95.185 128.38 1 S TGTLSRTNPPTQKPPSPPMSGRGTLGRNTPY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPXXXXXXXXX TNPPT(0.003)QKPPS(0.996)PPMS(0.002)GR T(-43.41)NPPT(-25.95)QKPPS(25.95)PPMS(-27.92)GR 10 3 1.1993 82985 0 0 75002 0 0 84425 0 0 70882 0 0 99142 0 0 85114 0 0 100610 0 0 95940 0 0 74603 0 0 41436 0 0 78531 0 0 70829 0 0 85111 0 0 73260 0 0 99737 0 0 84892 0 0 101630 0 0 97064 0 0 74714 0 0 41238 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 89675000 89675000 0 0 NaN 2682 1446 183 183 4809 5129;5130 5468 6085;6086 5468 6086 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10043 5468 6086 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10043 5468 6086 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10043 Q8IZP0 187 Q8IZP0 Q8IZP0 Abl interactor 1 ABI1 sp|Q8IZP0|ABI1_HUMAN Abl interactor 1 OS=Homo sapiens GN=ABI1 PE=1 SV=4 0.552254 1.0435 0.0488152 53.585 39.33 53.585 1 S SRTNPPTQKPPSPPMSGRGTLGRNTPYKTLE X;X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPXXXXXXXXXXXXX TNPPT(0.013)QKPPS(0.434)PPMS(0.552)GR T(-35.57)NPPT(-16.19)QKPPS(-1.04)PPMS(1.04)GR 14 3 -0.14521 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2683 1446 187 187 4809 5129;5130 5469 6087 5469 6087 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8482 5469 6087 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8482 5469 6087 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8482 Q8IZQ1 2278 Q8IZQ1 Q8IZQ1 WD repeat and FYVE domain-containing protein 3 WDFY3 sp|Q8IZQ1|WDFY3_HUMAN WD repeat and FYVE domain-containing protein 3 OS=Homo sapiens GN=WDFY3 PE=1 SV=2 0.868955 8.21588 0.00247827 97.749 19.067 97.749 1 S EALAPTTQSKLSRVSSGFGLSKLTGSRRNRK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX VS(0.131)S(0.869)GFGLSK VS(-8.22)S(8.22)GFGLS(-54.6)K 3 2 0.34521 22799 0 0 15978 0 0 21402 0 0 16730 0 0 16824 0 0 21165 0 0 16749 0 0 20047 0 0 18086 0 0 9057.1 0 0 21568 0 0 15099 0 0 21574 0 0 17203 0 0 17344 0 0 21020 0 0 17089 0 0 20424 0 0 17789 0 0 8992.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21774000 21774000 0 0 NaN 2684 1447 2278 2278 5272 5618 5989 6654 5989 6654 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17142 5989 6654 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17142 5989 6654 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17142 Q8N122 877 Q8N122 Q8N122 Regulatory-associated protein of mTOR RPTOR sp|Q8N122|RPTOR_HUMAN Regulatory-associated protein of mTOR OS=Homo sapiens GN=RPTOR PE=1 SV=1 0.531342 5.31892 0.000558424 100.04 79.783 100.04 1 S ASPTNKGVHIHQAGGSPPASSTSSSSLTNDV X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPPPPPP GVHIHQAGGS(0.531)PPAS(0.028)S(0.028)T(0.156)S(0.052)S(0.073)S(0.102)S(0.025)LT(0.004)NDVAK GVHIHQAGGS(5.32)PPAS(-12.84)S(-12.84)T(-5.32)S(-10.06)S(-8.62)S(-7.15)S(-13.25)LT(-20.8)NDVAK 10 4 -0.45432 9060.5 0 0 9726.8 0 0 9442.7 0 0 8169.7 0 0 9539.5 0 0 11211 0 0 13005 0 0 11941 0 0 10477 0 0 18016 0 0 8575 0 0 9179.7 0 0 9494 0 0 8532.3 0 0 9721.6 0 0 11145 0 0 13003 0 0 12492 0 0 10445 0 0 17240 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14242000 14242000 0 0 NaN 2685 1450 877 877 1672 1764 1906 2124 1906 2124 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11888 1906 2124 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11888 1906 2124 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11888 Q8N122 863 Q8N122 Q8N122 Regulatory-associated protein of mTOR RPTOR sp|Q8N122|RPTOR_HUMAN Regulatory-associated protein of mTOR OS=Homo sapiens GN=RPTOR PE=1 SV=1 0.991542 21.0045 9.61887E-06 133.65 111.49 133.65 1 S QRVLDTSSLTQSAPASPTNKGVHIHQAGGSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXPPPPPPPPPPPPPPPPPPXXXXXXXXXXX VLDTSSLTQS(0.001)APAS(0.992)PT(0.008)NK VLDT(-67.11)S(-67.76)S(-60.35)LT(-45.47)QS(-32.48)APAS(21)PT(-21)NK 14 3 0.43407 10744 0 0 13896 0 0 11038 0 0 14409 0 0 14912 0 0 11331 0 0 17288 0 0 14274 0 0 17655 0 0 42190 0 0 10168 0 0 13130 0 0 11150 0 0 14714 0 0 14938 0 0 11611 0 0 17494 0 0 15475 0 0 17405 0 0 40058 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 107920000 107920000 0 0 NaN 2686 1450 863 863 5157 5495 5856 6509 5856 6509 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16573 5856 6509 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16573 5856 6509 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16573 Q8N163 808 Q8N163 Q8N163 Cell cycle and apoptosis regulator protein 2 CCAR2 sp|Q8N163|CCAR2_HUMAN Cell cycle and apoptosis regulator protein 2 OS=Homo sapiens GN=CCAR2 PE=1 SV=2 0.999995 53.0264 1.82757E-08 173.36 140.97 173.36 1 S GAAPTEHKALVSHNGSLINVGSLLQRAEQQD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPXXXXX ALVSHNGS(1)LINVGSLLQR ALVS(-53.03)HNGS(53.03)LINVGS(-68.55)LLQR 8 3 1.4693 5645.9 0 0 2801.3 0 0 4207.5 0 0 4015.9 0 0 5207.2 0 0 5537.1 0 0 5030.7 0 0 5581.1 0 0 3380.9 0 0 9885.4 0 0 5337 0 0 2653.2 0 0 4331.3 0 0 4073.8 0 0 5221.2 0 0 5501.4 0 0 5084.1 0 0 5894.4 0 0 3405.9 0 0 9437.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16385000 16385000 0 0 NaN 2687 1451 808 808 331 352 378 419 378 419 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21615 378 419 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21615 378 419 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21615 Q8N163 678 Q8N163 Q8N163 Cell cycle and apoptosis regulator protein 2 CCAR2 sp|Q8N163|CCAR2_HUMAN Cell cycle and apoptosis regulator protein 2 OS=Homo sapiens GN=CCAR2 PE=1 SV=2 0.964564 16.3713 1.45975E-16 241.71 226.62 241.71 1 S FAGAKLEDSEVRSVASNQSEMEFSSLQDMPK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP S(0.022)VAS(0.965)NQS(0.013)EMEFSSLQDMPK S(-16.37)VAS(16.37)NQS(-18.64)EMEFS(-153.91)S(-171.73)LQDMPK 4 3 0.065057 35703 0 0 20371 0 0 32309 0 0 20950 0 0 21776 0 0 32971 0 0 22250 0 0 30076 0 0 21677 0 0 31868 0 0 33771 0 0 19247 0 0 32601 0 0 21668 0 0 22727 0 0 32535 0 0 22610 0 0 31241 0 0 21413 0 0 30703 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 98262000 98262000 0 0 NaN 2688 1451 678 678 4546 4848;4849 5165;5166 5735;5736 5166 5736 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20172 5166 5736 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20172 5166 5736 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20172 Q8N183 134 Q8N183 Q8N183 Mimitin, mitochondrial NDUFAF2 sp|Q8N183|MIMIT_HUMAN Mimitin, mitochondrial OS=Homo sapiens GN=NDUFAF2 PE=1 SV=1 1 76.7232 9.25491E-12 188.37 156.99 188.37 1 S ELLPPPVQTQIKGHASAPYFGKEEPSVAPSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP GHAS(1)APYFGKEEPSVAPSSTGK GHAS(76.72)APY(-97.14)FGKEEPS(-76.72)VAPS(-116.07)S(-123.83)T(-130.04)GK 4 4 0.195 20424 0 0 32353 0 0 21706 0 0 35894 0 0 23983 0 0 23042 0 0 27216 0 0 31259 0 0 40283 0 0 25503 0 0 19331 0 0 30583 0 0 21817 0 0 36432 0 0 24261 0 0 23821 0 0 27907 0 0 31805 0 0 39193 0 0 24738 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 46698000 46698000 0 0 NaN 2689 1452 134 134 1462;1463 1539;1540 1661;1662 1841;1842 1662 1842 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13911 1662 1842 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13911 1662 1842 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13911 Q8N1F7 767 Q8N1F7 Q8N1F7 Nuclear pore complex protein Nup93 NUP93 sp|Q8N1F7|NUP93_HUMAN Nuclear pore complex protein Nup93 OS=Homo sapiens GN=NUP93 PE=1 SV=2 0.99129 21.9067 0.00114669 99.5 78.036 99.5 1 S TMNILFTQFKRLKGTSPSSSSRPQRVIEDRD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPXXXXXX GT(0.006)S(0.991)PS(0.001)SSSRPQR GT(-21.91)S(21.91)PS(-28.32)S(-35.38)S(-35.38)S(-35.38)RPQR 3 2 0.13588 21429 0 0 17403 0 0 19486 0 0 16657 0 0 18257 0 0 21517 0 0 18503 0 0 20328 0 0 19638 0 0 3838 0 0 20270 0 0 16436 0 0 19719 0 0 17226 0 0 18604 0 0 21343 0 0 18854 0 0 20552 0 0 19329 0 0 4037.2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 1 0 0 102770000 102770000 0 0 NaN 2690 1453 767 767 1664;2417 1755;2554 1897;2747 2115;3068 1897 2115 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4740 1897 2115 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4740 1897 2115 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4740 Q8N1F8 772 Q8N1F8 Q8N1F8 Serine/threonine-protein kinase 11-interacting protein STK11IP sp|Q8N1F8|S11IP_HUMAN Serine/threonine-protein kinase 11-interacting protein OS=Homo sapiens GN=STK11IP PE=1 SV=3 0.999907 43.3257 0.00918243 73.498 53.659 73.498 1 S CHPPGHGDHLDRAKNSPPQAPSTRDHGSWSL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX AKNS(1)PPQAPSTR AKNS(43.33)PPQAPS(-43.33)T(-43.33)R 4 3 0.79027 11076 0 0 8134.2 0 0 12149 0 0 9137.9 0 0 10389 0 0 12382 0 0 11026 0 0 10525 0 0 9483 0 0 2408.6 0 0 10485 0 0 7689.8 0 0 12152 0 0 9373.3 0 0 10654 0 0 12247 0 0 11151 0 0 10701 0 0 9422.3 0 0 2511.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22420000 22420000 0 0 NaN 2691 1454 772 772 268 289 310 345 310 345 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6873 310 345 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6873 310 345 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6873 Q8N1F8 493 Q8N1F8 Q8N1F8 Serine/threonine-protein kinase 11-interacting protein STK11IP sp|Q8N1F8|S11IP_HUMAN Serine/threonine-protein kinase 11-interacting protein OS=Homo sapiens GN=STK11IP PE=1 SV=3 1 72.434 0.0278582 72.434 44.035 72.434 1 S PRPSPPQEEARGPQESPQKMSEEVRAEPQEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX GPQES(1)PQK GPQES(72.43)PQK 5 3 -0.11895 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2692 1454 493 493 1557 1641 1774 1972 1774 1972 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7142 1774 1972 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7142 1774 1972 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7142 Q8N1F8 610 Q8N1F8 Q8N1F8 Serine/threonine-protein kinase 11-interacting protein STK11IP sp|Q8N1F8|S11IP_HUMAN Serine/threonine-protein kinase 11-interacting protein OS=Homo sapiens GN=STK11IP PE=1 SV=3 0.993011 24.536 0.000308412 100.7 73.2 100.7 1 S SLEAAEIEPEAQAQRSPRPTGSDLLPGAPIL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.993)PRPT(0.003)GS(0.003)DLLPGAPILSLR S(24.54)PRPT(-24.54)GS(-24.54)DLLPGAPILS(-88.07)LR 1 3 -0.1731 4564.4 0 0 3627.8 0 0 4102.2 0 0 4108.7 0 0 2705.9 0 0 4388.3 0 0 3228 0 0 4586.7 0 0 3939.7 0 0 28586 0 0 4317.4 0 0 3429.8 0 0 4141.1 0 0 4193.9 0 0 2836.5 0 0 4442.4 0 0 3280.3 0 0 5454.5 0 0 3857.1 0 0 27023 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10058000 10058000 0 0 NaN 2693 1454 610 610 4163 4438 4730 5249 4730 5249 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22013 4730 5249 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22013 4730 5249 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22013 Q8N1G0 253 Q8N1G0 Q8N1G0 Zinc finger protein 687 ZNF687 sp|Q8N1G0|ZN687_HUMAN Zinc finger protein 687 OS=Homo sapiens GN=ZNF687 PE=1 SV=1 0.932666 11.4151 1.53684E-07 140.73 124.79 140.73 1 S GSGSSPKATDIPASASPPPVAGVPFFKQSPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPPXXXX ATDIPAS(0.067)AS(0.933)PPPVAGVPFFK AT(-55.48)DIPAS(-11.42)AS(11.42)PPPVAGVPFFK 9 3 1.0582 62345 0 0 70757 0 0 61337 0 0 67775 0 0 42214 0 0 62493 0 0 44079 0 0 64826 0 0 87392 0 0 64371 0 0 58990 0 0 66824 0 0 61590 0 0 69686 0 0 44035 0 0 63026 0 0 45965 0 0 66874 0 0 84393 0 0 62113 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 337070000 337070000 0 0 NaN 2694 1455 253 253 520 553 593 660 593 660 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23431 593 660 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23431 593 660 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23431 Q8N1G0 433 Q8N1G0 Q8N1G0 Zinc finger protein 687 ZNF687 sp|Q8N1G0|ZN687_HUMAN Zinc finger protein 687 OS=Homo sapiens GN=ZNF687 PE=1 SV=1 0.986427 18.6138 6.28813E-07 143.04 121.17 140.03 1 S SVARKAVVLPGGTATSPKMIAKNVLGLVPQA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPXXXXXXXXXXXXX AVVLPGGTAT(0.014)S(0.986)PK AVVLPGGT(-83.81)AT(-18.61)S(18.61)PK 11 3 -0.062096 20798 0 0 24782 0 0 22007 0 0 27857 0 0 21272 0 0 20918 0 0 20533 0 0 24204 0 0 27823 0 0 9190.1 0 0 19685 0 0 23429 0 0 22080 0 0 28304 0 0 21627 0 0 21336 0 0 21136 0 0 24428 0 0 27144 0 0 9213.8 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 75513000 75513000 0 0 NaN 2695 1455 433 433 578;2021 616;2139 657;2305 732;2572 657 732 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15939 2305 2572 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14509 657 732 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15939 Q8N1G0 1057 Q8N1G0 Q8N1G0 Zinc finger protein 687 ZNF687 sp|Q8N1G0|ZN687_HUMAN Zinc finger protein 687 OS=Homo sapiens GN=ZNF687 PE=1 SV=1 1 190.096 4.9724E-11 190.1 164.77 190.1 1 S EKHVQVRHGLQLGAQSPGRGTTLARGSSARA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPXXXXXXXXXXXX HGLQLGAQS(1)PGR HGLQLGAQS(190.1)PGR 9 3 -0.5687 18268 0 0 20221 0 0 18402 0 0 26544 0 0 16874 0 0 21324 0 0 22419 0 0 23014 0 0 24529 0 0 1515.2 0 0 17286 0 0 19138 0 0 18514 0 0 26785 0 0 17294 0 0 21631 0 0 22612 0 0 23065 0 0 24113 0 0 1959.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 76874000 76874000 0 0 NaN 2696 1455 1057 1057 1713 1807 1952 2176 1952 2176 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9679 1952 2176 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9679 1952 2176 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9679 Q8N1G0 183 Q8N1G0 Q8N1G0 Zinc finger protein 687 ZNF687 sp|Q8N1G0|ZN687_HUMAN Zinc finger protein 687 OS=Homo sapiens GN=ZNF687 PE=1 SV=1 0.960797 15.3625 5.47314E-18 231.97 215.01 231.97 1 S PEPGDHSDPLPPSAPSPTREGALTPPPFPSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX TPLDLFAHFGPEPGDHSDPLPPS(0.011)APS(0.961)PT(0.028)R T(-211)PLDLFAHFGPEPGDHS(-80.79)DPLPPS(-19.31)APS(15.36)PT(-15.36)R 26 4 0.452 8024.9 0 0 14153 0 0 11230 0 0 14703 0 0 14693 0 0 7172.5 0 0 13489 0 0 14202 0 0 14043 0 0 44571 0 0 7605.6 0 0 13373 0 0 11164 0 0 14942 0 0 14690 0 0 7697.6 0 0 13803 0 0 15316 0 0 13832 0 0 42298 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 180070000 180070000 0 0 NaN 2697 1455 183 183 4829 5154 5493 6111 5493 6111 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23128 5493 6111 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23128 5493 6111 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23128 Q8N1G1 459 Q8N1G1 Q8N1G1 RNA exonuclease 1 homolog REXO1 sp|Q8N1G1|REXO1_HUMAN RNA exonuclease 1 homolog OS=Homo sapiens GN=REXO1 PE=1 SV=3 0.923873 13.8926 0.0484983 53.278 43.357 53.278 1 S ATSGKGRPDRPARRPSPTSGDSRPAAGRGPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX RPS(0.924)PT(0.038)S(0.038)GDS(0.001)RPAAGR RPS(13.89)PT(-13.89)S(-13.89)GDS(-31.06)RPAAGR 3 3 -2.1631 1401.3 0 0 2020.3 0 0 2145.4 0 0 2280.5 0 0 2331.9 0 0 2408.9 0 0 2485.7 0 0 2473.9 0 0 2116.2 0 0 1630.8 0 0 1328.8 0 0 1910 0 0 2120.1 0 0 2327.7 0 0 2357.3 0 0 2412.7 0 0 2512.7 0 0 2528.1 0 0 2103.8 0 0 1592.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9328600 9328600 0 0 NaN 2698 1456 459 459 3410 3622 3863 4288 3863 4288 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5134 3863 4288 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5134 3863 4288 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5134 Q8N1G1 914 Q8N1G1 Q8N1G1 RNA exonuclease 1 homolog REXO1 sp|Q8N1G1|REXO1_HUMAN RNA exonuclease 1 homolog OS=Homo sapiens GN=REXO1 PE=1 SV=3 0.843168 8.25445 0.0401587 43.991 19.737 43.991 1 S GRLAAKTSFSLSRPSSPRVEDLKGAALYSRL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX T(0.001)S(0.001)FS(0.001)LS(0.029)RPS(0.126)S(0.843)PR T(-31.01)S(-31.01)FS(-29.98)LS(-14.69)RPS(-8.25)S(8.25)PR 10 3 0.73853 12669 0 0 13846 0 0 12457 0 0 13952 0 0 8858.9 0 0 11858 0 0 9558.1 0 0 12146 0 0 13589 0 0 2869.1 0 0 11988 0 0 13080 0 0 12513 0 0 14286 0 0 9216.2 0 0 11988 0 0 9806.1 0 0 12259 0 0 13237 0 0 2982.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22054000 22054000 0 0 NaN 2699 1456 914 914 4912 5237 5580 6202 5580 6202 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12128 5580 6202 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12128 5580 6202 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12128 Q8N1G4 520 Q8N1G4 Q8N1G4 Leucine-rich repeat-containing protein 47 LRRC47 sp|Q8N1G4|LRC47_HUMAN Leucine-rich repeat-containing protein 47 OS=Homo sapiens GN=LRRC47 PE=1 SV=1 0.978111 16.5868 8.79066E-35 303.87 286.96 303.87 1 S EMKKYTLENKEEGSLSDTEADAVSGQLPDPT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPPPPPPPPP YTLENKEEGS(0.021)LS(0.978)DTEADAVSGQLPDPTTNPSAGK Y(-199.15)T(-65.17)LENKEEGS(-16.59)LS(16.59)DT(-33.63)EADAVS(-162.1)GQLPDPT(-238.3)T(-244.03)NPS(-260.29)AGK 12 4 -0.41667 14665 0 0 27983 0 0 18680 0 0 24162 0 0 26633 0 0 19501 0 0 23750 0 0 29229 0 0 29928 0 0 115640 0 0 13892 0 0 26413 0 0 18670 0 0 24967 0 0 26523 0 0 20094 0 0 24483 0 0 32427 0 0 29268 0 0 109570 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 140990000 140990000 0 0 NaN 2700 1457 520 520 924;5449 978;5805 1060;1061;6199 1170;1171;6900 6199 6900 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18486 6199 6900 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18486 6199 6900 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18486 Q8N201 82 Q8N201 Q8N201 Integrator complex subunit 1 INTS1 sp|Q8N201|INT1_HUMAN Integrator complex subunit 1 OS=Homo sapiens GN=INTS1 PE=1 SV=2 0.499379 0 1.29849E-22 258.56 210.75 258.56 S SASALTGLTKRPKLSSTPPLSALGRLAEAAV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX LS(0.001)S(0.499)T(0.499)PPLSALGR LS(-26.04)S(0)T(0)PPLS(-74.13)ALGR 3 2 0.68789 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2701 1458 82 82 2601 2747 2946 3283 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18292 2946 3283 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18292 2946 3283 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18292 Q8N201 1326 Q8N201 Q8N201 Integrator complex subunit 1 INTS1 sp|Q8N201|INT1_HUMAN Integrator complex subunit 1 OS=Homo sapiens GN=INTS1 PE=1 SV=2 0.979726 16.8418 5.96147E-10 179.19 110.7 179.19 1 S SLPPRRDSTEAPKPKSSPEQPIGQGRIRVGT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPXXXXX S(0.98)S(0.02)PEQPIGQGR S(16.84)S(-16.84)PEQPIGQGR 1 2 1.044 17518 0 0 13182 0 0 17343 0 0 11894 0 0 16328 0 0 18303 0 0 16037 0 0 16143 0 0 12831 0 0 3430.9 0 0 16576 0 0 12445 0 0 17460 0 0 12394 0 0 16623 0 0 18039 0 0 16250 0 0 16380 0 0 12797 0 0 3604.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29448000 29448000 0 0 NaN 2702 1458 1326 1326 4377 4663 4967 5512 4967 5512 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7300 4967 5512 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7300 4967 5512 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7300 Q8N2F6 45 Q8N2F6 Q8N2F6 Armadillo repeat-containing protein 10 ARMC10 sp|Q8N2F6|ARM10_HUMAN Armadillo repeat-containing protein 10 OS=Homo sapiens GN=ARMC10 PE=1 SV=1 0.9671 15.0051 2.88518E-41 329.72 301 329.72 1 S GRRRGDRELGIRSSKSAGALEEGTSEGQLCG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP S(0.967)AGALEEGT(0.031)S(0.002)EGQLCGR S(15.01)AGALEEGT(-15.01)S(-26.14)EGQLCGR 1 2 0.22086 21091 0 0 38182 0 0 20029 0 0 38319 0 0 32509 0 0 20250 0 0 31427 0 0 31446 0 0 38880 0 0 12957 0 0 19954 0 0 36070 0 0 20380 0 0 39046 0 0 32245 0 0 21269 0 0 32246 0 0 31499 0 0 38047 0 0 12928 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 53628000 53628000 0 0 NaN 2703 1459 45 45 3581;4361 3804;4645 4057;4949 4512;5494 4057 4512 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12472 4057 4512 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12472 4057 4512 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12472 Q8N2M8 285 Q8N2M8 Q8N2M8 CLK4-associating serine/arginine rich protein CLASRP sp|Q8N2M8|CLASR_HUMAN CLK4-associating serine/arginine rich protein OS=Homo sapiens GN=CLASRP PE=1 SV=4 0.987836 19.1279 0.0200185 66.84 36.111 66.84 1 S QRREFREKRLRGRKISPPSYARRDSPTYDPY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX KIS(0.988)PPS(0.012)YAR KIS(19.13)PPS(-19.13)Y(-40.46)AR 3 2 0.11322 18404 0 0 21501 0 0 17650 0 0 21794 0 0 25850 0 0 18773 0 0 24540 0 0 23366 0 0 22607 0 0 13912 0 0 17412 0 0 20313 0 0 17914 0 0 22311 0 0 25728 0 0 19035 0 0 24989 0 0 23679 0 0 22388 0 0 13640 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20870000 20870000 0 0 NaN 2704 1460 285 285 2099 2220 2391 2665 2391 2665 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12108 2391 2665 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12108 2391 2665 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12108 Q8N3D4 1273 Q8N3D4 Q8N3D4 EH domain-binding protein 1-like protein 1 EHBP1L1 sp|Q8N3D4|EH1L1_HUMAN EH domain-binding protein 1-like protein 1 OS=Homo sapiens GN=EHBP1L1 PE=1 SV=2 0.86021 7.89127 0.000226751 118.28 92.893 118.28 1 S VNGEPGSVPPPRAHGSFSHVRDADLLKKRRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX AHGS(0.86)FS(0.14)HVR AHGS(7.89)FS(-7.89)HVR 4 3 0.41085 11935 0 0 12645 0 0 12327 0 0 13611 0 0 9720.8 0 0 12731 0 0 10664 0 0 12776 0 0 13113 0 0 2821.2 0 0 11295 0 0 11951 0 0 12360 0 0 13903 0 0 10034 0 0 12806 0 0 10877 0 0 12899 0 0 12834 0 0 2952.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19059000 19059000 0 0 NaN 2705 1461 1273 1273 239 254 272 303 272 303 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6093 272 303 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6093 272 303 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6093 Q8N3D4 285 Q8N3D4 Q8N3D4 EH domain-binding protein 1-like protein 1 EHBP1L1 sp|Q8N3D4|EH1L1_HUMAN EH domain-binding protein 1-like protein 1 OS=Homo sapiens GN=EHBP1L1 PE=1 SV=2 0.5 0 3.55254E-12 198.73 178.53 198.73 1 S AGGQVGPEAPRPPETSPEMRSSRQPAQDTAP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ANEAGGQVGPEAPRPPET(0.5)S(0.5)PEMR ANEAGGQVGPEAPRPPET(0)S(0)PEMR 19 3 0.28642 9163.6 0 0 12462 0 0 9936.8 0 0 11535 0 0 10371 0 0 9547.9 0 0 11330 0 0 10484 0 0 12628 0 0 5016.4 0 0 8674 0 0 11767 0 0 9968.5 0 0 11869 0 0 10514 0 0 9680.3 0 0 11523 0 0 10631 0 0 12405 0 0 4966.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27282000 27282000 0 0 NaN 2706 1461 285 285 342 368 397 438 397 438 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11067 397 438 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11067 397 438 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11067 Q8N3D4 1016 Q8N3D4 Q8N3D4 EH domain-binding protein 1-like protein 1 EHBP1L1 sp|Q8N3D4|EH1L1_HUMAN EH domain-binding protein 1-like protein 1 OS=Homo sapiens GN=EHBP1L1 PE=1 SV=2 0.543622 0.759721 0.0187518 58.831 34.742 58.831 1 S EAQVASGAGAGAPRASSPEKAEEDRRLPGSQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPXXXXXX AS(0.544)S(0.456)PEKAEEDR AS(0.76)S(-0.76)PEKAEEDR 2 3 0.10255 11371 0 0 11483 0 0 11167 0 0 12796 0 0 11188 0 0 12664 0 0 9821.8 0 0 12350 0 0 14900 0 0 3336.3 0 0 10759 0 0 10856 0 0 11254 0 0 13056 0 0 11338 0 0 12702 0 0 10202 0 0 12500 0 0 14487 0 0 3427.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6547600 6547600 0 0 NaN 2707 1461 1016 1016 504 535 575 641 575 641 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6475 575 641 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6475 575 641 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6475 Q8N3F8 621 Q8N3F8 Q8N3F8 MICAL-like protein 1 MICALL1 sp|Q8N3F8|MILK1_HUMAN MICAL-like protein 1 OS=Homo sapiens GN=MICALL1 PE=1 SV=2 0.919397 10.7114 6.67787E-16 235.26 192.63 235.26 1 S LLVGDRSPVPSPGSSSPQLQVKSSCKENPFN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPXXXXXXXXX SPVPSPGS(0.003)S(0.078)S(0.919)PQLQVK S(-98.86)PVPS(-42.48)PGS(-25.65)S(-10.71)S(10.71)PQLQVK 10 2 -0.27738 6135.8 0 0 5764.7 0 0 6064.3 0 0 5828.4 0 0 5411 0 0 5707 0 0 5702.1 0 0 5542 0 0 5067.4 0 0 12939 0 0 5805.7 0 0 5446 0 0 6103 0 0 5978.6 0 0 5533.2 0 0 5748.1 0 0 5772.9 0 0 5955.3 0 0 5026.9 0 0 12312 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5136200 5136200 0 0 NaN 2708 1462 621 621 4209 4486 4780 5306 4780 5306 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15223 4780 5306 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15223 4780 5306 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15223 Q8N3U4 1064 Q8N3U4 Q8N3U4 Cohesin subunit SA-2 STAG2 sp|Q8N3U4|STAG2_HUMAN Cohesin subunit SA-2 OS=Homo sapiens GN=STAG2 PE=1 SV=3 0.81319 6.40257 1.05785E-07 143.07 125.37 143.07 1 S LAGGDDDTMSVISGISSRGSTVRSKKSKPST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX NSLLAGGDDDTMSVIS(0.001)GIS(0.813)S(0.186)R NS(-126.27)LLAGGDDDT(-92.36)MS(-64.48)VIS(-31.12)GIS(6.4)S(-6.4)R 19 3 -0.62861 5323.7 0 0 4174.5 0 0 5000 0 0 4732.9 0 0 4775.7 0 0 6290.8 0 0 3486.4 0 0 5677.4 0 0 3957 0 0 22258 0 0 5036.4 0 0 3946.7 0 0 5048.2 0 0 4850.5 0 0 4841.8 0 0 6270.2 0 0 3623.7 0 0 6389.3 0 0 3884.4 0 0 21090 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11830000 11830000 0 0 NaN 2709 1463 1064 1064 2919 3093 3313 3673 3313 3673 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20640 3313 3673 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20640 3313 3673 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20640 Q8N3X1 432 Q8N3X1 Q8N3X1 Formin-binding protein 4 FNBP4 sp|Q8N3X1|FNBP4_HUMAN Formin-binding protein 4 OS=Homo sapiens GN=FNBP4 PE=1 SV=3 0.999808 37.1609 1.97227E-16 246.52 213.95 246.52 1 S ELRALEEGDGSVSGSSPRSDISQPASQDGMR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPXXXXXXXXXXXXX ALEEGDGSVSGSS(1)PR ALEEGDGS(-107.03)VS(-76.83)GS(-37.16)S(37.16)PR 13 2 1.5281 21102 0 0 17533 0 0 22097 0 0 15426 0 0 21373 0 0 20893 0 0 21690 0 0 20286 0 0 18143 0 0 4065.5 0 0 19972 0 0 16551 0 0 22184 0 0 16055 0 0 21734 0 0 20698 0 0 21966 0 0 20494 0 0 18052 0 0 4297.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 31539000 31539000 0 0 NaN 2710 1464 432 432 287 308 329 367 329 367 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9408 329 367 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9408 329 367 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9408 Q8N3X1 18 Q8N3X1 Q8N3X1 Formin-binding protein 4 FNBP4 sp|Q8N3X1|FNBP4_HUMAN Formin-binding protein 4 OS=Homo sapiens GN=FNBP4 PE=1 SV=3 1 153.477 2.81248E-07 153.48 103.27 153.48 1 S KKSRAVPGRRPILQLSPPGPRGSTPGRDPEP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX RPILQLS(1)PPGPR RPILQLS(153.48)PPGPR 7 3 -0.41699 10305 0 0 19144 0 0 11787 0 0 17027 0 0 13721 0 0 11058 0 0 17242 0 0 15907 0 0 18454 0 0 2589.5 0 0 9757.2 0 0 18073 0 0 11814 0 0 17516 0 0 13860 0 0 11416 0 0 17415 0 0 15846 0 0 18157 0 0 2806.5 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 62629000 62629000 0 0 NaN 2711 1464 18 18 3390 3600 3840 4264;4265 3840 4265 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16166 3840 4265 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16166 3840 4265 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16166 Q8N3Z6 482 Q8N3Z6 Q8N3Z6 Zinc finger CCHC domain-containing protein 7 ZCCHC7 sp|Q8N3Z6|ZCHC7_HUMAN Zinc finger CCHC domain-containing protein 7 OS=Homo sapiens GN=ZCCHC7 PE=1 SV=2 0.724053 4.22458 0.000397611 117.25 74.913 117.25 1 S REVDEDFPRGPKTYSSPGSFKTQKPSKPFHR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX T(0.001)YS(0.274)S(0.724)PGS(0.002)FK T(-31.43)Y(-69.4)S(-4.22)S(4.22)PGS(-26.29)FK 4 2 2.3833 38922 0 0 41373 0 0 37900 0 0 36203 0 0 22980 0 0 39679 0 0 24638 0 0 35379 0 0 38065 0 0 15902 0 0 36826 0 0 39054 0 0 38042 0 0 37544 0 0 24238 0 0 39593 0 0 25368 0 0 36133 0 0 36989 0 0 15792 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19454000 19454000 0 0 NaN 2712 1465 482 482 5035 5369 5721 6360 5721 6360 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14007 5721 6360 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14007 5721 6360 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14007 Q8N456 135 Q8N456 Q8N456 Leucine-rich repeat-containing protein 18 LRRC18 sp|Q8N456|LRC18_HUMAN Leucine-rich repeat-containing protein 18 OS=Homo sapiens GN=LRRC18 PE=2 SV=2 0.666667 0 0.0410164 48.848 22.7 48.848 2 S LKNIRAVNLGLNHLDSVPTTLGALKELHEVG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPXXXXXX AVNLGLNHLDS(0.667)VPT(0.667)T(0.667)LGALK AVNLGLNHLDS(0)VPT(0)T(0)LGALK 11 4 -1.2656 0 5237.6 0 0 5965.7 0 0 5823.9 0 0 5727.4 0 0 4998.5 0 0 4860.4 0 0 4991.8 0 0 4778.9 0 0 6453.8 0 0 5417.8 0 0 4958.3 0 0 5634.3 0 0 5820.5 0 0 5881.3 0 0 5122.5 0 0 4919.7 0 0 5121.5 0 0 4960 0 0 6306 0 0 5212.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 14925000 0 14925000 0 NaN 2713 1466 135 135 558 595 636 710 636 710 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20770 636 710 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20770 636 710 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20770 Q8N488 99 Q8N488 Q8N488 RING1 and YY1-binding protein RYBP sp|Q8N488|RYBP_HUMAN RING1 and YY1-binding protein OS=Homo sapiens GN=RYBP PE=1 SV=2 0.660498 4.54484 0.0397255 42.314 21.933 42.314 1 S VEKQDKEKPEKDKEISPSVTKKNTNKKTKPK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX DKEIS(0.66)PS(0.232)VT(0.108)K DKEIS(4.54)PS(-4.54)VT(-7.88)K 5 3 -0.27879 13613 0 0 15295 0 0 14563 0 0 14893 0 0 11349 0 0 15855 0 0 13262 0 0 15304 0 0 14563 0 0 3894.7 0 0 12885 0 0 14447 0 0 14574 0 0 15332 0 0 11735 0 0 15849 0 0 13444 0 0 15489 0 0 14314 0 0 4021.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11196000 11196000 0 0 NaN 2714 1467 99 99 715 759 810 896 810 896 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11889 810 896 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11889 810 896 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11889 Q8N4S0 131 Q8N4S0 Q8N4S0 Coiled-coil domain-containing protein 82 CCDC82 sp|Q8N4S0|CCD82_HUMAN Coiled-coil domain-containing protein 82 OS=Homo sapiens GN=CCDC82 PE=1 SV=2 1 153.138 5.17073E-07 153.14 124.51 153.14 1 S IKHRNIDLQDQEKHLSQEDNDLNKQTGQIIE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX HLS(1)QEDNDLNK HLS(153.14)QEDNDLNK 3 3 -0.11882 21616 0 0 24759 0 0 20467 0 0 22142 0 0 23588 0 0 22747 0 0 26768 0 0 21720 0 0 24280 0 0 5671.1 0 0 20450 0 0 23374 0 0 20719 0 0 22904 0 0 23795 0 0 22771 0 0 27026 0 0 21997 0 0 24063 0 0 5842.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29690000 29690000 0 0 NaN 2715 1468 131 131 1729 1823 1968 2194 1968 2194 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10699 1968 2194 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10699 1968 2194 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10699 Q8N4V1 128 Q8N4V1 Q8N4V1 Membrane magnesium transporter 1 MMGT1 sp|Q8N4V1|MMGT1_HUMAN Membrane magnesium transporter 1 OS=Homo sapiens GN=MMGT1 PE=1 SV=1 1 69.7206 0.0200115 69.721 6.0964 69.721 1 S DALSSNTSLKLRKLESLRR____________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX KLES(1)LRR KLES(69.72)LRR 4 3 0.14069 19786 0 0 27730 0 0 20844 0 0 25602 0 0 13980 0 0 18311 0 0 14768 0 0 18450 0 0 30005 0 0 2380 0 0 18727 0 0 26183 0 0 20845 0 0 26300 0 0 14618 0 0 18686 0 0 15412 0 0 18573 0 0 28960 0 0 2668 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 58583000 58583000 0 0 NaN 2716 1469 128 128 2112 2233 2406 2682 2406 2682 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9295 2406 2682 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9295 2406 2682 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9295 Q8N573 202 Q8N573 Q8N573 Oxidation resistance protein 1 OXR1 sp|Q8N573|OXR1_HUMAN Oxidation resistance protein 1 OS=Homo sapiens GN=OXR1 PE=1 SV=2 0.48469 0 1.9578E-07 166.96 63.02 166.96 S PSSTFTGIRPARVVSSTSEEEEAFTEKFLKI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPXXXX VVS(0.017)S(0.485)T(0.485)S(0.014)EEEEAFTEK VVS(-14.63)S(0)T(0)S(-15.41)EEEEAFT(-157.03)EK 4 3 2.1567 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2717 1470 202 202 5312 5660 6036 6708 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16788 6036 6708 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16788 6036 6708 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16788 Q8N5C7 2 Q8N5C7 Q8N5C7 DTW domain-containing protein 1 DTWD1 sp|Q8N5C7|DTWD1_HUMAN DTW domain-containing protein 1 OS=Homo sapiens GN=DTWD1 PE=1 SV=1 1 57.2809 0.00204118 57.281 38.476 57.281 1 S ______________MSLNPPIFLKRSEENSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(1)LNPPIFLK S(57.28)LNPPIFLK 1 2 -0.27972 6848.1 0 0 4932 0 0 7606.8 0 0 6114.9 0 0 18519 0 0 7067.5 0 0 16613 0 0 10220 0 0 4711.1 0 0 20702 0 0 6482.9 0 0 4665.8 0 0 7746 0 0 6221.7 0 0 18111 0 0 7120.1 0 0 16676 0 0 10753 0 0 5153.2 0 0 19730 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26419000 26419000 0 0 NaN 2718 1471 2 2 3956 4215 4498 5000 4498 5000 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24023 4498 5000 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24023 4498 5000 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24023 Q8N5F7 9 Q8N5F7 Q8N5F7 NF-kappa-B-activating protein NKAP sp|Q8N5F7|NKAP_HUMAN NF-kappa-B-activating protein OS=Homo sapiens GN=NKAP PE=1 SV=1 0.843976 10.4473 0.0515155 52.359 16.247 52.359 1 S _______MAPVSGSRSPDREASGSGGRRRSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPXXXX APVS(0.076)GS(0.076)RS(0.844)PDREAS(0.002)GS(0.002)GGR APVS(-10.45)GS(-10.45)RS(10.45)PDREAS(-26.54)GS(-26.54)GGR 8 3 -0.1112 1324.8 0 0 3886.8 0 0 2130.3 0 0 3600.7 0 0 2452 0 0 1619.1 0 0 2423.2 0 0 2568.9 0 0 4012.9 0 0 1492.9 0 0 1256.6 0 0 3670.1 0 0 2102.6 0 0 3682.7 0 0 2470.4 0 0 1726.1 0 0 2511.5 0 0 2585 0 0 3892.1 0 0 1465.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6043100 6043100 0 0 NaN 2719 1472 9 9 386 413 448 497 448 497 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5513 448 497 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5513 448 497 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5513 Q8N5F7 149 Q8N5F7 Q8N5F7 NF-kappa-B-activating protein NKAP sp|Q8N5F7|NKAP_HUMAN NF-kappa-B-activating protein OS=Homo sapiens GN=NKAP PE=1 SV=1 1 148.153 6.02006E-07 148.15 126.1 148.15 1 S RERIGELGAPEVWGLSPKNPEPDSDEHTPVE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPXXXXXXXXXXXXX IGELGAPEVWGLS(1)PK IGELGAPEVWGLS(148.15)PK 13 3 -0.26571 52859 0 0 69485 0 0 47142 0 0 72388 0 0 40517 0 0 46222 0 0 51467 0 0 53909 0 0 65735 0 0 29947 0 0 49997 0 0 65656 0 0 47738 0 0 73728 0 0 41676 0 0 47652 0 0 52254 0 0 54679 0 0 64255 0 0 29446 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 272720000 272720000 0 0 NaN 2720 1472 149 149 1838 1941 2097 2351 2097 2351 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23569 2097 2351 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23569 2097 2351 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23569 Q8N5G2 332 Q8N5G2 Q8N5G2 Macoilin TMEM57 sp|Q8N5G2|MACOI_HUMAN Macoilin OS=Homo sapiens GN=TMEM57 PE=1 SV=1 0.996378 24.395 7.0205E-07 157.43 118.56 157.43 1 S ASSKNYKNASGVVNSSPRSHSATNGSIPSSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX NASGVVNS(0.004)S(0.996)PR NAS(-101.35)GVVNS(-24.39)S(24.39)PR 9 2 -0.42828 13211 0 0 12955 0 0 12304 0 0 12769 0 0 22436 0 0 11850 0 0 21356 0 0 16248 0 0 11613 0 0 3479.6 0 0 12497 0 0 12237 0 0 12563 0 0 13108 0 0 22145 0 0 11981 0 0 21523 0 0 16233 0 0 11872 0 0 3652.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20501000 20501000 0 0 NaN 2721 1473 332 332 2779 2948 3158 3508 3158 3508 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6905 3158 3508 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6905 3158 3508 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6905 Q8N5I9 178 Q8N5I9 Q8N5I9 Uncharacterized protein C12orf45 C12orf45 sp|Q8N5I9|CL045_HUMAN Uncharacterized protein C12orf45 OS=Homo sapiens GN=C12orf45 PE=1 SV=2 0.999252 31.2604 0.0187276 59.372 36.455 59.372 1 S LPNSEGGKGKIEVLDSPASKKKK________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX GKIEVLDS(0.999)PAS(0.001)K GKIEVLDS(31.26)PAS(-31.26)K 8 3 -0.4329 13857 0 0 9355.7 0 0 13507 0 0 10855 0 0 7312.1 0 0 13831 0 0 7948.2 0 0 10108 0 0 11182 0 0 8131.5 0 0 13111 0 0 8846.5 0 0 13547 0 0 11102 0 0 7798.2 0 0 13700 0 0 8148.6 0 0 10528 0 0 10896 0 0 7890.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12976000 12976000 0 0 NaN 2722 1474 178 178 1488 1566 1691 1872 1691 1872 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15218 1691 1872 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15218 1691 1872 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15218 Q8N5P1 59 Q8N5P1 Q8N5P1 Zinc finger CCCH domain-containing protein 8 ZC3H8 sp|Q8N5P1|ZC3H8_HUMAN Zinc finger CCCH domain-containing protein 8 OS=Homo sapiens GN=ZC3H8 PE=1 SV=2 0.999914 40.6754 0.0167891 76.619 48.606 76.619 1 S LECEQIPKKFRHSAISPKSSLHRKSRSKDYD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX HSAIS(1)PK HS(-40.68)AIS(40.68)PK 5 2 -0.65509 34896 0 0 56512 0 0 33455 0 0 53828 0 0 44034 0 0 35805 0 0 43526 0 0 46146 0 0 60539 0 0 7334.8 0 0 33016 0 0 53370 0 0 33899 0 0 55143 0 0 44070 0 0 36837 0 0 44796 0 0 46108 0 0 59013 0 0 7974.5 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 22137000 22137000 0 0 NaN 2723 1475 59 59 1746 1842 1988 2215;2216 1988 2216 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8007 1988 2216 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8007 1988 2216 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8007 Q8N5P1 165 Q8N5P1 Q8N5P1 Zinc finger CCCH domain-containing protein 8 ZC3H8 sp|Q8N5P1|ZC3H8_HUMAN Zinc finger CCCH domain-containing protein 8 OS=Homo sapiens GN=ZC3H8 PE=1 SV=2 0.851195 7.57413 0.0232579 56.121 42.717 56.121 1 S GPGNKGSNALLRNSGSQEEDGKPKEKQQHLS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX NS(0.149)GS(0.851)QEEDGKPK NS(-7.57)GS(7.57)QEEDGKPK 4 3 -0.24157 6930.1 0 0 9382.1 0 0 7664 0 0 9696.9 0 0 13892 0 0 8002.9 0 0 13835 0 0 10021 0 0 10085 0 0 3593.4 0 0 6560.4 0 0 8864.7 0 0 7751.2 0 0 9910 0 0 13726 0 0 8129.4 0 0 13983 0 0 10082 0 0 10110 0 0 3615.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24627000 24627000 0 0 NaN 2724 1475 165 165 2914 3088 3308 3668 3308 3668 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7401 3308 3668 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7401 3308 3668 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7401 Q8N5Y2 400 Q8N5Y2 Q8N5Y2 Male-specific lethal 3 homolog MSL3 sp|Q8N5Y2|MS3L1_HUMAN Male-specific lethal 3 homolog OS=Homo sapiens GN=MSL3 PE=1 SV=1 0.888437 12.0358 0.0171772 69.261 39.007 69.261 1 S FLHLEKKTPVHSRSSSPIPLTPSKEGSAVFA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX S(0.056)S(0.056)S(0.888)PIPLTPSK S(-12.04)S(-12.04)S(12.04)PIPLT(-34.06)PS(-46.52)K 3 2 -0.18637 18046 0 0 18494 0 0 19096 0 0 20393 0 0 19528 0 0 18666 0 0 18811 0 0 19951 0 0 21370 0 0 23653 0 0 17080 0 0 17481 0 0 19172 0 0 20795 0 0 19784 0 0 18848 0 0 19252 0 0 20675 0 0 20977 0 0 22733 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 34190000 34190000 0 0 NaN 2725 1476 400 400 4441 4732 5037 5587 5037 5587 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14936 5037 5587 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14936 5037 5587 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14936 Q8N655 295 Q8N655 Q8N655 Uncharacterized protein C10orf12 C10orf12 sp|Q8N655|CJ012_HUMAN Uncharacterized protein C10orf12 OS=Homo sapiens GN=C10orf12 PE=1 SV=1 0.862592 9.13489 0.00593322 82.55 44.464 82.55 1 S EPEVCPTKIKPNLSSSPRSEETTASSLVWPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX IKPNLS(0.032)S(0.105)S(0.863)PR IKPNLS(-14.29)S(-9.13)S(9.13)PR 8 3 -0.2937 20716 0 0 17432 0 0 21370 0 0 17469 0 0 16581 0 0 18938 0 0 18818 0 0 17908 0 0 18220 0 0 2174.4 0 0 19605 0 0 16468 0 0 21426 0 0 17958 0 0 17141 0 0 18908 0 0 19031 0 0 18068 0 0 18003 0 0 2461.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 94430000 94430000 0 0 NaN 2726 1477 295 295 1868 1972 2130 2387 2130 2387 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11712 2130 2387 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11712 2130 2387 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11712 Q8N684 60 Q8N684 Q8N684 Cleavage and polyadenylation specificity factor subunit 7 CPSF7 sp|Q8N684|CPSF7_HUMAN Cleavage and polyadenylation specificity factor subunit 7 OS=Homo sapiens GN=CPSF7 PE=1 SV=1 1 99.0107 0.000971529 99.011 76.405 99.011 1 S RSSSTEPPPPVRQEPSPKPNNKTPAILYTYS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX QEPS(1)PKPNNK QEPS(99.01)PKPNNK 4 3 -0.81901 15912 0 0 29585 0 0 16422 0 0 27736 0 0 13713 0 0 16474 0 0 13384 0 0 20379 0 0 30062 0 0 5083.3 0 0 15059 0 0 27937 0 0 16473 0 0 28410 0 0 14087 0 0 17074 0 0 14097 0 0 20444 0 0 28955 0 0 5258.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 38792000 38792000 0 0 NaN 2727 1478 60 60 3020 3201 3424 3797 3424 3797 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7453 3424 3797 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7453 3424 3797 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7453 Q8N6H7 432 Q8N6H7 Q8N6H7 ADP-ribosylation factor GTPase-activating protein 2 ARFGAP2 sp|Q8N6H7|ARFG2_HUMAN ADP-ribosylation factor GTPase-activating protein 2 OS=Homo sapiens GN=ARFGAP2 PE=1 SV=1 0.778429 5.45705 1.88257E-06 158.56 123.21 158.56 1 S ESSEARQKFAGAKAISSDMFFGREVDAEYEA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX AIS(0.778)S(0.222)DMFFGR AIS(5.46)S(-5.46)DMFFGR 3 2 -0.48312 14644 0 0 17324 0 0 17512 0 0 16485 0 0 11381 0 0 17423 0 0 12893 0 0 15642 0 0 18943 0 0 17699 0 0 13868 0 0 16361 0 0 17396 0 0 16992 0 0 11939 0 0 17433 0 0 13217 0 0 16292 0 0 18434 0 0 17028 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 77244000 77244000 0 0 NaN 2728 1479 432 432 259 278;279 300 334 300 334 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20999 300 334 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20999 300 334 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20999 Q8N6H7 433 Q8N6H7 Q8N6H7 ADP-ribosylation factor GTPase-activating protein 2 ARFGAP2 sp|Q8N6H7|ARFG2_HUMAN ADP-ribosylation factor GTPase-activating protein 2 OS=Homo sapiens GN=ARFGAP2 PE=1 SV=1 0.716665 4.03015 0.000306872 109.39 27.466 109.39 1 S SSEARQKFAGAKAISSDMFFGREVDAEYEAR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX AIS(0.283)S(0.717)DMFFGR AIS(-4.03)S(4.03)DMFFGR 4 2 -0.2891 10321 0 0 13840 0 0 13331 0 0 13069 0 0 8850.6 0 0 11420 0 0 8277.7 0 0 11992 0 0 12941 0 0 10860 0 0 9777.2 0 0 13070 0 0 13195 0 0 13440 0 0 9242.5 0 0 11548 0 0 8581.2 0 0 12333 0 0 12571 0 0 10503 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13786000 13786000 0 0 NaN 2729 1479 433 433 259 278;279 299 333 299 333 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17846 299 333 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17846 299 333 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17846 Q8N6T3 345 Q8N6T3 Q8N6T3 ADP-ribosylation factor GTPase-activating protein 1 ARFGAP1 sp|Q8N6T3|ARFG1_HUMAN ADP-ribosylation factor GTPase-activating protein 1 OS=Homo sapiens GN=ARFGAP1 PE=1 SV=2 0.769342 8.27195 1.18629E-08 146.76 124.19 146.76 1 S ETFGSAEPTKTRKSPSSDSWTCADTSTERRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPXX KS(0.115)PS(0.769)S(0.113)DS(0.003)WTCADTSTER KS(-8.27)PS(8.27)S(-8.32)DS(-24.41)WT(-56.66)CADT(-98.27)S(-104.2)T(-102.66)ER 4 3 -2.5036 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2730 1481 345 345 2222 2348 2529 2824 2529 2824 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11079 2529 2824 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11079 2529 2824 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11079 Q8N6T7 338 Q8N6T7 Q8N6T7 NAD-dependent protein deacetylase sirtuin-6 SIRT6 sp|Q8N6T7|SIR6_HUMAN NAD-dependent protein deacetylase sirtuin-6 OS=Homo sapiens GN=SIRT6 PE=1 SV=2 0.5 0 0.0354308 53.782 31.307 53.782 1 S HNGSEPASPKRERPTSPAPHRPPKRVKAKAV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ERPT(0.5)S(0.5)PAPHRPPK ERPT(0)S(0)PAPHRPPK 5 4 -1.1884 10809 0 0 8164.7 0 0 12215 0 0 10006 0 0 6820.1 0 0 10395 0 0 8294.5 0 0 10359 0 0 8696.4 0 0 3477.4 0 0 10234 0 0 7723.4 0 0 12156 0 0 10168 0 0 7260.8 0 0 10408 0 0 8383.3 0 0 10497 0 0 8563.7 0 0 3514.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11152000 11152000 0 0 NaN 2731 1482 338 338 1125 1184 1274 1401 1274 1401 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5848 1274 1401 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5848 1274 1401 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5848 Q8N7B6 47 Q8N7B6 Q8N7B6 PACRG-like protein PACRGL sp|Q8N7B6|PACRL_HUMAN PACRG-like protein OS=Homo sapiens GN=PACRGL PE=1 SV=2 0.693078 3.7554 2.32437E-07 163.11 120.43 163.11 1 S HRNAVQGSKSSLSTSSPESARKLHPRPSDKL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX SSLS(0.001)T(0.014)S(0.292)S(0.693)PESAR S(-65.37)S(-65.37)LS(-27.39)T(-17.04)S(-3.76)S(3.76)PES(-41.42)AR 7 2 0.56625 12541 0 0 11454 0 0 10247 0 0 11132 0 0 8854.9 0 0 12251 0 0 7232.2 0 0 11024 0 0 12878 0 0 4648.1 0 0 11858 0 0 10819 0 0 10430 0 0 11468 0 0 9050.5 0 0 12223 0 0 7594.3 0 0 11245 0 0 12467 0 0 4631.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6415000 6415000 0 0 NaN 2732 1483 47 47 4369 4654 4958 5503 4958 5503 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7616 4958 5503 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7616 4958 5503 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7616 Q8N7R7 344 Q8N7R7 Q8N7R7 Cyclin-Y-like protein 1 CCNYL1 sp|Q8N7R7|CCYL1_HUMAN Cyclin-Y-like protein 1 OS=Homo sapiens GN=CCNYL1 PE=1 SV=2 0.984528 18.0367 1.22465E-10 179.08 148.08 179.08 1 S CEDKDLCRAAMRRSFSADNFIGIQRSKAILS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX S(0.015)FS(0.985)ADNFIGIQR S(-18.04)FS(18.04)ADNFIGIQR 3 2 -0.31454 23524 0 0 15853 0 0 24630 0 0 14438 0 0 13254 0 0 23786 0 0 13899 0 0 16313 0 0 15726 0 0 22513 0 0 22264 0 0 14967 0 0 24599 0 0 15061 0 0 14132 0 0 23373 0 0 14167 0 0 17331 0 0 15439 0 0 21576 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15945000 15945000 0 0 NaN 2733 1484 344 344 3754 3994 4258 4733 4258 4733 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20146 4258 4733 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20146 4258 4733 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20146 Q8N806 265 Q8N806 Q8N806 Putative E3 ubiquitin-protein ligase UBR7 UBR7 sp|Q8N806|UBR7_HUMAN Putative E3 ubiquitin-protein ligase UBR7 OS=Homo sapiens GN=UBR7 PE=1 SV=2 0.987748 19.3051 2.86813E-17 239.25 219.35 239.25 1 S EVKVEQNSEPCAGSSSESDLQTVFKNESLNA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPPXXXXXX VEQNSEPCAGSS(0.012)S(0.988)ES(0.001)DLQTVFK VEQNS(-163.74)EPCAGS(-41.06)S(-19.31)S(19.31)ES(-32.29)DLQT(-97.03)VFK 13 3 0.18746 9159.8 0 0 6730 0 0 9971.8 0 0 8384.1 0 0 13054 0 0 8637.8 0 0 13547 0 0 11978 0 0 6416.6 0 0 16111 0 0 8670.5 0 0 6367 0 0 10033 0 0 8511.7 0 0 13065 0 0 8719 0 0 13571 0 0 12371 0 0 6633.7 0 0 15448 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 41400000 41400000 0 0 NaN 2734 1485 265 265 5100 5437 5790 6435 5790 6435 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18464 5790 6435 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18464 5790 6435 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18464 Q8N8A6 83 Q8N8A6 Q8N8A6 ATP-dependent RNA helicase DDX51 DDX51 sp|Q8N8A6|DDX51_HUMAN ATP-dependent RNA helicase DDX51 OS=Homo sapiens GN=DDX51 PE=1 SV=3 1 220.635 1.42049E-15 220.64 195.51 220.64 1 S RRPRRRRRVNDAEPGSPEAPQGKRRKADGED X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPXXXXXXXX VNDAEPGS(1)PEAPQGK VNDAEPGS(220.64)PEAPQGK 8 2 0.69292 25446 0 0 25277 0 0 25573 0 0 23743 0 0 38262 0 0 27095 0 0 46056 0 0 30242 0 0 27896 0 0 8182.4 0 0 24079 0 0 23870 0 0 25913 0 0 24526 0 0 38172 0 0 27064 0 0 46009 0 0 30459 0 0 28295 0 0 8404.6 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 52219000 52219000 0 0 NaN 2735 1486 83 83 3546;5187 3764;5529 4010;5892 4451;6548 5892 6548 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10236 5892 6548 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10236 5892 6548 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10236 Q8N9B5 713 Q8N9B5 Q8N9B5 Junction-mediating and -regulatory protein JMY sp|Q8N9B5|JMY_HUMAN Junction-mediating and -regulatory protein OS=Homo sapiens GN=JMY PE=1 SV=2 1 83.8443 2.81942E-24 251.13 235.71 251.13 1 S STRLRLAHARRKGAASPVLQEDHCDSLPSVL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP GAAS(1)PVLQEDHCDSLPSVLQVEEK GAAS(83.84)PVLQEDHCDS(-83.84)LPS(-152.5)VLQVEEK 4 3 1.0266 5579.3 0 0 4721 0 0 5786.8 0 0 4838.6 0 0 3383.2 0 0 7459.7 0 0 3854.5 0 0 6810.4 0 0 3929.1 0 0 24349 0 0 5280.2 0 0 4460.4 0 0 5786.5 0 0 5003.1 0 0 3581.9 0 0 7397.9 0 0 3903 0 0 7590.2 0 0 3873.6 0 0 23085 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9417400 9417400 0 0 NaN 2736 1487 713 713 1351 1425 1533 1696 1533 1696 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19804 1533 1696 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19804 1533 1696 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19804 Q8N9M1 124 Q8N9M1 Q8N9M1 Uncharacterized protein C19orf47 C19orf47 sp|Q8N9M1|CS047_HUMAN Uncharacterized protein C19orf47 OS=Homo sapiens GN=C19orf47 PE=1 SV=1 0.987318 21.9328 0.00291624 93.583 74.508 93.583 1 S HRQDMCKAATESVPCSPSPLAGEIRRGTSAA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPXXXXXX AATES(0.006)VPCS(0.987)PS(0.006)PLAGEIR AAT(-36.82)ES(-22.06)VPCS(21.93)PS(-21.93)PLAGEIR 9 3 -0.1917 6856.3 0 0 7033.8 0 0 8143.3 0 0 7084.5 0 0 5983.7 0 0 7416.2 0 0 5677.2 0 0 6829 0 0 7501.8 0 0 10061 0 0 6492.6 0 0 6644.9 0 0 8098.8 0 0 7276.4 0 0 6197.2 0 0 7430.4 0 0 5843.6 0 0 7175.9 0 0 7324.7 0 0 9631.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15013000 15013000 0 0 NaN 2737 1489 124 124 82 87 95 108 95 108 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15870 95 108 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15870 95 108 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15870 Q8N9T8 171 Q8N9T8 Q8N9T8 Protein KRI1 homolog KRI1 sp|Q8N9T8|KRI1_HUMAN Protein KRI1 homolog OS=Homo sapiens GN=KRI1 PE=1 SV=3 1 176.466 5.61604E-17 228.29 205.41 228.29 1 S EQKQLKESFRAFVEDSEDEDGAGEGGSSLLQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP AFVEDS(1)EDEDGAGEGGSSLLQK AFVEDS(176.47)EDEDGAGEGGS(-176.47)S(-183.9)LLQK 6 3 1.3993 9399.8 0 0 7912.8 0 0 9674 0 0 8579.7 0 0 9046.8 0 0 10746 0 0 9107.1 0 0 9623.7 0 0 9791 0 0 49080 0 0 8895.6 0 0 7478.8 0 0 9717.8 0 0 8803.5 0 0 9219.2 0 0 10753 0 0 9286.1 0 0 11176 0 0 9631.8 0 0 46437 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 18133000 18133000 0 0 NaN 2738 1490 171 171 183 191 205;206 230;231 205 230 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19277 205 230 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19277 205 230 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19277 Q8NAP3 130 Q8NAP3 Q8NAP3 Zinc finger and BTB domain-containing protein 38 ZBTB38 sp|Q8NAP3|ZBT38_HUMAN Zinc finger and BTB domain-containing protein 38 OS=Homo sapiens GN=ZBTB38 PE=1 SV=2 0.968959 14.9438 3.73694E-07 153.1 132.66 153.1 1 S GISFLEDLTDRNFSNSPGPYVFCITEKGVVK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPXXXX NFS(0.031)NS(0.969)PGPYVFCITEK NFS(-14.94)NS(14.94)PGPY(-74.15)VFCIT(-125.6)EK 5 3 0.65012 3998.4 0 0 11179 0 0 5234.7 0 0 10984 0 0 4022.6 0 0 4816.4 0 0 6141.2 0 0 7073.9 0 0 12727 0 0 15835 0 0 3788.1 0 0 10559 0 0 5189.1 0 0 11190 0 0 4189.9 0 0 5161.1 0 0 6329.8 0 0 7485.2 0 0 12278 0 0 15074 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10713000 10713000 0 0 NaN 2739 1491 130 130 2809 2979 3192 3544 3192 3544 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22319 3192 3544 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22319 3192 3544 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22319 Q8NBN3 540 Q8NBN3 Q8NBN3 Transmembrane protein 87A TMEM87A sp|Q8NBN3|TM87A_HUMAN Transmembrane protein 87A OS=Homo sapiens GN=TMEM87A PE=1 SV=3 1 103.346 6.9733E-12 177.91 165.27 177.91 1 S VPSSVTDVALPALLDSDEERMITHFERSKME X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX WVEENVPSSVTDVALPALLDS(1)DEER WVEENVPS(-109.01)S(-103.35)VT(-114.5)DVALPALLDS(103.35)DEER 21 3 -0.13228 7668 0 0 5444.4 0 0 11917 0 0 6489.3 0 0 9961.6 0 0 6426.8 0 0 13270 0 0 10406 0 0 10150 0 0 164410 0 0 7271.8 0 0 5149.1 0 0 11738 0 0 6598.2 0 0 10268 0 0 6804.2 0 0 13264 0 0 15238 0 0 10147 0 0 155050 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 112280000 112280000 0 0 NaN 2740 1492 540 540 5353 5702 6080 6758 6080 6758 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23734 6080 6758 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23734 6080 6758 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23734 Q8NC51 234 Q8NC51 Q8NC51 Plasminogen activator inhibitor 1 RNA-binding protein SERBP1 sp|Q8NC51|PAIRB_HUMAN Plasminogen activator inhibitor 1 RNA-binding protein OS=Homo sapiens GN=SERBP1 PE=1 SV=2 0.999021 30.089 0.000124719 136.49 87.07 136.49 1 S SGSHNWGTVKDELTESPKYIQKQISYNYSDL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX DELT(0.001)ES(0.999)PK DELT(-30.09)ES(30.09)PK 6 2 0.76145 31218 0 0 41191 0 0 28311 0 0 42229 0 0 22087 0 0 31746 0 0 20609 0 0 32225 0 0 45945 0 0 17420 0 0 29530 0 0 38918 0 0 28596 0 0 43128 0 0 22785 0 0 32328 0 0 21743 0 0 32831 0 0 44259 0 0 17149 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 31722000 31722000 0 0 NaN 2741 1493 234 234 662;663 706;707 753;754 833;834 753 833 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11105 753 833 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11105 753 833 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11105 Q8NC56 499 Q8NC56 Q8NC56 LEM domain-containing protein 2 LEMD2 sp|Q8NC56|LEMD2_HUMAN LEM domain-containing protein 2 OS=Homo sapiens GN=LEMD2 PE=1 SV=1 0.81875 6.85159 0.000246504 101.05 82.719 101.05 1 S GEDMLVWRWTKPSSFSDSER___________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX WTKPS(0.001)S(0.012)FS(0.819)DS(0.169)ER WT(-57.46)KPS(-31.72)S(-18.47)FS(6.85)DS(-6.85)ER 8 3 0.71778 20240 0 0 28535 0 0 20466 0 0 26736 0 0 15323 0 0 22006 0 0 19006 0 0 21356 0 0 28345 0 0 4985.2 0 0 19153 0 0 26945 0 0 20539 0 0 27486 0 0 15914 0 0 22270 0 0 19426 0 0 21597 0 0 27572 0 0 5188.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 69177000 69177000 0 0 NaN 2742 1494 499 499 5352 5701 6079 6757 6079 6757 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14640 6079 6757 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14640 6079 6757 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14640 Q8NCD3 473 Q8NCD3 Q8NCD3 Holliday junction recognition protein HJURP sp|Q8NCD3|HJURP_HUMAN Holliday junction recognition protein OS=Homo sapiens GN=HJURP PE=1 SV=2 0.999995 52.7227 6.99862E-07 156.64 119.66 156.64 1 S LPDSWAMNMYRGGPASPGGLQGLETRRLSLP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X XXXXXXXXXXXPPPPPPPPPPPPPPPXXXXX GGPAS(1)PGGLQGLETR GGPAS(52.72)PGGLQGLET(-52.72)R 5 2 1.168 17130 0 0 20790 0 0 18618 0 0 20432 0 0 12127 0 0 17588 0 0 11929 0 0 17423 0 0 22831 0 0 19364 0 0 16215 0 0 19637 0 0 18582 0 0 20955 0 0 12697 0 0 17791 0 0 12451 0 0 18066 0 0 22065 0 0 18636 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25953000 25953000 0 0 NaN 2743 1495 473 473 1439 1516 1626 1796 1626 1796 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14170 1626 1796 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14170 1626 1796 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14170 Q8NCD3 642 Q8NCD3 Q8NCD3 Holliday junction recognition protein HJURP sp|Q8NCD3|HJURP_HUMAN Holliday junction recognition protein OS=Homo sapiens GN=HJURP PE=1 SV=2 0.99138 20.6074 0.000186924 128.87 101.65 128.87 1 S LNPDPHFQGFQKLPSSPLGCRKSLLGSTAIE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX LPS(0.009)S(0.991)PLGCR LPS(-20.61)S(20.61)PLGCR 4 2 0.66872 21081 0 0 30723 0 0 22675 0 0 32870 0 0 25121 0 0 24227 0 0 23383 0 0 23556 0 0 33952 0 0 7385.3 0 0 19954 0 0 29035 0 0 22767 0 0 33479 0 0 25334 0 0 24675 0 0 24175 0 0 23877 0 0 33052 0 0 7499.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30433000 30433000 0 0 NaN 2744 1495 642 642 2511 2652 2848 3177 2848 3177 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14103 2848 3177 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14103 2848 3177 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14103 Q8NCD3 486 Q8NCD3 Q8NCD3 Holliday junction recognition protein HJURP sp|Q8NCD3|HJURP_HUMAN Holliday junction recognition protein OS=Homo sapiens GN=HJURP PE=1 SV=2 0.999825 37.5828 0.00103266 103.46 47.744 103.46 1 S PASPGGLQGLETRRLSLPSSKAKAKSLSEAF X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX RLS(1)LPSSK RLS(37.58)LPS(-37.58)S(-64.17)K 3 3 -0.073235 16463 0 0 13210 0 0 17464 0 0 13639 0 0 12262 0 0 15089 0 0 12450 0 0 14850 0 0 13564 0 0 1101.9 0 0 15582 0 0 12481 0 0 17465 0 0 14001 0 0 12755 0 0 15059 0 0 12695 0 0 14938 0 0 13336 0 0 1381.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30104000 30104000 0 0 NaN 2745 1495 486 486 3333 3535 3772 4188 3772 4188 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13635 3772 4188 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13635 3772 4188 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13635 Q8NCD3 520 Q8NCD3 Q8NCD3 Holliday junction recognition protein HJURP sp|Q8NCD3|HJURP_HUMAN Holliday junction recognition protein OS=Homo sapiens GN=HJURP PE=1 SV=2 0.842118 7.33758 0.000273349 124.1 104.86 124.1 1 S GKRSLEAGRCLPKSDSSSSLPKTNPTHSATR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX SDS(0.842)S(0.155)S(0.002)SLPK S(-38.15)DS(7.34)S(-7.34)S(-26.65)S(-32.52)LPK 3 2 0.02882 25092 0 0 32875 0 0 23464 0 0 32567 0 0 24252 0 0 24940 0 0 26013 0 0 27893 0 0 36248 0 0 7935.1 0 0 23737 0 0 31054 0 0 23734 0 0 33335 0 0 24599 0 0 25391 0 0 26675 0 0 28104 0 0 35332 0 0 8117.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15632000 15632000 0 0 NaN 2746 1495 520 520 3677 3912 4172 4638 4172 4638 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10277 4172 4638 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10277 4172 4638 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10277 Q8NCD3 412 Q8NCD3 Q8NCD3 Holliday junction recognition protein HJURP sp|Q8NCD3|HJURP_HUMAN Holliday junction recognition protein OS=Homo sapiens GN=HJURP PE=1 SV=2 1 93.6488 0.00686715 93.649 57.705 93.649 1 S NLDEENRFRTLKWLISPVKIVSRPTIRQGHG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX WLIS(1)PVK WLIS(93.65)PVK 4 2 0.24114 13154 0 0 20655 0 0 14040 0 0 18075 0 0 8025 0 0 10741 0 0 7818.5 0 0 13384 0 0 20436 0 0 16712 0 0 12451 0 0 19497 0 0 14013 0 0 18599 0 0 8507.9 0 0 11159 0 0 8314 0 0 13827 0 0 19629 0 0 16046 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19356000 19356000 0 0 NaN 2747 1495 412 412 5342 5691 6069 6746 6069 6746 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22398 6069 6746 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22398 6069 6746 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22398 Q8NCE2 415 Q8NCE2 Q8NCE2 Myotubularin-related protein 14 MTMR14 sp|Q8NCE2|MTMRE_HUMAN Myotubularin-related protein 14 OS=Homo sapiens GN=MTMR14 PE=1 SV=2 1 56.3592 0.0381 56.359 30.316 56.359 1 S ITSEEFSALKTQRRKSLPARDGGFTLEDICM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX RKS(1)LPAR RKS(56.36)LPAR 3 3 -2.6712 86077 0 0 53961 0 0 82773 0 0 49322 0 0 142010 0 0 90677 0 0 150910 0 0 105400 0 0 61246 0 0 3864.4 0 0 81438 0 0 50948 0 0 84280 0 0 51590 0 0 140660 0 0 89236 0 0 150730 0 0 105270 0 0 64234 0 0 6078.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 95918000 95918000 0 0 NaN 2748 1496 415 415 3303 3504 3741 4157 3741 4157 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6862 3741 4157 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6862 3741 4157 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6862 Q8NCF5 314 Q8NCF5 Q8NCF5 NFATC2-interacting protein NFATC2IP sp|Q8NCF5|NF2IP_HUMAN NFATC2-interacting protein OS=Homo sapiens GN=NFATC2IP PE=1 SV=1 0.995294 23.4762 2.88788E-09 168.99 146.98 168.99 1 S VSPSRILLLFGETELSPTATPRTLKLGVADI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPXXXXXXXXX ILLLFGETELS(0.995)PT(0.004)ATPR ILLLFGET(-73.58)ELS(23.48)PT(-23.48)AT(-36.26)PR 11 3 2.7547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2749 1497 314 314 1885 1989 2147 2406 2147 2406 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24273 2147 2406 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24273 2147 2406 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24273 Q8NCF5 338 Q8NCF5 Q8NCF5 NFATC2-interacting protein NFATC2IP sp|Q8NCF5|NF2IP_HUMAN NFATC2-interacting protein OS=Homo sapiens GN=NFATC2IP PE=1 SV=1 0.956211 13.5222 3.22467E-12 203.75 184.26 203.75 1 S KLGVADIIDCVVLTSSPEATETSQQLQLRVQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPPPPPPPPPPPXX LGVADIIDCVVLT(0.001)S(0.042)S(0.956)PEATETSQQLQLR LGVADIIDCVVLT(-28.86)S(-13.52)S(13.52)PEAT(-42.71)ET(-65.67)S(-73.03)QQLQLR 15 3 0.737 5427.5 0 0 3974.2 0 0 4425.2 0 0 6672.3 0 0 4381.8 0 0 4798.9 0 0 4968.4 0 0 6434.9 0 0 5064.1 0 0 101130 0 0 5132.1 0 0 3769.6 0 0 4514.2 0 0 6656.1 0 0 4457.7 0 0 5104.7 0 0 5031.8 0 0 9438.4 0 0 4992.7 0 0 95373 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 69376000 69376000 0 0 NaN 2750 1497 338 338 2394 2531 2724 3043 2724 3043 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23998 2724 3043 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23998 2724 3043 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23998 Q8NCN4 403 Q8NCN4 Q8NCN4 E3 ubiquitin-protein ligase RNF169 RNF169 sp|Q8NCN4|RN169_HUMAN E3 ubiquitin-protein ligase RNF169 OS=Homo sapiens GN=RNF169 PE=1 SV=2 1 145.886 2.7326E-05 145.89 89.323 145.89 1 S SPCTPPKRLPDGRVLSPLIIKSTPRNLNRSL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX VLS(1)PLIIK VLS(145.89)PLIIK 3 2 0.27526 29122 0 0 41558 0 0 26943 0 0 41210 0 0 41456 0 0 28308 0 0 41137 0 0 38577 0 0 43726 0 0 16938 0 0 27549 0 0 39257 0 0 27432 0 0 42127 0 0 41211 0 0 29111 0 0 41960 0 0 38808 0 0 43035 0 0 16842 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 57122000 57122000 0 0 NaN 2751 1498 403 403 5177 5516 5878 6532 5878 6532 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23188 5878 6532 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23188 5878 6532 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23188 Q8NCP5 161 Q8NCP5 Q8NCP5 Zinc finger and BTB domain-containing protein 44 ZBTB44 sp|Q8NCP5|ZBT44_HUMAN Zinc finger and BTB domain-containing protein 44 OS=Homo sapiens GN=ZBTB44 PE=1 SV=1 0.983849 18.0784 1.19036E-31 316.86 280.29 316.86 1 S ENNSNCNFTSRDGSISPVSSECSVVERTIPV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPXXXX DGS(0.001)IS(0.984)PVS(0.015)SECSVVER DGS(-32.6)IS(18.08)PVS(-18.08)S(-35.21)ECS(-87.89)VVER 5 2 0.17445 12399 0 0 8659.5 0 0 12031 0 0 8366.5 0 0 15991 0 0 12465 0 0 16853 0 0 12807 0 0 8239.2 0 0 7525.6 0 0 11731 0 0 8178.6 0 0 12185 0 0 8674.2 0 0 15998 0 0 12330 0 0 16877 0 0 13060 0 0 8494.9 0 0 7382.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21799000 21799000 0 0 NaN 2752 1499 161 161 689 733 781 863 781 863 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13034 781 863 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13034 781 863 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13034 Q8ND24 176 Q8ND24 Q8ND24 RING finger protein 214 RNF214 sp|Q8ND24|RN214_HUMAN RING finger protein 214 OS=Homo sapiens GN=RNF214 PE=1 SV=2 0.995321 25.0377 0.00312859 97.691 57.512 97.691 1 S KEGNRDTSLDFRPVVSPANGVEGVRVDQDDD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPXXXXXX DT(0.002)S(0.003)LDFRPVVS(0.995)PANGVEGVR DT(-28.05)S(-25.04)LDFRPVVS(25.04)PANGVEGVR 11 3 -1.8415 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2753 1500 176 176 831 879 935 1030 935 1030 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18075 935 1030 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18075 935 1030 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18075 Q8ND24 150 Q8ND24 Q8ND24 RING finger protein 214 RNF214 sp|Q8ND24|RN214_HUMAN RING finger protein 214 OS=Homo sapiens GN=RNF214 PE=1 SV=2 0.999979 46.7515 0.00351816 91.889 63.92 91.889 1 S LKAGCHTKQLASRNCSEEKSPQTSILKEGNR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX NCS(1)EEKSPQTSILK NCS(46.75)EEKS(-46.75)PQT(-66.69)S(-72.34)ILK 3 3 -0.043339 13253 0 0 15460 0 0 14064 0 0 14388 0 0 25798 0 0 14963 0 0 26281 0 0 18813 0 0 15436 0 0 14247 0 0 12544 0 0 14598 0 0 14260 0 0 14848 0 0 25484 0 0 15048 0 0 26432 0 0 19151 0 0 15691 0 0 13850 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10235000 10235000 0 0 NaN 2754 1500 150 150 2785 2954 3164 3515 3164 3515 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13852 3164 3515 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13852 3164 3515 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13852 Q8ND30 362 Q8ND30 Q8ND30 Liprin-beta-2 PPFIBP2 sp|Q8ND30|LIPB2_HUMAN Liprin-beta-2 OS=Homo sapiens GN=PPFIBP2 PE=1 SV=3 0.590338 1.80581 5.78487E-05 127.3 113.14 127.3 1 S KDPEELFKQEMPPRCSSPTVGPPPLPQKSLE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPXXX CS(0.59)S(0.39)PT(0.02)VGPPPLPQK CS(1.81)S(-1.81)PT(-14.67)VGPPPLPQK 2 3 2.0756 11051 0 0 7071 0 0 11455 0 0 7638.5 0 0 7097.6 0 0 11033 0 0 7067.5 0 0 9871.7 0 0 7106.4 0 0 5587.5 0 0 10459 0 0 6682.9 0 0 11458 0 0 7862.8 0 0 7459.6 0 0 10903 0 0 7196.7 0 0 10115 0 0 7010.2 0 0 5489.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8186200 8186200 0 0 NaN 2755 1501 362 362 621 662 706 782 706 782 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15507 706 782 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15507 706 782 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15507 Q8ND56 216 Q8ND56 Q8ND56 Protein LSM14 homolog A LSM14A sp|Q8ND56|LS14A_HUMAN Protein LSM14 homolog A OS=Homo sapiens GN=LSM14A PE=1 SV=3 0.999979 48.0031 2.27796E-07 166.3 140.15 131.4 1 S TASAHLPAPAAVGRRSPVSTRPLPSASQKAG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPXX RS(1)PVSTRPLPSASQK RS(48)PVS(-48)T(-52.84)RPLPS(-86.57)AS(-119.03)QK 2 4 2.9402 79348 0 0 65197 0 0 81770 0 0 66561 0 0 68121 0 0 82371 0 0 79907 0 0 74346 0 0 66954 0 0 10360 0 0 75092 0 0 61597 0 0 82053 0 0 68514 0 0 70090 0 0 81778 0 0 80417 0 0 75198 0 0 66613 0 0 11476 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2405800000 2405800000 0 0 NaN 2756 1502 216 216 3488;4211 3705;4488 3951;4782 4389;5308 3951 4389 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8988 4782 5308 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10692 4782 5308 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10692 Q8ND56 192 Q8ND56 Q8ND56 Protein LSM14 homolog A LSM14A sp|Q8ND56|LS14A_HUMAN Protein LSM14 homolog A OS=Homo sapiens GN=LSM14A PE=1 SV=3 0.975275 15.96 1.11049E-17 223.65 199.46 223.65 1 S LSQGRSSPQLDPLRKSPTMEQAVQTASAHLP X;Phospho (STY);X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.975)PT(0.025)MEQAVQTASAHLPAPAAVGR S(15.96)PT(-15.96)MEQAVQT(-88.08)AS(-128.88)AHLPAPAAVGR 1 3 3.5859 11658 0 0 11359 0 0 12921 0 0 11056 0 0 11838 0 0 13421 0 0 14802 0 0 15860 0 0 12433 0 0 35017 0 0 11036 0 0 10729 0 0 12931 0 0 11408 0 0 12117 0 0 13443 0 0 14860 0 0 16869 0 0 12368 0 0 33340 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 29520000 29520000 0 0 NaN 2757 1502 192 192 4204 4481 4775 5300;5301 4775 5301 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19499 4775 5301 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19499 4775 5301 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19499 Q8ND56 182 Q8ND56 Q8ND56 Protein LSM14 homolog A LSM14A sp|Q8ND56|LS14A_HUMAN Protein LSM14 homolog A OS=Homo sapiens GN=LSM14A PE=1 SV=3 0.5 0 7.88779E-06 143 90.27 143 1 S TQDTRSLKTQLSQGRSSPQLDPLRKSPTMEQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(0.5)S(0.5)PQLDPLR S(0)S(0)PQLDPLR 1 2 1.1325 31041 0 0 27188 0 0 31345 0 0 33854 0 0 33298 0 0 32133 0 0 34993 0 0 32082 0 0 32842 0 0 7088.4 0 0 29374 0 0 25722 0 0 31573 0 0 34326 0 0 33697 0 0 32298 0 0 35479 0 0 32396 0 0 32497 0 0 7417.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 53205000 53205000 0 0 NaN 2758 1502 182 182 4395;4396;4874;4875 4683;4684;5199;5200 4987 5534 4987 5534 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14499 4987 5534 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14499 4987 5534 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14499 Q8ND56 183 Q8ND56 Q8ND56 Protein LSM14 homolog A LSM14A sp|Q8ND56|LS14A_HUMAN Protein LSM14 homolog A OS=Homo sapiens GN=LSM14A PE=1 SV=3 0.859464 7.86441 7.88779E-06 143 90.27 121.56 1;2 S QDTRSLKTQLSQGRSSPQLDPLRKSPTMEQA X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPXXXXXXX S(0.141)S(0.859)PQLDPLRK S(-7.86)S(7.86)PQLDPLRK 2 3 -0.33173 53357 19238 0 43786 14525 0 55668 18621 0 51153 15017 0 48018 18974 0 53172 17566 0 49798 19916 0 48887 20372 0 49958 15794 0 10073 10187 0 50498 18202 0 41405 13724 0 55831 18791 0 52105 15430 0 49206 19243 0 53172 17548 0 50609 20114 0 49507 20633 0 49286 15759 0 10617 10064 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 343720000 312660000 31060000 0 NaN 2759 1502 183 183 4395;4396;4874;4875 4683;4684;5199;5200 4987;4988;5538;5539 5534;5535;6156;6157 4988 5535 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14368 4987 5534 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14499 4987 5534 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14499 Q8ND56 178 Q8ND56 Q8ND56 Protein LSM14 homolog A LSM14A sp|Q8ND56|LS14A_HUMAN Protein LSM14 homolog A OS=Homo sapiens GN=LSM14A PE=1 SV=3 0.790956 5.98852 0.00797639 84.602 59.706 68.291 2 S GSAFTQDTRSLKTQLSQGRSSPQLDPLRKSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPXX T(0.21)QLS(0.791)QGRS(0.265)S(0.734)PQLDPLR T(-5.99)QLS(5.99)QGRS(-4.59)S(4.59)PQLDPLR 4 3 0.80538 0 19238 0 0 14525 0 0 18621 0 0 15017 0 0 18974 0 0 17566 0 0 19916 0 0 20372 0 0 15794 0 0 10187 0 0 18202 0 0 13724 0 0 18791 0 0 15430 0 0 19243 0 0 17548 0 0 20114 0 0 20633 0 0 15759 0 0 10064 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 31060000 0 31060000 0 NaN 2760 1502 178 178 4874;4875 5199;5200 5538;5539 6156;6157 5538 6156 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15147 5539 6157 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14910 5539 6157 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14910 Q8ND76 100 Q8ND76 Q8ND76 Cyclin-Y CCNY sp|Q8ND76|CCNY_HUMAN Cyclin-Y OS=Homo sapiens GN=CCNY PE=1 SV=2 0.68636 5.58638 5.89653E-24 283.81 265.25 283.81 1 S FINHHPPGQIARKYSSCSTIFLDDSTVSQPN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP KYS(0.19)S(0.686)CS(0.115)T(0.009)IFLDDSTVSQPNLK KY(-136.73)S(-5.59)S(5.59)CS(-7.75)T(-18.93)IFLDDS(-100.65)T(-121.7)VS(-174.42)QPNLK 4 3 0.81667 4201.8 0 0 4520.6 0 0 3466.5 0 0 5290.9 0 0 7249.1 0 0 3978.9 0 0 8140.8 0 0 6727.2 0 0 4685.5 0 0 50851 0 0 3973.2 0 0 4274.9 0 0 3580.8 0 0 5364.5 0 0 7142.4 0 0 4177 0 0 8149.2 0 0 8173.6 0 0 4769.8 0 0 48038 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21789000 21789000 0 0 NaN 2761 1503 100 100 2279 2408 2591 2896 2591 2896 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19344 2591 2896 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19344 2591 2896 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19344 Q8ND76 326 Q8ND76 Q8ND76 Cyclin-Y CCNY sp|Q8ND76|CCNY_HUMAN Cyclin-Y OS=Homo sapiens GN=CCNY PE=1 SV=2 0.77724 5.42811 0.000106495 125.29 86.489 125.29 1 S DKYKDLRRSARKRSASADNLTLPRWSPAIIS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX S(0.223)AS(0.777)ADNLTLPR S(-5.43)AS(5.43)ADNLT(-42.08)LPR 3 2 -0.36127 27976 0 0 38532 0 0 28047 0 0 38385 0 0 53145 0 0 28202 0 0 48205 0 0 41536 0 0 43737 0 0 22414 0 0 26473 0 0 36399 0 0 28535 0 0 39258 0 0 52376 0 0 28932 0 0 49184 0 0 41822 0 0 43345 0 0 22067 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 139980000 139980000 0 0 NaN 2762 1503 326 326 3598 3825 4078 4534 4078 4534 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13785 4078 4534 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13785 4078 4534 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13785 Q8ND82 80 Q8ND82 Q8ND82 Zinc finger protein 280C ZNF280C sp|Q8ND82|Z280C_HUMAN Zinc finger protein 280C OS=Homo sapiens GN=ZNF280C PE=1 SV=1 0.999933 41.7225 4.83937E-07 148.33 123.53 148.33 1 S GHSSSSSKGIKSEPHSPGIPEIFRTASQRCR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPXXXXXXX SEPHS(1)PGIPEIFR S(-41.72)EPHS(41.72)PGIPEIFR 5 3 0.21559 6845.1 0 0 7948.9 0 0 5722.4 0 0 7001.6 0 0 5792.5 0 0 7272.8 0 0 6094.1 0 0 7315.6 0 0 6769.2 0 0 3081.9 0 0 6473 0 0 7503.7 0 0 5828.1 0 0 7251.2 0 0 5879 0 0 7284.2 0 0 6207.3 0 0 7429.3 0 0 6650.5 0 0 3071.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21641000 21641000 0 0 NaN 2763 1504 80 80 3692 3927 4187 4653 4187 4653 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17826 4187 4653 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17826 4187 4653 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17826 Q8NDC0 15 Q8NDC0 Q8NDC0 MAPK-interacting and spindle-stabilizing protein-like MAPK1IP1L sp|Q8NDC0|MISSL_HUMAN MAPK-interacting and spindle-stabilizing protein-like OS=Homo sapiens GN=MAPK1IP1L PE=1 SV=4 1 95.7852 2.77822E-31 197.85 182.46 197.85 1 S _MSDEFSLADALPEHSPAKTSAVSNTKPGQP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPXXXXXXXXXXXX SDEFSLADALPEHS(1)PAK S(-113.35)DEFS(-95.79)LADALPEHS(95.79)PAK 14 3 -0.0062494 4385.1 0 0 4310.3 0 0 4625.6 0 0 5246.8 0 0 3597.1 0 0 4473.8 0 0 4199.3 0 0 5946.9 0 0 5001.8 0 0 18580 0 0 4150.3 0 0 4077.2 0 0 4632.4 0 0 5317.7 0 0 3720.3 0 0 4572.3 0 0 4267.6 0 0 6467.9 0 0 4901.3 0 0 17633 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23774000 23774000 0 0 NaN 2764 1505 15 15 3656 3888 4143 4606 4143 4606 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20462 4143 4606 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20462 4143 4606 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20462 Q8NDH2 650 Q8NDH2 Q8NDH2 Coiled-coil domain-containing protein 168 CCDC168 sp|Q8NDH2|CC168_HUMAN Coiled-coil domain-containing protein 168 OS=Homo sapiens GN=CCDC168 PE=2 SV=2 1 40.3494 0.0500565 40.349 16.518 40.349 1 S KHVSQNKEEDDVQIVSILIFPKHQEEKVQEC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPXXXXXXXXX EEDDVQIVS(1)ILIFPK EEDDVQIVS(40.35)ILIFPK 9 3 -1.1541 13300 0 0 20429 0 0 15257 0 0 20356 0 0 15789 0 0 14462 0 0 14936 0 0 17440 0 0 21738 0 0 26983 0 0 12592 0 0 19298 0 0 15255 0 0 20811 0 0 15986 0 0 14847 0 0 15431 0 0 18191 0 0 21161 0 0 25811 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 52857000 52857000 0 0 NaN 2765 1506 650 650 918 972 1054 1163 1054 1163 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12275 1054 1163 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12275 1054 1163 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12275 Q8NDI1 428 Q8NDI1 Q8NDI1 EH domain-binding protein 1 EHBP1 sp|Q8NDI1|EHBP1_HUMAN EH domain-binding protein 1 OS=Homo sapiens GN=EHBP1 PE=1 SV=3 0.709219 4.83886 0.00535683 86.761 67.725 86.761 1 S VLNENTVSAGKDLSTSPKPSPIPSPVLGRKP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPXX DLS(0.058)T(0.233)S(0.709)PKPSPIPSPVLGR DLS(-10.89)T(-4.84)S(4.84)PKPS(-33.97)PIPS(-59.91)PVLGR 5 3 0.071083 6686.5 0 0 7774.6 0 0 6985.2 0 0 7384.7 0 0 14554 0 0 6626.8 0 0 15905 0 0 10967 0 0 8364.3 0 0 14363 0 0 6328.2 0 0 7342.2 0 0 7111.7 0 0 7594 0 0 14334 0 0 6757.7 0 0 15918 0 0 11265 0 0 8572.9 0 0 13778 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11770000 11770000 0 0 NaN 2766 1507 428 428 748 792 843 930 843 930 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17727 843 930 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17727 843 930 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17727 Q8NDI1 1058 Q8NDI1 Q8NDI1 EH domain-binding protein 1 EHBP1 sp|Q8NDI1|EHBP1_HUMAN EH domain-binding protein 1 OS=Homo sapiens GN=EHBP1 PE=1 SV=3 1 79.3174 0.00808818 79.317 52.288 79.317 1 S GNEEKAAITETQRKPSEDEVLNKGFKDTSQY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX KPS(1)EDEVLNK KPS(79.32)EDEVLNK 3 3 0.41953 18634 0 0 14746 0 0 20097 0 0 15880 0 0 14377 0 0 18873 0 0 15892 0 0 16904 0 0 13754 0 0 8840.3 0 0 17638 0 0 13937 0 0 20085 0 0 16284 0 0 14947 0 0 18776 0 0 16045 0 0 17298 0 0 13661 0 0 8715.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18680000 18680000 0 0 NaN 2767 1507 1058 1058 2162 2284 2458 2738 2458 2738 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13197 2458 2738 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13197 2458 2738 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13197 Q8NDI1 751 Q8NDI1 Q8NDI1 EH domain-binding protein 1 EHBP1 sp|Q8NDI1|EHBP1_HUMAN EH domain-binding protein 1 OS=Homo sapiens GN=EHBP1 PE=1 SV=3 0.999303 31.5659 0.00717527 81.92 57.065 81.92 1 S KLENSRSLECRSDPESPIKKTSLSPTSKLGY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX S(0.001)DPES(0.999)PIKK S(-31.57)DPES(31.57)PIKK 5 3 1.3769 13699 0 0 18036 0 0 15454 0 0 17907 0 0 14126 0 0 15831 0 0 15552 0 0 17438 0 0 19076 0 0 5234.5 0 0 12969 0 0 17038 0 0 15447 0 0 18361 0 0 14437 0 0 15991 0 0 15859 0 0 17587 0 0 18673 0 0 5332.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16928000 16928000 0 0 NaN 2768 1507 751 751 3667 3902 4162 4627 4162 4627 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10511 4162 4627 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10511 4162 4627 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10511 Q8NDT2 109 Q8NDT2 Q8NDT2 Putative RNA-binding protein 15B RBM15B sp|Q8NDT2|RB15B_HUMAN Putative RNA-binding protein 15B OS=Homo sapiens GN=RBM15B PE=1 SV=3 0.999994 52.3168 7.86773E-07 144.97 88.03 144.97 1 S GRGGKASGDPGASGMSPRASPLPPPPPPPGA X;X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPXXXXXXXXXXXXX ASGDPGASGMS(1)PR AS(-100.77)GDPGAS(-52.32)GMS(52.32)PR 11 2 0.14633 4879.2 0 0 3713.1 0 0 5192.1 0 0 3114.9 0 0 4829.8 0 0 5327.5 0 0 5523.1 0 0 4632.4 0 0 3676.1 0 0 1849.5 0 0 4618.2 0 0 3504.2 0 0 5207.1 0 0 3270.3 0 0 4930.8 0 0 5236 0 0 5538.2 0 0 4729.3 0 0 3705.5 0 0 1848.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9642400 9642400 0 0 NaN 2769 1508 109 109 456 485 520 582 520 582 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5579 520 582 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5579 520 582 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5579 Q8NDT2 562 Q8NDT2 Q8NDT2 Putative RNA-binding protein 15B RBM15B sp|Q8NDT2|RB15B_HUMAN Putative RNA-binding protein 15B OS=Homo sapiens GN=RBM15B PE=1 SV=3 0.999999 59.3313 1.00784E-06 172.28 77.476 172.28 1 S EGDWTSPSKSSDRRNSLEGYSRSVRSRSGER X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX RNS(1)LEGYSR RNS(59.33)LEGY(-122.72)S(-59.33)R 3 2 0.12608 14092 0 0 10644 0 0 14879 0 0 9363.8 0 0 16338 0 0 14544 0 0 16685 0 0 15524 0 0 9672.2 0 0 3064 0 0 13337 0 0 10048 0 0 14955 0 0 9775.9 0 0 16492 0 0 14365 0 0 16776 0 0 15626 0 0 9841 0 0 3244.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23784000 23784000 0 0 NaN 2770 1508 562 562 3361 3564 3802 4220 3802 4220 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7367 3802 4220 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7367 3802 4220 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7367 Q8NDT2 267 Q8NDT2 Q8NDT2 Putative RNA-binding protein 15B RBM15B sp|Q8NDT2|RB15B_HUMAN Putative RNA-binding protein 15B OS=Homo sapiens GN=RBM15B PE=1 SV=3 0.998009 26.9999 3.14869E-05 132.5 104.22 132.5 1 S YLPLHGGYQYKQRSLSPVAAPPLREPRARHA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX S(0.002)LS(0.998)PVAAPPLREPR S(-27)LS(27)PVAAPPLREPR 3 3 0.32573 13742 0 0 13024 0 0 16007 0 0 12231 0 0 16215 0 0 15475 0 0 14492 0 0 15621 0 0 14049 0 0 4751.5 0 0 13012 0 0 12299 0 0 15987 0 0 12659 0 0 16418 0 0 15378 0 0 14822 0 0 15807 0 0 13881 0 0 4835.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 50155000 50155000 0 0 NaN 2771 1508 267 267 3999 4264 4552 5060 4552 5060 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14484 4552 5060 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14484 4552 5060 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14484 Q8NDT2 552 Q8NDT2 Q8NDT2 Putative RNA-binding protein 15B RBM15B sp|Q8NDT2|RB15B_HUMAN Putative RNA-binding protein 15B OS=Homo sapiens GN=RBM15B PE=1 SV=3 0.961629 14.0364 0.0032798 91.812 69.279 91.812 1 S LYSDRDRTFLEGDWTSPSKSSDRRNSLEGYS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X XXXXXXXPPPPPPPPPPPPXXXXXXXXXXXX TFLEGDWT(0.038)S(0.962)PSK T(-70.25)FLEGDWT(-14.04)S(14.04)PS(-33.73)K 9 3 -0.44386 7569.9 0 0 8200 0 0 9022.9 0 0 6676 0 0 6497.7 0 0 8105 0 0 7469.4 0 0 8215.7 0 0 6858.1 0 0 7486.1 0 0 7168.5 0 0 7737.6 0 0 8972.9 0 0 6970.7 0 0 6756.1 0 0 8075.8 0 0 7539.8 0 0 8462.2 0 0 6792.8 0 0 7239.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 40484000 40484000 0 0 NaN 2772 1508 552 552 4705 5016 5343 5938 5343 5938 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20857 5343 5938 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20857 5343 5938 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20857 Q8NDV7 338 Q8NDV7 Q8NDV7 Trinucleotide repeat-containing gene 6A protein TNRC6A sp|Q8NDV7|TNR6A_HUMAN Trinucleotide repeat-containing gene 6A protein OS=Homo sapiens GN=TNRC6A PE=1 SV=2 0.621689 2.24304 0.039466 56.434 16.484 56.434 1 S TCQVSVDAPESKSESSNNRMNAWGTVSSSSN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX S(0.007)ES(0.371)S(0.622)NNR S(-19.24)ES(-2.24)S(2.24)NNR 4 2 4.03 18565 0 0 23006 0 0 16151 0 0 24017 0 0 26113 0 0 15748 0 0 27503 0 0 23813 0 0 23731 0 0 1865.7 0 0 17558 0 0 21739 0 0 16526 0 0 24466 0 0 25927 0 0 16258 0 0 27825 0 0 23630 0 0 23575 0 0 2307.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 67836000 67836000 0 0 NaN 2773 1509 338 338 3716 3951 4211 4678 4211 4678 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8931 4211 4678 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8931 4211 4678 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8931 Q8NDX1 134 Q8NDX1 Q8NDX1 PH and SEC7 domain-containing protein 4 PSD4 sp|Q8NDX1|PSD4_HUMAN PH and SEC7 domain-containing protein 4 OS=Homo sapiens GN=PSD4 PE=1 SV=2 0.996874 26.4225 1.17854E-07 160.93 133.66 160.93 2 S PSAQREHRQNTASPGSPVNSHLPGSPKQNRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPXXXX QNTAS(0.002)PGS(0.997)PVNS(0.001)HLPGS(1)PK QNT(-38.62)AS(-26.42)PGS(26.42)PVNS(-31.43)HLPGS(73.45)PK 8 3 -0.0037737 0 43567 0 0 33427 0 0 47401 0 0 34289 0 0 45192 0 0 46895 0 0 41568 0 0 44114 0 0 39025 0 0 29331 0 0 41240 0 0 31582 0 0 47476 0 0 35357 0 0 45938 0 0 46463 0 0 42417 0 0 45241 0 0 38614 0 0 28640 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 39032000 0 39032000 0 NaN 2774 1511 134 134 3095 3283 3513 3894;3895 3513 3895 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11598 3513 3895 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11598 3513 3895 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11598 Q8NDX1 143 Q8NDX1 Q8NDX1 PH and SEC7 domain-containing protein 4 PSD4 sp|Q8NDX1|PSD4_HUMAN PH and SEC7 domain-containing protein 4 OS=Homo sapiens GN=PSD4 PE=1 SV=2 1 73.4459 1.17854E-07 160.93 133.66 160.93 2 S NTASPGSPVNSHLPGSPKQNRSTSTQVVFWA X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX QNTAS(0.002)PGS(0.997)PVNS(0.001)HLPGS(1)PK QNT(-38.62)AS(-26.42)PGS(26.42)PVNS(-31.43)HLPGS(73.45)PK 17 3 -0.0037737 0 43567 0 0 33427 0 0 47401 0 0 34289 0 0 45192 0 0 46895 0 0 41568 0 0 44114 0 0 39025 0 0 29331 0 0 41240 0 0 31582 0 0 47476 0 0 35357 0 0 45938 0 0 46463 0 0 42417 0 0 45241 0 0 38614 0 0 28640 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 39032000 0 39032000 0 NaN 2775 1511 143 143 3095 3283 3513 3894;3895 3513 3895 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11598 3513 3895 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11598 3513 3895 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11598 Q8NDX5 616 Q8NDX5 Q8NDX5 Polyhomeotic-like protein 3 PHC3 sp|Q8NDX5|PHC3_HUMAN Polyhomeotic-like protein 3 OS=Homo sapiens GN=PHC3 PE=1 SV=1 0.6956 3.58972 4.46568E-07 145.79 130.09 145.79 2 S DECVRMDRTPPPPTLSPAAITVGRGEDLTSE X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPXXXXXXX MDRT(1)PPPPT(0.304)LS(0.696)PAAITVGR MDRT(79.93)PPPPT(-3.59)LS(3.59)PAAIT(-42.45)VGR 11 3 0.42011 0 8980.7 0 0 5959.7 0 0 10786 0 0 7946.2 0 0 6471.1 0 0 9295.3 0 0 6585.4 0 0 8813.9 0 0 7453.9 0 0 14553 0 0 8504.8 0 0 5641.2 0 0 10705 0 0 8059.3 0 0 6824.1 0 0 9278.3 0 0 6721.7 0 0 9298.2 0 0 7318 0 0 13907 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 16122000 0 16122000 0 NaN 2776 1512 616 616 2675 2827 3032 3377 3032 3377 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17382 3032 3377 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17382 3032 3377 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17382 Q8NDX6 44 Q8NDX6 Q8NDX6 Zinc finger protein 740 ZNF740 sp|Q8NDX6|ZN740_HUMAN Zinc finger protein 740 OS=Homo sapiens GN=ZNF740 PE=1 SV=1 1 135.718 0.000156562 135.72 65.662 135.72 1 S SQIASKQAENGERAGSPDVLRCSSQGHRKDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX AGS(1)PDVLR AGS(135.72)PDVLR 3 2 -1.1576 76800 0 0 58530 0 0 76776 0 0 57155 0 0 62399 0 0 73368 0 0 57767 0 0 69633 0 0 66814 0 0 3392.8 0 0 72672 0 0 55284 0 0 77125 0 0 59030 0 0 64115 0 0 72776 0 0 59272 0 0 70094 0 0 65542 0 0 4806.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 133500000 133500000 0 0 NaN 2777 1513 44 44 225 239 257 288 257 288 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10609 257 288 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10609 257 288 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10609 Q8NE71 228 Q8NE71 Q8NE71 ATP-binding cassette sub-family F member 1 ABCF1 sp|Q8NE71|ABCF1_HUMAN ATP-binding cassette sub-family F member 1 OS=Homo sapiens GN=ABCF1 PE=1 SV=2 1 216.246 9.40203E-24 267.63 252.88 267.63 1 S PPKQGKEKAKKAEQGSEEEGEGEEEEEEGGE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP AEQGS(1)EEEGEGEEEEEEGGESK AEQGS(216.25)EEEGEGEEEEEEGGES(-216.25)K 5 3 -0.11841 13538 0 0 23406 0 0 16050 0 0 22712 0 0 13786 0 0 16573 0 0 14886 0 0 18309 0 0 26570 0 0 8890 0 0 12820 0 0 22107 0 0 15991 0 0 23264 0 0 14151 0 0 16925 0 0 15419 0 0 18566 0 0 25721 0 0 8794.8 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 67060000 67060000 0 0 NaN 2778 1514 228 228 155;2002 161;2117 174;2281 198;2547 174 198 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8670 174 198 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8670 174 198 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8670 Q8NE71 166 Q8NE71 Q8NE71 ATP-binding cassette sub-family F member 1 ABCF1 sp|Q8NE71|ABCF1_HUMAN ATP-binding cassette sub-family F member 1 OS=Homo sapiens GN=ABCF1 PE=1 SV=2 1 105.652 0.000155928 105.65 83.894 105.65 1 S PKPAKPEKNRINKAVSEEQQPALKGKKGKEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX AVS(1)EEQQPALK AVS(105.65)EEQQPALK 3 3 -0.52922 9868.5 0 0 9748.2 0 0 9572.2 0 0 10333 0 0 9791 0 0 9867.2 0 0 8930.5 0 0 8206.9 0 0 9714.2 0 0 2860 0 0 9337.1 0 0 9212.2 0 0 9656.7 0 0 10567 0 0 9911.6 0 0 9895.7 0 0 9153.3 0 0 8382.6 0 0 9551.8 0 0 2883 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11712000 11712000 0 0 NaN 2779 1514 166 166 564 601 642 717 642 717 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12239 642 717 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12239 642 717 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12239 Q8NE71 109 Q8NE71 Q8NE71 ATP-binding cassette sub-family F member 1 ABCF1 sp|Q8NE71|ABCF1_HUMAN ATP-binding cassette sub-family F member 1 OS=Homo sapiens GN=ABCF1 PE=1 SV=2 0.973703 15.6857 1.88817E-07 142.25 115.52 120.32 1 S EKELMERLKKLSVPTSDEEDEVPAPKPRGGK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPXXX LSVPT(0.026)S(0.974)DEEDEVPAPKPR LS(-55.94)VPT(-15.69)S(15.69)DEEDEVPAPKPR 6 4 0.73401 43271 0 0 55942 0 0 49313 0 0 56113 0 0 44576 0 0 45741 0 0 44583 0 0 50240 0 0 61269 0 0 24231 0 0 40968 0 0 52848 0 0 49250 0 0 57438 0 0 45531 0 0 46413 0 0 45839 0 0 50950 0 0 59746 0 0 23979 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 287570000 287570000 0 0 NaN 2780 1514 109 109 2136;2608 2257;2755 2430;2954;2955 2707;3291;3292 2954 3291 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15455 2430 2707 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14505 2430 2707 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14505 Q8NEF9 203 Q8NEF9 Q8NEF9 Serum response factor-binding protein 1 SRFBP1 sp|Q8NEF9|SRFB1_HUMAN Serum response factor-binding protein 1 OS=Homo sapiens GN=SRFBP1 PE=1 SV=1 0.891522 9.15171 6.50097E-07 148.26 125.38 148.26 1 S IAKMEHGPKAVTIANSPSKPSEKDSVVSLES X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPXXXXXXXX AVTIANS(0.892)PS(0.108)KPSEK AVT(-46.72)IANS(9.15)PS(-9.15)KPS(-40.69)EK 7 3 0.13564 36871 0 0 84725 0 0 37897 0 0 81200 0 0 37017 0 0 38196 0 0 31968 0 0 54658 0 0 93088 0 0 9841.2 0 0 34893 0 0 80017 0 0 38080 0 0 82897 0 0 37603 0 0 40430 0 0 34457 0 0 54484 0 0 89257 0 0 10532 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 68683000 68683000 0 0 NaN 2781 1515 203 203 572 610 651 726 651 726 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12018 651 726 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12018 651 726 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12018 Q8NEM0 333 Q8NEM0 Q8NEM0 Microcephalin MCPH1 sp|Q8NEM0|MCPH1_HUMAN Microcephalin OS=Homo sapiens GN=MCPH1 PE=1 SV=3 0.96802 14.814 9.59458E-05 118.2 88.392 118.2 1 S AAGMSQETFEEKYRLSPTLSSTKGHLLIHSR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX YRLS(0.968)PT(0.032)LSSTK Y(-45.24)RLS(14.81)PT(-14.81)LS(-62.8)S(-84.9)T(-90.11)K 4 3 0.34367 26045 0 0 20212 0 0 27350 0 0 21419 0 0 14643 0 0 25205 0 0 16116 0 0 22605 0 0 20449 0 0 3116.6 0 0 24650 0 0 19100 0 0 27312 0 0 21979 0 0 15635 0 0 25068 0 0 16452 0 0 22869 0 0 19993 0 0 3457.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 48326000 48326000 0 0 NaN 2782 1516 333 333 5418 5771 6161 6856 6161 6856 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14613 6161 6856 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14613 6161 6856 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14613 Q8NEQ6 147 Q8NEQ6 Q8NEQ6 Uncharacterized protein C1orf64 C1orf64 sp|Q8NEQ6|CA064_HUMAN Uncharacterized protein C1orf64 OS=Homo sapiens GN=C1orf64 PE=2 SV=1 0.775925 9.11312 0.052426 49.444 10.894 49.444 1 S VPEAKGKPVKAAPVRSSTWGTVKDSLKALSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX S(0.776)S(0.095)T(0.095)WGT(0.034)VK S(9.11)S(-9.11)T(-9.11)WGT(-13.62)VK 1 2 0.28435 83219 0 0 36500 0 0 85987 0 0 34151 0 0 24577 0 0 83898 0 0 23350 0 0 46400 0 0 38373 0 0 7773.5 0 0 78757 0 0 34467 0 0 85671 0 0 36007 0 0 28563 0 0 81420 0 0 24239 0 0 48230 0 0 37226 0 0 8393.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 88919000 88919000 0 0 NaN 2783 1517 147 147 4487 4779 5089 5648 5089 5648 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13931 5089 5648 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13931 5089 5648 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13931 Q8NEY8 133 Q8NEY8 Q8NEY8 Periphilin-1 PPHLN1 sp|Q8NEY8|PPHLN_HUMAN Periphilin-1 OS=Homo sapiens GN=PPHLN1 PE=1 SV=2 1 74.3052 1.89136E-05 134.08 98.981 123.18 1 S RERSPYKRDNTFFRESPVGRKDSPHSRSGSS X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX DNTFFRES(1)PVGR DNT(-74.31)FFRES(74.31)PVGR 8 2 0.16902 31169 0 0 29619 0 0 32934 0 0 27925 0 0 30548 0 0 30511 0 0 31133 0 0 34220 0 0 30023 0 0 30735 0 0 29501 0 0 27971 0 0 33033 0 0 28818 0 0 31148 0 0 30572 0 0 31632 0 0 35108 0 0 29671 0 0 29733 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 331560000 331560000 0 0 NaN 2784 1518 133 133 770 816 870;871 961;962 871 962 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14047 870 961 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13925 870 961 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13925 Q8NEY8 205 Q8NEY8 Q8NEY8 Periphilin-1 PPHLN1 sp|Q8NEY8|PPHLN_HUMAN Periphilin-1 OS=Homo sapiens GN=PPHLN1 PE=1 SV=2 0.999759 39.2144 4.33295E-42 355.75 286.03 355.75 1 S DKERPVQSLKTSRDTSPSSGSAVSSSKVLDK X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX DTS(1)PSSGSAVSSSK DT(-39.21)S(39.21)PS(-39.21)S(-58.22)GS(-102.16)AVS(-157.5)S(-183.21)S(-202.54)K 3 2 0.53211 34883 0 0 28590 0 0 37671 0 0 25301 0 0 34990 0 0 35324 0 0 43219 0 0 37810 0 0 29751 0 0 1752.5 0 0 33019 0 0 26989 0 0 37755 0 0 26341 0 0 35770 0 0 34994 0 0 43229 0 0 37883 0 0 29927 0 0 2525.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 170280000 170280000 0 0 NaN 2785 1518 205 205 832;4951 880;5279 936 1031 936 1031 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7915 936 1031 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7915 936 1031 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7915 Q8NEY8 201 Q8NEY8 Q8NEY8 Periphilin-1 PPHLN1 sp|Q8NEY8|PPHLN_HUMAN Periphilin-1 OS=Homo sapiens GN=PPHLN1 PE=1 SV=2 0.555304 0.951649 4.29165E-05 132.72 112.62 132.72 2 S NPERDKERPVQSLKTSRDTSPSSGSAVSSSK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP T(0.448)S(0.555)RDT(0.811)S(0.185)PS(0.001)SGSAVSSSK T(-0.95)S(0.95)RDT(6.45)S(-6.45)PS(-31.13)S(-46.2)GS(-60.22)AVS(-90.2)S(-94.29)S(-98.23)K 2 3 0.99384 0 24566 0 0 20100 0 0 27972 0 0 22139 0 0 24119 0 0 25704 0 0 25773 0 0 25776 0 0 21251 0 0 7496.6 0 0 23259 0 0 19000 0 0 27926 0 0 22665 0 0 24723 0 0 25621 0 0 26032 0 0 26078 0 0 21160 0 0 7655.5 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 33874000 0 33874000 0 NaN 2786 1518 201 201 1126;4951 1185;5279 5622 6248;6249 5622 6248 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7435 5622 6248 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7435 5622 6248 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7435 Q8NEY8 121 Q8NEY8 Q8NEY8 Periphilin-1 PPHLN1 sp|Q8NEY8|PPHLN_HUMAN Periphilin-1 OS=Homo sapiens GN=PPHLN1 PE=1 SV=2 0.995887 23.8404 0.0498909 50.297 20.042 50.297 1 S FRRKSFYSSHYARERSPYKRDNTFFRESPVG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX ERS(0.996)PY(0.004)KR ERS(23.84)PY(-23.84)KR 3 3 0.43678 60586 0 0 43317 0 0 63048 0 0 42368 0 0 47682 0 0 60625 0 0 58265 0 0 54731 0 0 48182 0 0 13379 0 0 57339 0 0 40914 0 0 63176 0 0 43853 0 0 49435 0 0 59904 0 0 58524 0 0 55530 0 0 47969 0 0 13864 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 231430000 231430000 0 0 NaN 2787 1518 121 121 1141 1201 1293 1422 1293 1422 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5631 1293 1422 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5631 1293 1422 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5631 Q8NEY8 172 Q8NEY8 Q8NEY8 Periphilin-1 PPHLN1 sp|Q8NEY8|PPHLN_HUMAN Periphilin-1 OS=Homo sapiens GN=PPHLN1 PE=1 SV=2 0.999997 56.8539 0.00802462 75.479 22.55 75.479 1 S ERSKSYSFHQSQHRKSVRPGASYKRQNEGNP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(1)VRPGASYK S(56.85)VRPGAS(-56.85)Y(-59.91)K 1 3 -0.2648 38672 0 0 15682 0 0 36779 0 0 14526 0 0 14691 0 0 41669 0 0 16860 0 0 22277 0 0 15153 0 0 3716.2 0 0 36587 0 0 14808 0 0 36876 0 0 15422 0 0 16242 0 0 40319 0 0 17011 0 0 23209 0 0 15024 0 0 4014.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21525000 21525000 0 0 NaN 2788 1518 172 172 4562 4866 5183 5755 5183 5755 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9110 5183 5755 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9110 5183 5755 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9110 Q8NEZ4 4267 Q8NEZ4 Q8NEZ4 Histone-lysine N-methyltransferase 2C KMT2C sp|Q8NEZ4|KMT2C_HUMAN Histone-lysine N-methyltransferase 2C OS=Homo sapiens GN=KMT2C PE=1 SV=3 0.978099 17.2832 0.0207246 59.324 56.194 59.324 1 S AKNSENKESIPSLPQSPMRETPSKAFHQYSN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPXXXXXXXXXXXX NS(0.001)ENKES(0.003)IPS(0.018)LPQS(0.978)PMR NS(-31.83)ENKES(-25.17)IPS(-17.28)LPQS(17.28)PMR 14 3 -0.022046 24881 0 0 26229 0 0 25398 0 0 23315 0 0 21712 0 0 24186 0 0 19185 0 0 24657 0 0 26073 0 0 30936 0 0 23545 0 0 24761 0 0 25495 0 0 24131 0 0 22221 0 0 24268 0 0 19839 0 0 25647 0 0 25434 0 0 29701 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 17129000 17129000 0 0 NaN 2789 1519 4267 4267 1152;2913 1212;3087 1304;3307 1435;3667 3307 3667 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14721 3307 3667 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14721 3307 3667 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14721 Q8NF50 451 Q8NF50 Q8NF50 Dedicator of cytokinesis protein 8 DOCK8 sp|Q8NF50|DOCK8_HUMAN Dedicator of cytokinesis protein 8 OS=Homo sapiens GN=DOCK8 PE=1 SV=3 1 102.67 7.23626E-07 145.46 126.67 145.46 1 S RRTLAQSRRLSERALSLEENGVGSNFKTSTL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX ALS(1)LEENGVGSNFK ALS(102.67)LEENGVGS(-102.67)NFK 3 3 -3.1724 46643 0 0 10531 0 0 47326 0 0 10303 0 0 37707 0 0 45393 0 0 35991 0 0 32327 0 0 13548 0 0 25762 0 0 44139 0 0 9946.7 0 0 47494 0 0 11156 0 0 38788 0 0 43818 0 0 36104 0 0 33709 0 0 14320 0 0 25006 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 162000000 162000000 0 0 NaN 2790 1520 451 451 312 333 354;355 394;395 354 394 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18727 354 394 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18727 354 394 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18727 Q8NF50 2099 Q8NF50 Q8NF50 Dedicator of cytokinesis protein 8 DOCK8 sp|Q8NF50|DOCK8_HUMAN Dedicator of cytokinesis protein 8 OS=Homo sapiens GN=DOCK8 PE=1 SV=3 0.927385 11.0623 2.40254E-06 156.14 148.54 156.14 1 S HRSSFRKCETQLSQGS_______________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPXXXXXXXXXXXXXXX KCETQLS(0.073)QGS(0.927) KCET(-99.2)QLS(-11.06)QGS(11.06) 10 2 0.033042 22969 0 0 10729 0 0 22177 0 0 8749.8 0 0 58612 0 0 22151 0 0 66181 0 0 30787 0 0 8457.1 0 0 4190.9 0 0 21731 0 0 10124 0 0 22836 0 0 9320.2 0 0 57381 0 0 21721 0 0 65423 0 0 30673 0 0 10793 0 0 4658.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 72042000 72042000 0 0 NaN 2791 1520 2099 2099 2023 2141 2307 2574 2307 2574 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8258 2307 2574 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8258 2307 2574 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8258 Q8NF50 1243 Q8NF50 Q8NF50 Dedicator of cytokinesis protein 8 DOCK8 sp|Q8NF50|DOCK8_HUMAN Dedicator of cytokinesis protein 8 OS=Homo sapiens GN=DOCK8 PE=1 SV=3 0.463139 0 4.58055E-35 311.16 294.08 311.16 S QLCDFTVADTRRYRTSGSDEEQEGAGAINQN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX YRT(0.463)S(0.463)GS(0.074)DEEQEGAGAINQNVALAIAGNNFNLK Y(-67.19)RT(0)S(0)GS(-7.98)DEEQEGAGAINQNVALAIAGNNFNLK 4 4 0.2674 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2792 1520 1243 1243 4915;5421 5240;5774 6164 6860 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22408 6164 6860 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22408 6164 6860 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22408 Q8NF50 1245 Q8NF50 Q8NF50 Dedicator of cytokinesis protein 8 DOCK8 sp|Q8NF50|DOCK8_HUMAN Dedicator of cytokinesis protein 8 OS=Homo sapiens GN=DOCK8 PE=1 SV=3 0.594912 4.67932 5.3806E-35 309.32 294.86 309.32 1 S CDFTVADTRRYRTSGSDEEQEGAGAINQNVA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP T(0.203)S(0.203)GS(0.595)DEEQEGAGAINQNVALAIAGNNFNLK T(-4.68)S(-4.68)GS(4.68)DEEQEGAGAINQNVALAIAGNNFNLK 4 4 -0.44301 12501 0 0 8321.9 0 0 14321 0 0 6098 0 0 16464 0 0 11953 0 0 14372 0 0 18589 0 0 10244 0 0 350620 0 0 11836 0 0 7848.7 0 0 14338 0 0 6491.1 0 0 16548 0 0 12464 0 0 14617 0 0 28954 0 0 10283 0 0 330580 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 260630000 260630000 0 0 NaN 2793 1520 1245 1245 4915;5421 5240;5774 5583 6205 5583 6205 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23283 5583 6205 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23283 5583 6205 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23283 Q8NF50 904 Q8NF50 Q8NF50 Dedicator of cytokinesis protein 8 DOCK8 sp|Q8NF50|DOCK8_HUMAN Dedicator of cytokinesis protein 8 OS=Homo sapiens GN=DOCK8 PE=1 SV=3 0.971239 15.4139 1.13017E-31 296.37 224.78 296.37 1 S AAVSSKLLQARVMSSSNPDLAGTHSAADEEV X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP VMS(0.001)S(0.028)S(0.971)NPDLAGTHSAADEEVK VMS(-30.64)S(-15.41)S(15.41)NPDLAGT(-104.78)HS(-134.35)AADEEVK 5 3 -0.16422 43219 0 0 22340 0 0 45116 0 0 23766 0 0 33492 0 0 49841 0 0 39850 0 0 39655 0 0 23726 0 0 14999 0 0 40903 0 0 21112 0 0 45189 0 0 24735 0 0 34749 0 0 48695 0 0 39817 0 0 40624 0 0 24095 0 0 15042 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 116120000 116120000 0 0 NaN 2794 1520 904 904 5185 5524;5525 5886;5887 6542;6543 5887 6543 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13680 5887 6543 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13680 5887 6543 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13680 Q8NFC6 1531 Q8NFC6 Q8NFC6 Biorientation of chromosomes in cell division protein 1-like 1 BOD1L1 sp|Q8NFC6|BD1L1_HUMAN Biorientation of chromosomes in cell division protein 1-like 1 OS=Homo sapiens GN=BOD1L1 PE=1 SV=2 0.997264 25.6167 0.0154844 76.068 37.501 76.068 1 S SVATSTEGKDKDVTLSPVKAGPATTTSSETR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX DVT(0.003)LS(0.997)PVK DVT(-25.62)LS(25.62)PVK 5 2 0.16157 16747 0 0 15411 0 0 17393 0 0 14509 0 0 14694 0 0 16934 0 0 14544 0 0 15109 0 0 17912 0 0 11351 0 0 15850 0 0 14554 0 0 17443 0 0 14991 0 0 15072 0 0 16864 0 0 14904 0 0 15568 0 0 17531 0 0 11038 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12888000 12888000 0 0 NaN 2795 1521 1531 1531 843 891 947 1042 947 1042 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15655 947 1042 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15655 947 1042 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15655 Q8NFC6 800 Q8NFC6 Q8NFC6 Biorientation of chromosomes in cell division protein 1-like 1 BOD1L1 sp|Q8NFC6|BD1L1_HUMAN Biorientation of chromosomes in cell division protein 1-like 1 OS=Homo sapiens GN=BOD1L1 PE=1 SV=2 1 83.8618 0.00870911 83.862 33.739 83.862 1 S DKTERKSKHRNERKLSVLGKDGKPVSEYIIK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX KLS(1)VLGK KLS(83.86)VLGK 3 3 -0.82645 14634 0 0 4721.3 0 0 17250 0 0 3592.5 0 0 9370.8 0 0 16198 0 0 8258.2 0 0 8894.5 0 0 5065.1 0 0 1874.5 0 0 13857 0 0 4453.6 0 0 17121 0 0 3960.1 0 0 9956 0 0 15586 0 0 8372.2 0 0 9261.4 0 0 5133.2 0 0 1971 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11551000 11551000 0 0 NaN 2796 1521 800 800 2135 2256 2429 2706 2429 2706 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16256 2429 2706 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16256 2429 2706 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16256 Q8NFC6 1077 Q8NFC6 Q8NFC6 Biorientation of chromosomes in cell division protein 1-like 1 BOD1L1 sp|Q8NFC6|BD1L1_HUMAN Biorientation of chromosomes in cell division protein 1-like 1 OS=Homo sapiens GN=BOD1L1 PE=1 SV=2 0.988402 19.3055 0.000211948 113.4 84.096 113.4 1 S MEKKLSRRLCENRRGSLSQEMAKGEEKLAAN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX RGS(0.988)LS(0.012)QEMAK RGS(19.31)LS(-19.31)QEMAK 3 3 1.4291 10823 0 0 9151.4 0 0 11478 0 0 9567 0 0 12120 0 0 11867 0 0 10883 0 0 9709.5 0 0 9151.4 0 0 2356.6 0 0 10244 0 0 8647.3 0 0 11526 0 0 9834.7 0 0 12242 0 0 11770 0 0 11090 0 0 9893.9 0 0 9103.1 0 0 2443.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17632000 17632000 0 0 NaN 2797 1521 1077 1077 3255 3452 3688 4091 3688 4091 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10538 3688 4091 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10538 3688 4091 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10538 Q8NFC6 659 Q8NFC6 Q8NFC6 Biorientation of chromosomes in cell division protein 1-like 1 BOD1L1 sp|Q8NFC6|BD1L1_HUMAN Biorientation of chromosomes in cell division protein 1-like 1 OS=Homo sapiens GN=BOD1L1 PE=1 SV=2 0.487511 0 7.81401E-11 203.82 181.81 137.9 S NKNESKLEREHKRRTSTPVIMEGVQEETDTR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RT(0.488)S(0.488)T(0.025)PVIMEGVQEETDTR RT(0)S(0)T(-12.9)PVIMEGVQEET(-120.95)DT(-128.15)R 3 3 0.78926 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2798 1521 659 659 3540 3757;3758 4003 4443 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11088 4004 4444 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14886 4004 4444 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14886 Q8NFC6 3019 Q8NFC6 Q8NFC6 Biorientation of chromosomes in cell division protein 1-like 1 BOD1L1 sp|Q8NFC6|BD1L1_HUMAN Biorientation of chromosomes in cell division protein 1-like 1 OS=Homo sapiens GN=BOD1L1 PE=1 SV=2 0.997834 26.754 3.19518E-05 140.78 92.689 110.92 1 S RSTTRSEAQRSKTQLSPSIKRKREVSPPGAR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX TQLS(0.998)PS(0.002)IKR T(-42.25)QLS(26.75)PS(-26.75)IKR 4 3 0.34777 54693 0 0 47024 0 0 59891 0 0 47162 0 0 44971 0 0 54857 0 0 50940 0 0 53036 0 0 44517 0 0 16057 0 0 51773 0 0 44423 0 0 59836 0 0 48540 0 0 46596 0 0 54650 0 0 51390 0 0 53754 0 0 44198 0 0 16347 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 90758000 90758000 0 0 NaN 2799 1521 3019 3019 4872;4873 5197;5198 5536;5537 6154;6155 5537 6155 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10880 5536 6154 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13502 5536 6154 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13502 Q8NFD5 1555 Q8NFD5 Q8NFD5 AT-rich interactive domain-containing protein 1B ARID1B sp|Q8NFD5|ARI1B_HUMAN AT-rich interactive domain-containing protein 1B OS=Homo sapiens GN=ARID1B PE=1 SV=2 0.995445 23.6089 0.00219248 98.227 81.8 98.227 1 S APSPASFQRSLENRMSPSKSPFLPSMKMQKV X;X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPXXXX MS(0.995)PS(0.004)KSPFLPSMK MS(23.61)PS(-23.61)KS(-36.58)PFLPS(-75.38)MK 2 3 0.20386 14607 0 0 10638 0 0 15992 0 0 10619 0 0 12599 0 0 14941 0 0 12041 0 0 12603 0 0 10427 0 0 8782.8 0 0 13827 0 0 10049 0 0 15981 0 0 10974 0 0 12977 0 0 14771 0 0 12240 0 0 12997 0 0 10357 0 0 8561.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20338000 20338000 0 0 NaN 2800 1522 1555 1555 2748 2915 3125 3472 3125 3472 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17958 3125 3472 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17958 3125 3472 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17958 Q8NFH5 259 Q8NFH5 Q8NFH5 Nucleoporin NUP53 NUP35 sp|Q8NFH5|NUP53_HUMAN Nucleoporin NUP53 OS=Homo sapiens GN=NUP35 PE=1 SV=1 0.904415 10.1779 3.11304E-08 174.59 154.13 174.59 1 S IDKSVMESSDRCALSSPSLAFTPPIKTLGTP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXXPPPPPPPPPPPPPPPXXXXX CALS(0.087)S(0.904)PS(0.009)LAFTPPIK CALS(-10.18)S(10.18)PS(-20.13)LAFT(-120.06)PPIK 5 3 -0.22584 3208.6 0 0 5333.7 0 0 4284.4 0 0 4549.8 0 0 5832.8 0 0 4113.1 0 0 4484.9 0 0 5180.4 0 0 5747.5 0 0 7377.7 0 0 3040.2 0 0 5034.1 0 0 4268.8 0 0 4712.4 0 0 5809.9 0 0 4169.5 0 0 4664.6 0 0 5377.2 0 0 5617.5 0 0 7066.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9647100 9647100 0 0 NaN 2801 1523 259 259 595 634 676 751 676 751 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22106 676 751 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22106 676 751 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22106 Q8NFH5 73 Q8NFH5 Q8NFH5 Nucleoporin NUP53 NUP35 sp|Q8NFH5|NUP53_HUMAN Nucleoporin NUP53 OS=Homo sapiens GN=NUP35 PE=1 SV=1 0.99798 26.9376 0.00157158 97.253 71.933 97.253 1 S SVGVMEMRSPLLAGGSPPQPVVPAHKDKSGA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPXXXXX S(0.002)PLLAGGS(0.998)PPQPVVPAHK S(-26.94)PLLAGGS(26.94)PPQPVVPAHK 8 3 1.926 22273 0 0 28854 0 0 21277 0 0 27708 0 0 16554 0 0 23080 0 0 14616 0 0 23427 0 0 34045 0 0 24583 0 0 21072 0 0 27251 0 0 21420 0 0 28445 0 0 17069 0 0 23391 0 0 15503 0 0 24226 0 0 32768 0 0 23690 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 36347000 36347000 0 0 NaN 2802 1523 73 73 4128 4401 4692 5208 4692 5208 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16768 4692 5208 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16768 4692 5208 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16768 Q8NG31 1845 Q8NG31 Q8NG31 Protein CASC5 CASC5 sp|Q8NG31|CASC5_HUMAN Protein CASC5 OS=Homo sapiens GN=CASC5 PE=1 SV=3 0.446318 0 0.00665492 89.506 63.071 89.506 S KSANSVLIKNLSRTPSSCSSSLDSIKADGTS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T(0.446)PS(0.446)S(0.107)CSSSLDSIK T(0)PS(0)S(-6.21)CS(-31.72)S(-34.81)S(-33.36)LDS(-77.34)IK 3 3 -0.18883 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2803 1524 1845 1845 4855 5180 5519 6137 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14434 5519 6137 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14434 5519 6137 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14434 Q8NHG8 135 Q8NHG8 Q8NHG8 E3 ubiquitin-protein ligase ZNRF2 ZNRF2 sp|Q8NHG8|ZNRF2_HUMAN E3 ubiquitin-protein ligase ZNRF2 OS=Homo sapiens GN=ZNRF2 PE=1 SV=1 1 106.757 0.000196669 106.76 62.118 106.76 1 S SPEDGGGGRDRPVGGSPGGPRLVIGSLPAHL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX DRPVGGS(1)PGGPR DRPVGGS(106.76)PGGPR 7 2 -0.74724 8876.6 0 0 5347.9 0 0 9077.4 0 0 5793 0 0 5327.8 0 0 10187 0 0 4953.6 0 0 6464.9 0 0 6453.6 0 0 1788.1 0 0 8400.2 0 0 5054.5 0 0 9082.3 0 0 5991.5 0 0 5624.2 0 0 9971.3 0 0 5101.4 0 0 6682.8 0 0 6304.2 0 0 1833.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20011000 20011000 0 0 NaN 2804 1525 135 135 791 839 895 986 895 986 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5927 895 986 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5927 895 986 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5927 Q8NHG8 82 Q8NHG8 Q8NHG8 E3 ubiquitin-protein ligase ZNRF2 ZNRF2 sp|Q8NHG8|ZNRF2_HUMAN E3 ubiquitin-protein ligase ZNRF2 OS=Homo sapiens GN=ZNRF2 PE=1 SV=1 1 80.4133 2.10329E-07 162.98 142.87 155.03 1 S AAAAAPAAPAAPRSRSLGGAVGSVASGARAA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX S(1)LGGAVGSVASGAR S(80.41)LGGAVGS(-80.41)VAS(-120.43)GAR 1 2 0.75734 32649 0 0 26430 0 0 34261 0 0 27560 0 0 27829 0 0 38679 0 0 26596 0 0 29672 0 0 27804 0 0 14498 0 0 30900 0 0 24974 0 0 34325 0 0 28408 0 0 28604 0 0 38188 0 0 27165 0 0 30549 0 0 27383 0 0 14338 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 43670000 43670000 0 0 NaN 2805 1525 82 82 3935;4284 4194;4566 4476;4866 4975;5400 4476 4975 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14395 4866 5400 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11445 4866 5400 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11445 Q8NHM5 1031 Q8NHM5 Q8NHM5 Lysine-specific demethylase 2B KDM2B sp|Q8NHM5|KDM2B_HUMAN Lysine-specific demethylase 2B OS=Homo sapiens GN=KDM2B PE=1 SV=1 0.987429 18.9574 0.00379248 90.654 60.216 90.654 1 S LRSPPRVISRPPPSVSPPKCIQMERHVIRPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX VISRPPPS(0.013)VS(0.987)PPK VIS(-47.63)RPPPS(-18.96)VS(18.96)PPK 10 3 -0.015116 35865 0 0 35667 0 0 35007 0 0 37229 0 0 32120 0 0 33620 0 0 33444 0 0 37262 0 0 35612 0 0 18245 0 0 33934 0 0 33702 0 0 35267 0 0 38072 0 0 32786 0 0 33940 0 0 34039 0 0 37786 0 0 35046 0 0 18043 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 66674000 66674000 0 0 NaN 2806 1527 1031 1031 5140 5477 5834 6485;6486 5834 6485 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13158 5834 6485 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13158 5834 6485 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13158 Q8NHZ8 82 Q8NHZ8 Q8NHZ8 Anaphase-promoting complex subunit CDC26 CDC26 sp|Q8NHZ8|CDC26_HUMAN Anaphase-promoting complex subunit CDC26 OS=Homo sapiens GN=CDC26 PE=1 SV=1 1 90.4051 6.70472E-07 173.24 168.08 173.24 1 S YKPQPKPNNRSSQFGSLEF____________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX SSQFGS(1)LEF S(-90.41)S(-90.41)QFGS(90.41)LEF 6 2 -0.19791 3166.1 0 0 2355.2 0 0 2190.3 0 0 3673 0 0 3718.8 0 0 2317 0 0 3087.8 0 0 3537.6 0 0 3024.4 0 0 7591.9 0 0 2992.3 0 0 2232.4 0 0 2279.1 0 0 3669.1 0 0 3674.6 0 0 2412.6 0 0 3171.7 0 0 3729.9 0 0 2986.9 0 0 7230.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 48344000 48344000 0 0 NaN 2807 1529 82 82 4406 4694 4998 5545 4998 5545 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22252 4998 5545 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22252 4998 5545 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22252 Q8NI27 1364 Q8NI27 Q8NI27 THO complex subunit 2 THOC2 sp|Q8NI27|THOC2_HUMAN THO complex subunit 2 OS=Homo sapiens GN=THOC2 PE=1 SV=2 1 54.6997 0.0399046 54.7 23.269 54.7 1 S AESKSTQEREREKEPSRERDIAKEMKSKENV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX EKEPS(1)RER EKEPS(54.7)RER 5 3 -0.044229 7043.5 0 0 8869.4 0 0 6423.4 0 0 7888.3 0 0 7768.1 0 0 6134 0 0 7840.5 0 0 8153.8 0 0 8540.2 0 0 2177.9 0 0 6662.6 0 0 8373 0 0 6520.2 0 0 8131.2 0 0 7805.3 0 0 6256.1 0 0 7996.7 0 0 8166.2 0 0 8396.9 0 0 2239.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 49032000 49032000 0 0 NaN 2808 1530 1364 1364 1012 1068 1155 1273 1155 1273 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5160 1155 1273 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5160 1155 1273 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5160 Q8NI27 1393 Q8NI27 Q8NI27 THO complex subunit 2 THOC2 sp|Q8NI27|THOC2_HUMAN THO complex subunit 2 OS=Homo sapiens GN=THOC2 PE=1 SV=2 0.999894 43.5725 0.00705958 81.01 62.279 81.01 1 S NVKGGEKTPVSGSLKSPVPRSDIPEPEREQK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPXXXXXXXXXXX TPVSGSLKS(1)PVPR T(-46.16)PVS(-43.57)GS(-44.24)LKS(43.57)PVPR 9 3 0.44567 13566 0 0 25221 0 0 17342 0 0 22985 0 0 15885 0 0 16683 0 0 18371 0 0 18573 0 0 26111 0 0 8916.9 0 0 12851 0 0 23813 0 0 17232 0 0 23636 0 0 16249 0 0 17044 0 0 18793 0 0 18826 0 0 25435 0 0 8826.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 141310000 141310000 0 0 NaN 2809 1530 1393 1393 4866 5191 5530 6148 5530 6148 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13007 5530 6148 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13007 5530 6148 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13007 Q8TAD8 74 Q8TAD8 Q8TAD8 Smad nuclear-interacting protein 1 SNIP1 sp|Q8TAD8|SNIP1_HUMAN Smad nuclear-interacting protein 1 OS=Homo sapiens GN=SNIP1 PE=1 SV=1 1 55.4522 0.0270847 55.452 31.198 55.452 2 S EPARSGHRGNRARGVSRSPPKKKNKASGRRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX GVS(1)RS(1)PPK GVS(55.45)RS(55.45)PPK 3 3 1.2779 0 17638 0 0 18529 0 0 14868 0 0 17554 0 0 17426 0 0 17642 0 0 15085 0 0 15287 0 0 19320 0 0 3809.2 0 0 16680 0 0 17498 0 0 15157 0 0 18085 0 0 17504 0 0 17657 0 0 15584 0 0 15540 0 0 18883 0 0 3940.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 47764000 0 47764000 0 NaN 2810 1531 74 74 1677 1769 1911 2129 1911 2129 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7549 1911 2129 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7549 1911 2129 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7549 Q8TAD8 76 Q8TAD8 Q8TAD8 Smad nuclear-interacting protein 1 SNIP1 sp|Q8TAD8|SNIP1_HUMAN Smad nuclear-interacting protein 1 OS=Homo sapiens GN=SNIP1 PE=1 SV=1 1 55.4522 0.0270847 55.452 31.198 55.452 2 S ARSGHRGNRARGVSRSPPKKKNKASGRRSKS X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX GVS(1)RS(1)PPK GVS(55.45)RS(55.45)PPK 5 3 1.2779 0 17638 0 0 18529 0 0 14868 0 0 17554 0 0 17426 0 0 17642 0 0 15085 0 0 15287 0 0 19320 0 0 3809.2 0 0 16680 0 0 17498 0 0 15157 0 0 18085 0 0 17504 0 0 17657 0 0 15584 0 0 15540 0 0 18883 0 0 3940.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 47764000 0 47764000 0 NaN 2811 1531 76 76 1677 1769 1911 2129 1911 2129 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7549 1911 2129 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7549 1911 2129 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7549 Q8TAD8 35 Q8TAD8 Q8TAD8 Smad nuclear-interacting protein 1 SNIP1 sp|Q8TAD8|SNIP1_HUMAN Smad nuclear-interacting protein 1 OS=Homo sapiens GN=SNIP1 PE=1 SV=1 1 70.5552 0.00017527 101.53 76.741 70.555 1 S DVVLPAGVVVKQERLSPEVAPPAHRRPDHSG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPXXXXXX QERLS(1)PEVAPPAHR QERLS(70.56)PEVAPPAHR 5 3 1.2191 30391 0 0 27140 0 0 35369 0 0 28080 0 0 36616 0 0 34863 0 0 37774 0 0 36768 0 0 34776 0 0 7510 0 0 28776 0 0 25644 0 0 35346 0 0 28884 0 0 37098 0 0 34680 0 0 38313 0 0 37033 0 0 34441 0 0 7922.5 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 104700000 104700000 0 0 NaN 2812 1531 35 35 2570;3022 2714;3203 2912;3426 3246;3799 3426 3799 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8754 2912 3246 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10857 2912 3246 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10857 Q8TAD8 52 Q8TAD8 Q8TAD8 Smad nuclear-interacting protein 1 SNIP1 sp|Q8TAD8|SNIP1_HUMAN Smad nuclear-interacting protein 1 OS=Homo sapiens GN=SNIP1 PE=1 SV=1 0.98698 19.4478 3.34246E-05 123.29 105.15 123.29 1;2 S EVAPPAHRRPDHSGGSPSPPTSEPARSGHRG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPXXXXX RPDHS(0.011)GGS(0.987)PS(0.002)PPTSEPAR RPDHS(-19.45)GGS(19.45)PS(-27.36)PPT(-76.24)S(-80.48)EPAR 8 3 0.71907 1041.1 1937.9 0 2445.8 2334.2 0 2038.5 2072.5 0 1741.7 1881.2 0 1432.2 1462 0 2618.7 1612.6 0 2256.7 2755.5 0 1688.7 2901.2 0 1900 2462.9 0 1666.3 1926.5 0 988.93 1834.3 0 2306.4 2202.4 0 1989.5 2074.1 0 1845.4 1954.8 0 1500.5 1537.7 0 2577.1 1648.1 0 2247.8 2734.8 0 1780.2 2918.2 0 1889.8 2442.6 0 1608.1 1881.2 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 26600000 15865000 10735000 0 NaN 2813 1531 52 52 3381 3589;3590 3829;3830 4252;4253 3829 4252 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5585 3829 4252 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5585 3829 4252 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5585 Q8TAD8 54 Q8TAD8 Q8TAD8 Smad nuclear-interacting protein 1 SNIP1 sp|Q8TAD8|SNIP1_HUMAN Smad nuclear-interacting protein 1 OS=Homo sapiens GN=SNIP1 PE=1 SV=1 0.959823 14.7954 0.00791969 77.576 58.023 77.576 2 S APPAHRRPDHSGGSPSPPTSEPARSGHRGNR X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPXXXXXXX RPDHS(0.012)GGS(0.986)PS(0.96)PPT(0.033)S(0.008)EPAR RPDHS(-19.2)GGS(19.2)PS(14.8)PPT(-14.8)S(-20.9)EPAR 10 3 0.22468 0 1937.9 0 0 2334.2 0 0 2072.5 0 0 1881.2 0 0 1462 0 0 1612.6 0 0 2755.5 0 0 2901.2 0 0 2462.9 0 0 1926.5 0 0 1834.3 0 0 2202.4 0 0 2074.1 0 0 1954.8 0 0 1537.7 0 0 1648.1 0 0 2734.8 0 0 2918.2 0 0 2442.6 0 0 1881.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 10735000 0 10735000 0 NaN 2814 1531 54 54 3381 3589;3590 3830 4253 3830 4253 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5837 3830 4253 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5837 3830 4253 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5837 Q8TAP8 52 Q8TAP8 Q8TAP8 Protein phosphatase 1 regulatory subunit 35 PPP1R35 sp|Q8TAP8|PPR35_HUMAN Protein phosphatase 1 regulatory subunit 35 OS=Homo sapiens GN=PPP1R35 PE=1 SV=1 0.999971 45.3441 4.66827E-24 277.79 256.22 277.79 1 S VPEPGLDLSLSPRPDSPQPRHGSPGRRKGRA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX APVPEPGLDLSLSPRPDS(1)PQPR APVPEPGLDLS(-91.83)LS(-45.34)PRPDS(45.34)PQPR 18 3 1.4421 5587.3 0 0 12633 0 0 7132.5 0 0 12856 0 0 7183.4 0 0 6746.6 0 0 7824.8 0 0 9288.8 0 0 12870 0 0 11294 0 0 5292.8 0 0 11935 0 0 7095 0 0 13089 0 0 7300.6 0 0 7088.3 0 0 8072.4 0 0 9559.2 0 0 12485 0 0 10849 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 70265000 70265000 0 0 NaN 2815 1532 52 52 383 410 445 494 445 494 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18834 445 494 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18834 445 494 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18834 Q8TAP8 87 Q8TAP8 Q8TAP8 Protein phosphatase 1 regulatory subunit 35 PPP1R35 sp|Q8TAP8|PPR35_HUMAN Protein phosphatase 1 regulatory subunit 35 OS=Homo sapiens GN=PPP1R35 PE=1 SV=1 0.743859 4.63011 0.020918 66.19 36.814 66.19 1 S AARQRRQVRFRLTPPSPVRSEPQPAVPQELE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX LT(0.256)PPS(0.744)PVR LT(-4.63)PPS(4.63)PVR 5 2 0.86942 18991 0 0 28142 0 0 19764 0 0 28109 0 0 16313 0 0 19007 0 0 18759 0 0 21103 0 0 30597 0 0 6693.8 0 0 17973 0 0 26585 0 0 19820 0 0 28717 0 0 16804 0 0 19497 0 0 19302 0 0 21288 0 0 29688 0 0 6791.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 31643000 31643000 0 0 NaN 2816 1532 87 87 2629 2776 2977 3314 2977 3314 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13063 2977 3314 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13063 2977 3314 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13063 Q8TAP9 40 Q8TAP9 Q8TAP9 M-phase-specific PLK1-interacting protein MPLKIP sp|Q8TAP9|MPLKI_HUMAN M-phase-specific PLK1-interacting protein OS=Homo sapiens GN=MPLKIP PE=1 SV=1 0.999665 34.7475 0.0437446 43.794 13.736 43.794 1 S SSFRGTPGGGGPRPPSPRDGYGSPHHTPPYG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPXXXXXXXXXXXXX GTPGGGGPRPPS(1)PR GT(-34.75)PGGGGPRPPS(34.75)PR 12 3 2.5269 12738 0 0 12447 0 0 11060 0 0 13238 0 0 18503 0 0 11937 0 0 19253 0 0 17116 0 0 13453 0 0 2236 0 0 12048 0 0 11763 0 0 11326 0 0 13524 0 0 18343 0 0 12092 0 0 19403 0 0 17035 0 0 13520 0 0 2501.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14413000 14413000 0 0 NaN 2817 1533 40 40 1658 1749 1891 2109 1891 2109 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6879 1891 2109 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6879 1891 2109 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6879 Q8TAQ2 347 Q8TAQ2 Q8TAQ2 SWI/SNF complex subunit SMARCC2 SMARCC2 sp|Q8TAQ2|SMRC2_HUMAN SWI/SNF complex subunit SMARCC2 OS=Homo sapiens GN=SMARCC2 PE=1 SV=1 1 82.4531 4.45586E-05 114.84 94.215 114.84 1 S REEEQEDLTKDMDEPSPVPNVEEVTLPKTVN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPXXX DMDEPS(1)PVPNVEEVTLPK DMDEPS(82.45)PVPNVEEVT(-82.45)LPK 6 3 3.0447 9703.5 0 0 11314 0 0 9676.1 0 0 14800 0 0 12344 0 0 8409.1 0 0 11533 0 0 13219 0 0 13016 0 0 66991 0 0 9181.9 0 0 10708 0 0 9776 0 0 14880 0 0 12359 0 0 8900.5 0 0 11819 0 0 15092 0 0 12780 0 0 63386 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17870000 17870000 0 0 NaN 2818 1534 347 347 755 799 850 938 850 938 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20429 850 938 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20429 850 938 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20429 Q8TAQ2 302 Q8TAQ2 Q8TAQ2 SWI/SNF complex subunit SMARCC2 SMARCC2 sp|Q8TAQ2|SMRC2_HUMAN SWI/SNF complex subunit SMARCC2 OS=Homo sapiens GN=SMARCC2 PE=1 SV=1 0.984628 18.5041 0.000154799 110.77 80.876 110.77 2 S DRRDKKGGNYKKRKRSPSPSPTPEAKKKNAK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX KRS(0.985)PS(0.97)PS(0.04)PT(0.006)PEAK KRS(18.5)PS(15.56)PS(-15.56)PT(-23.97)PEAK 3 3 0.25196 0 94378 0 0 97043 0 0 90115 0 0 97831 0 0 109090 0 0 94277 0 0 114980 0 0 112770 0 0 111080 0 0 23134 0 0 89289 0 0 91677 0 0 91229 0 0 100340 0 0 109660 0 0 94932 0 0 116650 0 0 113100 0 0 109770 0 0 24393 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 116970000 0 116970000 0 NaN 2819 1534 302 302 2203 2329 2510 2801;2802 2510 2801 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8102 2510 2801 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8102 2510 2801 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8102 Q8TAQ2 304 Q8TAQ2 Q8TAQ2 SWI/SNF complex subunit SMARCC2 SMARCC2 sp|Q8TAQ2|SMRC2_HUMAN SWI/SNF complex subunit SMARCC2 OS=Homo sapiens GN=SMARCC2 PE=1 SV=1 0.969659 15.5629 0.000154799 110.77 80.876 110.77 2 S RDKKGGNYKKRKRSPSPSPTPEAKKKNAKKG X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPXXXXXXX KRS(0.985)PS(0.97)PS(0.04)PT(0.006)PEAK KRS(18.5)PS(15.56)PS(-15.56)PT(-23.97)PEAK 5 3 0.25196 0 94378 0 0 97043 0 0 90115 0 0 97831 0 0 109090 0 0 94277 0 0 114980 0 0 112770 0 0 111080 0 0 23134 0 0 89289 0 0 91677 0 0 91229 0 0 100340 0 0 109660 0 0 94932 0 0 116650 0 0 113100 0 0 109770 0 0 24393 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 116970000 0 116970000 0 NaN 2820 1534 304 304 2203 2329 2510 2801;2802 2510 2801 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8102 2510 2801 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8102 2510 2801 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8102 Q8TAQ2 283 Q8TAQ2 Q8TAQ2 SWI/SNF complex subunit SMARCC2 SMARCC2 sp|Q8TAQ2|SMRC2_HUMAN SWI/SNF complex subunit SMARCC2 OS=Homo sapiens GN=SMARCC2 PE=1 SV=1 0.999909 40.4585 5.12709E-05 130.02 99.472 130.02 1 S RRKKISAKTLTDEVNSPDSDRRDKKGGNYKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPXXXXXXXXX TLTDEVNS(1)PDSDRR T(-65.56)LT(-59.07)DEVNS(40.46)PDS(-40.46)DRR 8 3 -0.059033 13839 0 0 17272 0 0 14007 0 0 17647 0 0 16618 0 0 14146 0 0 16252 0 0 15875 0 0 17026 0 0 3717 0 0 13096 0 0 16319 0 0 14126 0 0 18040 0 0 16706 0 0 14364 0 0 16582 0 0 15968 0 0 16766 0 0 3867.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 68103000 68103000 0 0 NaN 2821 1534 283 283 4795 5115 5454 6070 5454 6070 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9139 5454 6070 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9139 5454 6070 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9139 Q8TB61 427 Q8TB61 Q8TB61 Adenosine 3'-phospho 5'-phosphosulfate transporter 1 SLC35B2 sp|Q8TB61|S35B2_HUMAN Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Homo sapiens GN=SLC35B2 PE=1 SV=1 1 126.319 6.82115E-05 126.32 97.343 126.32 1 S RGRLKQRGKKAVPVESPVQKV__________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX AVPVES(1)PVQKV AVPVES(126.32)PVQKV 6 3 0.62796 8161.6 0 0 4937.7 0 0 9041.2 0 0 5684.7 0 0 4428.9 0 0 7632.8 0 0 3989.7 0 0 6231.1 0 0 5304 0 0 2174.4 0 0 7726.3 0 0 4668.7 0 0 8996.1 0 0 5822.6 0 0 4761.8 0 0 7550.3 0 0 4118.3 0 0 6370.1 0 0 5177.8 0 0 2191.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18592000 18592000 0 0 NaN 2822 1536 427 427 562 599 640 715 640 715 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15412 640 715 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15412 640 715 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15412 Q8TB72 136 Q8TB72 Q8TB72 Pumilio homolog 2 PUM2 sp|Q8TB72|PUM2_HUMAN Pumilio homolog 2 OS=Homo sapiens GN=PUM2 PE=1 SV=2 1 176.251 1.19817E-10 176.25 164.2 176.25 1 S AETDGPEKGDQKGKASPFEEDQNRDLKQGDD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX GKAS(1)PFEEDQNR GKAS(176.25)PFEEDQNR 4 2 -0.16724 17336 0 0 12120 0 0 15950 0 0 11986 0 0 14241 0 0 15844 0 0 14066 0 0 12984 0 0 13322 0 0 4842.5 0 0 16399 0 0 11449 0 0 16119 0 0 12377 0 0 14550 0 0 15682 0 0 14306 0 0 13280 0 0 13176 0 0 4860.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13220000 13220000 0 0 NaN 2823 1537 136 136 1482 1560 1685 1865 1685 1865 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9647 1685 1865 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9647 1685 1865 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9647 Q8TB72 182 Q8TB72 Q8TB72 Pumilio homolog 2 PUM2 sp|Q8TB72|PUM2_HUMAN Pumilio homolog 2 OS=Homo sapiens GN=PUM2 PE=1 SV=2 0.591041 1.59938 1.19663E-06 164.93 99.752 164.93 1 S ADCKDFNRTPGSRQASPTEVVERLGPNTNPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX QAS(0.591)PT(0.409)EVVER QAS(1.6)PT(-1.6)EVVER 3 2 0.29453 32513 0 0 22357 0 0 29248 0 0 23918 0 0 32959 0 0 30547 0 0 32918 0 0 29248 0 0 24759 0 0 10656 0 0 30753 0 0 21129 0 0 29684 0 0 24570 0 0 33219 0 0 30326 0 0 33286 0 0 29710 0 0 24775 0 0 10711 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 89784000 89784000 0 0 NaN 2824 1537 182 182 3000 3180 3403 3773 3403 3773 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9400 3403 3773 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9400 3403 3773 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9400 Q8TBN0 179 Q8TBN0 Q8TBN0 Guanine nucleotide exchange factor for Rab-3A RAB3IL1 sp|Q8TBN0|R3GEF_HUMAN Guanine nucleotide exchange factor for Rab-3A OS=Homo sapiens GN=RAB3IL1 PE=1 SV=1 0.997806 26.5778 5.8033E-07 150.34 128.78 150.34 1 S STPASPNRELHPQLLSPTKAGPRKGHSRHKS X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX ELHPQLLS(0.998)PT(0.002)K ELHPQLLS(26.58)PT(-26.58)K 8 3 0.25228 4115.1 0 0 15910 0 0 4147 0 0 20391 0 0 3921.5 0 0 3826.5 0 0 3934.9 0 0 9098.1 0 0 19403 0 0 4098.2 0 0 3894.1 0 0 15055 0 0 4171.2 0 0 20398 0 0 4007.6 0 0 4648.6 0 0 4428.3 0 0 9045.2 0 0 18489 0 0 4069.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 44048000 44048000 0 0 NaN 2825 1538 179 179 1033 1089 1177 1296 1177 1296 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15673 1177 1296 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15673 1177 1296 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15673 Q8TBN0 168 Q8TBN0 Q8TBN0 Guanine nucleotide exchange factor for Rab-3A RAB3IL1 sp|Q8TBN0|R3GEF_HUMAN Guanine nucleotide exchange factor for Rab-3A OS=Homo sapiens GN=RAB3IL1 PE=1 SV=1 0.999902 40.1469 5.76447E-16 234.28 197.43 234.28 1 S EVTALKTLVITSTPASPNRELHPQLLSPTKA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX TLVITSTPAS(1)PNR T(-124.13)LVIT(-79.42)S(-59.91)T(-40.15)PAS(40.15)PNR 10 2 0.43764 9312.2 0 0 25067 0 0 7373.7 0 0 28458 0 0 16405 0 0 7683.5 0 0 16641 0 0 18797 0 0 29599 0 0 23170 0 0 8804.5 0 0 23699 0 0 7647.4 0 0 28679 0 0 16130 0 0 8811.8 0 0 17282 0 0 19122 0 0 28655 0 0 22253 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22171000 22171000 0 0 NaN 2826 1538 168 168 4798 5118 5457 6073 5457 6073 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14741 5457 6073 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14741 5457 6073 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14741 Q8TBZ3 491 Q8TBZ3 Q8TBZ3 WD repeat-containing protein 20 WDR20 sp|Q8TBZ3|WDR20_HUMAN WD repeat-containing protein 20 OS=Homo sapiens GN=WDR20 PE=1 SV=2 0.972587 15.4998 0.000189645 112.17 77.285 112.17 1 S KDHKRNHSMGHISSKSSDKLNLVTKTKTDPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPXXXXXX S(0.973)S(0.027)DKLNLVTK S(15.5)S(-15.5)DKLNLVT(-89.83)K 1 3 0.08214 12232 0 0 14189 0 0 11211 0 0 15243 0 0 10878 0 0 11618 0 0 12236 0 0 13658 0 0 16573 0 0 4734.5 0 0 11571 0 0 13410 0 0 11346 0 0 15528 0 0 11082 0 0 11842 0 0 12509 0 0 13763 0 0 16168 0 0 4774.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37251000 37251000 0 0 NaN 2827 1539 491 491 4330 4616 4918 5462 4918 5462 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15823 4918 5462 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15823 4918 5462 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15823 Q8TC05 242 Q8TC05 Q8TC05 Nuclear protein MDM1 MDM1 sp|Q8TC05|MDM1_HUMAN Nuclear protein MDM1 OS=Homo sapiens GN=MDM1 PE=1 SV=2 1 61.0296 0.0151514 61.03 37.657 61.03 1 S SVIHETEYKRNFKGLSPVKEPKLRNDLRENR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX GLS(1)PVKEPK GLS(61.03)PVKEPK 3 3 0.045979 17074 0 0 12982 0 0 18095 0 0 13303 0 0 14202 0 0 16802 0 0 14388 0 0 14616 0 0 13363 0 0 2482.3 0 0 16161 0 0 12266 0 0 18115 0 0 13696 0 0 14643 0 0 16663 0 0 14608 0 0 14820 0 0 13229 0 0 2675.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11072000 11072000 0 0 NaN 2828 1540 242 242 1515 1595 1724 1916 1724 1916 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12628 1724 1916 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12628 1724 1916 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12628 Q8TC07 70 Q8TC07 Q8TC07 TBC1 domain family member 15 TBC1D15 sp|Q8TC07|TBC15_HUMAN TBC1 domain family member 15 OS=Homo sapiens GN=TBC1D15 PE=1 SV=2 0.867353 9.38488 1.21716E-10 194.18 152.63 194.18 1 S DDALDSSSILYARKDSSSVVEWTQAPKERGH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX KDS(0.867)S(0.033)S(0.1)VVEWTQAPK KDS(9.38)S(-14.23)S(-9.38)VVEWT(-72.91)QAPK 3 3 -0.29038 11543 0 0 10169 0 0 11006 0 0 9338.7 0 0 14407 0 0 11540 0 0 16362 0 0 12824 0 0 10790 0 0 14881 0 0 10921 0 0 9602 0 0 11159 0 0 9674.8 0 0 14442 0 0 11513 0 0 16409 0 0 13262 0 0 10882 0 0 14309 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17011000 17011000 0 0 NaN 2829 1541 70 70 2035 2153 2320 2587 2320 2587 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16059 2320 2587 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16059 2320 2587 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16059 Q8TC07 675 Q8TC07 Q8TC07 TBC1 domain family member 15 TBC1D15 sp|Q8TC07|TBC15_HUMAN TBC1 domain family member 15 OS=Homo sapiens GN=TBC1D15 PE=1 SV=2 0.996666 24.7563 1.76407E-11 211.33 172.54 211.33 1 S SNALPTLSASGARNDSPTQIPVSSDVCRLTP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX NDS(0.997)PT(0.003)QIPVSSDVCR NDS(24.76)PT(-24.76)QIPVS(-101.51)S(-105.15)DVCR 3 2 0.19226 14907 0 0 14403 0 0 14638 0 0 14520 0 0 12011 0 0 14746 0 0 12366 0 0 14357 0 0 15508 0 0 13794 0 0 14105 0 0 13607 0 0 14724 0 0 14905 0 0 12352 0 0 14792 0 0 12656 0 0 14832 0 0 15168 0 0 13321 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23622000 23622000 0 0 NaN 2830 1541 675 675 2794 2963 3175 3526 3175 3526 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12469 3175 3526 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12469 3175 3526 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12469 Q8TC12 167 Q8TC12 Q8TC12 Retinol dehydrogenase 11 RDH11 sp|Q8TC12|RDH11_HUMAN Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2 1 51.0919 0.0421663 51.092 21.793 51.092 2 S GHFLLTHLLLEKLKESAPSRIVNVSSLAHHL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX LKES(1)APS(1)R LKES(51.09)APS(51.09)R 4 2 2.0747 0 30484 0 0 27031 0 0 27752 0 0 32281 0 0 26189 0 0 26440 0 0 20657 0 0 23931 0 0 30084 0 0 9660.8 0 0 28835 0 0 25565 0 0 28073 0 0 32730 0 0 26600 0 0 26750 0 0 21551 0 0 24393 0 0 29284 0 0 9650.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 76219000 0 76219000 0 NaN 2831 1542 167 167 2416 2553 2746 3067 2746 3067 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9757 2746 3067 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9757 2746 3067 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9757 Q8TC12 170 Q8TC12 Q8TC12 Retinol dehydrogenase 11 RDH11 sp|Q8TC12|RDH11_HUMAN Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2 1 51.0919 0.0421663 51.092 21.793 51.092 2 S LLTHLLLEKLKESAPSRIVNVSSLAHHLGRI X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPXXXXXXXXXXXXXX LKES(1)APS(1)R LKES(51.09)APS(51.09)R 7 2 2.0747 0 30484 0 0 27031 0 0 27752 0 0 32281 0 0 26189 0 0 26440 0 0 20657 0 0 23931 0 0 30084 0 0 9660.8 0 0 28835 0 0 25565 0 0 28073 0 0 32730 0 0 26600 0 0 26750 0 0 21551 0 0 24393 0 0 29284 0 0 9650.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 76219000 0 76219000 0 NaN 2832 1542 170 170 2416 2553 2746 3067 2746 3067 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9757 2746 3067 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9757 2746 3067 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9757 Q8TCJ2 498 Q8TCJ2 Q8TCJ2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B STT3B sp|Q8TCJ2|STT3B_HUMAN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS=Homo sapiens GN=STT3B PE=1 SV=1 0.751195 4.79893 2.44171E-07 166.27 149.9 166.27 1 S YLGDDMKRENPPVEDSSDEDDKRNQGNLYDK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPXXXXXXXX ENPPVEDS(0.751)S(0.249)DEDDKR ENPPVEDS(4.8)S(-4.8)DEDDKR 8 3 0.7207 11861 0 0 8026.1 0 0 11626 0 0 9217.9 0 0 9337.6 0 0 11098 0 0 10099 0 0 9661.6 0 0 9219.6 0 0 5397.5 0 0 11222 0 0 7588.8 0 0 11694 0 0 9422.1 0 0 9620.9 0 0 11032 0 0 10219 0 0 9909.6 0 0 9134.2 0 0 5306 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8347300 8347300 0 0 NaN 2833 1543 498 498 1074 1132 1220 1342 1220 1342 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8056 1220 1342 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8056 1220 1342 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8056 Q8TCJ2 29 Q8TCJ2 Q8TCJ2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B STT3B sp|Q8TCJ2|STT3B_HUMAN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS=Homo sapiens GN=STT3B PE=1 SV=1 1 145.332 2.07188E-22 254.3 233.05 254.3 1 S SLNSSPWSGLMALGNSRHGHHGPGAQCAHKA X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPXXXXXXXXXXXXXX SSLNSSPWSGLMALGNS(1)R S(-197.4)S(-189.41)LNS(-159.69)S(-154.93)PWS(-145.33)GLMALGNS(145.33)R 17 2 -1.0122 55635 0 0 28483 0 0 56951 0 0 28982 0 0 51932 0 0 62471 0 0 54773 0 0 50941 0 0 32901 0 0 103080 0 0 52650 0 0 26910 0 0 57214 0 0 30266 0 0 53017 0 0 61173 0 0 55019 0 0 54650 0 0 33391 0 0 98245 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 95224000 95224000 0 0 NaN 2834 1543 29 29 4367 4651;4652 4955;4956 5500;5501 4956 5501 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23294 4956 5501 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23294 4956 5501 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23294 Q8TCN5 388 Q8TCN5 Q8TCN5 Zinc finger protein 507 ZNF507 sp|Q8TCN5|ZN507_HUMAN Zinc finger protein 507 OS=Homo sapiens GN=ZNF507 PE=1 SV=2 0.41595 1.53621 0.0134547 63.944 36.806 63.944 S IPDSLLTSAQKIISSSPNKKGHVNVIVERLP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX IIS(0.292)S(0.292)S(0.416)PNKK IIS(-1.54)S(-1.54)S(1.54)PNKK 5 3 0.68871 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2835 1544 388 388 1864 1968 2126 2383 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12202 2126 2383 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12202 2126 2383 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12202 Q8TD16 582 Q8TD16 Q8TD16 Protein bicaudal D homolog 2 BICD2 sp|Q8TD16|BICD2_HUMAN Protein bicaudal D homolog 2 OS=Homo sapiens GN=BICD2 PE=1 SV=1 1 89.698 0.00916901 89.698 16.875 89.698 1 S TSPGGRTSPEARGRRSPILLPKGLLAPEAGR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX S(1)PILLPK S(89.7)PILLPK 1 2 -0.10363 78356 0 0 79360 0 0 80974 0 0 81303 0 0 86605 0 0 70436 0 0 92183 0 0 84316 0 0 79782 0 0 8422.3 0 0 74154 0 0 74980 0 0 81465 0 0 83186 0 0 87621 0 0 71277 0 0 93227 0 0 84291 0 0 79247 0 0 9881.9 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 159240000 159240000 0 0 NaN 2836 1545 582 582 1591;4121 1677;4394 1813;4685 2014;5201 4685 5201 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18274 4685 5201 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18274 4685 5201 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18274 Q8TD19 331 Q8TD19 Q8TD19 Serine/threonine-protein kinase Nek9 NEK9 sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1 SV=2 0.332918 0 0.00600253 85.203 62.67 85.203 S EEKVTLLNAPTKRPRSSTVTEAPIAVVTSRT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPX S(0.333)S(0.333)T(0.333)VT(0.001)EAPIAVVTSR S(0)S(0)T(0)VT(-24.26)EAPIAVVT(-83.78)S(-83.41)R 1 3 0.084641 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2837 1546 331 331 4486 4778 5088 5647 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17450 5088 5647 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17450 5088 5647 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17450 Q8TD19 332 Q8TD19 Q8TD19 Serine/threonine-protein kinase Nek9 NEK9 sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1 SV=2 0.332918 0 0.00600253 85.203 62.67 85.203 S EKVTLLNAPTKRPRSSTVTEAPIAVVTSRTS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.333)S(0.333)T(0.333)VT(0.001)EAPIAVVTSR S(0)S(0)T(0)VT(-24.26)EAPIAVVT(-83.78)S(-83.41)R 2 3 0.084641 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2838 1546 332 332 4486 4778 5088 5647 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17450 5088 5647 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17450 5088 5647 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17450 Q8TD19 868 Q8TD19 Q8TD19 Serine/threonine-protein kinase Nek9 NEK9 sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1 SV=2 0.81261 6.37134 1.46073E-07 154.86 126.28 154.86 1 S VASEAPLEHKPQVEASSPRLNPAVTCAGKGT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX VASEAPLEHKPQVEAS(0.813)S(0.187)PR VAS(-130.81)EAPLEHKPQVEAS(6.37)S(-6.37)PR 16 4 -0.70474 25190 0 0 26646 0 0 28462 0 0 29292 0 0 23720 0 0 31654 0 0 28686 0 0 31701 0 0 32420 0 0 12941 0 0 23849 0 0 25187 0 0 28423 0 0 29953 0 0 24424 0 0 31648 0 0 29064 0 0 32187 0 0 31831 0 0 12920 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25048000 25048000 0 0 NaN 2839 1546 868 868 5053 5387 5739 6378 5739 6378 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12033 5739 6378 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12033 5739 6378 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12033 Q8TDB6 9 Q8TDB6 Q8TDB6 E3 ubiquitin-protein ligase DTX3L DTX3L sp|Q8TDB6|DTX3L_HUMAN E3 ubiquitin-protein ligase DTX3L OS=Homo sapiens GN=DTX3L PE=1 SV=1 0.999893 39.7024 7.06705E-11 103.67 80.145 103.67 1 S _______MASHLRPPSPLLVRVYKSGPRVRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPXXXXXXXXXX ASHLRPPS(1)PLLVR AS(-39.7)HLRPPS(39.7)PLLVR 8 3 -0.26603 3173.5 0 0 3121.9 0 0 3789.7 0 0 2798.6 0 0 3881.4 0 0 3392.5 0 0 2969.5 0 0 3143.6 0 0 3352 0 0 1365.6 0 0 3005.2 0 0 2947.3 0 0 3780 0 0 2902.8 0 0 3920.9 0 0 3373.4 0 0 3077 0 0 3204 0 0 3291.2 0 0 1358.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 35055000 35055000 0 0 NaN 2840 1547 9 9 463 493 530 594 530 594 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15738 530 594 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15738 530 594 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15738 Q8TDX7 195 Q8TDX7 Q8TDX7 Serine/threonine-protein kinase Nek7 NEK7 sp|Q8TDX7|NEK7_HUMAN Serine/threonine-protein kinase Nek7 OS=Homo sapiens GN=NEK7 PE=1 SV=1 0.999645 37.5572 3.90061E-08 170.32 150.56 170.32 1 S LGLGRFFSSKTTAAHSLVGTPYYMSPERIHE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPXXX TTAAHS(1)LVGTPYYMSPER T(-37.56)T(-37.56)AAHS(37.56)LVGT(-54.28)PY(-105.81)Y(-113.36)MS(-124.14)PER 6 3 -0.036701 5240.7 0 0 5529.8 0 0 5126.3 0 0 6574.2 0 0 6733.2 0 0 5004.7 0 0 6965.1 0 0 6374.6 0 0 5507 0 0 10040 0 0 4958.7 0 0 5229.8 0 0 5188.6 0 0 6661.3 0 0 6739.9 0 0 5122.6 0 0 7038.8 0 0 6643.6 0 0 5495.6 0 0 9601.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13705000 13705000 0 0 NaN 2841 1548 195 195 4973 5302 5649 6278 5649 6278 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15357 5649 6278 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15357 5649 6278 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15357 Q8TE77 9 Q8TE77 Q8TE77 Protein phosphatase Slingshot homolog 3 SSH3 sp|Q8TE77|SSH3_HUMAN Protein phosphatase Slingshot homolog 3 OS=Homo sapiens GN=SSH3 PE=1 SV=2 0.610544 4.9271 4.84982E-12 59.352 45.466 59.352 1 S _______MALVTVSRSPPGSGASTPVGPWDQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPPP ALVT(0.023)VS(0.196)RS(0.611)PPGS(0.065)GAS(0.079)T(0.027)PVGPWDQAVQR ALVT(-14.31)VS(-4.93)RS(4.93)PPGS(-9.73)GAS(-8.89)T(-13.6)PVGPWDQAVQR 8 3 0.17814 4563.9 0 0 3835.8 0 0 5614.5 0 0 5100.8 0 0 7750.7 0 0 3901.1 0 0 6694.6 0 0 4702 0 0 5544.1 0 0 22988 0 0 4322.6 0 0 3630.8 0 0 5617.2 0 0 5140.8 0 0 7723.3 0 0 4017.1 0 0 6833.7 0 0 5378.1 0 0 5519.1 0 0 21755 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 50461000 50461000 0 0 NaN 2842 1549 9 9 332 353 379 420 379 420 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20526 379 420 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20526 379 420 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20526 Q8TE77 37 Q8TE77 Q8TE77 Protein phosphatase Slingshot homolog 3 SSH3 sp|Q8TE77|SSH3_HUMAN Protein phosphatase Slingshot homolog 3 OS=Homo sapiens GN=SSH3 PE=1 SV=2 1 110.077 0.000843131 110.08 74.425 110.08 1 S WDQAVQRRSRLQRRQSFAVLRGAVLGLQDGG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX RQS(1)FAVLR RQS(110.08)FAVLR 3 3 0.15712 22738 0 0 6447.4 0 0 23365 0 0 7627.9 0 0 7656 0 0 26796 0 0 6642.9 0 0 14471 0 0 7158.1 0 0 886.25 0 0 21518 0 0 6097.4 0 0 23297 0 0 8068 0 0 8683 0 0 25851 0 0 6824.7 0 0 15020 0 0 7041.1 0 0 1169.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16471000 16471000 0 0 NaN 2843 1549 37 37 3420 3632 3874 4300 3874 4300 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12394 3874 4300 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12394 3874 4300 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12394 Q8TEA8 197 Q8TEA8 Q8TEA8 D-tyrosyl-tRNA(Tyr) deacylase 1 DTD1 sp|Q8TEA8|DTD1_HUMAN D-tyrosyl-tRNA(Tyr) deacylase 1 OS=Homo sapiens GN=DTD1 PE=1 SV=2 0.941219 12.0553 6.72352E-32 320.05 299.59 320.05 1 S SKERNTPRKEDRSASSGAEGDVSSEREP___ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPXXX SAS(0.059)S(0.941)GAEGDVSSEREP S(-38.13)AS(-12.06)S(12.06)GAEGDVS(-83.93)S(-105.16)EREP 4 2 -0.095402 18521 0 0 18291 0 0 16634 0 0 16261 0 0 21892 0 0 20635 0 0 24450 0 0 20950 0 0 18946 0 0 4101 0 0 17519 0 0 17267 0 0 16927 0 0 16890 0 0 21936 0 0 20500 0 0 24615 0 0 21126 0 0 18928 0 0 4346.5 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 38709000 38709000 0 0 NaN 2844 1550 197 197 3620;3621 3848;3849 4101;4102 4558;4559 4102 4559 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7857 4102 4559 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7857 4102 4559 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7857 Q8TEH3 412 Q8TEH3 Q8TEH3 DENN domain-containing protein 1A DENND1A sp|Q8TEH3|DEN1A_HUMAN DENN domain-containing protein 1A OS=Homo sapiens GN=DENND1A PE=1 SV=2 0.995855 23.8066 0.0340291 46.985 8.4054 46.985 1 S SDKLYHQWLSTVRKGSGAILNTVKTKANPAM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPXXXXXXX GS(0.996)GAILNT(0.004)VK GS(23.81)GAILNT(-23.81)VK 2 3 -1.1161 12324 0 0 20514 0 0 12283 0 0 21609 0 0 12211 0 0 11373 0 0 12282 0 0 14627 0 0 22191 0 0 2052.7 0 0 11661 0 0 19385 0 0 12370 0 0 21956 0 0 12407 0 0 11901 0 0 12770 0 0 14608 0 0 21476 0 0 2271.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21645000 21645000 0 0 NaN 2845 1551 412 412 1606 1692 1828 2033 1828 2033 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6984 1828 2033 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6984 1828 2033 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6984 Q8TEH3 592 Q8TEH3 Q8TEH3 DENN domain-containing protein 1A DENND1A sp|Q8TEH3|DEN1A_HUMAN DENN domain-containing protein 1A OS=Homo sapiens GN=DENND1A PE=1 SV=2 1 102.276 0.000395963 102.28 67.052 102.28 1 S NLDMEAALQPLGQAKSLEDLRAPKDLREQPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(1)LEDLRAPK S(102.28)LEDLRAPK 1 3 -0.6948 8136.5 0 0 9399.9 0 0 8932.4 0 0 9595.6 0 0 11849 0 0 8105.4 0 0 11835 0 0 9082.1 0 0 10228 0 0 1394.2 0 0 7702.2 0 0 8880.9 0 0 8984.3 0 0 9816.5 0 0 11851 0 0 8205.8 0 0 12003 0 0 9114.2 0 0 10160 0 0 1523 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15854000 15854000 0 0 NaN 2846 1551 592 592 3928 4187 4469 4968 4469 4968 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14316 4469 4968 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14316 4469 4968 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14316 Q8TEK3 1104 Q8TEK3 Q8TEK3 Histone-lysine N-methyltransferase, H3 lysine-79 specific DOT1L sp|Q8TEK3|DOT1L_HUMAN Histone-lysine N-methyltransferase, H3 lysine-79 specific OS=Homo sapiens GN=DOT1L PE=1 SV=2 0.999999 59.8791 1.03002E-15 228.9 200.61 228.9 1 S RKRASAGTPSLSAGVSPKRRALPSVAGLFTQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPXXXXXXXXXXXXX ASAGTPSLSAGVS(1)PK AS(-155.06)AGT(-110.71)PS(-97.18)LS(-59.88)AGVS(59.88)PK 13 2 -0.33078 33911 0 0 13586 0 0 32615 0 0 13065 0 0 16524 0 0 35411 0 0 18477 0 0 22611 0 0 13767 0 0 11390 0 0 32083 0 0 12831 0 0 32723 0 0 13805 0 0 17742 0 0 34358 0 0 18585 0 0 23520 0 0 13783 0 0 11249 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11211000 11211000 0 0 NaN 2847 1552 1104 1104 432 461 496 556 496 556 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13547 496 556 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13547 496 556 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13547 Q8TEK3 471 Q8TEK3 Q8TEK3 Histone-lysine N-methyltransferase, H3 lysine-79 specific DOT1L sp|Q8TEK3|DOT1L_HUMAN Histone-lysine N-methyltransferase, H3 lysine-79 specific OS=Homo sapiens GN=DOT1L PE=1 SV=2 1 83.1243 4.61973E-05 121.33 100.67 121.33 1 S PHSPFYQLPPSVQRHSPNPLLVAPTPPALQK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP HS(1)PNPLLVAPTPPALQK HS(83.12)PNPLLVAPT(-83.12)PPALQK 2 3 0.14389 10141 0 0 6064 0 0 8891.7 0 0 7601 0 0 4659 0 0 9235.5 0 0 4450.2 0 0 7167.1 0 0 6761.8 0 0 11689 0 0 9591.2 0 0 5737.2 0 0 8973.1 0 0 7736.9 0 0 4977.1 0 0 9180.4 0 0 4603.3 0 0 7621.5 0 0 6573.8 0 0 11172 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13172000 13172000 0 0 NaN 2848 1552 471 471 1751 1848 1994 2222 1994 2222 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19043 1994 2222 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19043 1994 2222 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19043 Q8TEK3 834 Q8TEK3 Q8TEK3 Histone-lysine N-methyltransferase, H3 lysine-79 specific DOT1L sp|Q8TEK3|DOT1L_HUMAN Histone-lysine N-methyltransferase, H3 lysine-79 specific OS=Homo sapiens GN=DOT1L PE=1 SV=2 1 65.7061 2.2524E-05 126.5 110.61 126.5 1 S VPGSMKLSPQDPRPLSPGALQLAGEKSSEKG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPXXXXX LSPQDPRPLS(1)PGALQLAGEK LS(-65.71)PQDPRPLS(65.71)PGALQLAGEK 10 3 0.13831 15943 0 0 19739 0 0 15995 0 0 18087 0 0 16302 0 0 16240 0 0 14826 0 0 15597 0 0 19526 0 0 17757 0 0 15087 0 0 18637 0 0 16104 0 0 18642 0 0 16508 0 0 16386 0 0 15291 0 0 16205 0 0 19067 0 0 17081 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27747000 27747000 0 0 NaN 2849 1552 834 834 2576 2720 2918 3252 2918 3252 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19188 2918 3252 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19188 2918 3252 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19188 Q8TEK3 1243 Q8TEK3 Q8TEK3 Histone-lysine N-methyltransferase, H3 lysine-79 specific DOT1L sp|Q8TEK3|DOT1L_HUMAN Histone-lysine N-methyltransferase, H3 lysine-79 specific OS=Homo sapiens GN=DOT1L PE=1 SV=2 0.333296 0 0.0239715 79.652 48.012 79.652 S KPAPAGEPVNSSKWKSTFSPISDIGLAKSAD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX S(0.333)T(0.333)FS(0.333)PISDIGLAK S(0)T(0)FS(0)PIS(-34.73)DIGLAK 1 3 0.52729 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2850 1552 1243 1243 4504 4797 5109 5674 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22932 5109 5674 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22932 5109 5674 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22932 Q8TEK3 1246 Q8TEK3 Q8TEK3 Histone-lysine N-methyltransferase, H3 lysine-79 specific DOT1L sp|Q8TEK3|DOT1L_HUMAN Histone-lysine N-methyltransferase, H3 lysine-79 specific OS=Homo sapiens GN=DOT1L PE=1 SV=2 0.333296 0 0.0239715 79.652 48.012 79.652 S PAGEPVNSSKWKSTFSPISDIGLAKSADSPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.333)T(0.333)FS(0.333)PISDIGLAK S(0)T(0)FS(0)PIS(-34.73)DIGLAK 4 3 0.52729 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2851 1552 1246 1246 4504 4797 5109 5674 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22932 5109 5674 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22932 5109 5674 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22932 Q8TEM1 1874 Q8TEM1 Q8TEM1 Nuclear pore membrane glycoprotein 210 NUP210 sp|Q8TEM1|PO210_HUMAN Nuclear pore membrane glycoprotein 210 OS=Homo sapiens GN=NUP210 PE=1 SV=3 0.990606 20.8926 4.73467E-07 150.94 132.85 150.94 1 S SSPTSPNALPPARKASPPSGLWSPAYASH__ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX KAS(0.991)PPS(0.008)GLWS(0.001)PAYASH KAS(20.89)PPS(-20.89)GLWS(-28.73)PAY(-62.44)AS(-102.12)H 3 3 0.33475 8411.6 0 0 12038 0 0 8356.5 0 0 9771 0 0 9150.3 0 0 9810.5 0 0 9940.9 0 0 11165 0 0 12692 0 0 7444.9 0 0 7959.3 0 0 11359 0 0 8428.9 0 0 10172 0 0 9252.6 0 0 9862.8 0 0 10156 0 0 11371 0 0 12407 0 0 7268.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 52677000 52677000 0 0 NaN 2852 1553 1874 1874 2015 2132 2297 2564 2297 2564 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16802 2297 2564 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16802 2297 2564 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16802 Q8TER5 984 Q8TER5 Q8TER5 Rho guanine nucleotide exchange factor 40 ARHGEF40 sp|Q8TER5|ARH40_HUMAN Rho guanine nucleotide exchange factor 40 OS=Homo sapiens GN=ARHGEF40 PE=1 SV=3 0.491357 0 1.26499E-05 132.01 98.33 132.01 S RADGASSGGAQWGPRSPSPSLSSLLLPSSPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.491)PS(0.491)PS(0.017)LSSLLLPSSPGPR S(0)PS(0)PS(-14.54)LS(-62.24)S(-79.3)LLLPS(-131.64)S(-132.01)PGPR 1 3 2.5776 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2853 1554 984 984 4191 4466 4760 5285 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22531 4760 5285 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22531 4760 5285 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22531 Q8TER5 986 Q8TER5 Q8TER5 Rho guanine nucleotide exchange factor 40 ARHGEF40 sp|Q8TER5|ARH40_HUMAN Rho guanine nucleotide exchange factor 40 OS=Homo sapiens GN=ARHGEF40 PE=1 SV=3 0.491357 0 1.26499E-05 132.01 98.33 132.01 S DGASSGGAQWGPRSPSPSLSSLLLPSSPGPR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.491)PS(0.491)PS(0.017)LSSLLLPSSPGPR S(0)PS(0)PS(-14.54)LS(-62.24)S(-79.3)LLLPS(-131.64)S(-132.01)PGPR 3 3 2.5776 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2854 1554 986 986 4191 4466 4760 5285 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22531 4760 5285 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22531 4760 5285 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22531 Q8TEU7 1494 Q8TEU7 Q8TEU7 Rap guanine nucleotide exchange factor 6 RAPGEF6 sp|Q8TEU7|RPGF6_HUMAN Rap guanine nucleotide exchange factor 6 OS=Homo sapiens GN=RAPGEF6 PE=1 SV=2 0.632382 2.35584 9.71869E-05 126.48 90.968 126.48 1 S VTSSTEKGLIVYCVTSPKKDDRYREPPPTPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX GLIVYCVT(0.368)S(0.632)PK GLIVY(-70.47)CVT(-2.36)S(2.36)PK 9 2 0.68878 15954 0 0 13230 0 0 15017 0 0 10202 0 0 7352.7 0 0 15478 0 0 8148.2 0 0 13618 0 0 13180 0 0 15687 0 0 15093 0 0 12480 0 0 15083 0 0 10745 0 0 7930.1 0 0 15285 0 0 8393.7 0 0 14205 0 0 12791 0 0 15086 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8182900 8182900 0 0 NaN 2855 1555 1494 1494 1501 1579 1704 1885 1704 1885 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19598 1704 1885 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19598 1704 1885 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19598 Q8TEU7 1094 Q8TEU7 Q8TEU7 Rap guanine nucleotide exchange factor 6 RAPGEF6 sp|Q8TEU7|RPGF6_HUMAN Rap guanine nucleotide exchange factor 6 OS=Homo sapiens GN=RAPGEF6 PE=1 SV=2 0.986963 18.7911 0.0126807 83.652 60.877 83.652 1 S LDVQGGAHKKRARRSSLLNAKKLYEDAQMAR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX RS(0.013)S(0.987)LLNAK RS(-18.79)S(18.79)LLNAK 3 2 0.4916 36056 0 0 20971 0 0 35020 0 0 24008 0 0 29646 0 0 34016 0 0 29833 0 0 31614 0 0 19932 0 0 10793 0 0 34114 0 0 19828 0 0 35258 0 0 24626 0 0 30395 0 0 33640 0 0 30088 0 0 32129 0 0 20087 0 0 10895 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25819000 25819000 0 0 NaN 2856 1555 1094 1094 3498 3715 3961 4399 3961 4399 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11078 3961 4399 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11078 3961 4399 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11078 Q8TF01 204 Q8TF01 Q8TF01 Arginine/serine-rich protein PNISR PNISR sp|Q8TF01|PNISR_HUMAN Arginine/serine-rich protein PNISR OS=Homo sapiens GN=PNISR PE=1 SV=2 0.998307 27.7059 0.000278561 123.2 92.315 123.2 1 S PGPPAPPQNRRERPSSFRDRQRSPIALPVKQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX ERPS(0.002)S(0.998)FRDR ERPS(-27.71)S(27.71)FRDR 5 3 1.1425 23513 0 0 31340 0 0 24386 0 0 28841 0 0 36947 0 0 22812 0 0 36269 0 0 34187 0 0 32042 0 0 4991.6 0 0 22252 0 0 29592 0 0 24657 0 0 29669 0 0 36739 0 0 23287 0 0 36836 0 0 34001 0 0 31795 0 0 5491.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 226740000 226740000 0 0 NaN 2857 1556 204 204 1123 1182 1272 1399 1272 1399 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5929 1272 1399 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5929 1272 1399 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5929 Q8TF01 211 Q8TF01 Q8TF01 Arginine/serine-rich protein PNISR PNISR sp|Q8TF01|PNISR_HUMAN Arginine/serine-rich protein PNISR OS=Homo sapiens GN=PNISR PE=1 SV=2 1 127.424 8.19278E-05 127.42 93.045 127.42 1 S QNRRERPSSFRDRQRSPIALPVKQEPPQIDA X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX QRS(1)PIALPVK QRS(127.42)PIALPVK 3 3 -0.64546 31423 0 0 42435 0 0 33924 0 0 42269 0 0 30178 0 0 29648 0 0 31641 0 0 35499 0 0 46926 0 0 3479.8 0 0 29744 0 0 40086 0 0 33973 0 0 43208 0 0 30881 0 0 30361 0 0 32556 0 0 35486 0 0 45654 0 0 4098.3 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 349130000 349130000 0 0 NaN 2858 1556 211 211 3128 3319 3549 3933;3934 3549 3933 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14757 3549 3933 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14757 3549 3933 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14757 Q8TF01 726 Q8TF01 Q8TF01 Arginine/serine-rich protein PNISR PNISR sp|Q8TF01|PNISR_HUMAN Arginine/serine-rich protein PNISR OS=Homo sapiens GN=PNISR PE=1 SV=2 0.896286 10.8111 0.0461604 53.124 42.25 53.124 1 S LKRKRESERTFSRSGSISVKIIRHDSRQDSK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX S(0.029)GS(0.896)IS(0.074)VK S(-14.85)GS(10.81)IS(-10.81)VK 3 2 0.30607 72223 0 0 28926 0 0 73716 0 0 24156 0 0 31900 0 0 67054 0 0 31352 0 0 43331 0 0 30722 0 0 4985.3 0 0 68347 0 0 27299 0 0 73629 0 0 25783 0 0 34833 0 0 65009 0 0 31922 0 0 44534 0 0 30340 0 0 5697.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 75547000 75547000 0 0 NaN 2859 1556 726 726 3809 4058 4330 4812 4330 4812 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11002 4330 4812 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11002 4330 4812 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11002 Q8TF01 601 Q8TF01 Q8TF01 Arginine/serine-rich protein PNISR PNISR sp|Q8TF01|PNISR_HUMAN Arginine/serine-rich protein PNISR OS=Homo sapiens GN=PNISR PE=1 SV=2 0.961409 13.9642 0.0343818 56.359 29.244 56.359 1 S RARVKIRDRRRSNRNSIERERRRNRSPSRER X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX S(0.039)NRNS(0.961)IER S(-13.96)NRNS(13.96)IER 5 2 1.3024 1854.8 0 0 2329.2 0 0 1818.3 0 0 2101 0 0 1463.5 0 0 1198.6 0 0 1832.6 0 0 2370.7 0 0 2501 0 0 5454.7 0 0 1755 0 0 2199 0 0 1829.4 0 0 2156.7 0 0 1512 0 0 1266.6 0 0 1866 0 0 2496.9 0 0 2439.4 0 0 5191.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 3253900 3253900 0 0 NaN 2860 1556 601 601 4049 4318 4607 5117 4607 5117 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4950 4607 5117 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4950 4607 5117 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4950 Q8TF01 670 Q8TF01 Q8TF01 Arginine/serine-rich protein PNISR PNISR sp|Q8TF01|PNISR_HUMAN Arginine/serine-rich protein PNISR OS=Homo sapiens GN=PNISR PE=1 SV=2 1 43.5437 0.0469066 43.544 12.358 43.544 2 S KHKGEAKEQERKKERSRSIDKDRKKKDKERE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX S(1)RS(1)IDKDR S(43.54)RS(43.54)IDKDR 1 3 0.48715 0 10912 0 0 7954 0 0 8706.8 0 0 6530 0 0 7915.2 0 0 9628.7 0 0 7423.9 0 0 9131.5 0 0 9954.6 0 0 1980.5 0 0 10317 0 0 7505.8 0 0 8883.4 0 0 6841.5 0 0 8074.5 0 0 9510.5 0 0 7649.8 0 0 9238.5 0 0 9714.9 0 0 2076.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 9468600 0 9468600 0 NaN 2861 1556 670 670 4283 4564;4565 4865 5399 4865 5399 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6311 4865 5399 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6311 4865 5399 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6311 Q8TF01 672 Q8TF01 Q8TF01 Arginine/serine-rich protein PNISR PNISR sp|Q8TF01|PNISR_HUMAN Arginine/serine-rich protein PNISR OS=Homo sapiens GN=PNISR PE=1 SV=2 1 43.5437 0.0147927 76.255 46.722 43.544 1;2 S KGEAKEQERKKERSRSIDKDRKKKDKERERE X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX S(1)RS(1)IDKDR S(43.54)RS(43.54)IDKDR 3 3 0.48715 10325 10912 0 16492 7954 0 11077 8706.8 0 15263 6530 0 12790 7915.2 0 12042 9628.7 0 10584 7423.9 0 13714 9131.5 0 17997 9954.6 0 1697.1 1980.5 0 9772.6 10317 0 15573 7505.8 0 11128 8883.4 0 15695 6841.5 0 12854 8074.5 0 12238 9510.5 0 11082 7649.8 0 13742 9238.5 0 17443 9714.9 0 1915.4 2076.3 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 63382000 53914000 9468600 0 NaN 2862 1556 672 672 4283 4564;4565 4864;4865 5398;5399 4865 5399 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6311 4864 5398 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5817 4864 5398 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5817 Q8TF01 563 Q8TF01 Q8TF01 Arginine/serine-rich protein PNISR PNISR sp|Q8TF01|PNISR_HUMAN Arginine/serine-rich protein PNISR OS=Homo sapiens GN=PNISR PE=1 SV=2 0.598685 1.78266 0.0327269 48.602 26.022 48.602 1 S RSSSPKRKKRHSRSRSPTIKARRSRSRSYSR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX S(0.397)RS(0.599)PT(0.004)IK S(-1.78)RS(1.78)PT(-21.55)IK 3 3 3.0257 24855 0 0 25931 0 0 22162 0 0 27084 0 0 23753 0 0 21699 0 0 21142 0 0 22975 0 0 25461 0 0 1970.5 0 0 23510 0 0 24502 0 0 22485 0 0 27652 0 0 23978 0 0 22010 0 0 21765 0 0 23055 0 0 24939 0 0 2387.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14195000 14195000 0 0 NaN 2863 1556 563 563 4301 4586 4886 5427 4886 5427 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7529 4886 5427 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7529 4886 5427 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7529 Q8TF40 263 Q8TF40 Q8TF40 Folliculin-interacting protein 1 FNIP1 sp|Q8TF40|FNIP1_HUMAN Folliculin-interacting protein 1 OS=Homo sapiens GN=FNIP1 PE=1 SV=3 0.595892 2.64991 1.3456E-08 171.84 149.27 171.84 1 S LNEDRDSGIARSASLSSLLITPFPSPNSSLT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP S(0.063)AS(0.324)LS(0.596)S(0.017)LLITPFPSPNSSLTR S(-9.73)AS(-2.65)LS(2.65)S(-15.47)LLIT(-68.8)PFPS(-96.62)PNS(-111.7)S(-111.7)LT(-110.08)R 5 3 -0.29798 4884.3 0 0 5322.9 0 0 7130 0 0 5686.2 0 0 5333.2 0 0 5679.6 0 0 4722.2 0 0 4970.7 0 0 5468.6 0 0 30933 0 0 4630.3 0 0 5030.4 0 0 7027.2 0 0 5816.2 0 0 5510.3 0 0 5742.6 0 0 4856.6 0 0 5945.5 0 0 5364.2 0 0 29243 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18019000 18019000 0 0 NaN 2864 1557 263 263 3609 3836 4089 4546 4089 4546 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23850 4089 4546 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23850 4089 4546 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23850 Q8TF40 614 Q8TF40 Q8TF40 Folliculin-interacting protein 1 FNIP1 sp|Q8TF40|FNIP1_HUMAN Folliculin-interacting protein 1 OS=Homo sapiens GN=FNIP1 PE=1 SV=3 0.999998 56.5185 5.02716E-11 185.71 167.22 185.71 1 S ESEEIRTPNCNCKYCSHPLLGQNVENISQQE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP YCS(1)HPLLGQNVENISQQER Y(-56.52)CS(56.52)HPLLGQNVENIS(-146.59)QQER 3 3 -0.6597 6938.6 0 0 7576.7 0 0 6882 0 0 6136.1 0 0 4986.9 0 0 6829.4 0 0 5525.6 0 0 7749.4 0 0 7056.4 0 0 11214 0 0 6565.4 0 0 7149.3 0 0 6910.9 0 0 6399.4 0 0 5181.7 0 0 6847.2 0 0 5640.6 0 0 8075.5 0 0 6897.7 0 0 10739 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9218500 9218500 0 0 NaN 2865 1557 614 614 5361 5711 6090 6769 6090 6769 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15187 6090 6769 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15187 6090 6769 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15187 Q8TF42 377 Q8TF42 Q8TF42 Ubiquitin-associated and SH3 domain-containing protein B UBASH3B sp|Q8TF42|UBS3B_HUMAN Ubiquitin-associated and SH3 domain-containing protein B OS=Homo sapiens GN=UBASH3B PE=1 SV=2 1 96.0675 0.00331521 96.067 70.631 96.067 1 S PLTIICQPMQPLRVNSQPGPQKRCLFVCRHG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX VNS(1)QPGPQK VNS(96.07)QPGPQK 3 2 -0.55397 18178 0 0 6904.1 0 0 17164 0 0 7854.8 0 0 106450 0 0 18001 0 0 104830 0 0 46079 0 0 6847 0 0 4945.9 0 0 17198 0 0 6527.5 0 0 18431 0 0 8170.1 0 0 102640 0 0 17952 0 0 104100 0 0 45281 0 0 10912 0 0 5723.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 74466000 74466000 0 0 NaN 2866 1558 377 377 5195 5538 5902 6558 5902 6558 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8470 5902 6558 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8470 5902 6558 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8470 Q8TF76 147 Q8TF76 Q8TF76 Serine/threonine-protein kinase haspin GSG2 sp|Q8TF76|HASP_HUMAN Serine/threonine-protein kinase haspin OS=Homo sapiens GN=GSG2 PE=1 SV=3 0.608384 1.93174 0.0106417 72.082 59.936 72.082 1 S PLRLPPFPSRDSGRLSPDLSVCGQPRDGDEL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPXXXXX DS(0.39)GRLS(0.608)PDLS(0.002)VCGQPR DS(-1.93)GRLS(1.93)PDLS(-25.61)VCGQPR 6 3 -0.32845 16307 0 0 14973 0 0 16001 0 0 14305 0 0 9674.6 0 0 16486 0 0 8881.2 0 0 13168 0 0 14641 0 0 5035.2 0 0 15430 0 0 14140 0 0 16051 0 0 14764 0 0 10186 0 0 16395 0 0 9236.2 0 0 13489 0 0 14202 0 0 5046 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30890000 30890000 0 0 NaN 2867 1559 147 147 807 855 911 1003 911 1003 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12640 911 1003 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12640 911 1003 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12640 Q8TF76 108 Q8TF76 Q8TF76 Serine/threonine-protein kinase haspin GSG2 sp|Q8TF76|HASP_HUMAN Serine/threonine-protein kinase haspin OS=Homo sapiens GN=GSG2 PE=1 SV=3 0.870158 5.84554 0.0437123 40.278 21.445 40.278 2 S SLTVTPKRWKLRARPSLTVTPRRLGLRARPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX LRARPS(0.87)LT(0.629)VT(0.501)PR LRARPS(5.85)LT(1.28)VT(-1.28)PR 6 4 -2.7947 0 8306.4 0 0 8617 0 0 8082.7 0 0 7504 0 0 6477.6 0 0 8346.6 0 0 6526.7 0 0 7576.2 0 0 8734.1 0 0 3987.6 0 0 7859.2 0 0 8133.9 0 0 8132.1 0 0 7786.4 0 0 6671 0 0 8326.5 0 0 6701.7 0 0 7749.5 0 0 8524.3 0 0 3930.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 32138000 0 32138000 0 NaN 2868 1559 108 108 2532 2675 2871 3203 2871 3203 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5213 2871 3203 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5213 2871 3203 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5213 Q8WU79 219 Q8WU79 Q8WU79 Stromal membrane-associated protein 2 SMAP2 sp|Q8WU79|SMAP2_HUMAN Stromal membrane-associated protein 2 OS=Homo sapiens GN=SMAP2 PE=1 SV=1 0.948501 13.6996 9.69502E-05 102.08 86.513 102.08 1 S SNTLEKDLDLLASVPSPSSSGSRKVVGSMPT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPXXXXXXXX DLDLLASVPS(0.949)PS(0.04)S(0.009)S(0.002)GSR DLDLLAS(-37.63)VPS(13.7)PS(-13.7)S(-20.43)S(-27.07)GS(-33.6)R 10 3 -0.30427 3966.9 0 0 5943.1 0 0 4919.8 0 0 5582.2 0 0 4550.9 0 0 3360.3 0 0 4957 0 0 5922.9 0 0 6200.6 0 0 8248.8 0 0 3757.2 0 0 5612.2 0 0 4895.4 0 0 5717.9 0 0 4646.9 0 0 3515.1 0 0 5060.3 0 0 6090.3 0 0 6065.4 0 0 7904.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 32258000 32258000 0 0 NaN 2869 1560 219 219 729 773 824 911 824 911 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20603 824 911 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20603 824 911 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20603 Q8WU79 240 Q8WU79 Q8WU79 Stromal membrane-associated protein 2 SMAP2 sp|Q8WU79|SMAP2_HUMAN Stromal membrane-associated protein 2 OS=Homo sapiens GN=SMAP2 PE=1 SV=1 0.820706 6.82837 0.00371292 90.98 70.089 90.98 1 S SRKVVGSMPTAGSAGSVPENLNLFPEPGSKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPPPPPPPX VVGS(0.001)MPT(0.008)AGS(0.17)AGS(0.821)VPENLNLFPEPGSK VVGS(-32.09)MPT(-19.88)AGS(-6.83)AGS(6.83)VPENLNLFPEPGS(-60.38)K 13 4 -3.3629 6157.6 0 0 7518.7 0 0 7872.2 0 0 8664.1 0 0 6952.4 0 0 8795.4 0 0 6944.9 0 0 10295 0 0 8907.6 0 0 38539 0 0 5833.1 0 0 7109.2 0 0 7817 0 0 8828.2 0 0 7111.4 0 0 8901.6 0 0 7123.4 0 0 11429 0 0 8705.8 0 0 36528 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 34440000 34440000 0 0 NaN 2870 1560 240 240 5305 5652 6027 6699 6027 6699 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23168 6027 6699 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23168 6027 6699 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23168 Q8WUA4 893 Q8WUA4 Q8WUA4 General transcription factor 3C polypeptide 2 GTF3C2 sp|Q8WUA4|TF3C2_HUMAN General transcription factor 3C polypeptide 2 OS=Homo sapiens GN=GTF3C2 PE=1 SV=2 0.759155 7.23345 3.31134E-05 132.25 119.4 103.29 1 S QLESRAHFNAMFQPSSPTRRPGFSPTSHRLL X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPXXXXXXXXXXXX AHFNAMFQPS(0.097)S(0.759)PT(0.144)R AHFNAMFQPS(-8.92)S(7.23)PT(-7.23)R 11 3 -0.44259 18525 0 0 19904 0 0 18860 0 0 20594 0 0 17731 0 0 19681 0 0 17216 0 0 19064 0 0 20045 0 0 12870 0 0 17531 0 0 18807 0 0 18957 0 0 21088 0 0 18056 0 0 19784 0 0 17627 0 0 19534 0 0 19658 0 0 12560 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 173610000 173610000 0 0 NaN 2871 1562 893 893 238 252;253 270;271 301;302 270 301 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12114 271 302 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15302 271 302 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15302 Q8WUA4 167 Q8WUA4 Q8WUA4 General transcription factor 3C polypeptide 2 GTF3C2 sp|Q8WUA4|TF3C2_HUMAN General transcription factor 3C polypeptide 2 OS=Homo sapiens GN=GTF3C2 PE=1 SV=2 0.866532 8.12407 0.0196467 58.164 37.222 58.164 1 S LLLKLSKDLDRPESQSPKRPPEDFETPSGER X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX DLDRPES(0.133)QS(0.867)PK DLDRPES(-8.12)QS(8.12)PK 9 3 1.2993 20358 0 0 18594 0 0 21433 0 0 20137 0 0 21334 0 0 19556 0 0 18891 0 0 22415 0 0 20505 0 0 2966.5 0 0 19268 0 0 17574 0 0 21514 0 0 20572 0 0 21622 0 0 19669 0 0 19391 0 0 22463 0 0 20164 0 0 3312.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24888000 24888000 0 0 NaN 2872 1562 167 167 730 774 825 912 825 912 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8552 825 912 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8552 825 912 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8552 Q8WUA4 901 Q8WUA4 Q8WUA4 General transcription factor 3C polypeptide 2 GTF3C2 sp|Q8WUA4|TF3C2_HUMAN General transcription factor 3C polypeptide 2 OS=Homo sapiens GN=GTF3C2 PE=1 SV=2 0.984032 19.0617 0.000167826 118.73 88.399 118.73 1 S NAMFQPSSPTRRPGFSPTSHRLLPTP_____ X;X;Oxidation (M);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX RPGFS(0.984)PT(0.012)S(0.004)HR RPGFS(19.06)PT(-19.06)S(-24.18)HR 5 3 -0.56929 8203.9 0 0 10016 0 0 8186.4 0 0 10788 0 0 9692.8 0 0 9798.8 0 0 9761.8 0 0 9820.7 0 0 9089.2 0 0 2813 0 0 7762.9 0 0 9466.4 0 0 8262.8 0 0 11013 0 0 9747.7 0 0 9871.6 0 0 9915 0 0 9934.7 0 0 8996.8 0 0 2876 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16491000 16491000 0 0 NaN 2873 1562 901 901 3385 3594 3834 4257 3834 4257 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6632 3834 4257 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6632 3834 4257 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6632 Q8WUA4 220 Q8WUA4 Q8WUA4 General transcription factor 3C polypeptide 2 GTF3C2 sp|Q8WUA4|TF3C2_HUMAN General transcription factor 3C polypeptide 2 OS=Homo sapiens GN=GTF3C2 PE=1 SV=2 0.982637 17.9518 0.000537935 117.52 66.428 117.52 1 S ALPAPVSCPEGPKVSSPTKPKKIRQPAACPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX VS(0.016)S(0.983)PT(0.002)KPK VS(-17.95)S(17.95)PT(-27.84)KPK 3 3 0.1907 87804 0 0 85316 0 0 72603 0 0 77575 0 0 48821 0 0 81317 0 0 52462 0 0 75241 0 0 92912 0 0 3826.6 0 0 83028 0 0 80551 0 0 73697 0 0 80184 0 0 51037 0 0 81272 0 0 54335 0 0 75823 0 0 89961 0 0 5344.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 157830000 157830000 0 0 NaN 2874 1562 220 220 5277 5624 5995 6661 5995 6661 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9115 5995 6661 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9115 5995 6661 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9115 Q8WUA7 167 Q8WUA7 Q8WUA7 TBC1 domain family member 22A TBC1D22A sp|Q8WUA7|TB22A_HUMAN TBC1 domain family member 22A OS=Homo sapiens GN=TBC1D22A PE=1 SV=2 0.796288 6.31595 1.04202E-34 298.21 281.9 298.21 1 S PAESASDAAPLQRSQSLPHSATVTLGGTSDP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.186)QS(0.796)LPHS(0.018)ATVTLGGTSDPSTLSSSALSER S(-6.32)QS(6.32)LPHS(-16.52)AT(-58.35)VT(-129.16)LGGT(-199.81)S(-197.46)DPS(-226.3)T(-225.33)LS(-245.75)S(-251.08)S(-259.73)ALS(-271.56)ER 3 3 0.36379 2644.8 0 0 2009.8 0 0 2708.6 0 0 1974.4 0 0 2268.8 0 0 3782.2 0 0 3334.8 0 0 3548.4 0 0 2116.4 0 0 20902 0 0 2502.9 0 0 1898.4 0 0 2720.3 0 0 2058.5 0 0 2342.3 0 0 3746.8 0 0 3310 0 0 4198.1 0 0 2139.9 0 0 19764 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 107620000 107620000 0 0 NaN 2875 1563 167 167 4239 4517 4814 5344 4814 5344 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16675 4814 5344 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16675 4814 5344 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16675 Q8WUI4 181 Q8WUI4 Q8WUI4 Histone deacetylase 7 HDAC7 sp|Q8WUI4|HDAC7_HUMAN Histone deacetylase 7 OS=Homo sapiens GN=HDAC7 PE=1 SV=2 0.940989 12.0265 0.00163085 98 65.561 98 1 S KKSLERRKNPLLRKESAPPSLRRRPAETLGD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX KES(0.941)APPS(0.059)LR KES(12.03)APPS(-12.03)LR 3 3 0.61547 13316 0 0 19207 0 0 12450 0 0 18290 0 0 28446 0 0 14643 0 0 27828 0 0 20544 0 0 18848 0 0 3439.9 0 0 12597 0 0 18139 0 0 12781 0 0 18777 0 0 27905 0 0 14921 0 0 28110 0 0 20482 0 0 18979 0 0 3714.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 33476000 33476000 0 0 NaN 2876 1564 181 181 2045 2164 2331 2598 2331 2598 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9219 2331 2598 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9219 2331 2598 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9219 Q8WUM0 131 Q8WUM0 Q8WUM0 Nuclear pore complex protein Nup133 NUP133 sp|Q8WUM0|NU133_HUMAN Nuclear pore complex protein Nup133 OS=Homo sapiens GN=NUP133 PE=1 SV=2 0.938736 11.8534 0.0173635 72.652 43.491 72.652 1 S CLVCKEKLIIWKIALSPITKLSVCKELQLPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX IALS(0.939)PIT(0.061)K IALS(11.85)PIT(-11.85)K 4 2 -0.25668 8477 0 0 9484.3 0 0 9074.1 0 0 9597.9 0 0 9858.5 0 0 8981.5 0 0 8149 0 0 9396.7 0 0 9691.1 0 0 12520 0 0 8023.7 0 0 8960.2 0 0 9109.1 0 0 9838 0 0 9935.4 0 0 9058.9 0 0 8419.3 0 0 9786.7 0 0 9496.8 0 0 12007 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5861700 5861700 0 0 NaN 2877 1565 131 131 1774 1873 2020 2251 2020 2251 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18825 2020 2251 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18825 2020 2251 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18825 Q8WUM0 56 Q8WUM0 Q8WUM0 Nuclear pore complex protein Nup133 NUP133 sp|Q8WUM0|NU133_HUMAN Nuclear pore complex protein Nup133 OS=Homo sapiens GN=NUP133 PE=1 SV=2 0.62048 2.14485 0.0555443 51.445 7.1277 51.445 1 S SAVSSPVLFSPVGRRSSLSSRGTPTRMFPHH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPXXXXXXXXXX RS(0.62)S(0.379)LS(0.001)SR RS(2.14)S(-2.14)LS(-28.8)S(-41.07)R 2 2 2.2791 4563.8 0 0 3660.8 0 0 3906.8 0 0 3321.3 0 0 3775.9 0 0 4323.3 0 0 3632.9 0 0 4280.5 0 0 3951.2 0 0 3852.1 0 0 4316.1 0 0 3456.3 0 0 3969.8 0 0 3447.1 0 0 3837.8 0 0 4295.4 0 0 3713.6 0 0 4411.4 0 0 3885.2 0 0 3726.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5268300 5268300 0 0 NaN 2878 1565 56 56 3501 3718 3964 4402 3964 4402 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5016 3964 4402 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5016 3964 4402 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5016 Q8WUQ7 73 Q8WUQ7 Q8WUQ7 Cactin CACTIN sp|Q8WUQ7|CATIN_HUMAN Cactin OS=Homo sapiens GN=CACTIN PE=1 SV=3 0.870394 8.2709 0.0480926 50.607 27.178 50.607 1 S DSEEERWQRSGMRSRSPPRPKWHSRDGSSQS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX S(0.13)RS(0.87)PPRPK S(-8.27)RS(8.27)PPRPK 3 3 -0.13836 29647 0 0 22935 0 0 32532 0 0 22279 0 0 19107 0 0 33939 0 0 20412 0 0 26147 0 0 25471 0 0 3013.5 0 0 28065 0 0 21662 0 0 32430 0 0 23103 0 0 20206 0 0 33406 0 0 20853 0 0 26620 0 0 24917 0 0 3442.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 44978000 44978000 0 0 NaN 2879 1567 73 73 4298 4583 4883 5424 4883 5424 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5733 4883 5424 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5733 4883 5424 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5733 Q8WUX9 417 Q8WUX9 Q8WUX9 Charged multivesicular body protein 7 CHMP7 sp|Q8WUX9|CHMP7_HUMAN Charged multivesicular body protein 7 OS=Homo sapiens GN=CHMP7 PE=1 SV=1 1 118.08 8.41679E-05 118.08 79.714 118.08 1 S PRNRHFTNSVPNPRISDAELEAELEKLSLSE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPXXXXX IS(1)DAELEAELEK IS(118.08)DAELEAELEK 2 3 -0.79564 5377.4 0 0 4545.9 0 0 4648.2 0 0 4675.5 0 0 4072.5 0 0 4590.6 0 0 2695.2 0 0 5387.7 0 0 5714.7 0 0 23775 0 0 5085.7 0 0 4295.1 0 0 4712.8 0 0 4791.4 0 0 4150.2 0 0 4659.9 0 0 2892.3 0 0 6089.8 0 0 5510.6 0 0 22512 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10685000 10685000 0 0 NaN 2880 1568 417 417 1934 2042 2204 2464 2204 2464 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20997 2204 2464 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20997 2204 2464 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20997 Q8WV19 9 Q8WV19 Q8WV19 Vesicle transport protein SFT2A SFT2D1 sp|Q8WV19|SFT2A_HUMAN Vesicle transport protein SFT2A OS=Homo sapiens GN=SFT2D1 PE=1 SV=1 1 66.952 1.85372E-07 141.23 126.74 141.23 1 S _______MEKLRRVLSGQDDEEQGLTAQVLD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP VLS(1)GQDDEEQGLTAQVLDASSLSFNTR VLS(66.95)GQDDEEQGLT(-66.95)AQVLDAS(-124.43)S(-129.02)LS(-136.4)FNT(-138.78)R 3 3 -0.26113 3851.3 0 0 6259.2 0 0 4850.6 0 0 4847.5 0 0 5869.1 0 0 5824.2 0 0 5553.3 0 0 5823.3 0 0 5146.1 0 0 77791 0 0 3648.1 0 0 5904.8 0 0 4838.7 0 0 5079.1 0 0 5891 0 0 5940.8 0 0 5656.8 0 0 8185.2 0 0 5094.9 0 0 73384 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 121920000 121920000 0 0 NaN 2881 1569 9 9 5173 5512 5874 6528 5874 6528 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23504 5874 6528 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23504 5874 6528 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23504 Q8WVC0 630 Q8WVC0 Q8WVC0 RNA polymerase-associated protein LEO1 LEO1 sp|Q8WVC0|LEO1_HUMAN RNA polymerase-associated protein LEO1 OS=Homo sapiens GN=LEO1 PE=1 SV=1 0.75216 4.8214 2.58235E-05 133.93 99.319 133.93 1 S EEDKAQRLLKAKKLTSDEEGEPSGKRKAEDD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX KLT(0.248)S(0.752)DEEGEPSGK KLT(-4.82)S(4.82)DEEGEPS(-61.23)GK 4 3 0.25066 37176 0 0 39608 0 0 35131 0 0 36951 0 0 44314 0 0 36412 0 0 45945 0 0 42773 0 0 42148 0 0 10649 0 0 35171 0 0 37402 0 0 35608 0 0 38094 0 0 44447 0 0 36621 0 0 46585 0 0 42979 0 0 41748 0 0 11018 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 47798000 47798000 0 0 NaN 2882 1570 630 630 2137;2138 2258;2259 2431;2432 2708;2709 2431 2708 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10646 2431 2708 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10646 2431 2708 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10646 Q8WVM8 303 Q8WVM8 Q8WVM8 Sec1 family domain-containing protein 1 SCFD1 sp|Q8WVM8|SCFD1_HUMAN Sec1 family domain-containing protein 1 OS=Homo sapiens GN=SCFD1 PE=1 SV=4 0.999994 53.7724 1.27224E-07 152.88 129.16 152.88 1 S HLNRVNLEESSGVENSPAGARPKRKNKKSYD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPXXXXXXXX VNLEESSGVENS(1)PAGARPK VNLEES(-53.77)S(-56.96)GVENS(53.77)PAGARPK 12 3 0.26914 31895 0 0 51654 0 0 33956 0 0 46381 0 0 31141 0 0 34385 0 0 30344 0 0 42499 0 0 51896 0 0 10900 0 0 30188 0 0 48766 0 0 34037 0 0 47752 0 0 31777 0 0 35123 0 0 31516 0 0 42644 0 0 50291 0 0 11247 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 54932000 54932000 0 0 NaN 2883 1571 303 303 5190 5532 5895 6551 5895 6551 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12399 5895 6551 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12399 5895 6551 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12399 Q8WVQ1 21 Q8WVQ1 Q8WVQ1 Soluble calcium-activated nucleotidase 1 CANT1 sp|Q8WVQ1|CANT1_HUMAN Soluble calcium-activated nucleotidase 1 OS=Homo sapiens GN=CANT1 PE=1 SV=1 1 128.575 8.88268E-11 197.15 175.38 197.15 1 S SEHPEWNESMHSLRISVGGLPVLASMTKAAD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPXXX IS(1)VGGLPVLASMTK IS(128.57)VGGLPVLAS(-128.57)MT(-168.06)K 2 3 0.24242 8230.5 0 0 9103.2 0 0 9040.7 0 0 8550.4 0 0 5033.7 0 0 9617.6 0 0 5819.3 0 0 8050.9 0 0 9867 0 0 10572 0 0 7791.2 0 0 8596.3 0 0 9009.3 0 0 8830.2 0 0 5359.7 0 0 9592.8 0 0 5996.6 0 0 8454.9 0 0 9564.1 0 0 10142 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10782000 10782000 0 0 NaN 2884 1572 21 21 1956 2067 2231 2492 2231 2492 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23923 2231 2492 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23923 2231 2492 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23923 Q8WVT3 182 Q8WVT3 Q8WVT3 Trafficking protein particle complex subunit 12 TRAPPC12 sp|Q8WVT3|TPC12_HUMAN Trafficking protein particle complex subunit 12 OS=Homo sapiens GN=TRAPPC12 PE=1 SV=3 0.500493 0.00860044 9.87964E-16 222.56 188.69 222.56 1 S APPASGDGFEPQMVKSPSFGGASEASARTPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX S(0.5)PS(0.5)FGGASEASAR S(0.01)PS(-0.01)FGGAS(-50.57)EAS(-116.02)AR 1 2 -0.50962 61355 0 0 72650 0 0 62876 0 0 68812 0 0 42240 0 0 70253 0 0 48674 0 0 61694 0 0 79611 0 0 8762.5 0 0 58063 0 0 68609 0 0 62984 0 0 70911 0 0 44204 0 0 70263 0 0 50084 0 0 62480 0 0 77240 0 0 9678.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 97387000 97387000 0 0 NaN 2885 1573 182 182 4173 4448 4740 5259 4740 5259 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10282 4740 5259 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10282 4740 5259 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10282 Q8WW12 87 Q8WW12 Q8WW12 PEST proteolytic signal-containing nuclear protein PCNP sp|Q8WW12|PCNP_HUMAN PEST proteolytic signal-containing nuclear protein OS=Homo sapiens GN=PCNP PE=1 SV=2 0.998687 28.8131 0.0341398 59.067 15.298 59.067 1 S GFAIGSQTTKKASAISIKLGSSKPKETVPTL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX AS(0.001)AIS(0.999)IK AS(-28.81)AIS(28.81)IK 5 2 -0.40911 22396 0 0 16998 0 0 24320 0 0 18395 0 0 12501 0 0 22553 0 0 13416 0 0 17469 0 0 18746 0 0 4880.1 0 0 21199 0 0 16065 0 0 24235 0 0 18869 0 0 13402 0 0 22366 0 0 13759 0 0 17867 0 0 18271 0 0 4999.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10285000 10285000 0 0 NaN 2886 1574 87 87 433 462 497 557 497 557 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14172 497 557 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14172 497 557 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14172 Q8WW12 147 Q8WW12 Q8WW12 PEST proteolytic signal-containing nuclear protein PCNP sp|Q8WW12|PCNP_HUMAN PEST proteolytic signal-containing nuclear protein OS=Homo sapiens GN=PCNP PE=1 SV=2 1 85.1635 6.11162E-05 125.41 114.5 125.41 1 S MKNIGRDTPTSAGPNSFNKGKHGFSDNQKLW X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX DTPTSAGPNS(1)FNK DT(-94.45)PT(-89.19)S(-85.16)AGPNS(85.16)FNK 10 3 1.2931 22344 0 0 21635 0 0 22397 0 0 23692 0 0 14277 0 0 25362 0 0 15255 0 0 20880 0 0 23115 0 0 4447.9 0 0 21144 0 0 20449 0 0 22452 0 0 24228 0 0 14989 0 0 25300 0 0 15697 0 0 21252 0 0 22474 0 0 4671.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 77014000 77014000 0 0 NaN 2887 1574 147 147 828 876 932 1027 932 1027 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11657 932 1027 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11657 932 1027 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11657 Q8WW12 119 Q8WW12 Q8WW12 PEST proteolytic signal-containing nuclear protein PCNP sp|Q8WW12|PCNP_HUMAN PEST proteolytic signal-containing nuclear protein OS=Homo sapiens GN=PCNP PE=1 SV=2 1 92.947 4.46086E-08 161.39 133.17 161.39 1 S PKTLSVAAAFNEDEDSEPEEMPPEAKMRMKN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPPPPPPXXXXX TLSVAAAFNEDEDS(1)EPEEMPPEAK T(-99.48)LS(-92.95)VAAAFNEDEDS(92.95)EPEEMPPEAK 14 3 -1.7072 32791 0 0 31875 0 0 33705 0 0 36950 0 0 32805 0 0 34670 0 0 35846 0 0 40698 0 0 38979 0 0 301910 0 0 31032 0 0 30140 0 0 33882 0 0 37592 0 0 33390 0 0 35497 0 0 36428 0 0 49687 0 0 38328 0 0 285230 0 0 10 0 0 10 0 0 10 0 0 10 0 0 10 0 0 10 0 0 10 0 0 10 0 0 10 0 0 10 0 0 121480000 121480000 0 0 NaN 2888 1574 119 119 4793 5112;5113 5446;5447;5448;5449;5450;5451;5452 6058;6059;6060;6061;6062;6063;6064;6065;6066;6067;6068 5447 6061 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19965 5447 6061 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19965 5447 6061 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19965 Q8WWI1 1493 Q8WWI1 Q8WWI1 LIM domain only protein 7 LMO7 sp|Q8WWI1|LMO7_HUMAN LIM domain only protein 7 OS=Homo sapiens GN=LMO7 PE=1 SV=3 0.989722 19.8359 2.49243E-07 160.57 132.85 160.57 1 S TPLHNDNSWIRQRSASVNKEPVSLPGIMRRG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX S(0.01)AS(0.99)VNKEPVSLPGIMR S(-19.84)AS(19.84)VNKEPVS(-75.62)LPGIMR 3 3 0.45528 43966 0 0 12242 0 0 45369 0 0 13153 0 0 16408 0 0 43609 0 0 20144 0 0 26384 0 0 12171 0 0 18037 0 0 41608 0 0 11570 0 0 45256 0 0 13939 0 0 18406 0 0 42170 0 0 20107 0 0 27676 0 0 12347 0 0 17595 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 77060000 77060000 0 0 NaN 2889 1575 1493 1493 3624 3852;3853 4105;4106 4562;4563 4106 4563 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18362 4106 4563 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18362 4106 4563 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18362 Q8WWI1 1421 Q8WWI1 Q8WWI1 LIM domain only protein 7 LMO7 sp|Q8WWI1|LMO7_HUMAN LIM domain only protein 7 OS=Homo sapiens GN=LMO7 PE=1 SV=3 0.493457 0 8.00675E-07 141.83 108.52 141.83 S TEEASSGFLPGDRNKSRSTTELDDYSTNKNG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPXX S(0.493)RS(0.493)T(0.011)T(0.002)ELDDYSTNK S(0)RS(0)T(-16.57)T(-23.46)ELDDY(-73.31)S(-86.63)T(-104.28)NK 1 3 0.086284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2890 1575 1421 1421 4306 4591 4892 5435 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11013 4892 5435 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11013 4892 5435 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11013 Q8WWI1 1423 Q8WWI1 Q8WWI1 LIM domain only protein 7 LMO7 sp|Q8WWI1|LMO7_HUMAN LIM domain only protein 7 OS=Homo sapiens GN=LMO7 PE=1 SV=3 0.493457 0 8.00675E-07 141.83 108.52 141.83 S EASSGFLPGDRNKSRSTTELDDYSTNKNGNN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.493)RS(0.493)T(0.011)T(0.002)ELDDYSTNK S(0)RS(0)T(-16.57)T(-23.46)ELDDY(-73.31)S(-86.63)T(-104.28)NK 3 3 0.086284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2891 1575 1423 1423 4306 4591 4892 5435 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11013 4892 5435 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11013 4892 5435 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11013 Q8WWM7 594 Q8WWM7 Q8WWM7 Ataxin-2-like protein ATXN2L sp|Q8WWM7|ATX2L_HUMAN Ataxin-2-like protein OS=Homo sapiens GN=ATXN2L PE=1 SV=2 0.999389 35.294 6.90395E-06 135.01 107.16 110.33 1 S KEKEVDGLLTSEPMGSPVSSKTESVSDKEDK X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX EVDGLLTSEPMGS(0.999)PVSSK EVDGLLT(-43.68)S(-38.18)EPMGS(35.29)PVS(-35.29)S(-39.18)K 13 3 0.54663 30173 0 0 47357 0 0 30813 0 0 46235 0 0 35140 0 0 32405 0 0 37248 0 0 41564 0 0 46783 0 0 91064 0 0 28554 0 0 44730 0 0 31047 0 0 47319 0 0 35443 0 0 33385 0 0 38076 0 0 44080 0 0 45756 0 0 86710 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 109120000 109120000 0 0 NaN 2892 1576 594 594 1013;1202 1069;1264;1265 1156;1363;1364 1274;1510;1511 1363 1510 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17386 1156 1274 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18131 1156 1274 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18131 Q8WWM7 111 Q8WWM7 Q8WWM7 Ataxin-2-like protein ATXN2L sp|Q8WWM7|ATX2L_HUMAN Ataxin-2-like protein OS=Homo sapiens GN=ATXN2L PE=1 SV=2 1 106.502 2.01214E-05 135.43 115.13 122.13 1 S IGSARGQSTGKGPPQSPVFEGVYNNSRMLHF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPXXXX GPPQS(1)PVFEGVYNNSR GPPQS(106.5)PVFEGVY(-106.5)NNS(-111.54)R 5 3 -0.33316 31418 0 0 41128 0 0 31267 0 0 37168 0 0 28012 0 0 32474 0 0 28533 0 0 37535 0 0 43328 0 0 112040 0 0 29729 0 0 38830 0 0 31454 0 0 38329 0 0 28640 0 0 33035 0 0 29424 0 0 40830 0 0 42125 0 0 106370 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 100790000 100790000 0 0 NaN 2893 1576 111 111 1553 1635 1767;1768 1962;1963;1964 1767 1962 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15807 1768 1964 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15834 1768 1964 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15834 Q8WWM7 559 Q8WWM7 Q8WWM7 Ataxin-2-like protein ATXN2L sp|Q8WWM7|ATX2L_HUMAN Ataxin-2-like protein OS=Homo sapiens GN=ATXN2L PE=1 SV=2 0.885724 9.38593 1.0136E-10 182.22 163.99 182.22 1 S ELRKFGAQFKLQPSSSPENSLDPFPPRILKE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPXXXX LQPS(0.012)S(0.102)S(0.886)PENSLDPFPPR LQPS(-18.59)S(-9.39)S(9.39)PENS(-81.83)LDPFPPR 6 3 0.57213 9868 0 0 12004 0 0 11224 0 0 11234 0 0 13812 0 0 10609 0 0 11293 0 0 11574 0 0 12405 0 0 16838 0 0 9342.7 0 0 11335 0 0 11250 0 0 11571 0 0 13829 0 0 10705 0 0 11647 0 0 12079 0 0 12193 0 0 16123 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 32809000 32809000 0 0 NaN 2894 1576 559 559 2526 2668 2864 3195;3196 2864 3195 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19710 2864 3195 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19710 2864 3195 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19710 Q8WWM7 449 Q8WWM7 Q8WWM7 Ataxin-2-like protein ATXN2L sp|Q8WWM7|ATX2L_HUMAN Ataxin-2-like protein OS=Homo sapiens GN=ATXN2L PE=1 SV=2 0.999933 41.7414 0.00763466 80.763 52.657 80.763 1 S SVPPPPAVGRMYPPRSPKSAAPAPISASCPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPXXXXXXXXXXXXX MYPPRS(1)PK MY(-41.74)PPRS(41.74)PK 6 3 0.37755 50215 0 0 91349 0 0 50738 0 0 78072 0 0 40785 0 0 55552 0 0 48275 0 0 66638 0 0 95315 0 0 4891.5 0 0 47518 0 0 86218 0 0 50952 0 0 80610 0 0 42126 0 0 56836 0 0 50068 0 0 66560 0 0 92052 0 0 6148.2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 99102000 99102000 0 0 NaN 2895 1576 449 449 2767 2936 3146 3495;3496 3146 3496 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10563 3146 3496 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10563 3146 3496 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10563 Q8WWM7 335 Q8WWM7 Q8WWM7 Ataxin-2-like protein ATXN2L sp|Q8WWM7|ATX2L_HUMAN Ataxin-2-like protein OS=Homo sapiens GN=ATXN2L PE=1 SV=2 0.999987 49.0058 0.00553525 85.51 66.224 85.51 1 S GRTEEEKHSAVQRQGSGRESPSLASREGKYI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX QGS(1)GRESPSLASR QGS(49.01)GRES(-49.01)PS(-65.34)LAS(-78.47)R 3 3 -1.0297 9810.2 0 0 8126 0 0 10320 0 0 6854.8 0 0 8272 0 0 9708.1 0 0 8183.5 0 0 9588.3 0 0 7634.6 0 0 1813.4 0 0 9284.9 0 0 7669.1 0 0 10337 0 0 7161.7 0 0 8513.6 0 0 9605.4 0 0 8319.4 0 0 9677.1 0 0 7556.4 0 0 1929.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21411000 21411000 0 0 NaN 2896 1576 335 335 3037 3219 3443 3816 3443 3816 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6370 3443 3816 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6370 3443 3816 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6370 Q8WWM7 339 Q8WWM7 Q8WWM7 Ataxin-2-like protein ATXN2L sp|Q8WWM7|ATX2L_HUMAN Ataxin-2-like protein OS=Homo sapiens GN=ATXN2L PE=1 SV=2 0.999908 41.228 4.1519E-08 173.63 146.74 173.63 1 S EEKHSAVQRQGSGRESPSLASREGKYIPLPQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPXXXXXXXXX QGSGRES(1)PSLASR QGS(-47.77)GRES(41.23)PS(-41.23)LAS(-101.32)R 7 3 0.7645 9135.9 0 0 9829 0 0 8956.9 0 0 9445.5 0 0 15270 0 0 10102 0 0 13531 0 0 10283 0 0 10693 0 0 2688 0 0 8644.3 0 0 9283 0 0 9103.4 0 0 9732.3 0 0 15096 0 0 10104 0 0 13779 0 0 10389 0 0 10671 0 0 2769 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 57246000 57246000 0 0 NaN 2897 1576 339 339 3037 3219 3442 3815 3442 3815 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6062 3442 3815 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6062 3442 3815 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6062 Q8WWM7 32 Q8WWM7 Q8WWM7 Ataxin-2-like protein ATXN2L sp|Q8WWM7|ATX2L_HUMAN Ataxin-2-like protein OS=Homo sapiens GN=ATXN2L PE=1 SV=2 0.747727 4.72067 1.88546E-06 131.14 108.58 131.14 1 S PPTQQAVARRPPGGTSPPNGGLPGPLATSAA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPPPP RPPGGT(0.252)S(0.748)PPNGGLPGPLATSAAPPGPPAAASPCLGPVAAAGSGLR RPPGGT(-4.72)S(4.72)PPNGGLPGPLAT(-41.2)S(-41.2)AAPPGPPAAAS(-106.06)PCLGPVAAAGS(-130.09)GLR 7 4 0.028538 1954.5 0 0 1824 0 0 1799.6 0 0 2865.5 0 0 2196.6 0 0 2373.5 0 0 1962 0 0 2662.2 0 0 2392.5 0 0 22034 0 0 1848.8 0 0 1729 0 0 1825.4 0 0 2870.8 0 0 2202.8 0 0 2446.1 0 0 2020.2 0 0 3323.1 0 0 2342.4 0 0 20809 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 111720000 111720000 0 0 NaN 2898 1576 32 32 3396 3608 3848 4273 3848 4273 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19971 3848 4273 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19971 3848 4273 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19971 Q8WWM7 684 Q8WWM7 Q8WWM7 Ataxin-2-like protein ATXN2L sp|Q8WWM7|ATX2L_HUMAN Ataxin-2-like protein OS=Homo sapiens GN=ATXN2L PE=1 SV=2 0.53874 0.907512 1.27341E-06 142.29 126.77 142.29 1 S TKPLLSVNKSTSTPTSPGPRTHSTPSIPVLT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX STS(0.021)T(0.437)PT(0.003)S(0.539)PGPR S(-43.66)T(-39.83)S(-14.16)T(-0.91)PT(-22.07)S(0.91)PGPR 7 2 0.16509 9065.9 0 0 16203 0 0 8019.7 0 0 14484 0 0 5530.8 0 0 8038.7 0 0 6454.1 0 0 9640.9 0 0 16006 0 0 2614.1 0 0 8574.7 0 0 15296 0 0 8106.8 0 0 14873 0 0 5781.7 0 0 8370.2 0 0 6786.9 0 0 9687.2 0 0 15388 0 0 2684.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13863000 13863000 0 0 NaN 2899 1576 684 684 4534 4835 5152 5721 5152 5721 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6142 5152 5721 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6142 5152 5721 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6142 Q8WWM7 424 Q8WWM7 Q8WWM7 Ataxin-2-like protein ATXN2L sp|Q8WWM7|ATX2L_HUMAN Ataxin-2-like protein OS=Homo sapiens GN=ATXN2L PE=1 SV=2 0.853739 8.59802 7.71985E-18 231.68 201.58 231.68 1 S SPKAQRPLRGAKTLSSPSNRPSGETSVPPPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP T(0.026)LS(0.118)S(0.854)PS(0.002)NRPSGETSVPPPPAVGR T(-15.16)LS(-8.6)S(8.6)PS(-25.65)NRPS(-62.25)GET(-89.45)S(-94.11)VPPPPAVGR 4 3 0.34473 9913.5 0 0 16793 0 0 10915 0 0 15703 0 0 12038 0 0 11924 0 0 12080 0 0 11548 0 0 18667 0 0 11683 0 0 9384.5 0 0 15857 0 0 10947 0 0 16130 0 0 12157 0 0 12138 0 0 12474 0 0 11950 0 0 18139 0 0 11268 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 53796000 53796000 0 0 NaN 2900 1576 424 424 4792 5111 5445 6057 5445 6057 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12068 5445 6057 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12068 5445 6057 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12068 Q8WWQ0 1315 Q8WWQ0 Q8WWQ0 PH-interacting protein PHIP sp|Q8WWQ0|PHIP_HUMAN PH-interacting protein OS=Homo sapiens GN=PHIP PE=1 SV=2 0.931165 11.3122 0.0416079 46.319 28.653 46.319 1 S RKDHQPRRRLRNRAQSYDIQAWKKQCEELLN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX AQS(0.931)Y(0.069)DIQAWKK AQS(11.31)Y(-11.31)DIQAWKK 3 3 0.27284 18117 0 0 6708.5 0 0 19127 0 0 7479.4 0 0 9793.6 0 0 20634 0 0 9621.2 0 0 12102 0 0 7386 0 0 7618.9 0 0 17147 0 0 6341.7 0 0 19087 0 0 7843.9 0 0 10485 0 0 20003 0 0 9740.6 0 0 12699 0 0 7382.5 0 0 7454.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11590000 11590000 0 0 NaN 2901 1577 1315 1315 407 435 470 524 470 524 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17114 470 524 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17114 470 524 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17114 Q8WWQ0 911 Q8WWQ0 Q8WWQ0 PH-interacting protein PHIP sp|Q8WWQ0|PHIP_HUMAN PH-interacting protein OS=Homo sapiens GN=PHIP PE=1 SV=2 1 72.819 0.0314805 72.819 39.824 72.819 1 S KKEKKKVNEEKDGPISPKKKKPKERKQKRLA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX VNEEKDGPIS(1)PK VNEEKDGPIS(72.82)PK 10 3 0.16493 28054 0 0 24495 0 0 29543 0 0 25461 0 0 18539 0 0 29531 0 0 19884 0 0 24843 0 0 26642 0 0 6053.5 0 0 26552 0 0 23145 0 0 29530 0 0 26149 0 0 19489 0 0 29371 0 0 20361 0 0 25284 0 0 26001 0 0 6275.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 45531000 45531000 0 0 NaN 2902 1577 911 911 683;5189 727;5531 775;5894 857;6550 5894 6550 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11786 5894 6550 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11786 5894 6550 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11786 Q8WWQ0 1783 Q8WWQ0 Q8WWQ0 PH-interacting protein PHIP sp|Q8WWQ0|PHIP_HUMAN PH-interacting protein OS=Homo sapiens GN=PHIP PE=1 SV=2 1 107.998 1.82446E-22 252.87 221.88 252.87 1 S TRNQGRRTAFYNEDDSEEEQRQLLFEDTSLT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPXXXXXXXXXX TAFYNEDDS(1)EEEQR T(-108)AFY(-170.07)NEDDS(108)EEEQR 9 2 0.032395 20802 0 0 20253 0 0 22400 0 0 18887 0 0 14929 0 0 22697 0 0 16511 0 0 19483 0 0 21505 0 0 15167 0 0 19690 0 0 19124 0 0 22375 0 0 19537 0 0 15619 0 0 22568 0 0 16868 0 0 20124 0 0 21007 0 0 14732 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 30117000 30117000 0 0 NaN 2903 1577 1783 1783 4614 4921 5241 5820;5821 5241 5821 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12234 5241 5821 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12234 5241 5821 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12234 Q8WX92 557 Q8WX92 Q8WX92 Negative elongation factor B NELFB sp|Q8WX92|NELFB_HUMAN Negative elongation factor B OS=Homo sapiens GN=NELFB PE=1 SV=1 0.999915 40.6949 9.80095E-25 267.93 248.39 267.93 1 S SQLGEKLEQLDHRKPSPAQAAETPALELPLP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP KPS(1)PAQAAETPALELPLPSVPAPAPL KPS(40.69)PAQAAET(-40.69)PALELPLPS(-194.1)VPAPAPL 3 3 0.4553 44198 0 0 42677 0 0 40988 0 0 45264 0 0 34710 0 0 42225 0 0 38406 0 0 48144 0 0 48948 0 0 175460 0 0 41811 0 0 40330 0 0 41388 0 0 46269 0 0 35657 0 0 42865 0 0 39205 0 0 53350 0 0 47849 0 0 166330 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2053600000 2053600000 0 0 NaN 2904 1578 557 557 2169 2291 2465;2466 2745;2746 2465 2745 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23897 2465 2745 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23897 2465 2745 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23897 Q8WXA9 237 Q8WXA9 Q8WXA9 Splicing regulatory glutamine/lysine-rich protein 1 SREK1 sp|Q8WXA9|SREK1_HUMAN Splicing regulatory glutamine/lysine-rich protein 1 OS=Homo sapiens GN=SREK1 PE=1 SV=1 0.952386 13.0108 0.0140025 65.5 8.1521 65.5 1 S HNRSRSRQKDRRRSKSPHKKRSKSRERRKSR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX RS(0.048)KS(0.952)PHK RS(-13.01)KS(13.01)PHK 4 4 0.33727 19893 0 0 30915 0 0 18857 0 0 30441 0 0 24876 0 0 21875 0 0 30385 0 0 28962 0 0 33740 0 0 4445 0 0 18820 0 0 29202 0 0 19131 0 0 31147 0 0 24970 0 0 22406 0 0 30757 0 0 28910 0 0 33149 0 0 4855.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21213000 21213000 0 0 NaN 2905 1579 237 237 3471 3687 3933 4368 3933 4368 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5424 3933 4368 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5424 3933 4368 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5424 Q8WXF1 477 Q8WXF1 Q8WXF1 Paraspeckle component 1 PSPC1 sp|Q8WXF1|PSPC1_HUMAN Paraspeckle component 1 OS=Homo sapiens GN=PSPC1 PE=1 SV=1 0.93333 11.4862 0.000130606 101.71 81.611 101.71 1 S VHNDRFPQGPPSQMGSPMGSRTGSETPQAPM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPXXXXXXXXXX FPQGPPSQMGS(0.933)PMGS(0.066)R FPQGPPS(-33.84)QMGS(11.49)PMGS(-11.49)R 11 3 -0.95866 5178.5 0 0 5740.1 0 0 6245.5 0 0 5513.7 0 0 6443 0 0 6235.8 0 0 6732.1 0 0 6175.7 0 0 5930.1 0 0 7549.7 0 0 4904.2 0 0 5421.2 0 0 6230.5 0 0 5686.7 0 0 6530.1 0 0 6231.7 0 0 6816.8 0 0 6424.5 0 0 5885.3 0 0 7251.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6034400 6034400 0 0 NaN 2906 1580 477 477 1302 1373 1478 1640 1478 1640 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15885 1478 1640 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15885 1478 1640 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15885 Q8WXG6 1239 Q8WXG6 Q8WXG6 MAP kinase-activating death domain protein MADD sp|Q8WXG6|MADD_HUMAN MAP kinase-activating death domain protein OS=Homo sapiens GN=MADD PE=1 SV=2 0.949268 13.5621 3.64996E-16 218.81 198.97 218.81 1 S GGEGSVHLASSRGTLSDSEIETNSATSTIFG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP GT(0.042)LS(0.949)DS(0.009)EIETNSATSTIFGK GT(-13.56)LS(13.56)DS(-20.26)EIET(-115.77)NS(-160.89)AT(-189.42)S(-188.39)T(-196.59)IFGK 4 3 1.151 5818.2 0 0 7417.8 0 0 6255.8 0 0 8663.7 0 0 4640 0 0 6402.9 0 0 3857.7 0 0 7256.8 0 0 8316.6 0 0 18869 0 0 5507.1 0 0 7014.5 0 0 6252.8 0 0 8783.2 0 0 4797.2 0 0 6565.1 0 0 4086.5 0 0 7814.5 0 0 8016.9 0 0 17935 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14475000 14475000 0 0 NaN 2907 1581 1239 1239 1657 1748 1890 2108 1890 2108 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21112 1890 2108 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21112 1890 2108 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21112 Q8WXG6 813 Q8WXG6 Q8WXG6 MAP kinase-activating death domain protein MADD sp|Q8WXG6|MADD_HUMAN MAP kinase-activating death domain protein OS=Homo sapiens GN=MADD PE=1 SV=2 1 94.6162 0.0031257 94.616 71.896 94.616 1 S QHVSGNRAQKLLRPNSLRLASDSDAESDSRA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPXXXXXXXXXXXXX LLRPNS(1)LR LLRPNS(94.62)LR 6 3 0.079969 9392.3 0 0 16666 0 0 9027.2 0 0 15051 0 0 14969 0 0 8487.2 0 0 16351 0 0 14208 0 0 16829 0 0 1000.5 0 0 8886.2 0 0 15734 0 0 9186.2 0 0 15447 0 0 14860 0 0 8873.8 0 0 16591 0 0 14060 0 0 16585 0 0 1270.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16357000 16357000 0 0 NaN 2908 1581 813 813 2456 2594 2788 3115 2788 3115 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13032 2788 3115 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13032 2788 3115 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13032 Q8WXI9 135 Q8WXI9 Q8WXI9 Transcriptional repressor p66-beta GATAD2B sp|Q8WXI9|P66B_HUMAN Transcriptional repressor p66-beta OS=Homo sapiens GN=GATAD2B PE=1 SV=1 0.955201 13.2882 4.96849E-16 220.13 200.3 220.13 1 S TPSPDIIVLSDNEASSPRSSSRMEERLKAAN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX LTPSPDIIVLSDNEAS(0.045)S(0.955)PR LT(-198.84)PS(-193.37)PDIIVLS(-115.95)DNEAS(-13.29)S(13.29)PR 17 3 0.50595 3741.2 0 0 3045.6 0 0 4007.5 0 0 3365.2 0 0 3814.5 0 0 4032.6 0 0 4042.2 0 0 4358.5 0 0 4262.8 0 0 16790 0 0 3541.1 0 0 2878.9 0 0 4018 0 0 3446.5 0 0 3885.8 0 0 4048 0 0 4109.8 0 0 4865.2 0 0 4196.8 0 0 15910 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26899000 26899000 0 0 NaN 2909 1582 135 135 2630 2777 2978 3315 2978 3315 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21379 2978 3315 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21379 2978 3315 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21379 Q8WYP5 528 Q8WYP5 Q8WYP5 Protein ELYS AHCTF1 sp|Q8WYP5|ELYS_HUMAN Protein ELYS OS=Homo sapiens GN=AHCTF1 PE=1 SV=3 1 63.4154 0.0207866 63.415 46.39 63.415 1 S LIPDGYNRCLVAGLLSPRFVDVQPSSLSQEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX CLVAGLLS(1)PR CLVAGLLS(63.42)PR 8 2 -0.73316 8398.5 0 0 9217.5 0 0 8409 0 0 10102 0 0 8362.8 0 0 7762.9 0 0 7920.9 0 0 10567 0 0 11467 0 0 10481 0 0 7947.2 0 0 8712.4 0 0 8465.4 0 0 10281 0 0 8486.4 0 0 7940.4 0 0 8181.1 0 0 10807 0 0 11164 0 0 10113 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8977000 8977000 0 0 NaN 2910 1585 528 528 613 652 695 771 695 771 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20774 695 771 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20774 695 771 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20774 Q8WYP5 1944 Q8WYP5 Q8WYP5 Protein ELYS AHCTF1 sp|Q8WYP5|ELYS_HUMAN Protein ELYS OS=Homo sapiens GN=AHCTF1 PE=1 SV=3 0.938941 11.8689 0.00137805 106.18 14.311 106.18 1 S QLRIKHVRRVRGREVSPSDVREDSNLESSQL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX EVS(0.939)PS(0.061)DVR EVS(11.87)PS(-11.87)DVR 3 2 -1.4187 29053 0 0 27114 0 0 26313 0 0 26175 0 0 22406 0 0 30257 0 0 21981 0 0 25161 0 0 28195 0 0 5181.4 0 0 27482 0 0 25608 0 0 26605 0 0 26999 0 0 22968 0 0 30092 0 0 22565 0 0 25592 0 0 27556 0 0 5461.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 39232000 39232000 0 0 NaN 2911 1585 1944 1944 1222 1285 1384 1535 1384 1535 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9048 1384 1535 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9048 1384 1535 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9048 Q8WYP5 1232 Q8WYP5 Q8WYP5 Protein ELYS AHCTF1 sp|Q8WYP5|ELYS_HUMAN Protein ELYS OS=Homo sapiens GN=AHCTF1 PE=1 SV=3 1 206.659 6.99211E-11 206.66 174.27 206.66 1 S PSPGRSPQRLKETRISFVEEDVHPKWIPGAA X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPXXXXXX IS(1)FVEEDVHPK IS(206.66)FVEEDVHPK 2 3 -0.12152 15373 0 0 15183 0 0 14601 0 0 14844 0 0 14872 0 0 14630 0 0 11858 0 0 14194 0 0 17532 0 0 11191 0 0 14544 0 0 14341 0 0 14744 0 0 15259 0 0 15039 0 0 14690 0 0 12371 0 0 14592 0 0 17058 0 0 10866 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 120300000 120300000 0 0 NaN 2912 1585 1232 1232 1940 2050 2212 2473 2212 2473 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19090 2212 2473 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19090 2212 2473 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19090 Q8WYP5 1541 Q8WYP5 Q8WYP5 Protein ELYS AHCTF1 sp|Q8WYP5|ELYS_HUMAN Protein ELYS OS=Homo sapiens GN=AHCTF1 PE=1 SV=3 0.99999 50.0978 6.43212E-05 126.01 93.014 126.01 1 S EKLEAQDSGEEARNLSFNELYPSGTLKLQYN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX NLS(1)FNELYPSGTLK NLS(50.1)FNELY(-50.1)PS(-71.94)GT(-83.97)LK 3 3 0.01738 7266 0 0 7232.6 0 0 7351.2 0 0 5549.6 0 0 5970.1 0 0 8217.2 0 0 6944.6 0 0 6950.6 0 0 7318.9 0 0 12668 0 0 6875.8 0 0 6822.8 0 0 7382.2 0 0 5843.7 0 0 6154.1 0 0 8125.4 0 0 7032.4 0 0 7402.7 0 0 7205.7 0 0 12089 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26337000 26337000 0 0 NaN 2913 1585 1541 1541 2861 3032 3247 3603 3247 3603 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22417 3247 3603 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22417 3247 3603 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22417 Q8WYP5 1160 Q8WYP5 Q8WYP5 Protein ELYS AHCTF1 sp|Q8WYP5|ELYS_HUMAN Protein ELYS OS=Homo sapiens GN=AHCTF1 PE=1 SV=3 0.999248 33.7183 6.33143E-05 114.57 84.361 114.57 1 S YLVSRSLPSSSQLKGSPQAISRASELHLLET X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPXXXXXXXXX SLPSSSQLKGS(0.999)PQAISR S(-56.46)LPS(-43.58)S(-36.3)S(-33.72)QLKGS(33.72)PQAIS(-43.31)R 11 3 0.39162 23515 0 0 25880 0 0 24244 0 0 25638 0 0 18648 0 0 25155 0 0 21380 0 0 26422 0 0 26505 0 0 13345 0 0 22253 0 0 24446 0 0 24307 0 0 26331 0 0 19298 0 0 25277 0 0 21772 0 0 26857 0 0 25935 0 0 13177 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 250380000 250380000 0 0 NaN 2914 1585 1160 1160 3967 4226 4509 5011 4509 5011 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13456 4509 5011 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13456 4509 5011 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13456 Q8WYP5 1222 Q8WYP5 Q8WYP5 Protein ELYS AHCTF1 sp|Q8WYP5|ELYS_HUMAN Protein ELYS OS=Homo sapiens GN=AHCTF1 PE=1 SV=3 0.999992 50.95 1.11864E-22 256.58 221.41 256.58 1 S LRSTPLASPSPSPGRSPQRLKETRISFVEED X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X XXPPPPPPPPPPPPPPPPPXXXXXXXXXXXX STPLASPSPSPGRS(1)PQR S(-190.98)T(-187.32)PLAS(-125.17)PS(-88.12)PS(-50.95)PGRS(50.95)PQR 14 3 -0.20161 19978 0 0 16670 0 0 20907 0 0 17453 0 0 17763 0 0 21755 0 0 15813 0 0 19492 0 0 16501 0 0 4782 0 0 18908 0 0 15752 0 0 20957 0 0 17942 0 0 18184 0 0 21595 0 0 16209 0 0 19784 0 0 16253 0 0 4953.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 120400000 120400000 0 0 NaN 2915 1585 1222 1222 4514 4808 5121 5687 5121 5687 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8795 5121 5687 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8795 5121 5687 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8795 Q8WYQ4 115 Q8WYQ4 Q8WYQ4 Uncharacterized protein C22orf15 C22orf15 sp|Q8WYQ4|CV015_HUMAN Uncharacterized protein C22orf15 OS=Homo sapiens GN=C22orf15 PE=2 SV=1 0.944469 15.3168 0.0444407 42.813 13.485 42.813 1 S LDDHYPELAEELRRLSGLSSVGHNWRKRMGT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX RLS(0.944)GLS(0.028)S(0.028)VGHNWR RLS(15.32)GLS(-15.32)S(-15.32)VGHNWR 3 4 3.856 19328 0 0 19514 0 0 19631 0 0 17228 0 0 15763 0 0 17187 0 0 14582 0 0 16607 0 0 22796 0 0 3015.6 0 0 18290 0 0 18421 0 0 19700 0 0 17828 0 0 16216 0 0 17227 0 0 15125 0 0 16772 0 0 22144 0 0 3223.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 34115000 34115000 0 0 NaN 2916 1586 115 115 3325 3527 3764 4180 3764 4180 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5860 3764 4180 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5860 3764 4180 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5860 Q8WYQ5 377 Q8WYQ5 Q8WYQ5 Microprocessor complex subunit DGCR8 DGCR8 sp|Q8WYQ5|DGCR8_HUMAN Microprocessor complex subunit DGCR8 OS=Homo sapiens GN=DGCR8 PE=1 SV=1 0.999713 35.5003 2.25237E-16 230.8 200.7 230.8 1 S EEREQSSDLTPSGDVSPVKPLSRSAELEFPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPXXXXXXXX EQSSDLTPSGDVS(1)PVKPLSR EQS(-131.42)S(-122.67)DLT(-60.53)PS(-35.5)GDVS(35.5)PVKPLS(-53.68)R 13 3 -0.029396 17131 0 0 18901 0 0 17425 0 0 18216 0 0 9184.6 0 0 19137 0 0 9031.6 0 0 15534 0 0 20173 0 0 11332 0 0 16212 0 0 17852 0 0 17427 0 0 18760 0 0 9815.4 0 0 19117 0 0 9505.9 0 0 16062 0 0 19433 0 0 11030 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 40347000 40347000 0 0 NaN 2917 1587 377 377 1105 1163 1251 1375 1251 1375 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14222 1251 1375 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14222 1251 1375 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14222 Q92466 24 Q92466 Q92466 DNA damage-binding protein 2 DDB2 sp|Q92466|DDB2_HUMAN DNA damage-binding protein 2 OS=Homo sapiens GN=DDB2 PE=1 SV=1 0.5 0 8.49061E-05 117.67 91.935 117.67 1 S TQKTSEIVLRPRNKRSRSPLELEPEAKKLCA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(0.5)RS(0.5)PLELEPEAK S(0)RS(0)PLELEPEAK 1 3 0.11929 36178 0 0 24463 0 0 35122 0 0 21996 0 0 30088 0 0 38157 0 0 33047 0 0 32914 0 0 22303 0 0 3020.3 0 0 34230 0 0 23096 0 0 35370 0 0 22995 0 0 30862 0 0 37465 0 0 33203 0 0 33310 0 0 22462 0 0 3605.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 132930000 132930000 0 0 NaN 2918 1588 24 24 4291 4575 4875 5412 4875 5412 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13536 4875 5412 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13536 4875 5412 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13536 Q92466 26 Q92466 Q92466 DNA damage-binding protein 2 DDB2 sp|Q92466|DDB2_HUMAN DNA damage-binding protein 2 OS=Homo sapiens GN=DDB2 PE=1 SV=1 0.5 0 8.49061E-05 117.67 91.935 117.67 1 S KTSEIVLRPRNKRSRSPLELEPEAKKLCAKG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.5)RS(0.5)PLELEPEAK S(0)RS(0)PLELEPEAK 3 3 0.11929 36178 0 0 24463 0 0 35122 0 0 21996 0 0 30088 0 0 38157 0 0 33047 0 0 32914 0 0 22303 0 0 3020.3 0 0 34230 0 0 23096 0 0 35370 0 0 22995 0 0 30862 0 0 37465 0 0 33203 0 0 33310 0 0 22462 0 0 3605.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 132930000 132930000 0 0 NaN 2919 1588 26 26 4291 4575 4875 5412 4875 5412 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13536 4875 5412 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13536 4875 5412 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13536 Q92499 481 Q92499 Q92499 ATP-dependent RNA helicase DDX1 DDX1 sp|Q92499|DDX1_HUMAN ATP-dependent RNA helicase DDX1 OS=Homo sapiens GN=DDX1 PE=1 SV=2 0.999937 43.1115 5.68404E-11 189.2 151.96 189.2 1 S TDDVHAKDNTRPGANSPEMWSEAIKILKGEY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPXXXXXX DNTRPGANS(1)PEMWSEAIK DNT(-48.54)RPGANS(43.11)PEMWS(-43.11)EAIK 9 3 -0.010813 28918 0 0 25468 0 0 31111 0 0 24990 0 0 25574 0 0 30181 0 0 23394 0 0 29073 0 0 24980 0 0 28162 0 0 27372 0 0 24056 0 0 31129 0 0 25771 0 0 26250 0 0 30059 0 0 23961 0 0 30054 0 0 24581 0 0 27190 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 41314000 41314000 0 0 NaN 2920 1589 481 481 772 818;819 873;874 964;965 874 965 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16990 874 965 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16990 874 965 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16990 Q92502 233 Q92502 Q92502 StAR-related lipid transfer protein 8 STARD8 sp|Q92502|STAR8_HUMAN StAR-related lipid transfer protein 8 OS=Homo sapiens GN=STARD8 PE=1 SV=2 0.570105 1.24029 4.28746E-05 130.29 113.77 130.29 1 S LVHVPGDHKPGTFPRSLSIESLCPEDGHRLA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPXX S(0.57)LS(0.428)IES(0.001)LCPEDGHR S(1.24)LS(-1.24)IES(-26.04)LCPEDGHR 1 3 -0.72696 3751.7 0 0 5010.1 0 0 4721.7 0 0 6052.1 0 0 4455.8 0 0 3678.4 0 0 4286 0 0 5223.2 0 0 5646.1 0 0 4749.4 0 0 3553.7 0 0 4738.8 0 0 4695.2 0 0 6112.3 0 0 4536.4 0 0 3821.3 0 0 4408.2 0 0 5322.5 0 0 5513.3 0 0 4593 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12073000 12073000 0 0 NaN 2921 1590 233 233 3987 4251 4538 5046 4538 5046 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15967 4538 5046 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15967 4538 5046 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15967 Q92504 293 Q92504 Q92504 Zinc transporter SLC39A7 SLC39A7 sp|Q92504|S39A7_HUMAN Zinc transporter SLC39A7 OS=Homo sapiens GN=SLC39A7 PE=1 SV=2 0.850101 7.53672 0.0350932 58.596 26.662 58.596 1 S EEEKETRGVQKRRGGSTVPKDGPVRPQNAEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX GGS(0.85)T(0.15)VPK GGS(7.54)T(-7.54)VPK 3 2 -0.033307 28937 0 0 27027 0 0 30771 0 0 26907 0 0 29682 0 0 27569 0 0 30815 0 0 29187 0 0 26498 0 0 2671.3 0 0 27389 0 0 25531 0 0 30868 0 0 27646 0 0 30198 0 0 27629 0 0 31195 0 0 29295 0 0 26329 0 0 3190.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 109880000 109880000 0 0 NaN 2922 1591 293 293 1458;3244 1535;3441 1657 1837 1657 1837 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7668 1657 1837 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7668 1657 1837 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7668 Q92508 1621 Q92508 Q92508 Piezo-type mechanosensitive ion channel component 1 PIEZO1 sp|Q92508|PIEZ1_HUMAN Piezo-type mechanosensitive ion channel component 1 OS=Homo sapiens GN=PIEZO1 PE=1 SV=4 0.989785 19.8899 2.04595E-10 181.76 158.66 181.76 1 S DMGSPLSTGYHTRSGSEEAVTDPGEREAGAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX S(0.01)GS(0.99)EEAVTDPGER S(-19.89)GS(19.89)EEAVT(-41.98)DPGER 3 2 -0.071829 7716.5 0 0 10234 0 0 7171.5 0 0 10960 0 0 15671 0 0 7823.3 0 0 15060 0 0 10262 0 0 9474 0 0 3254.8 0 0 7299.7 0 0 9671.6 0 0 7355.5 0 0 11158 0 0 15387 0 0 8018.3 0 0 15206 0 0 10297 0 0 9584.9 0 0 3302.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20696000 20696000 0 0 NaN 2923 1592 1621 1621 3802 4050 4321 4801 4321 4801 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7635 4321 4801 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7635 4321 4801 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7635 Q92508 1646 Q92508 Q92508 Piezo-type mechanosensitive ion channel component 1 PIEZO1 sp|Q92508|PIEZ1_HUMAN Piezo-type mechanosensitive ion channel component 1 OS=Homo sapiens GN=PIEZO1 PE=1 SV=4 0.656311 2.80944 3.53938E-06 161.22 105.38 161.22 1 S REAGASLYQGLMRTASELLLDRRLRIPELEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX T(0.344)AS(0.656)ELLLDR T(-2.81)AS(2.81)ELLLDR 3 2 0.11226 28042 0 0 27799 0 0 29156 0 0 28682 0 0 44066 0 0 27377 0 0 45582 0 0 35836 0 0 30763 0 0 10218 0 0 26539 0 0 26266 0 0 29480 0 0 29375 0 0 43845 0 0 27625 0 0 45919 0 0 35926 0 0 30982 0 0 10450 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 81958000 81958000 0 0 NaN 2924 1592 1646 1646 4624;4625 4932;4933 5254;5255 5836;5837 5254 5836 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17918 5254 5836 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17918 5254 5836 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17918 Q92522 31 Q92522 Q92522 Histone H1x H1FX sp|Q92522|H1X_HUMAN Histone H1x OS=Homo sapiens GN=H1FX PE=1 SV=1 0.999305 32.438 4.88567E-07 163.09 119.79 163.09 1 S GMAKKVTKAGGSAALSPSKKRKNSKKKNQPG X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX AGGSAALS(0.999)PS(0.001)K AGGS(-39.03)AALS(32.44)PS(-32.44)K 8 2 -0.37956 105030 0 0 169720 0 0 101190 0 0 177080 0 0 115560 0 0 105520 0 0 117570 0 0 141300 0 0 207020 0 0 8296.8 0 0 99375 0 0 160370 0 0 102290 0 0 180230 0 0 116530 0 0 109430 0 0 122030 0 0 140600 0 0 200470 0 0 11083 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 1156100000 1156100000 0 0 NaN 2925 1594 31 31 205;206 215;216 233;234 261;262 233 261 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9911 233 261 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9911 233 261 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9911 Q92522 2 Q92522 Q92522 Histone H1x H1FX sp|Q92522|H1X_HUMAN Histone H1x OS=Homo sapiens GN=H1FX PE=1 SV=1 1 91.918 2.11722E-16 141.38 123.57 141.38 1 S ______________MSVELEEALPVTTAEGM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M) XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(1)VELEEALPVTTAEGMAK S(91.92)VELEEALPVT(-91.92)T(-99.32)AEGMAK 1 2 0.23155 14638 0 0 42093 0 0 20420 0 0 40211 0 0 88160 0 0 17355 0 0 89751 0 0 67378 0 0 40831 0 0 376130 0 0 13873 0 0 39753 0 0 21062 0 0 41035 0 0 85442 0 0 19751 0 0 89943 0 0 76980 0 0 42362 0 0 355730 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 131720000 131720000 0 0 NaN 2926 1594 2 2 4551 4854;4855 5171;5172 5741;5742;5743;5744 5172 5743 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23583 5172 5743 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23583 5172 5743 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23583 Q92530 152 Q92530 Q92530 Proteasome inhibitor PI31 subunit PSMF1 sp|Q92530|PSMF1_HUMAN Proteasome inhibitor PI31 subunit OS=Homo sapiens GN=PSMF1 PE=1 SV=2 0.499987 0 0.0118781 68.639 54.065 66.636 1 S GIITPIHEQWEKANVSSPHREFPPATAREVD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPXXX ANVS(0.5)S(0.5)PHREFPPATAR ANVS(0)S(0)PHREFPPAT(-42.98)AR 4 3 0.33193 25001 0 0 27307 0 0 23183 0 0 28862 0 0 33172 0 0 27530 0 0 37439 0 0 33612 0 0 32058 0 0 10503 0 0 23650 0 0 25804 0 0 23579 0 0 29518 0 0 33129 0 0 27750 0 0 37758 0 0 33796 0 0 31860 0 0 10668 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 30311000 30311000 0 0 NaN 2927 1595 152 152 348 374 405;406 446;447 406 447 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8850 405 446 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8684 405 446 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8684 Q92530 153 Q92530 Q92530 Proteasome inhibitor PI31 subunit PSMF1 sp|Q92530|PSMF1_HUMAN Proteasome inhibitor PI31 subunit OS=Homo sapiens GN=PSMF1 PE=1 SV=2 0.499987 0 0.0118781 68.639 54.065 66.636 1 S IITPIHEQWEKANVSSPHREFPPATAREVDP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ANVS(0.5)S(0.5)PHREFPPATAR ANVS(0)S(0)PHREFPPAT(-42.98)AR 5 3 0.33193 25001 0 0 27307 0 0 23183 0 0 28862 0 0 33172 0 0 27530 0 0 37439 0 0 33612 0 0 32058 0 0 10503 0 0 23650 0 0 25804 0 0 23579 0 0 29518 0 0 33129 0 0 27750 0 0 37758 0 0 33796 0 0 31860 0 0 10668 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 30311000 30311000 0 0 NaN 2928 1595 153 153 348 374 405;406 446;447 406 447 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8850 405 446 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8684 405 446 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8684 Q92530 252 Q92530 Q92530 Proteasome inhibitor PI31 subunit PSMF1 sp|Q92530|PSMF1_HUMAN Proteasome inhibitor PI31 subunit OS=Homo sapiens GN=PSMF1 PE=1 SV=2 0.8553 7.7165 9.66506E-05 106.09 94.121 106.09 1 S VPPGARFDPFGPIGTSPPGPNPDHLPPPGYD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPPPPPP FDPFGPIGT(0.145)S(0.855)PPGPNPDHLPPPGYDDMYL FDPFGPIGT(-7.72)S(7.72)PPGPNPDHLPPPGY(-80.09)DDMY(-93.1)L 10 3 1.7829 2985.1 0 0 4393 0 0 3241.8 0 0 3538.8 0 0 3014.3 0 0 3590.2 0 0 3814.8 0 0 5115.2 0 0 4214.3 0 0 57555 0 0 2825.6 0 0 4145.1 0 0 3248.3 0 0 3686.5 0 0 3084 0 0 3723.8 0 0 3855.6 0 0 6806.1 0 0 4141.3 0 0 54313 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11887000 11887000 0 0 NaN 2929 1595 252 252 1246 1311 1412 1565 1412 1565 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24102 1412 1565 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24102 1412 1565 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24102 Q92538 1784 Q92538 Q92538 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 GBF1 sp|Q92538|GBF1_HUMAN Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 OS=Homo sapiens GN=GBF1 PE=1 SV=2 0.96365 17.2809 1.03929E-22 270.74 244.08 270.74 1 S EKPESPRAASSSSPGSPVASSPSRLSPTPDG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPXXXXXXX AASSS(0.018)S(0.018)PGS(0.964)PVASSPSR AAS(-61.18)S(-35.03)S(-17.28)S(-17.28)PGS(17.28)PVAS(-70.74)S(-106.84)PS(-136.87)R 9 2 -0.052008 4036.7 0 0 2884.7 0 0 3907.3 0 0 3257.1 0 0 3745.5 0 0 2666.9 0 0 5636.4 0 0 4784.1 0 0 2600.1 0 0 1403.7 0 0 3819.3 0 0 2727.2 0 0 3943.5 0 0 3312.1 0 0 3834.4 0 0 2728.7 0 0 5563.4 0 0 4759.1 0 0 2694.3 0 0 1432.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6602100 6602100 0 0 NaN 2930 1596 1784 1784 80 85 93 106 93 106 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6670 93 106 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6670 93 106 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6670 Q92538 1318 Q92538 Q92538 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 GBF1 sp|Q92538|GBF1_HUMAN Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 OS=Homo sapiens GN=GBF1 PE=1 SV=2 0.86255 7.9956 5.52553E-16 227.06 201.23 227.06 1 S PSYHQNDVSLDRGYTSDSEVYTDHGRPGKIH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPXX GYT(0.137)S(0.863)DS(0.001)EVYTDHGRPGK GY(-125.16)T(-8)S(8)DS(-31.53)EVY(-133.63)T(-80.28)DHGRPGK 4 3 0.51236 32011 0 0 28574 0 0 33703 0 0 25431 0 0 28641 0 0 34986 0 0 35891 0 0 34387 0 0 27770 0 0 8019.5 0 0 30297 0 0 26975 0 0 33791 0 0 26457 0 0 29459 0 0 34649 0 0 35963 0 0 34758 0 0 27745 0 0 8347.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 49772000 49772000 0 0 NaN 2931 1596 1318 1318 1688 1780 1922 2140 1922 2140 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10007 1922 2140 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10007 1922 2140 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10007 Q92538 1335 Q92538 Q92538 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 GBF1 sp|Q92538|GBF1_HUMAN Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 OS=Homo sapiens GN=GBF1 PE=1 SV=2 0.5 0 2.42586E-07 154.6 135.02 154.6 1 S SEVYTDHGRPGKIHRSATDADVVNSGWLVVG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.5)AT(0.5)DADVVNSGWLVVGK S(0)AT(0)DADVVNS(-75.91)GWLVVGK 1 3 -0.14127 3197.2 0 0 3727.6 0 0 3827.2 0 0 2669.1 0 0 3013.1 0 0 3481.1 0 0 3450.7 0 0 4469.5 0 0 3322.2 0 0 34719 0 0 3027.7 0 0 3515.3 0 0 3808.4 0 0 2818.2 0 0 3111.8 0 0 3530.8 0 0 3488 0 0 5491.1 0 0 3283.4 0 0 32796 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 4845300 4845300 0 0 NaN 2932 1596 1335 1335 3631 3860 4113 4570 4113 4570 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22952 4113 4570 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22952 4113 4570 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22952 Q92541 697 Q92541 Q92541 RNA polymerase-associated protein RTF1 homolog RTF1 sp|Q92541|RTF1_HUMAN RNA polymerase-associated protein RTF1 homolog OS=Homo sapiens GN=RTF1 PE=1 SV=4 0.999999 60.632 0.00788032 79.875 35.259 79.875 1 S ITSKAPPAKDGAPRRSLNLEDYKKRRGLI__ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(1)LNLEDYKK S(60.63)LNLEDY(-60.63)KK 1 3 -0.035013 27909 0 0 34215 0 0 26252 0 0 33351 0 0 34282 0 0 29792 0 0 33870 0 0 32373 0 0 35214 0 0 28351 0 0 26402 0 0 32317 0 0 26627 0 0 34239 0 0 34311 0 0 30106 0 0 34533 0 0 33227 0 0 34689 0 0 27445 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 22542000 22542000 0 0 NaN 2933 1597 697 697 3953;3954 4212;4213 4495;4496 4997;4998 4496 4998 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17005 4496 4998 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17005 4496 4998 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17005 Q92556 342 Q92556 Q92556 Engulfment and cell motility protein 1 ELMO1 sp|Q92556|ELMO1_HUMAN Engulfment and cell motility protein 1 OS=Homo sapiens GN=ELMO1 PE=1 SV=2 0.721996 4.42495 2.32672E-08 172.42 149.78 172.42 1 S LRRIAFDAESEPNNSSGSMEKRKSMYTRDYK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPXXXXXXXXX IAFDAESEPNNS(0.017)S(0.722)GS(0.261)MEKR IAFDAES(-81.18)EPNNS(-16.19)S(4.42)GS(-4.42)MEKR 13 3 -0.14403 14378 0 0 7495.6 0 0 14543 0 0 6956.1 0 0 21868 0 0 13351 0 0 23084 0 0 17414 0 0 7752.7 0 0 16690 0 0 13606 0 0 7077.8 0 0 14727 0 0 7278 0 0 21762 0 0 13179 0 0 23019 0 0 17813 0 0 8299.8 0 0 16119 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18273000 18273000 0 0 NaN 2934 1599 342 342 1771;1772 1870;1871 2018 2249 2018 2249 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14611 2018 2249 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14611 2018 2249 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14611 Q92556 344 Q92556 Q92556 Engulfment and cell motility protein 1 ELMO1 sp|Q92556|ELMO1_HUMAN Engulfment and cell motility protein 1 OS=Homo sapiens GN=ELMO1 PE=1 SV=2 0.936429 11.7186 1.72024E-07 150.83 133.61 150.83 1 S RIAFDAESEPNNSSGSMEKRKSMYTRDYKKL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX IAFDAESEPNNS(0.001)S(0.063)GS(0.936)MEK IAFDAES(-106.26)EPNNS(-32.46)S(-11.72)GS(11.72)MEK 15 3 0.54861 8009.1 0 0 3207.1 0 0 9711.3 0 0 4417.1 0 0 15006 0 0 9320.3 0 0 17464 0 0 10909 0 0 5078 0 0 16942 0 0 7585.1 0 0 3036.5 0 0 9750.4 0 0 4540.3 0 0 14938 0 0 9175.2 0 0 17320 0 0 11392 0 0 5535.8 0 0 16206 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26026000 26026000 0 0 NaN 2935 1599 344 344 1771;1772 1870;1871 2017 2248 2017 2248 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16782 2017 2248 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16782 2017 2248 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16782 Q92560 583 Q92560 Q92560 Ubiquitin carboxyl-terminal hydrolase BAP1 BAP1 sp|Q92560|BAP1_HUMAN Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Homo sapiens GN=BAP1 PE=1 SV=2 0.984181 19.2222 1.03088E-07 147.69 125.06 147.69 2 S GVLSPLALTEGGKGSSPSIRPIQGSQGSSSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP GS(0.015)S(0.984)PSIRPIQGS(0.004)QGS(0.167)S(0.644)S(0.186)PVEK GS(-19.22)S(19.22)PS(-33.36)IRPIQGS(-22.28)QGS(-5.88)S(5.48)S(-5.48)PVEK 3 3 0.1908 0 13273 0 0 17564 0 0 14194 0 0 15457 0 0 10916 0 0 13897 0 0 10575 0 0 14141 0 0 18946 0 0 8085 0 0 12563 0 0 16580 0 0 14199 0 0 15975 0 0 11274 0 0 14017 0 0 11010 0 0 14418 0 0 18339 0 0 7940.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 18176000 0 18176000 0 NaN 2936 1600 583 583 1638 1725 1864 2077 1864 2077 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12282 1864 2077 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12282 1864 2077 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12282 Q92560 596 Q92560 Q92560 Ubiquitin carboxyl-terminal hydrolase BAP1 BAP1 sp|Q92560|BAP1_HUMAN Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Homo sapiens GN=BAP1 PE=1 SV=2 0.643798 5.47566 1.03088E-07 147.69 125.06 147.69 2 S GSSPSIRPIQGSQGSSSPVEKEVVEATDSRE X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX GS(0.015)S(0.984)PSIRPIQGS(0.004)QGS(0.167)S(0.644)S(0.186)PVEK GS(-19.22)S(19.22)PS(-33.36)IRPIQGS(-22.28)QGS(-5.88)S(5.48)S(-5.48)PVEK 16 3 0.1908 0 13273 0 0 17564 0 0 14194 0 0 15457 0 0 10916 0 0 13897 0 0 10575 0 0 14141 0 0 18946 0 0 8085 0 0 12563 0 0 16580 0 0 14199 0 0 15975 0 0 11274 0 0 14017 0 0 11010 0 0 14418 0 0 18339 0 0 7940.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 18176000 0 18176000 0 NaN 2937 1600 596 596 1638 1725 1864 2077 1864 2077 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12282 1864 2077 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12282 1864 2077 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12282 Q92560 292 Q92560 Q92560 Ubiquitin carboxyl-terminal hydrolase BAP1 BAP1 sp|Q92560|BAP1_HUMAN Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Homo sapiens GN=BAP1 PE=1 SV=2 0.565748 2.02818 0.00462206 88.755 67.221 88.755 1 S QESQLPEESKSASNKSPLVLEANRAPAASEG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPXXXXXXX S(0.08)AS(0.355)NKS(0.566)PLVLEANR S(-8.52)AS(-2.03)NKS(2.03)PLVLEANR 6 3 0.0098349 16139 0 0 18899 0 0 16111 0 0 20087 0 0 14222 0 0 16212 0 0 15072 0 0 17360 0 0 19866 0 0 5696.5 0 0 15271 0 0 17860 0 0 16203 0 0 20489 0 0 14561 0 0 16448 0 0 15432 0 0 17541 0 0 19399 0 0 5765.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14152000 14152000 0 0 NaN 2938 1600 292 292 3611 3838 4091 4548 4091 4548 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12598 4091 4548 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12598 4091 4548 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12598 Q92574 505 Q92574 Q92574 Hamartin TSC1 sp|Q92574|TSC1_HUMAN Hamartin OS=Homo sapiens GN=TSC1 PE=1 SV=2 0.999908 40.3654 0.00171526 99.283 63.771 99.283 1 S TTAEAEPVVPRGGFDSPFYRDSLPGSQRKTH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX GGFDS(1)PFYR GGFDS(40.37)PFY(-40.37)R 5 2 -0.24212 11640 0 0 10621 0 0 10712 0 0 10889 0 0 13546 0 0 10929 0 0 14795 0 0 13089 0 0 11815 0 0 8803.2 0 0 11011 0 0 10035 0 0 10877 0 0 11165 0 0 13594 0 0 10996 0 0 14919 0 0 13311 0 0 11784 0 0 8592.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14113000 14113000 0 0 NaN 2939 1601 505 505 1431 1508 1617 1787 1617 1787 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16643 1617 1787 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16643 1617 1787 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16643 Q92576 283 Q92576 Q92576 PHD finger protein 3 PHF3 sp|Q92576|PHF3_HUMAN PHD finger protein 3 OS=Homo sapiens GN=PHF3 PE=1 SV=3 1 123.291 0.000111118 123.29 95.278 123.29 1 S KKNEALMECKAKPVGSPLFKFSDKEEHEQND X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX AKPVGS(1)PLFK AKPVGS(123.29)PLFK 6 3 0.69522 14151 0 0 11942 0 0 13723 0 0 10927 0 0 8806.8 0 0 16780 0 0 10688 0 0 11134 0 0 12485 0 0 5115.8 0 0 13389 0 0 11275 0 0 13786 0 0 11376 0 0 9255.8 0 0 16497 0 0 10838 0 0 11541 0 0 12243 0 0 5074.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 35703000 35703000 0 0 NaN 2940 1602 283 283 271 292 313 348 313 348 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16453 313 348 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16453 313 348 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16453 Q92576 125 Q92576 Q92576 PHD finger protein 3 PHF3 sp|Q92576|PHF3_HUMAN PHD finger protein 3 OS=Homo sapiens GN=PHF3 PE=1 SV=3 0.99913 30.6003 0.000203581 107.63 85.095 107.63 1 S PNRNLRDKVEENSVRSPRKSPRLMAQEQVRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX DKVEENS(0.001)VRS(0.999)PR DKVEENS(-30.6)VRS(30.6)PR 10 3 -0.93616 26340 0 0 15372 0 0 21702 0 0 17450 0 0 12715 0 0 24644 0 0 12483 0 0 17605 0 0 18136 0 0 3271.8 0 0 24907 0 0 14534 0 0 22009 0 0 17906 0 0 13436 0 0 24299 0 0 12872 0 0 18030 0 0 17655 0 0 3488.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 61029000 61029000 0 0 NaN 2941 1602 125 125 723 767 818 904 818 904 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6870 818 904 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6870 818 904 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6870 Q92576 1133 Q92576 Q92576 PHD finger protein 3 PHF3 sp|Q92576|PHF3_HUMAN PHD finger protein 3 OS=Homo sapiens GN=PHF3 PE=1 SV=3 1 178.836 3.60348E-10 178.84 135.24 178.84 1 S CKICIGRMAPPVDDLSPKKVKVVVGVARKHS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX MAPPVDDLS(1)PK MAPPVDDLS(178.84)PK 9 3 -0.76525 8317.7 0 0 7028.4 0 0 8449.4 0 0 6578.5 0 0 5292.8 0 0 8067.7 0 0 5683.9 0 0 7699.3 0 0 6582.7 0 0 2405.2 0 0 7871.2 0 0 6637 0 0 8462.6 0 0 6806 0 0 5563.9 0 0 8020.1 0 0 5791.5 0 0 7809.7 0 0 6457.1 0 0 2443 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26341000 26341000 0 0 NaN 2942 1602 1133 1133 2666 2816 3021 3366 3021 3366 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16762 3021 3366 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16762 3021 3366 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16762 Q92576 1614 Q92576 Q92576 PHD finger protein 3 PHF3 sp|Q92576|PHF3_HUMAN PHD finger protein 3 OS=Homo sapiens GN=PHF3 PE=1 SV=3 0.980171 16.9401 7.73871E-17 219.82 208.29 219.82 1 S EDQENNLQDNQTSNSSPCRSNVGKGNIDGNV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX QLQEDQENNLQDNQTSNS(0.02)S(0.98)PCR QLQEDQENNLQDNQT(-68.68)S(-64.32)NS(-16.94)S(16.94)PCR 19 3 -0.4721 6459.4 0 0 4044.3 0 0 7528.6 0 0 4567.8 0 0 6279.9 0 0 6471.5 0 0 6462.7 0 0 6315.3 0 0 5068.8 0 0 2286.7 0 0 6116.2 0 0 3823.5 0 0 7504.4 0 0 4688.7 0 0 6447.8 0 0 6404.1 0 0 6531.5 0 0 6409.6 0 0 5060.5 0 0 2299.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27802000 27802000 0 0 NaN 2943 1602 1614 1614 3069 3255 3483 3859 3483 3859 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9243 3483 3859 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9243 3483 3859 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9243 Q92576 1758 Q92576 Q92576 PHD finger protein 3 PHF3 sp|Q92576|PHF3_HUMAN PHD finger protein 3 OS=Homo sapiens GN=PHF3 PE=1 SV=3 0.715655 7.02199 0.00507885 88.395 69.992 88.395 1 S ILMQNIETVHPFRRGSAVATSHFEVGNTCPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RGS(0.716)AVAT(0.142)S(0.142)HFEVGNTCPSEFPSK RGS(7.02)AVAT(-7.02)S(-7.02)HFEVGNT(-35.49)CPS(-62.39)EFPS(-85.92)K 3 4 0.78906 10856 0 0 10016 0 0 12246 0 0 8923 0 0 9896.2 0 0 12804 0 0 10165 0 0 11971 0 0 10654 0 0 35810 0 0 10278 0 0 9455.1 0 0 12222 0 0 9290.9 0 0 10186 0 0 12718 0 0 10348 0 0 13119 0 0 10492 0 0 33997 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21890000 21890000 0 0 NaN 2944 1602 1758 1758 3249 3446 3682 4085 3682 4085 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14629 3682 4085 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14629 3682 4085 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14629 Q92576 1642 Q92576 Q92576 PHD finger protein 3 PHF3 sp|Q92576|PHF3_HUMAN PHD finger protein 3 OS=Homo sapiens GN=PHF3 PE=1 SV=3 1 120.77 0.000463501 120.77 68.19 120.77 1 S GNVSCSENLVANTARSPQFINLKRDPRQAAG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX S(1)PQFINLK S(120.77)PQFINLK 1 3 -0.069456 8137 0 0 7477 0 0 6551.3 0 0 5986.1 0 0 5695.2 0 0 8036.7 0 0 5656.4 0 0 5716.9 0 0 6688.5 0 0 1626.8 0 0 7693.8 0 0 7054.7 0 0 6677.4 0 0 6270.3 0 0 5830.5 0 0 7938.1 0 0 5787.9 0 0 5873.3 0 0 6555.8 0 0 1664.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8315600 8315600 0 0 NaN 2945 1602 1642 1642 4153 4427 4718 5237 4718 5237 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18759 4718 5237 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18759 4718 5237 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18759 Q92576 1184 Q92576 Q92576 PHD finger protein 3 PHF3 sp|Q92576|PHF3_HUMAN PHD finger protein 3 OS=Homo sapiens GN=PHF3 PE=1 SV=3 0.977092 16.979 3.98634E-05 120.93 100.96 120.93 1 S EFFEEEKQESPKSTFSPAPRPEMPGTVEVES X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP S(0.003)T(0.02)FS(0.977)PAPRPEMPGTVEVESTFLAR S(-24.69)T(-16.98)FS(16.98)PAPRPEMPGT(-70.97)VEVES(-90.33)T(-90.33)FLAR 4 3 -0.97464 3057.5 0 0 4721 0 0 5522.4 0 0 3769.3 0 0 3817 0 0 5247.6 0 0 3351.7 0 0 4150.6 0 0 4580.8 0 0 22103 0 0 2902.4 0 0 4454.3 0 0 5397.2 0 0 3952.1 0 0 3968.8 0 0 5221.8 0 0 3467.8 0 0 4871.9 0 0 4467.7 0 0 20908 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9370100 9370100 0 0 NaN 2946 1602 1184 1184 4503 4796 5108 5673 5108 5673 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21453 5108 5673 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21453 5108 5673 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21453 Q92597 330 Q92597 Q92597 Protein NDRG1 NDRG1 sp|Q92597|NDRG1_HUMAN Protein NDRG1 OS=Homo sapiens GN=NDRG1 PE=1 SV=1 0.9795 19.8046 9.65085E-34 325.27 273.27 325.27 1 S MPSASMTRLMRSRTASGSSVTSLDGTRSRSH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX T(0.01)AS(0.979)GS(0.01)SVTSLDGTR T(-19.8)AS(19.8)GS(-19.8)S(-50.59)VT(-77.05)S(-91.23)LDGT(-183.19)R 3 2 0.13755 56271 0 0 11073 0 0 56461 0 0 12479 0 0 16929 0 0 59044 0 0 17918 0 0 29951 0 0 13890 0 0 9922.9 0 0 53248 0 0 10469 0 0 56360 0 0 13476 0 0 19524 0 0 56759 0 0 18082 0 0 31469 0 0 13876 0 0 10037 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 44413000 44413000 0 0 NaN 2947 1603 330 330 4631 4940 5262 5845 5262 5845 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10519 5262 5845 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10519 5262 5845 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10519 Q92598 809 Q92598 Q92598 Heat shock protein 105 kDa HSPH1 sp|Q92598|HS105_HUMAN Heat shock protein 105 kDa OS=Homo sapiens GN=HSPH1 PE=1 SV=1 1 97.7788 0.00209629 97.779 50.22 97.779 1 S NTCEPVVTQPKPKIESPKLERTPNGPNIDKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX IES(1)PKLER IES(97.78)PKLER 3 3 -0.40546 70848 0 0 48331 0 0 70259 0 0 44279 0 0 22019 0 0 64007 0 0 23160 0 0 45401 0 0 45633 0 0 2991.9 0 0 67038 0 0 45633 0 0 70193 0 0 46028 0 0 25230 0 0 63049 0 0 24135 0 0 46352 0 0 44073 0 0 3868 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 1160200000 1160200000 0 0 NaN 2948 1604 809 809 1825 1926 2080 2330;2331 2080 2330 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11238 2080 2330 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11238 2080 2330 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11238 Q92608 1784 Q92608 Q92608 Dedicator of cytokinesis protein 2 DOCK2 sp|Q92608|DOCK2_HUMAN Dedicator of cytokinesis protein 2 OS=Homo sapiens GN=DOCK2 PE=1 SV=2 0.998988 29.9441 0.00016537 110.33 85.919 110.33 1 S AGIPGLDEANTSPRLSQTFLQLSDGDKKTLT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPXXX LS(0.999)QT(0.001)FLQLSDGDKK LS(29.94)QT(-29.94)FLQLS(-62.57)DGDKK 2 3 -0.0055761 9340.4 0 0 3407.5 0 0 10140 0 0 4127.3 0 0 8349.5 0 0 10306 0 0 10065 0 0 9700.5 0 0 3533.4 0 0 17546 0 0 8841.4 0 0 3223 0 0 10146 0 0 4293.1 0 0 8596.9 0 0 10080 0 0 9983.8 0 0 10282 0 0 3763.4 0 0 16746 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6233100 6233100 0 0 NaN 2949 1605 1784 1784 2585 2729 2927 3261 2927 3261 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21892 2927 3261 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21892 2927 3261 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21892 Q92608 1705 Q92608 Q92608 Dedicator of cytokinesis protein 2 DOCK2 sp|Q92608|DOCK2_HUMAN Dedicator of cytokinesis protein 2 OS=Homo sapiens GN=DOCK2 PE=1 SV=2 0.611372 1.96772 0.000303065 102.38 53.01 102.38 1 S LPEVKLRRSKKRTKRSSVVFADEKAAAESDL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPXXXXXXX RS(0.611)S(0.389)VVFADEK RS(1.97)S(-1.97)VVFADEK 2 3 0.49279 37628 0 0 24619 0 0 41542 0 0 22809 0 0 41362 0 0 39726 0 0 43022 0 0 37028 0 0 22694 0 0 2784.7 0 0 35620 0 0 23246 0 0 41606 0 0 23802 0 0 41989 0 0 39036 0 0 43156 0 0 37330 0 0 23254 0 0 3479.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 42916000 42916000 0 0 NaN 2950 1605 1705 1705 3511;4493 3728;4785 3974 4413 3974 4413 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12395 3974 4413 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12395 3974 4413 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12395 Q92608 1706 Q92608 Q92608 Dedicator of cytokinesis protein 2 DOCK2 sp|Q92608|DOCK2_HUMAN Dedicator of cytokinesis protein 2 OS=Homo sapiens GN=DOCK2 PE=1 SV=2 0.844068 7.33442 3.53803E-09 189.87 137.32 189.87 1 S PEVKLRRSKKRTKRSSVVFADEKAAAESDLK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPXXXXXXXX S(0.156)S(0.844)VVFADEK S(-7.33)S(7.33)VVFADEK 2 2 1.1808 33214 0 0 17024 0 0 30179 0 0 13385 0 0 60791 0 0 29172 0 0 63867 0 0 39140 0 0 12497 0 0 12742 0 0 31418 0 0 16062 0 0 30944 0 0 14219 0 0 59878 0 0 28685 0 0 63457 0 0 39258 0 0 14509 0 0 12904 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 66059000 66059000 0 0 NaN 2951 1605 1706 1706 3511;4493 3728;4785 5096 5655 5096 5655 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15631 5096 5655 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15631 5096 5655 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15631 Q92608 587 Q92608 Q92608 Dedicator of cytokinesis protein 2 DOCK2 sp|Q92608|DOCK2_HUMAN Dedicator of cytokinesis protein 2 OS=Homo sapiens GN=DOCK2 PE=1 SV=2 0.961619 17.531 6.4864E-16 232.22 194.99 232.22 1 S RHHVENKGATLSRSSSSVGGLSVSSRDVFSI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX S(0.011)S(0.011)S(0.962)S(0.017)VGGLSVSSR S(-19.54)S(-19.54)S(17.53)S(-17.53)VGGLS(-104.37)VS(-137.2)S(-157.95)R 3 2 -0.85059 46764 0 0 17114 0 0 49292 0 0 19679 0 0 46302 0 0 52078 0 0 51532 0 0 40532 0 0 20267 0 0 69301 0 0 44260 0 0 16181 0 0 49462 0 0 20569 0 0 47209 0 0 50740 0 0 51348 0 0 43193 0 0 21323 0 0 66194 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 50847000 50847000 0 0 NaN 2952 1605 587 587 4470 4761 5067 5622 5067 5622 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11049 5067 5622 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11049 5067 5622 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11049 Q92608 1685 Q92608 Q92608 Dedicator of cytokinesis protein 2 DOCK2 sp|Q92608|DOCK2_HUMAN Dedicator of cytokinesis protein 2 OS=Homo sapiens GN=DOCK2 PE=1 SV=2 0.999986 48.6642 3.24707E-07 147.35 123.87 147.35 1 S LASPKTPRVEQEEPISPGSTLPEVKLRRSKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPXXXXXX VEQEEPIS(1)PGSTLPEVK VEQEEPIS(48.66)PGS(-48.66)T(-67.41)LPEVK 8 3 0.24448 13023 0 0 6365.3 0 0 11544 0 0 7665.7 0 0 13930 0 0 13036 0 0 14758 0 0 11291 0 0 6615.4 0 0 11446 0 0 12318 0 0 6020.5 0 0 11740 0 0 7877.8 0 0 13999 0 0 12826 0 0 14760 0 0 11738 0 0 6872.8 0 0 11039 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 82035000 82035000 0 0 NaN 2953 1605 1685 1685 5099 5436 5789 6434 5789 6434 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18206 5789 6434 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18206 5789 6434 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18206 Q92609 554 Q92609 Q92609 TBC1 domain family member 5 TBC1D5 sp|Q92609|TBCD5_HUMAN TBC1 domain family member 5 OS=Homo sapiens GN=TBC1D5 PE=1 SV=1 0.975639 16.0312 0.0239656 80.706 54.347 80.706 1 S SPSVESLPGGREFTGSPPSSATKKDSFFSNI X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX EFT(0.024)GS(0.976)PPSSATK EFT(-16.03)GS(16.03)PPS(-45.8)S(-53.74)AT(-66.02)K 5 3 0.99422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2954 1606 554 554 946;947 1000;1001 1085 1198 1085 1198 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12321 1085 1198 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12321 1085 1198 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12321 Q92609 541 Q92609 Q92609 TBC1 domain family member 5 TBC1D5 sp|Q92609|TBCD5_HUMAN TBC1 domain family member 5 OS=Homo sapiens GN=TBC1D5 PE=1 SV=1 0.989727 21.9261 0.0104543 72.883 61.978 72.883 1 S QLNKGLSSKNISSSPSVESLPGGREFTGSPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X XXXXXXXXXPPPPPPPPPPPPPPPXXXXXXX NISS(0.001)S(0.006)PS(0.99)VES(0.002)LPGGR NIS(-35)S(-28.65)S(-21.93)PS(21.93)VES(-26.42)LPGGR 7 3 -0.52978 12187 0 0 9264.5 0 0 11638 0 0 10339 0 0 9704.9 0 0 11781 0 0 10723 0 0 9155.2 0 0 8414.9 0 0 3095.1 0 0 11530 0 0 8758 0 0 11728 0 0 10573 0 0 9975 0 0 11718 0 0 10803 0 0 9378.4 0 0 8400.9 0 0 3126.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10642000 10642000 0 0 NaN 2955 1606 541 541 2833 3003 3216 3569 3216 3569 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13008 3216 3569 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13008 3216 3569 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13008 Q92609 43 Q92609 Q92609 TBC1 domain family member 5 TBC1D5 sp|Q92609|TBCD5_HUMAN TBC1 domain family member 5 OS=Homo sapiens GN=TBC1D5 PE=1 SV=1 0.989678 20.2941 4.93725E-23 280.38 252.29 280.38 1 S SNKSGGDSNKNGRRTSSTLDSEGTFNSYRKE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX RT(0.009)S(0.99)S(0.001)TLDSEGTFNSYR RT(-20.29)S(20.29)S(-30.07)T(-39.97)LDS(-68.03)EGT(-97.47)FNS(-136.23)Y(-201.15)R 3 2 -0.15831 4815 0 0 3514 0 0 4911.3 0 0 3269.4 0 0 7904.4 0 0 5342.7 0 0 8389 0 0 6951.2 0 0 3187.6 0 0 5405.5 0 0 4556.5 0 0 3318.2 0 0 4977.4 0 0 3405.2 0 0 7846.7 0 0 5293.1 0 0 8373.6 0 0 7073.1 0 0 3365.8 0 0 5250.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22019000 22019000 0 0 NaN 2956 1606 43 43 3539;4970 3756;5299 4002 4442 4002 4442 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12097 4002 4442 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12097 4002 4442 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12097 Q92610 368 Q92610 Q92610 Zinc finger protein 592 ZNF592 sp|Q92610|ZN592_HUMAN Zinc finger protein 592 OS=Homo sapiens GN=ZNF592 PE=1 SV=2 0.92713 11.0511 0.00927102 76.158 62.194 76.158 1 S CSDSSSKGSPSVAASSPPAIPKVRIKTIKTS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPXXXXXXXXX GSPSVAAS(0.073)S(0.927)PPAIPK GS(-44.34)PS(-42.49)VAAS(-11.05)S(11.05)PPAIPK 9 3 -0.11436 9869.8 0 0 10764 0 0 8954 0 0 10060 0 0 8699.7 0 0 10028 0 0 10246 0 0 9769.3 0 0 10094 0 0 12105 0 0 9335.9 0 0 10164 0 0 9068.6 0 0 10371 0 0 8865.2 0 0 10073 0 0 10351 0 0 10174 0 0 9966.2 0 0 11625 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12673000 12673000 0 0 NaN 2957 1607 368 368 1626 1713 1852 2064 1852 2064 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14542 1852 2064 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14542 1852 2064 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14542 Q92610 348 Q92610 Q92610 Zinc finger protein 592 ZNF592 sp|Q92610|ZN592_HUMAN Zinc finger protein 592 OS=Homo sapiens GN=ZNF592 PE=1 SV=2 0.968629 15.1009 0.0117214 63.76 30.57 63.76 1 S RSPLEATRKSIKPSDSPRSICSDSSSKGSPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX S(0.001)IKPS(0.03)DS(0.969)PR S(-28.26)IKPS(-15.1)DS(15.1)PR 7 3 1.0439 28297 0 0 28951 0 0 30403 0 0 30219 0 0 28747 0 0 30717 0 0 30286 0 0 30250 0 0 33351 0 0 3462.9 0 0 26784 0 0 27356 0 0 30476 0 0 30958 0 0 29295 0 0 30768 0 0 30839 0 0 30465 0 0 32777 0 0 3960.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27874000 27874000 0 0 NaN 2958 1607 348 348 3844 4097 4372 4862 4372 4862 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8605 4372 4862 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8605 4372 4862 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8605 Q92614 140 Q92614 Q92614 Unconventional myosin-XVIIIa MYO18A sp|Q92614|MY18A_HUMAN Unconventional myosin-XVIIIa OS=Homo sapiens GN=MYO18A PE=1 SV=3 0.991938 20.9003 0.0502109 53.798 12.002 53.798 1 S GSLAKQNSQMIVKRFSFSQRSRDESASETST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX RFS(0.992)FS(0.008)QR RFS(20.9)FS(-20.9)QR 3 2 -0.66607 14164 0 0 36596 0 0 12321 0 0 37441 0 0 12093 0 0 12742 0 0 11638 0 0 20392 0 0 37332 0 0 5062.3 0 0 13396 0 0 34576 0 0 12509 0 0 37994 0 0 12303 0 0 13980 0 0 12572 0 0 20311 0 0 35745 0 0 5238.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 40467000 40467000 0 0 NaN 2959 1608 140 140 3232 3428 3663 4063 3663 4063 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12012 3663 4063 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12012 3663 4063 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12012 Q92614 2020 Q92614 Q92614 Unconventional myosin-XVIIIa MYO18A sp|Q92614|MY18A_HUMAN Unconventional myosin-XVIIIa OS=Homo sapiens GN=MYO18A PE=1 SV=3 0.998499 28.2387 0.000759073 99.536 81.712 99.536 1 S SSSPTSYWKSLAPDRSDDEHDPLDNTSRPRY X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPPPX S(0.001)LAPDRS(0.998)DDEHDPLDNTSRPR S(-28.24)LAPDRS(28.24)DDEHDPLDNT(-58.32)S(-58.32)RPR 7 4 -2.5129 12437 0 0 10820 0 0 10655 0 0 10986 0 0 11907 0 0 11983 0 0 12297 0 0 13071 0 0 13324 0 0 8984.5 0 0 11762 0 0 10223 0 0 10848 0 0 11286 0 0 12016 0 0 11997 0 0 12527 0 0 13340 0 0 13103 0 0 8762.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28631000 28631000 0 0 NaN 2960 1608 2020 2020 3917 4175 4456 4954 4456 4954 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10088 4456 4954 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10088 4456 4954 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10088 Q92614 2007 Q92614 Q92614 Unconventional myosin-XVIIIa MYO18A sp|Q92614|MY18A_HUMAN Unconventional myosin-XVIIIa OS=Homo sapiens GN=MYO18A PE=1 SV=3 0.985586 18.8809 7.16115E-10 208.6 145.39 208.6 1 S GPSKAASDDGSLKSSSPTSYWKSLAPDRSDD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX S(0.001)S(0.013)S(0.986)PTSYWK S(-28.25)S(-18.88)S(18.88)PT(-37.26)S(-67.31)Y(-139.41)WK 3 2 1.0736 33286 0 0 18161 0 0 33447 0 0 19345 0 0 11668 0 0 32724 0 0 14255 0 0 23364 0 0 19597 0 0 13655 0 0 31497 0 0 17163 0 0 33408 0 0 20006 0 0 13168 0 0 32112 0 0 14532 0 0 24210 0 0 19110 0 0 13399 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 79996000 79996000 0 0 NaN 2961 1608 2007 2007 4451 4742 5047 5599 5047 5599 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15829 5047 5599 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15829 5047 5599 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15829 Q92614 728 Q92614 Q92614 Unconventional myosin-XVIIIa MYO18A sp|Q92614|MY18A_HUMAN Unconventional myosin-XVIIIa OS=Homo sapiens GN=MYO18A PE=1 SV=3 0.922266 11.8561 1.26418E-07 146.67 128.35 146.67 1 S IFKHQHKGGTLQRSTSFRQGPEESGLGDGTG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.018)T(0.06)S(0.922)FRQGPEESGLGDGTGPK S(-17.2)T(-11.86)S(11.86)FRQGPEES(-57.59)GLGDGT(-111.03)GPK 3 3 1.5048 21641 0 0 12140 0 0 21700 0 0 11647 0 0 13932 0 0 22789 0 0 14463 0 0 16650 0 0 13094 0 0 20295 0 0 20478 0 0 11465 0 0 21753 0 0 12168 0 0 14603 0 0 22306 0 0 14659 0 0 17550 0 0 12978 0 0 19495 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17077000 17077000 0 0 NaN 2962 1608 728 728 4519 4818 5133 5701 5133 5701 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12600 5133 5701 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12600 5133 5701 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12600 Q92615 736 Q92615 Q92615 La-related protein 4B LARP4B sp|Q92615|LAR4B_HUMAN La-related protein 4B OS=Homo sapiens GN=LARP4B PE=1 SV=3 1 64.6237 0.000218912 118.73 101.49 117.7 1;2 S AMGKRLSREQSTPPKSPQ_____________ X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX EQS(0.414)T(0.586)PPKS(1)PQ EQS(-1.52)T(1.52)PPKS(64.62)PQ 8 2 0.41369 42375 8229.9 0 37695 9194.5 0 45001 7446.9 0 35187 8173.2 0 26869 6206.6 0 42456 8319 0 31331 7404.3 0 38102 7941.1 0 37996 10131 0 6215.8 3637.3 0 40108 7784.7 0 35595 8679.9 0 44949 7530.7 0 36399 8456.7 0 28407 6391.3 0 42189 8334.1 0 31860 7554.1 0 38575 8089.8 0 37208 9880.7 0 6734.8 3608.7 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 60673000 43017000 17656000 0 NaN 2963 1609 736 736 1106 1164;1165 1252;1253;1254 1376;1377;1378 1254 1378 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7109 1253 1377 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7069 1253 1377 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7069 Q92615 498 Q92615 Q92615 La-related protein 4B LARP4B sp|Q92615|LAR4B_HUMAN La-related protein 4B OS=Homo sapiens GN=LARP4B PE=1 SV=3 0.995766 23.7142 0.00837596 84.687 61.333 84.687 1 S GSLESSPGLGRGRKNSFGYRKKREEKFTSSQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX KNS(0.996)FGY(0.004)R KNS(23.71)FGY(-23.71)R 3 3 0.36366 60901 0 0 49074 0 0 62932 0 0 46066 0 0 50834 0 0 63142 0 0 60833 0 0 59201 0 0 49631 0 0 1743.1 0 0 57635 0 0 46341 0 0 63123 0 0 47757 0 0 52432 0 0 62482 0 0 61136 0 0 59589 0 0 49446 0 0 3011.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 94398000 94398000 0 0 NaN 2964 1609 498 498 2147 2269 2443 2720 2443 2720 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10139 2443 2720 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10139 2443 2720 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10139 Q92615 599 Q92615 Q92615 La-related protein 4B LARP4B sp|Q92615|LAR4B_HUMAN La-related protein 4B OS=Homo sapiens GN=LARP4B PE=1 SV=3 0.5 0 0.000678696 100.21 74.061 100.21 1 S PSVPASCAVSATYERSPSPAHLPDDPKVAEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.5)PS(0.5)PAHLPDDPKVAEK S(0)PS(0)PAHLPDDPKVAEK 1 4 -0.23132 33359 0 0 38873 0 0 31550 0 0 39021 0 0 24022 0 0 38192 0 0 30129 0 0 40170 0 0 42434 0 0 6800.9 0 0 31559 0 0 36723 0 0 31792 0 0 40043 0 0 24920 0 0 38357 0 0 30712 0 0 40422 0 0 41347 0 0 7333.6 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 114360000 114360000 0 0 NaN 2965 1609 599 599 4182;4183 4457;4458 4750;4751 5269;5270 4751 5270 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12940 4751 5270 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12940 4751 5270 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12940 Q92615 601 Q92615 Q92615 La-related protein 4B LARP4B sp|Q92615|LAR4B_HUMAN La-related protein 4B OS=Homo sapiens GN=LARP4B PE=1 SV=3 0.5 0 0.000678696 100.21 74.061 100.21 1 S VPASCAVSATYERSPSPAHLPDDPKVAEKQR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.5)PS(0.5)PAHLPDDPKVAEK S(0)PS(0)PAHLPDDPKVAEK 3 4 -0.23132 33359 0 0 38873 0 0 31550 0 0 39021 0 0 24022 0 0 38192 0 0 30129 0 0 40170 0 0 42434 0 0 6800.9 0 0 31559 0 0 36723 0 0 31792 0 0 40043 0 0 24920 0 0 38357 0 0 30712 0 0 40422 0 0 41347 0 0 7333.6 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 114360000 114360000 0 0 NaN 2966 1609 601 601 4182;4183 4457;4458 4750;4751 5269;5270 4751 5270 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12940 4751 5270 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12940 4751 5270 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12940 Q92615 568 Q92615 Q92615 La-related protein 4B LARP4B sp|Q92615|LAR4B_HUMAN La-related protein 4B OS=Homo sapiens GN=LARP4B PE=1 SV=3 0.961806 14.016 1.01925E-13 195.96 166.49 195.96 1 S RLSSLIIGPSKERTLSADASVNTLPVVVSRE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX T(0.038)LS(0.962)ADASVNTLPVVVSR T(-14.02)LS(14.02)ADAS(-43.3)VNT(-75.57)LPVVVS(-149.09)R 3 2 -1.9225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2967 1609 568 568 4787 5105 5439 6050 5439 6050 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19630 5439 6050 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19630 5439 6050 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19630 Q92618 116 Q92618 Q92618 Zinc finger protein 516 ZNF516 sp|Q92618|ZN516_HUMAN Zinc finger protein 516 OS=Homo sapiens GN=ZNF516 PE=1 SV=1 0.990883 20.364 6.56696E-05 130.2 97.978 130.2 1 S PLGEMRASEGLDACASPTKSASACNRLLNGA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX ASEGLDACAS(0.991)PT(0.009)K AS(-53.01)EGLDACAS(20.36)PT(-20.36)K 10 2 0.9765 30388 0 0 4943 0 0 34381 0 0 4498.6 0 0 7210.6 0 0 34743 0 0 6581.3 0 0 16117 0 0 4528.2 0 0 6198.4 0 0 28770 0 0 4666.9 0 0 34056 0 0 5132.1 0 0 8910.8 0 0 33253 0 0 6673.2 0 0 17075 0 0 4555.1 0 0 6209.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14157000 14157000 0 0 NaN 2968 1611 116 116 450 479 514 576 514 576 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11198 514 576 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11198 514 576 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11198 Q92619 23 Q92619 Q92619 Minor histocompatibility protein HA-1;Minor histocompatibility antigen HA-1 HMHA1 sp|Q92619|HMHA1_HUMAN Minor histocompatibility protein HA-1 OS=Homo sapiens GN=HMHA1 PE=1 SV=2 0.956456 13.4174 7.43218E-11 205.24 129.65 205.24 1 S ELMKTPSISKKNRAGSPSPQPSGELPRKDGA X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX AGS(0.956)PS(0.044)PQPSGELPR AGS(13.42)PS(-13.42)PQPS(-67.16)GELPR 3 2 0.34024 45269 0 0 11667 0 0 47845 0 0 11172 0 0 27011 0 0 48108 0 0 28803 0 0 28168 0 0 12623 0 0 10777 0 0 42845 0 0 11019 0 0 47777 0 0 12095 0 0 28651 0 0 46343 0 0 28790 0 0 29352 0 0 13142 0 0 10800 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 112970000 112970000 0 0 NaN 2969 1612 23 23 229 243 261 292 261 292 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10100 261 292 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10100 261 292 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10100 Q92619 73 Q92619 Q92619 Minor histocompatibility protein HA-1;Minor histocompatibility antigen HA-1 HMHA1 sp|Q92619|HMHA1_HUMAN Minor histocompatibility protein HA-1 OS=Homo sapiens GN=HMHA1 PE=1 SV=2 1 121.908 3.83562E-11 192.27 166.68 192.27 1 S ATGTLKRPTSLSRHASAAGFPLSGAASWTLG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP HAS(1)AAGFPLSGAASWTLGR HAS(121.91)AAGFPLS(-121.91)GAAS(-177.47)WT(-182.73)LGR 3 3 0.35343 5140.4 0 0 3010.7 0 0 6195 0 0 3000.9 0 0 2697.3 0 0 6889.7 0 0 3669.7 0 0 4829.4 0 0 3080.6 0 0 16980 0 0 4868.1 0 0 2844.1 0 0 6136.4 0 0 3144.3 0 0 2956.9 0 0 6738.5 0 0 3672.6 0 0 5435.7 0 0 3064.6 0 0 16100 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17379000 17379000 0 0 NaN 2970 1612 73 73 1695 1787 1929 2149 1929 2149 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21092 1929 2149 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21092 1929 2149 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21092 Q92619 577 Q92619 Q92619 Minor histocompatibility protein HA-1;Minor histocompatibility antigen HA-1 HMHA1 sp|Q92619|HMHA1_HUMAN Minor histocompatibility protein HA-1 OS=Homo sapiens GN=HMHA1 PE=1 SV=2 0.648535 2.66158 4.05111E-57 375.21 350.72 375.21 1 S HVSANAWSPVMRARKSSFNVSDVARPEAAGS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP KS(0.649)S(0.351)FNVSDVARPEAAGSPPEEGGCTEGTPAK KS(2.66)S(-2.66)FNVS(-38.76)DVARPEAAGS(-83.38)PPEEGGCT(-259.97)EGT(-327.32)PAK 2 4 0.79559 21866 0 0 3133.8 0 0 24565 0 0 3026.4 0 0 10541 0 0 22228 0 0 8932.8 0 0 12023 0 0 3342 0 0 7068.8 0 0 20701 0 0 2959.7 0 0 24405 0 0 3422.5 0 0 11497 0 0 21309 0 0 9016.9 0 0 12669 0 0 3534.7 0 0 6934.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 64447000 64447000 0 0 NaN 2971 1612 577 577 2228 2355;2356 2536 2833 2536 2833 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14655 2536 2833 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14655 2536 2833 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14655 Q92619 578 Q92619 Q92619 Minor histocompatibility protein HA-1;Minor histocompatibility antigen HA-1 HMHA1 sp|Q92619|HMHA1_HUMAN Minor histocompatibility protein HA-1 OS=Homo sapiens GN=HMHA1 PE=1 SV=2 0.498506 0.532605 8.98561E-08 158.15 142.27 158.15 S VSANAWSPVMRARKSSFNVSDVARPEAAGSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP KS(0.441)S(0.499)FNVS(0.062)DVARPEAAGS(0.998)PPEEGGCTEGTPAK KS(-0.53)S(0.53)FNVS(-9.15)DVARPEAAGS(28.14)PPEEGGCT(-67.77)EGT(-102.04)PAK 3 4 0.19419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2972 1612 578 578 2228 2355;2356 2537 2834 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15365 2537 2834 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15365 2537 2834 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15365 Q92619 592 Q92619 Q92619 Minor histocompatibility protein HA-1;Minor histocompatibility antigen HA-1 HMHA1 sp|Q92619|HMHA1_HUMAN Minor histocompatibility protein HA-1 OS=Homo sapiens GN=HMHA1 PE=1 SV=2 0.998491 28.137 8.98561E-08 158.15 142.27 158.15 2 S SSFNVSDVARPEAAGSPPEEGGCTEGTPAKD X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPX KS(0.441)S(0.499)FNVS(0.062)DVARPEAAGS(0.998)PPEEGGCTEGTPAK KS(-0.53)S(0.53)FNVS(-9.15)DVARPEAAGS(28.14)PPEEGGCT(-67.77)EGT(-102.04)PAK 17 4 0.19419 0 6143.4 0 0 2863.9 0 0 6003.1 0 0 2671.9 0 0 3789.8 0 0 6231.6 0 0 4075.6 0 0 4805.6 0 0 2492.4 0 0 20305 0 0 5812.7 0 0 2704.3 0 0 6026.3 0 0 2812.3 0 0 3979.1 0 0 6107.7 0 0 4091.5 0 0 5487.5 0 0 2526.4 0 0 19231 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 9294900 0 9294900 0 NaN 2973 1612 592 592 2228 2355;2356 2537 2834 2537 2834 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15365 2537 2834 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15365 2537 2834 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15365 Q92619 951 Q92619 Q92619 Minor histocompatibility protein HA-1;Minor histocompatibility antigen HA-1 HMHA1 sp|Q92619|HMHA1_HUMAN Minor histocompatibility protein HA-1 OS=Homo sapiens GN=HMHA1 PE=1 SV=2 0.73633 4.47696 1.5906E-07 147.41 124.82 147.41 1 S PTLLRPRPTEATVSLSSLVDYPHQARVIETL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPXXXXX PTEATVS(0.001)LS(0.736)S(0.263)LVDYPHQAR PT(-54.62)EAT(-47.48)VS(-28.65)LS(4.48)S(-4.48)LVDY(-108.71)PHQAR 9 3 -0.27914 4450.6 0 0 4866.7 0 0 3894 0 0 3667 0 0 5097.4 0 0 4187.7 0 0 5191.1 0 0 4894.3 0 0 4161.6 0 0 20645 0 0 4209.3 0 0 4590.6 0 0 3967.9 0 0 3846.8 0 0 5102.2 0 0 4222 0 0 5251.4 0 0 5504 0 0 4149.9 0 0 19553 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12471000 12471000 0 0 NaN 2974 1612 951 951 2990 3169 3392 3762 3392 3762 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20840 3392 3762 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20840 3392 3762 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20840 Q92625 620 Q92625 Q92625 Ankyrin repeat and SAM domain-containing protein 1A ANKS1A sp|Q92625|ANS1A_HUMAN Ankyrin repeat and SAM domain-containing protein 1A OS=Homo sapiens GN=ANKS1A PE=1 SV=4 1 42.2105 0.0403753 42.21 16.972 42.21 1 S SRAPPTSKPKAELKLSRSLSKSDSDLLTCSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPXXXXXXXXXXXXXX AELKLS(1)R AELKLS(42.21)R 6 3 -0.35722 33371 0 0 13278 0 0 34533 0 0 12420 0 0 7609 0 0 32580 0 0 6539 0 0 17737 0 0 13510 0 0 1195.2 0 0 31582 0 0 12538 0 0 34374 0 0 13129 0 0 9302.8 0 0 31573 0 0 6898.4 0 0 18403 0 0 13035 0 0 1535.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17643000 17643000 0 0 NaN 2975 1613 620 620 144 151 163 184 163 184 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11578 163 184 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11578 163 184 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11578 Q92625 647 Q92625 Q92625 Ankyrin repeat and SAM domain-containing protein 1A ANKS1A sp|Q92625|ANS1A_HUMAN Ankyrin repeat and SAM domain-containing protein 1A OS=Homo sapiens GN=ANKS1A PE=1 SV=4 0.86169 8.8964 4.74289E-05 128.76 106.55 128.76 1 S TCSPTEDATMGSRSESLSNCSIGKKRLEKSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX S(0.111)ES(0.862)LS(0.027)NCSIGK S(-8.9)ES(8.9)LS(-15.01)NCS(-95.35)IGK 3 3 0.27097 14676 0 0 11161 0 0 18801 0 0 10491 0 0 10359 0 0 17078 0 0 9614.1 0 0 12565 0 0 11971 0 0 2793.9 0 0 13902 0 0 10539 0 0 18589 0 0 10918 0 0 11002 0 0 16773 0 0 9886.6 0 0 12863 0 0 11712 0 0 2921.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27024000 27024000 0 0 NaN 2976 1613 647 647 3706 3941 4201 4668 4201 4668 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12401 4201 4668 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12401 4201 4668 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12401 Q92625 663 Q92625 Q92625 Ankyrin repeat and SAM domain-containing protein 1A ANKS1A sp|Q92625|ANS1A_HUMAN Ankyrin repeat and SAM domain-containing protein 1A OS=Homo sapiens GN=ANKS1A PE=1 SV=4 0.870925 8.77529 6.79962E-17 248.76 212.92 248.76 1 S LSNCSIGKKRLEKSPSFASEWDEIEKIMSSI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX S(0.115)PS(0.871)FAS(0.014)EWDEIEK S(-8.78)PS(8.78)FAS(-18.06)EWDEIEK 3 2 0.015529 20400 0 0 18571 0 0 18726 0 0 14203 0 0 14253 0 0 21534 0 0 13820 0 0 22184 0 0 18796 0 0 41718 0 0 19297 0 0 17519 0 0 18897 0 0 14968 0 0 14727 0 0 21344 0 0 14225 0 0 23484 0 0 18335 0 0 39796 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17443000 17443000 0 0 NaN 2977 1613 663 663 4172 4447 4739 5258 4739 5258 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21753 4739 5258 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21753 4739 5258 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21753 Q92667 108 Q92667 Q92667 A-kinase anchor protein 1, mitochondrial AKAP1 sp|Q92667|AKAP1_HUMAN A-kinase anchor protein 1, mitochondrial OS=Homo sapiens GN=AKAP1 PE=1 SV=1 0.790659 5.84379 0.000162745 119.4 96.918 119.4 1 S PALLQTHPPCRRSESSGILPNTTDMRLRPGT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX S(0.003)ES(0.206)S(0.791)GILPNT(0.001)TDMR S(-24.77)ES(-5.84)S(5.84)GILPNT(-31.01)T(-35.95)DMR 4 2 -0.12458 9543.8 0 0 10421 0 0 10860 0 0 12539 0 0 9999 0 0 10939 0 0 9760.5 0 0 11202 0 0 12151 0 0 16323 0 0 9035.8 0 0 9856.6 0 0 10849 0 0 12720 0 0 10197 0 0 11070 0 0 10012 0 0 11718 0 0 11888 0 0 15629 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14007000 14007000 0 0 NaN 2978 1614 108 108 3715 3950 4210 4677 4210 4677 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15316 4210 4677 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15316 4210 4677 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15316 Q92667 151 Q92667 Q92667 A-kinase anchor protein 1, mitochondrial AKAP1 sp|Q92667|AKAP1_HUMAN A-kinase anchor protein 1, mitochondrial OS=Homo sapiens GN=AKAP1 PE=1 SV=1 0.737385 4.48374 2.68794E-07 151.07 133.99 151.07 1 S TGGEAKSIPLECPLSSPKGVLFSSKSAEVCK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX SIPLECPLS(0.263)S(0.737)PK S(-125.09)IPLECPLS(-4.48)S(4.48)PK 10 3 0.95288 4667.9 0 0 7774.4 0 0 6118 0 0 7263.8 0 0 6378.4 0 0 5598.5 0 0 6825.5 0 0 7310.8 0 0 7617.5 0 0 4526.4 0 0 4422.5 0 0 7341.3 0 0 6081.2 0 0 7462.7 0 0 6464.5 0 0 5716 0 0 6948 0 0 7403.2 0 0 7482.6 0 0 4431.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17536000 17536000 0 0 NaN 2979 1614 151 151 3853 4106 4382 4873 4382 4873 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18606 4382 4873 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18606 4382 4873 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18606 Q92667 445 Q92667 Q92667 A-kinase anchor protein 1, mitochondrial AKAP1 sp|Q92667|AKAP1_HUMAN A-kinase anchor protein 1, mitochondrial OS=Homo sapiens GN=AKAP1 PE=1 SV=1 0.998498 28.232 0.000549077 117.31 84.121 117.31 1 S PPPKTYVSCLKSLLSSPTKDSKPNISAHHIS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX SLLS(0.002)S(0.998)PTK S(-70.49)LLS(-28.23)S(28.23)PT(-57.21)K 5 3 0.15112 10284 0 0 11740 0 0 9733.7 0 0 11666 0 0 7695.4 0 0 9373.4 0 0 7769.3 0 0 10692 0 0 13558 0 0 879.75 0 0 9729 0 0 11090 0 0 9808.1 0 0 11946 0 0 7936.2 0 0 9515.9 0 0 8063.4 0 0 10700 0 0 13132 0 0 1075.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25370000 25370000 0 0 NaN 2980 1614 445 445 3951 4210 4492 4993 4492 4993 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14765 4492 4993 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14765 4492 4993 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14765 Q92667 429 Q92667 Q92667 A-kinase anchor protein 1, mitochondrial AKAP1 sp|Q92667|AKAP1_HUMAN A-kinase anchor protein 1, mitochondrial OS=Homo sapiens GN=AKAP1 PE=1 SV=1 0.993716 22.0451 0.015215 57.763 47.247 57.763 1 S PPDAGLPLPGLPAEGSPPPKTYVSCLKSLLS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX TVLGPDTAEPAT(0.006)AEAAVAPPDAGLPLPGLPAEGS(0.994)PPPK T(-46.18)VLGPDT(-42.54)AEPAT(-22.05)AEAAVAPPDAGLPLPGLPAEGS(22.05)PPPK 34 4 -0.88706 2937.7 0 0 8932.7 0 0 5234 0 0 9301.4 0 0 7223.9 0 0 6667.3 0 0 6389 0 0 7147.1 0 0 7268.6 0 0 78472 0 0 2788.4 0 0 8440.5 0 0 5161.1 0 0 9485.6 0 0 7202.3 0 0 6954.4 0 0 6567.7 0 0 9514.9 0 0 7134.6 0 0 74056 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 57504000 57504000 0 0 NaN 2981 1614 429 429 5009 5339 5689 6319 5689 6319 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23437 5689 6319 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23437 5689 6319 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23437 Q92685 11 Q92685 Q92685 Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase ALG3 sp|Q92685|ALG3_HUMAN Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase OS=Homo sapiens GN=ALG3 PE=1 SV=1 0.5 0 5.90832E-05 124.25 73.897 85.554 1 S _____MAAGLRKRGRSGSAAQAEGLCKQWLQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(0.5)GS(0.5)AAQAEGLCK S(0)GS(0)AAQAEGLCK 1 3 -0.18519 40147 0 0 27679 0 0 41179 0 0 32933 0 0 32392 0 0 36513 0 0 32849 0 0 38295 0 0 30908 0 0 10226 0 0 37993 0 0 26177 0 0 41299 0 0 33551 0 0 33395 0 0 36481 0 0 33363 0 0 38652 0 0 30579 0 0 10515 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 160780000 160780000 0 0 NaN 2982 1615 11 11 3800 4048 4317;4318 4796;4797 4318 4797 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11154 4317 4796 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10876 4317 4796 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10876 Q92685 13 Q92685 Q92685 Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase ALG3 sp|Q92685|ALG3_HUMAN Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase OS=Homo sapiens GN=ALG3 PE=1 SV=1 0.5 0 5.90832E-05 124.25 73.897 85.554 1 S ___MAAGLRKRGRSGSAAQAEGLCKQWLQRA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.5)GS(0.5)AAQAEGLCK S(0)GS(0)AAQAEGLCK 3 3 -0.18519 40147 0 0 27679 0 0 41179 0 0 32933 0 0 32392 0 0 36513 0 0 32849 0 0 38295 0 0 30908 0 0 10226 0 0 37993 0 0 26177 0 0 41299 0 0 33551 0 0 33395 0 0 36481 0 0 33363 0 0 38652 0 0 30579 0 0 10515 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 160780000 160780000 0 0 NaN 2983 1615 13 13 3800 4048 4317;4318 4796;4797 4318 4797 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11154 4317 4796 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10876 4317 4796 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10876 Q92734 197 Q92734 Q92734 Protein TFG TFG sp|Q92734|TFG_HUMAN Protein TFG OS=Homo sapiens GN=TFG PE=1 SV=2 0.999803 37.0602 0.000245417 110.38 96.068 110.38 1 S MSAFGLTDDQVSGPPSAPAEDRSGTPDSIAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPXXXXXXXXX NVMSAFGLTDDQVSGPPS(1)APAEDR NVMS(-94.26)AFGLT(-69.29)DDQVS(-37.06)GPPS(37.06)APAEDR 18 3 0.53786 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2984 1617 197 197 2957 3136 3358 3723 3358 3723 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21820 3358 3723 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21820 3358 3723 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21820 Q92766 1122 Q92766 Q92766 Ras-responsive element-binding protein 1 RREB1 sp|Q92766|RREB1_HUMAN Ras-responsive element-binding protein 1 OS=Homo sapiens GN=RREB1 PE=1 SV=3 0.968315 15.1778 1.16205E-22 265.64 221.61 265.64 1 S SVPKAATTATPAATTSPKESSEPPAPASSPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPXXXXXXXXXXXXX AATTATPAAT(0.002)T(0.029)S(0.968)PK AAT(-114.56)T(-110.06)AT(-81.94)PAAT(-26.26)T(-15.18)S(15.18)PK 12 2 -0.11724 20821 0 0 18335 0 0 21519 0 0 17570 0 0 12751 0 0 21358 0 0 14883 0 0 15995 0 0 18942 0 0 3810.9 0 0 19705 0 0 17316 0 0 21525 0 0 18148 0 0 13491 0 0 21179 0 0 15159 0 0 16366 0 0 18518 0 0 3958.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22272000 22272000 0 0 NaN 2985 1618 1122 1122 83 88 96 109 96 109 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9071 96 109 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9071 96 109 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9071 Q92766 161 Q92766 Q92766 Ras-responsive element-binding protein 1 RREB1 sp|Q92766|RREB1_HUMAN Ras-responsive element-binding protein 1 OS=Homo sapiens GN=RREB1 PE=1 SV=3 0.998009 27.033 1.91488E-07 148.28 124.48 148.28 1 S IHEKDPNSATATAPPSPLKRRRLSSKRKLSH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX IHEKDPNSATAT(0.002)APPS(0.998)PLK IHEKDPNS(-70.01)AT(-48.35)AT(-27.03)APPS(27.03)PLK 16 4 1.0646 10221 0 0 10317 0 0 10034 0 0 8698.6 0 0 7859.6 0 0 9701.4 0 0 9924.6 0 0 9812.2 0 0 9325 0 0 6576.2 0 0 9670.9 0 0 9736.8 0 0 10092 0 0 9046.3 0 0 8133 0 0 9693.2 0 0 9986.8 0 0 10036 0 0 9226.4 0 0 6419.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21331000 21331000 0 0 NaN 2986 1618 161 161 1847 1950 2107 2361 2107 2361 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12158 2107 2361 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12158 2107 2361 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12158 Q92766 1320 Q92766 Q92766 Ras-responsive element-binding protein 1 RREB1 sp|Q92766|RREB1_HUMAN Ras-responsive element-binding protein 1 OS=Homo sapiens GN=RREB1 PE=1 SV=3 0.926466 11.0039 8.58472E-09 173.36 159.34 173.36 1 S VAGDAPVEQATAETASPVHREEHGRGESHEP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX QVAGDAPVEQATAET(0.074)AS(0.926)PVHR QVAGDAPVEQAT(-50.58)AET(-11)AS(11)PVHR 17 3 -0.51899 12138 0 0 12333 0 0 11997 0 0 12711 0 0 17421 0 0 12904 0 0 18119 0 0 15047 0 0 12283 0 0 9855.1 0 0 11485 0 0 11653 0 0 12156 0 0 13031 0 0 17363 0 0 12971 0 0 18250 0 0 15307 0 0 12367 0 0 9628 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 123580000 123580000 0 0 NaN 2987 1618 1320 1320 3163 3355 3586 3976 3586 3976 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10899 3586 3976 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10899 3586 3976 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10899 Q92766 1238 Q92766 Q92766 Ras-responsive element-binding protein 1 RREB1 sp|Q92766|RREB1_HUMAN Ras-responsive element-binding protein 1 OS=Homo sapiens GN=RREB1 PE=1 SV=3 0.99996 44.5107 1.53797E-06 155.43 119.47 155.43 1 S QGSPPEDKLLRAKRNSYTNCLQKITCPHCPR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX RNS(1)YTNCLQK RNS(44.51)Y(-53.48)T(-44.51)NCLQK 3 3 0.023262 31161 0 0 20429 0 0 29278 0 0 19938 0 0 38258 0 0 31710 0 0 39391 0 0 34107 0 0 21256 0 0 4260.7 0 0 29479 0 0 19295 0 0 29701 0 0 20691 0 0 38293 0 0 31297 0 0 39546 0 0 34247 0 0 21743 0 0 4801.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 50846000 50846000 0 0 NaN 2988 1618 1238 1238 3372 3579 3819 4241 3819 4241 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10420 3819 4241 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10420 3819 4241 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10420 Q92766 3 Q92766 Q92766 Ras-responsive element-binding protein 1 RREB1 sp|Q92766|RREB1_HUMAN Ras-responsive element-binding protein 1 OS=Homo sapiens GN=RREB1 PE=1 SV=3 0.144257 0 0.0264439 45.957 35.153 45.957 S _____________MTSSSPAGLEGSDLSSIN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T(0.144)S(0.144)S(0.144)S(0.144)PAGLEGS(0.133)DLS(0.133)S(0.133)INT(0.023)MMS(0.001)AVMSVGK T(0)S(0)S(0)S(0)PAGLEGS(-0.35)DLS(-0.35)S(-0.35)INT(-8.05)MMS(-23.07)AVMS(-40.3)VGK 2 3 -0.2376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2989 1618 3 3 4969 5298 5644 6273 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24573 5644 6273 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24573 5644 6273 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24573 Q92766 4 Q92766 Q92766 Ras-responsive element-binding protein 1 RREB1 sp|Q92766|RREB1_HUMAN Ras-responsive element-binding protein 1 OS=Homo sapiens GN=RREB1 PE=1 SV=3 0.144257 0 0.0264439 45.957 35.153 45.957 S ____________MTSSSPAGLEGSDLSSINT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T(0.144)S(0.144)S(0.144)S(0.144)PAGLEGS(0.133)DLS(0.133)S(0.133)INT(0.023)MMS(0.001)AVMSVGK T(0)S(0)S(0)S(0)PAGLEGS(-0.35)DLS(-0.35)S(-0.35)INT(-8.05)MMS(-23.07)AVMS(-40.3)VGK 3 3 -0.2376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2990 1618 4 4 4969 5298 5644 6273 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24573 5644 6273 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24573 5644 6273 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24573 Q92766 5 Q92766 Q92766 Ras-responsive element-binding protein 1 RREB1 sp|Q92766|RREB1_HUMAN Ras-responsive element-binding protein 1 OS=Homo sapiens GN=RREB1 PE=1 SV=3 0.144257 0 0.0264439 45.957 35.153 45.957 S ___________MTSSSPAGLEGSDLSSINTM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T(0.144)S(0.144)S(0.144)S(0.144)PAGLEGS(0.133)DLS(0.133)S(0.133)INT(0.023)MMS(0.001)AVMSVGK T(0)S(0)S(0)S(0)PAGLEGS(-0.35)DLS(-0.35)S(-0.35)INT(-8.05)MMS(-23.07)AVMS(-40.3)VGK 4 3 -0.2376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 2991 1618 5 5 4969 5298 5644 6273 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24573 5644 6273 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24573 5644 6273 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24573 Q92766 1653 Q92766 Q92766 Ras-responsive element-binding protein 1 RREB1 sp|Q92766|RREB1_HUMAN Ras-responsive element-binding protein 1 OS=Homo sapiens GN=RREB1 PE=1 SV=3 0.999944 42.5084 2.9966E-05 127.02 112.65 127.02 1 S AGWPSEPGQGDLNPESPAALGQDLLEPRSKR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPXXX VTAGWPSEPGQGDLNPES(1)PAALGQDLLEPR VT(-64.74)AGWPS(-42.51)EPGQGDLNPES(42.51)PAALGQDLLEPR 18 3 -0.036793 7419.7 0 0 9703.1 0 0 8666 0 0 7606.4 0 0 6488.7 0 0 7761.7 0 0 5598.4 0 0 8775.1 0 0 7684.4 0 0 73462 0 0 7025.6 0 0 9154.2 0 0 8626.2 0 0 7940.5 0 0 6702.6 0 0 7924.1 0 0 5798.5 0 0 10976 0 0 7493.7 0 0 69376 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 56475000 56475000 0 0 NaN 2992 1618 1653 1653 5286 5633 6004 6670 6004 6670 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23450 6004 6670 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23450 6004 6670 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23450 Q92766 36 Q92766 Q92766 Ras-responsive element-binding protein 1 RREB1 sp|Q92766|RREB1_HUMAN Ras-responsive element-binding protein 1 OS=Homo sapiens GN=RREB1 PE=1 SV=3 0.999979 46.8026 3.12732E-07 158.65 100.06 158.65 1 S MSAVMSVGKVTENGGSPQGIKSPSKPPGPNR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX VTENGGS(1)PQGIK VT(-46.8)ENGGS(46.8)PQGIK 7 2 0.12262 22866 0 0 15947 0 0 23125 0 0 16264 0 0 13227 0 0 22906 0 0 13493 0 0 18102 0 0 16777 0 0 9321 0 0 21638 0 0 15066 0 0 23150 0 0 16787 0 0 14014 0 0 22621 0 0 13812 0 0 18625 0 0 16414 0 0 9195.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11577000 11577000 0 0 NaN 2993 1618 36 36 5287 5634 6005 6671 6005 6671 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11371 6005 6671 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11371 6005 6671 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11371 Q92785 118 Q92785 Q92785 Zinc finger protein ubi-d4 DPF2 sp|Q92785|REQU_HUMAN Zinc finger protein ubi-d4 OS=Homo sapiens GN=DPF2 PE=1 SV=2 0.918733 10.5333 1.33977E-15 219.72 175.47 219.72 1 S DQTLKKEGLISQDGSSLEALLRTDPLEKRGA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPXXXXXXXXX EGLISQDGS(0.081)S(0.919)LEALLR EGLIS(-49.5)QDGS(-10.53)S(10.53)LEALLR 10 2 0.28208 7925.9 0 0 11007 0 0 9909.1 0 0 11193 0 0 21181 0 0 9712.2 0 0 22933 0 0 16430 0 0 10552 0 0 76822 0 0 7507.4 0 0 10399 0 0 10005 0 0 11457 0 0 20842 0 0 10030 0 0 22921 0 0 18535 0 0 10937 0 0 72717 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21683000 21683000 0 0 NaN 2994 1619 118 118 968 1022 1107 1222 1107 1222 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23189 1107 1222 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23189 1107 1222 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23189 Q92793 2063 Q92793 Q92793 CREB-binding protein CREBBP sp|Q92793|CBP_HUMAN CREB-binding protein OS=Homo sapiens GN=CREBBP PE=1 SV=3 0.699665 3.72002 5.26803E-16 227.3 159.3 227.3 1 S VAGPRMPSVQPPRSISPSALQDLLRTLKSPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX S(0.297)IS(0.7)PS(0.003)ALQDLLR S(-3.72)IS(3.72)PS(-23.34)ALQDLLR 3 2 -0.049375 40220 0 0 42071 0 0 36838 0 0 35115 0 0 125180 0 0 38418 0 0 120970 0 0 66284 0 0 39743 0 0 44923 0 0 38046 0 0 39704 0 0 38362 0 0 36533 0 0 121680 0 0 38794 0 0 121110 0 0 66762 0 0 42659 0 0 43835 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 115480000 115480000 0 0 NaN 2995 1620 2063 2063 3869 4122 4398 4892 4398 4892 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23635 4398 4892 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23635 4398 4892 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23635 Q92794 1089 Q92794 Q92794 Histone acetyltransferase KAT6A KAT6A sp|Q92794|KAT6A_HUMAN Histone acetyltransferase KAT6A OS=Homo sapiens GN=KAT6A PE=1 SV=2 0.929803 11.2207 0.0304326 60.301 25.8 60.301 1 S EDENELFPREYFRRLSSQDVLRCQSSSKRKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX RLS(0.93)S(0.07)QDVLR RLS(11.22)S(-11.22)QDVLR 3 2 0.37643 22075 0 0 14837 0 0 21075 0 0 15303 0 0 18710 0 0 22878 0 0 17669 0 0 19178 0 0 15631 0 0 8484.1 0 0 20885 0 0 14019 0 0 21248 0 0 15806 0 0 19110 0 0 22563 0 0 17980 0 0 19636 0 0 15509 0 0 8432.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16943000 16943000 0 0 NaN 2996 1621 1089 1089 3347 3549 3787 4205 3787 4205 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11209 3787 4205 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11209 3787 4205 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11209 Q92794 1001 Q92794 Q92794 Histone acetyltransferase KAT6A KAT6A sp|Q92794|KAT6A_HUMAN Histone acetyltransferase KAT6A OS=Homo sapiens GN=KAT6A PE=1 SV=2 0.782587 8.57307 0.00424743 89.311 76.951 89.311 1 S ESSEEEEEPESPRSSSPPILTKPTLKRKKPF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX S(0.109)S(0.109)S(0.783)PPILTKPTLK S(-8.57)S(-8.57)S(8.57)PPILT(-47.22)KPT(-72.63)LK 3 3 0.092193 17342 0 0 11754 0 0 18431 0 0 14121 0 0 12063 0 0 17205 0 0 12998 0 0 14803 0 0 13355 0 0 7608.5 0 0 16414 0 0 11117 0 0 18420 0 0 14404 0 0 12631 0 0 17092 0 0 13196 0 0 15170 0 0 13163 0 0 7506.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23973000 23973000 0 0 NaN 2997 1621 1001 1001 4446 4737 5042 5592 5042 5592 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17130 5042 5592 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17130 5042 5592 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17130 Q92797 1173 Q92797 Q92797 Symplekin SYMPK sp|Q92797|SYMPK_HUMAN Symplekin OS=Homo sapiens GN=SYMPK PE=1 SV=2 0.839758 8.5975 1.88238E-08 170.1 144.78 170.1 1 S KLKPGGVGAPSSSSPSPSPSARPGPPPSEEA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPPPPXXXXXXXXX LKPGGVGAPSSS(0.002)S(0.039)PS(0.84)PS(0.116)PS(0.004)AR LKPGGVGAPS(-58.54)S(-39.53)S(-26.56)S(-13.37)PS(8.6)PS(-8.6)PS(-23.57)AR 15 3 1.4662 13112 0 0 15822 0 0 14016 0 0 15297 0 0 8381.8 0 0 13172 0 0 8885.9 0 0 12992 0 0 17111 0 0 9291.1 0 0 12410 0 0 14944 0 0 13993 0 0 15704 0 0 8853.4 0 0 13313 0 0 9246.1 0 0 13319 0 0 16535 0 0 9049.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19926000 19926000 0 0 NaN 2998 1622 1173 1173 2419 2557 2751 3073 2751 3073 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11459 2751 3073 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11459 2751 3073 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11459 Q92797 494 Q92797 Q92797 Symplekin SYMPK sp|Q92797|SYMPK_HUMAN Symplekin OS=Homo sapiens GN=SYMPK PE=1 SV=2 0.999969 45.1386 2.30991E-45 340.41 308.82 340.41 1 S EKVVKTESVLIKRRLSAQGQAISVVGSLSSM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RLS(1)AQGQAISVVGSLSSMSPLEEEAPQAK RLS(45.14)AQGQAIS(-45.14)VVGS(-101)LS(-155.6)S(-170.43)MS(-213.73)PLEEEAPQAK 3 4 0.33215 10676 0 0 5914 0 0 10999 0 0 7136.7 0 0 11218 0 0 11066 0 0 14010 0 0 12303 0 0 7113.2 0 0 16859 0 0 10104 0 0 5593.8 0 0 11065 0 0 7316.3 0 0 11405 0 0 10964 0 0 13938 0 0 12801 0 0 7311.1 0 0 16159 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 43650000 43650000 0 0 NaN 2999 1622 494 494 2547;3319 2691;3521 3758 4174 3758 4174 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22968 3758 4174 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22968 3758 4174 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22968 Q92797 508 Q92797 Q92797 Symplekin SYMPK sp|Q92797|SYMPK_HUMAN Symplekin OS=Homo sapiens GN=SYMPK PE=1 SV=2 0.456745 0 1.13044E-07 158.97 133.56 158.97 S LSAQGQAISVVGSLSSMSPLEEEAPQAKRRP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPXXX LSAQGQAISVVGSLS(0.086)S(0.457)MS(0.457)PLEEEAPQAK LS(-110.14)AQGQAIS(-75.41)VVGS(-31.3)LS(-7.24)S(0)MS(0)PLEEEAPQAK 16 4 1.129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3000 1622 508 508 2547;3319 2691;3521 2888 3220 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20961 2888 3220 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20961 2888 3220 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20961 Q92797 510 Q92797 Q92797 Symplekin SYMPK sp|Q92797|SYMPK_HUMAN Symplekin OS=Homo sapiens GN=SYMPK PE=1 SV=2 0.456745 0 1.13044E-07 158.97 133.56 158.97 S AQGQAISVVGSLSSMSPLEEEAPQAKRRPEP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LSAQGQAISVVGSLS(0.086)S(0.457)MS(0.457)PLEEEAPQAK LS(-110.14)AQGQAIS(-75.41)VVGS(-31.3)LS(-7.24)S(0)MS(0)PLEEEAPQAK 18 4 1.129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3001 1622 510 510 2547;3319 2691;3521 2888 3220 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20961 2888 3220 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20961 2888 3220 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20961 Q92833 331 Q92833 Q92833 Protein Jumonji JARID2 sp|Q92833|JARD2_HUMAN Protein Jumonji OS=Homo sapiens GN=JARID2 PE=1 SV=2 0.993784 22.0377 0.0130515 64.121 37.335 64.121 1 S GAGVTSAKKMREVRPSPSKTVKYTATVTKGA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX EVRPS(0.994)PS(0.006)K EVRPS(22.04)PS(-22.04)K 5 3 -0.28032 33717 0 0 13096 0 0 33820 0 0 13888 0 0 10402 0 0 32970 0 0 10306 0 0 17760 0 0 13177 0 0 2034.8 0 0 31906 0 0 12376 0 0 33762 0 0 14518 0 0 11940 0 0 32009 0 0 10574 0 0 18465 0 0 12880 0 0 2327 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 38606000 38606000 0 0 NaN 3002 1624 331 331 1217 1280 1379 1530 1379 1530 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7439 1379 1530 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7439 1379 1530 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7439 Q92835 971 Q92835 Q92835 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 INPP5D sp|Q92835|SHIP1_HUMAN Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 OS=Homo sapiens GN=INPP5D PE=1 SV=2 1 110.093 2.60986E-07 160.02 146.11 160.02 1 S CRGESPPTPPGQPPISPKKFLPSTANRGLPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPXXXXXXXXXXXXX GESPPTPPGQPPIS(1)PK GES(-122.17)PPT(-110.09)PPGQPPIS(110.09)PK 14 3 -0.16731 19455 0 0 13686 0 0 21438 0 0 11381 0 0 35632 0 0 21664 0 0 31594 0 0 24211 0 0 12686 0 0 15956 0 0 18417 0 0 12915 0 0 21639 0 0 11992 0 0 35246 0 0 21318 0 0 31836 0 0 24668 0 0 13319 0 0 15585 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 68051000 68051000 0 0 NaN 3003 1625 971 971 1411 1488 1597 1767 1597 1767 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13465 1597 1767 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13465 1597 1767 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13465 Q92835 1039 Q92835 Q92835 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 INPP5D sp|Q92835|SHIP1_HUMAN Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 OS=Homo sapiens GN=INPP5D PE=1 SV=2 1 58.831 0.000403714 103.85 65.487 58.831 1 S SLSSFPKPAPRKDQESPKMPRKEPPPCPEPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX KDQES(1)PKMPR KDQES(58.83)PKMPR 5 4 0.6471 52539 0 0 20141 0 0 44261 0 0 23236 0 0 156740 0 0 50614 0 0 164800 0 0 80835 0 0 20331 0 0 10849 0 0 49684 0 0 19044 0 0 46437 0 0 24109 0 0 152400 0 0 49910 0 0 163410 0 0 80239 0 0 26189 0 0 12086 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 141190000 141190000 0 0 NaN 3004 1625 1039 1039 2029;2030 2147;2148 2313;2314;2315 2580;2581;2582 2315 2582 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8307 2314 2581 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8251 2314 2581 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8251 Q92835 243 Q92835 Q92835 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 INPP5D sp|Q92835|SHIP1_HUMAN Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 OS=Homo sapiens GN=INPP5D PE=1 SV=2 1 81.5099 8.88258E-08 159.78 140.66 81.51 1 S LPSLESLQRLFDQQLSPGLRPRPQVPGEANP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPPPP LFDQQLS(1)PGLRPR LFDQQLS(81.51)PGLRPR 7 3 -0.44308 6212 0 0 3839.1 0 0 7167.7 0 0 5363 0 0 29042 0 0 6019.2 0 0 27740 0 0 12702 0 0 5344.6 0 0 26141 0 0 5881.7 0 0 3635.4 0 0 7427.9 0 0 5424.1 0 0 28141 0 0 6137.1 0 0 27686 0 0 13270 0 0 6223.4 0 0 24909 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 108690000 108690000 0 0 NaN 3005 1625 243 243 2346;2347 2479;2480 2668;2669 2980;2981 2668 2980 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18147 2669 2981 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19523 2669 2981 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19523 Q92841 599 Q92841 Q92841 Probable ATP-dependent RNA helicase DDX17 DDX17 sp|Q92841|DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17 OS=Homo sapiens GN=DDX17 PE=1 SV=2 0.984493 18.027 0.0114241 87.942 46.515 87.942 1 S CDRRLRGVKDGGRRDSASYRDRSETDRAGYA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX RDS(0.984)AS(0.016)YR RDS(18.03)AS(-18.03)Y(-62.54)R 3 2 3.8487 8522.2 0 0 5085.8 0 0 8587.6 0 0 3574.9 0 0 8868.8 0 0 8344.3 0 0 8119.7 0 0 7534 0 0 3817.9 0 0 12544 0 0 8064.4 0 0 4795.8 0 0 8645.5 0 0 3839.4 0 0 8968.8 0 0 8164.5 0 0 8183.3 0 0 7966.5 0 0 3949.6 0 0 11986 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 15693000 15693000 0 0 NaN 3006 1626 599 599 3206;3207 3400;3401 3634;3635 4030;4031 3634 4030 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5106 3634 4030 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5106 3634 4030 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5106 Q92841 671 Q92841 Q92841 Probable ATP-dependent RNA helicase DDX17 DDX17 sp|Q92841|DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17 OS=Homo sapiens GN=DDX17 PE=1 SV=2 0.378708 0 9.68441E-07 151.55 112.26 151.55 S GAGTYGASSTTSTGRSSQSSSQQFSGIGRSG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPXX S(0.379)S(0.087)QS(0.379)S(0.137)S(0.018)QQFSGIGR S(0)S(-6.37)QS(0)S(-4.41)S(-13.22)QQFS(-56.2)GIGR 1 2 -4.0275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3007 1626 671 671 4408 4696 5000 5547 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10742 5000 5547 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10742 5000 5547 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10742 Q92841 674 Q92841 Q92841 Probable ATP-dependent RNA helicase DDX17 DDX17 sp|Q92841|DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17 OS=Homo sapiens GN=DDX17 PE=1 SV=2 0.378708 0 9.68441E-07 151.55 112.26 151.55 S TYGASSTTSTGRSSQSSSQQFSGIGRSGQQP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.379)S(0.087)QS(0.379)S(0.137)S(0.018)QQFSGIGR S(0)S(-6.37)QS(0)S(-4.41)S(-13.22)QQFS(-56.2)GIGR 4 2 -4.0275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3008 1626 674 674 4408 4696 5000 5547 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10742 5000 5547 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10742 5000 5547 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10742 Q92879 28 Q92879 Q92879 CUGBP Elav-like family member 1 CELF1 sp|Q92879|CELF1_HUMAN CUGBP Elav-like family member 1 OS=Homo sapiens GN=CELF1 PE=1 SV=2 0.645243 2.59793 0.0113785 69.261 35.375 69.261 1 S LDAIKMFVGQVPRTWSEKDLRELFEQYGAVY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX T(0.355)WS(0.645)EKDLR T(-2.6)WS(2.6)EKDLR 3 3 -0.65464 9138.2 0 0 13212 0 0 10296 0 0 12414 0 0 8854 0 0 10167 0 0 7760.5 0 0 11583 0 0 15611 0 0 3622.3 0 0 8651.4 0 0 12476 0 0 10282 0 0 12758 0 0 9062.1 0 0 10316 0 0 8167 0 0 11673 0 0 15070 0 0 3678.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11237000 11237000 0 0 NaN 3009 1627 28 28 5029 5363 5715 6354 5715 6354 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13220 5715 6354 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13220 5715 6354 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13220 Q92888 863 Q92888 Q92888 Rho guanine nucleotide exchange factor 1 ARHGEF1 sp|Q92888|ARHG1_HUMAN Rho guanine nucleotide exchange factor 1 OS=Homo sapiens GN=ARHGEF1 PE=1 SV=2 1 227.628 1.09002E-15 227.63 180.64 227.63 1 S GPPRDGDGVPGGGPLSPARTQEIQENLLSLE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX DGDGVPGGGPLS(1)PAR DGDGVPGGGPLS(227.63)PAR 12 2 -0.32228 20847 0 0 13692 0 0 18978 0 0 13452 0 0 12643 0 0 19329 0 0 12460 0 0 15795 0 0 15267 0 0 14865 0 0 19719 0 0 12933 0 0 19139 0 0 13921 0 0 13204 0 0 19095 0 0 12769 0 0 16429 0 0 14945 0 0 14363 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26162000 26162000 0 0 NaN 3010 1628 863 863 671 715 762 842 762 842 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12112 762 842 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12112 762 842 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12112 Q92890 299 Q92890 Q92890 Ubiquitin fusion degradation protein 1 homolog UFD1L sp|Q92890|UFD1_HUMAN Ubiquitin fusion degradation protein 1 homolog OS=Homo sapiens GN=UFD1L PE=1 SV=3 0.999926 41.2873 5.73618E-07 144.16 87.222 144.16 1 S DEAGGRFVAFSGEGQSLRKKGRKP_______ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX FVAFSGEGQS(1)LR FVAFS(-41.29)GEGQS(41.29)LR 10 2 0.12177 36822 0 0 25149 0 0 37652 0 0 23946 0 0 25061 0 0 38372 0 0 25717 0 0 30425 0 0 24143 0 0 16735 0 0 34846 0 0 23751 0 0 37712 0 0 24892 0 0 26183 0 0 37750 0 0 26103 0 0 31330 0 0 23889 0 0 16462 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 42837000 42837000 0 0 NaN 3011 1629 299 299 1339;1340 1412;1413 1519;1520 1682;1683 1519 1682 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19139 1519 1682 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19139 1519 1682 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19139 Q92890 247 Q92890 Q92890 Ubiquitin fusion degradation protein 1 homolog UFD1L sp|Q92890|UFD1_HUMAN Ubiquitin fusion degradation protein 1 homolog OS=Homo sapiens GN=UFD1L PE=1 SV=3 0.65549 2.79364 0.00681125 83.065 69.16 83.065 1 S GNRLDGKKKGVEPSPSPIKPGDIKRGIPNYE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPXXXXXX GVEPS(0.345)PS(0.655)PIKPGDIKR GVEPS(-2.79)PS(2.79)PIKPGDIKR 7 4 0.53462 8316.1 0 0 13427 0 0 8654.1 0 0 12518 0 0 7229.9 0 0 9616.7 0 0 7438.9 0 0 10007 0 0 12996 0 0 2589.3 0 0 7870.4 0 0 12679 0 0 8677.7 0 0 12862 0 0 7429.2 0 0 9778.5 0 0 7714.3 0 0 10101 0 0 12587 0 0 2669.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14644000 14644000 0 0 NaN 3012 1629 247 247 1668 1760 1902 2120 1902 2120 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13232 1902 2120 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13232 1902 2120 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13232 Q92922 328 Q92922 Q92922 SWI/SNF complex subunit SMARCC1 SMARCC1 sp|Q92922|SMRC1_HUMAN SWI/SNF complex subunit SMARCC1 OS=Homo sapiens GN=SMARCC1 PE=1 SV=3 0.99999 50.1659 0.000360068 100.94 76.901 100.94 1;2 S RRDRKASANARKRKHSPSPPPPTPTESRKKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPXXX RKHS(1)PS(1)PPPPTPTESR RKHS(50.17)PS(42.43)PPPPT(-42.43)PT(-62.25)ES(-63.3)R 4 4 0.81286 9874 153740 0 8736.7 163640 0 9367.9 153940 0 8724.7 170530 0 8535.4 178570 0 9945 158000 0 10332 163370 0 10433 173340 0 9219.3 193720 0 2864.7 35599 0 9341.4 145480 0 8253.2 154630 0 9455.2 155270 0 8978.6 174470 0 8735.2 179580 0 9925.5 159190 0 10401 167860 0 10532 174350 0 9143.9 189850 0 2938.9 37532 0 1 5 0 1 5 0 1 5 0 1 5 0 1 5 0 1 5 0 1 5 0 1 5 0 1 5 0 1 5 0 311090000 13687000 297400000 0 NaN 3013 1631 328 328 2088;3292 2208;2209;3493 2377;2378;3730 2647;2648;2649;2650;4143;4144 3730 4143 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6156 3730 4143 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6156 3730 4143 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6156 Q92922 330 Q92922 Q92922 SWI/SNF complex subunit SMARCC1 SMARCC1 sp|Q92922|SMRC1_HUMAN SWI/SNF complex subunit SMARCC1 OS=Homo sapiens GN=SMARCC1 PE=1 SV=3 0.999942 42.4265 0.000360068 100.94 76.901 100.94 1;2 S DRKASANARKRKHSPSPPPPTPTESRKKSGK X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPXXXXX RKHS(1)PS(1)PPPPTPTESR RKHS(50.17)PS(42.43)PPPPT(-42.43)PT(-62.25)ES(-63.3)R 6 4 0.81286 9874 153740 0 8736.7 163640 0 9367.9 153940 0 8724.7 170530 0 8535.4 178570 0 9945 158000 0 10332 163370 0 10433 173340 0 9219.3 193720 0 2864.7 35599 0 9341.4 145480 0 8253.2 154630 0 9455.2 155270 0 8978.6 174470 0 8735.2 179580 0 9925.5 159190 0 10401 167860 0 10532 174350 0 9143.9 189850 0 2938.9 37532 0 1 5 0 1 5 0 1 5 0 1 5 0 1 5 0 1 5 0 1 5 0 1 5 0 1 5 0 1 5 0 311090000 13687000 297400000 0 NaN 3014 1631 330 330 2088;3292 2208;2209;3493 2377;2378;3730 2647;2648;2649;2650;4143;4144 3730 4143 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6156 3730 4143 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6156 3730 4143 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6156 Q92922 310 Q92922 Q92922 SWI/SNF complex subunit SMARCC1 SMARCC1 sp|Q92922|SMRC1_HUMAN SWI/SNF complex subunit SMARCC1 OS=Homo sapiens GN=SMARCC1 PE=1 SV=3 1 87.3879 0.00244613 94.119 70.514 87.388 1 S SFRQRISTKNEEPVRSPERRDRKASANARKR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX NEEPVRS(1)PERR NEEPVRS(87.39)PERR 7 3 -0.68174 15566 0 0 20336 0 0 17438 0 0 22439 0 0 14343 0 0 16399 0 0 13224 0 0 17866 0 0 23453 0 0 4983.3 0 0 14737 0 0 19223 0 0 17412 0 0 22814 0 0 14732 0 0 16735 0 0 13795 0 0 18015 0 0 22708 0 0 5105.8 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 400870000 400870000 0 0 NaN 3015 1631 310 310 2800;2801 2969;2970 3181;3182 3533;3534 3182 3534 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5309 3181 3533 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5847 3181 3533 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5847 Q92922 573 Q92922 Q92922 SWI/SNF complex subunit SMARCC1 SMARCC1 sp|Q92922|SMRC1_HUMAN SWI/SNF complex subunit SMARCC1 OS=Homo sapiens GN=SMARCC1 PE=1 SV=3 1 175.23 1.3044E-08 175.23 150.93 175.23 1 S VLADTPSGLVPLHLRSPQVPAAQQMLNFPEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(1)PQVPAAQQMLNFPEK S(175.23)PQVPAAQQMLNFPEK 1 3 -0.065253 7721.7 0 0 12401 0 0 7597 0 0 10233 0 0 6876.2 0 0 8516 0 0 6232.7 0 0 9481.9 0 0 12231 0 0 21378 0 0 7306.3 0 0 11702 0 0 7646.9 0 0 10612 0 0 7017.1 0 0 8665 0 0 6539.5 0 0 10118 0 0 11814 0 0 20349 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27753000 27753000 0 0 NaN 3016 1631 573 573 4160 4435 4727 5246 4727 5246 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20757 4727 5246 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20757 4727 5246 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20757 Q92925 203 Q92925 Q92925 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 SMARCD2 sp|Q92925|SMRD2_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 OS=Homo sapiens GN=SMARCD2 PE=1 SV=3 0.765021 5.55853 4.06492E-18 237.74 215.02 237.74 1 S LTQKRKLRIYISNTFSPSKAEGDSAGTAGTP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPPP IYIS(0.001)NT(0.021)FS(0.765)PS(0.213)KAEGDSAGTAGTPGGTPAGDK IY(-153.59)IS(-28.63)NT(-15.57)FS(5.56)PS(-5.56)KAEGDS(-71.15)AGT(-121.39)AGT(-152.51)PGGT(-194.18)PAGDK 8 4 0.84219 7137.6 0 0 6606.8 0 0 7601.7 0 0 4909.3 0 0 5095.4 0 0 7798.6 0 0 6577.8 0 0 7852.5 0 0 6983.9 0 0 13936 0 0 6755.8 0 0 6231.5 0 0 7599.9 0 0 5190.8 0 0 5340.2 0 0 7714.8 0 0 6635.5 0 0 8294.5 0 0 6873.8 0 0 13304 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17164000 17164000 0 0 NaN 3017 1632 203 203 1985 2099 2263 2528 2263 2528 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18124 2263 2528 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18124 2263 2528 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18124 Q92934 134 Q92934 Q92934 Bcl2-associated agonist of cell death BAD sp|Q92934|BAD_HUMAN Bcl2-associated agonist of cell death OS=Homo sapiens GN=BAD PE=1 SV=3 0.996079 25.7651 0.0515033 45.126 25.205 45.126 1 S DEFVDSFKKGLPRPKSAGTATQMRQSSSWTR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(0.996)AGT(0.003)AT(0.001)QMR S(25.77)AGT(-25.77)AT(-28.91)QMR 1 2 -0.65553 1579.6 0 0 2352.4 0 0 1475 0 0 2428.6 0 0 1471.5 0 0 1548.1 0 0 1801.3 0 0 2071.1 0 0 2944.1 0 0 1589 0 0 1494.3 0 0 2222.7 0 0 1491.9 0 0 2474.8 0 0 1499.2 0 0 1600.5 0 0 1849 0 0 2105.1 0 0 2856.5 0 0 1544.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 2361700 2361700 0 0 NaN 3018 1633 134 134 3585 3808 4061 4516 4061 4516 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5247 4061 4516 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5247 4061 4516 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5247 Q92945 480 Q92945 Q92945 Far upstream element-binding protein 2 KHSRP sp|Q92945|FUBP2_HUMAN Far upstream element-binding protein 2 OS=Homo sapiens GN=KHSRP PE=1 SV=4 1 127.07 8.53663E-05 127.07 94.177 127.07 1 S PPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPXXXXXXX GS(1)PQQIDHAK GS(127.07)PQQIDHAK 2 3 0.69258 27673 0 0 44053 0 0 32516 0 0 39774 0 0 35695 0 0 33129 0 0 31919 0 0 36445 0 0 43376 0 0 3974.3 0 0 26204 0 0 41591 0 0 32495 0 0 40993 0 0 35993 0 0 33553 0 0 32985 0 0 36548 0 0 42313 0 0 4585.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 76913000 76913000 0 0 NaN 3019 1634 480 480 1623 1710 1849 2061 1849 2061 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8024 1849 2061 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8024 1849 2061 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8024 Q92945 274 Q92945 Q92945 Far upstream element-binding protein 2 KHSRP sp|Q92945|FUBP2_HUMAN Far upstream element-binding protein 2 OS=Homo sapiens GN=KHSRP PE=1 SV=4 0.990931 20.3846 3.49089E-05 119.83 96.263 119.83 1 S LQERAGVKMILIQDGSQNTNVDKPLRIIGDP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPXXXXX MILIQDGS(0.991)QNT(0.009)NVDKPLR MILIQDGS(20.38)QNT(-20.38)NVDKPLR 8 3 -1.8174 5938.5 0 0 6906.1 0 0 6960.5 0 0 7164.8 0 0 18856 0 0 7147.9 0 0 20080 0 0 11882 0 0 7876.2 0 0 13969 0 0 5623.2 0 0 6525.4 0 0 7098 0 0 7340.5 0 0 18438 0 0 7251.1 0 0 20047 0 0 12156 0 0 8289 0 0 13428 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9579000 9579000 0 0 NaN 3020 1634 274 274 2708 2873 3082 3429 3082 3429 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18696 3082 3429 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18696 3082 3429 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18696 Q92945 181 Q92945 Q92945 Far upstream element-binding protein 2 KHSRP sp|Q92945|FUBP2_HUMAN Far upstream element-binding protein 2 OS=Homo sapiens GN=KHSRP PE=1 SV=4 0.999934 41.7749 6.86326E-11 202.76 163.97 202.76 1 S QINKIQQDSGCKVQISPDSGGLPERSVSLTG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX VQIS(1)PDSGGLPER VQIS(41.77)PDS(-41.77)GGLPER 4 2 0.34042 30713 0 0 43873 0 0 29018 0 0 39169 0 0 44275 0 0 29795 0 0 48742 0 0 40389 0 0 43485 0 0 19118 0 0 29056 0 0 41419 0 0 29513 0 0 40354 0 0 44088 0 0 30452 0 0 49257 0 0 40679 0 0 43130 0 0 18936 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 109680000 109680000 0 0 NaN 3021 1634 181 181 5224 5568 5936 6600 5936 6600 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14305 5936 6600 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14305 5936 6600 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14305 Q92974 696 Q92974 Q92974 Rho guanine nucleotide exchange factor 2 ARHGEF2 sp|Q92974|ARHG2_HUMAN Rho guanine nucleotide exchange factor 2 OS=Homo sapiens GN=ARHGEF2 PE=1 SV=4 0.95723 13.5147 6.35051E-08 159.1 139.37 159.1 1 S REPALPLEPDSGGNTSPGVTANGEARTFNGS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY) XPPPPPPPPPPPPPPPPPPPPPPPPPXXXXX EPALPLEPDSGGNT(0.043)S(0.957)PGVTANGEAR EPALPLEPDS(-62.36)GGNT(-13.51)S(13.51)PGVT(-37.87)ANGEAR 15 3 0.022166 12987 0 0 11206 0 0 13429 0 0 11597 0 0 11554 0 0 13610 0 0 10165 0 0 13320 0 0 12050 0 0 59409 0 0 12290 0 0 10588 0 0 13471 0 0 11916 0 0 11818 0 0 13661 0 0 10465 0 0 15162 0 0 11809 0 0 56249 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 176920000 176920000 0 0 NaN 3022 1636 696 696 1083 1141 1229 1351;1352 1229 1351 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16751 1229 1351 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16751 1229 1351 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16751 Q92974 932 Q92974 Q92974 Rho guanine nucleotide exchange factor 2 ARHGEF2 sp|Q92974|ARHG2_HUMAN Rho guanine nucleotide exchange factor 2 OS=Homo sapiens GN=ARHGEF2 PE=1 SV=4 1 137.625 4.50175E-07 155.88 122.19 137.62 1 S SVHRNFEDRERQELGSPEERLQDSSDPDTGS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX QELGS(1)PEER QELGS(137.62)PEER 5 2 1.1449 97251 0 0 84011 0 0 90671 0 0 86173 0 0 109980 0 0 87837 0 0 115790 0 0 102020 0 0 101940 0 0 9531.6 0 0 92000 0 0 79375 0 0 91926 0 0 88374 0 0 110540 0 0 88165 0 0 117210 0 0 102070 0 0 101180 0 0 11336 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 146340000 146340000 0 0 NaN 3023 1636 932 932 1128;3014 1187;3195 1277;3418 1404;3790;3791 3418 3791 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7911 1277 1404 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6507 1277 1404 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6507 Q92974 172 Q92974 Q92974 Rho guanine nucleotide exchange factor 2 ARHGEF2 sp|Q92974|ARHG2_HUMAN Rho guanine nucleotide exchange factor 2 OS=Homo sapiens GN=ARHGEF2 PE=1 SV=4 0.851057 8.99849 2.06329E-07 164.57 137.15 164.57 1 S GHFNDESPLGLRRILSQSTDSLNMRNRTLSV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX ILS(0.851)QS(0.107)T(0.041)DSLNMR ILS(9)QS(-9)T(-13.12)DS(-34.25)LNMR 3 2 -0.80946 14074 0 0 11220 0 0 13147 0 0 11285 0 0 14826 0 0 13992 0 0 15655 0 0 13442 0 0 12551 0 0 14724 0 0 13314 0 0 10600 0 0 13313 0 0 11627 0 0 14955 0 0 13924 0 0 15810 0 0 13948 0 0 12515 0 0 14175 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11068000 11068000 0 0 NaN 3024 1636 172 172 1890 1994;1995 2154 2413 2154 2413 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17589 2154 2413 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17589 2154 2413 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17589 Q92974 174 Q92974 Q92974 Rho guanine nucleotide exchange factor 2 ARHGEF2 sp|Q92974|ARHG2_HUMAN Rho guanine nucleotide exchange factor 2 OS=Homo sapiens GN=ARHGEF2 PE=1 SV=4 0.857454 7.80212 9.08438E-23 267.41 216.13 267.41 1 S FNDESPLGLRRILSQSTDSLNMRNRTLSVES X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX ILSQS(0.857)T(0.142)DSLNMR ILS(-36.09)QS(7.8)T(-7.8)DS(-39.24)LNMR 5 2 0.5107 31462 0 0 38896 0 0 30448 0 0 38391 0 0 47396 0 0 34716 0 0 51540 0 0 39792 0 0 39935 0 0 48467 0 0 29767 0 0 36740 0 0 30933 0 0 39390 0 0 47144 0 0 35117 0 0 51946 0 0 41178 0 0 39897 0 0 46559 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 79335000 79335000 0 0 NaN 3025 1636 174 174 1890 1994;1995 2152;2153 2411;2412 2153 2412 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17178 2153 2412 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17178 2153 2412 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17178 Q92974 886 Q92974 Q92974 Rho guanine nucleotide exchange factor 2 ARHGEF2 sp|Q92974|ARHG2_HUMAN Rho guanine nucleotide exchange factor 2 OS=Homo sapiens GN=ARHGEF2 PE=1 SV=4 1 115.906 2.37832E-13 213.23 190.79 213.23 1 S AEAPWARRPVDPRRRSLPAGDALYLSFNPPQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(1)LPAGDALYLSFNPPQPSR S(115.91)LPAGDALY(-115.91)LS(-132.38)FNPPQPS(-199.95)R 1 3 0.63464 5138.6 0 0 6255.4 0 0 6267 0 0 7076.2 0 0 7023.3 0 0 6866.6 0 0 7714 0 0 10174 0 0 6690 0 0 45350 0 0 4866.6 0 0 5913.9 0 0 6256.2 0 0 7212.1 0 0 7091.4 0 0 7018.9 0 0 7791 0 0 11444 0 0 6644.5 0 0 42938 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 93065000 93065000 0 0 NaN 3026 1636 886 886 3959 4218 4501 5003 4501 5003 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23093 4501 5003 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23093 4501 5003 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23093 Q92974 151 Q92974 Q92974 Rho guanine nucleotide exchange factor 2 ARHGEF2 sp|Q92974|ARHG2_HUMAN Rho guanine nucleotide exchange factor 2 OS=Homo sapiens GN=ARHGEF2 PE=1 SV=4 0.821022 7.61133 7.1709E-08 159.56 145.4 159.56 1 S GSRRGRSSLSLAKSVSTTNIAGHFNDESPLG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.142)VS(0.821)T(0.031)T(0.006)NIAGHFNDESPLGLR S(-7.61)VS(7.61)T(-14.22)T(-21.66)NIAGHFNDES(-120.05)PLGLR 3 3 0.47845 15199 0 0 15246 0 0 21355 0 0 16865 0 0 18846 0 0 15288 0 0 24011 0 0 23586 0 0 17669 0 0 14110 0 0 14406 0 0 14411 0 0 21128 0 0 17192 0 0 19340 0 0 15525 0 0 24019 0 0 23762 0 0 17703 0 0 13832 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 52531000 52531000 0 0 NaN 3027 1636 151 151 4577 4882 5200 5775 5200 5775 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18663 5200 5775 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18663 5200 5775 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18663 Q92974 711 Q92974 Q92974 Rho guanine nucleotide exchange factor 2 ARHGEF2 sp|Q92974|ARHG2_HUMAN Rho guanine nucleotide exchange factor 2 OS=Homo sapiens GN=ARHGEF2 PE=1 SV=4 0.990559 20.2086 0.000348351 109.84 87.118 109.84 1 S SPGVTANGEARTFNGSIELCRADSDSSQRDR Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX T(0.009)FNGS(0.991)IELCR T(-20.21)FNGS(20.21)IELCR 5 2 -0.58228 12832 0 0 12372 0 0 14330 0 0 12905 0 0 25470 0 0 13827 0 0 28187 0 0 19264 0 0 12527 0 0 47865 0 0 12148 0 0 11690 0 0 14485 0 0 13233 0 0 25213 0 0 13977 0 0 28133 0 0 20555 0 0 13025 0 0 45516 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 51312000 51312000 0 0 NaN 3028 1636 711 711 4707 5018 5345 5940 5345 5940 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15918 5345 5940 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15918 5345 5940 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15918 Q93100 701 Q93100 Q93100 Phosphorylase b kinase regulatory subunit beta PHKB sp|Q93100|KPBB_HUMAN Phosphorylase b kinase regulatory subunit beta OS=Homo sapiens GN=PHKB PE=1 SV=3 0.689147 6.47271 8.42755E-19 248.92 229.37 248.92 1 S EELEPPKHSKVKRQSSTPSAPELGQQPDVNI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP RQS(0.155)S(0.689)T(0.155)PSAPELGQQPDVNISEWK RQS(-6.47)S(6.47)T(-6.47)PS(-32.99)APELGQQPDVNIS(-227.75)EWK 4 3 1.3521 10662 0 0 14118 0 0 10799 0 0 13665 0 0 15596 0 0 10814 0 0 18647 0 0 16252 0 0 14126 0 0 45038 0 0 10089 0 0 13335 0 0 10931 0 0 14013 0 0 15583 0 0 11119 0 0 18710 0 0 17449 0 0 14130 0 0 42785 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 70935000 70935000 0 0 NaN 3029 1637 701 701 3152;3429 3344;3642 3575;3884 3965;4312 3884 4312 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18664 3884 4312 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18664 3884 4312 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18664 Q93100 27 Q93100 Q93100 Phosphorylase b kinase regulatory subunit beta PHKB sp|Q93100|KPBB_HUMAN Phosphorylase b kinase regulatory subunit beta OS=Homo sapiens GN=PHKB PE=1 SV=3 0.741154 4.6163 0.00916645 84.309 61.392 84.309 1 S SWKVLERRARTKRSGSVYEPLKSINLPRPDN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX S(0.256)GS(0.741)VY(0.003)EPLK S(-4.62)GS(4.62)VY(-24.19)EPLK 3 2 0.46924 27045 0 0 14927 0 0 25347 0 0 17001 0 0 15229 0 0 25620 0 0 15639 0 0 20274 0 0 15527 0 0 15598 0 0 25586 0 0 14113 0 0 25497 0 0 17468 0 0 16057 0 0 25258 0 0 15897 0 0 21013 0 0 15325 0 0 15157 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11098000 11098000 0 0 NaN 3030 1637 27 27 3823 4075 4348 4830 4348 4830 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15100 4348 4830 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15100 4348 4830 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15100 Q969R5 67 Q969R5 Q969R5 Lethal(3)malignant brain tumor-like protein 2 L3MBTL2 sp|Q969R5|LMBL2_HUMAN Lethal(3)malignant brain tumor-like protein 2 OS=Homo sapiens GN=L3MBTL2 PE=1 SV=1 0.943424 12.2208 4.04495E-06 136.62 117.55 136.62 1 S SEAENEDREAGELPTSPLHLLSPGTPRSLDG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPXXXX EAGELPT(0.057)S(0.943)PLHLLSPGTPR EAGELPT(-12.22)S(12.22)PLHLLS(-82.66)PGT(-87.94)PR 8 3 0.395 5202.4 0 0 5059.9 0 0 5330.9 0 0 6051.9 0 0 5505.3 0 0 4745.8 0 0 7143.8 0 0 7083.8 0 0 5851.1 0 0 18731 0 0 4923.3 0 0 4785.5 0 0 5365.8 0 0 6132.4 0 0 5598.5 0 0 4879.8 0 0 7157.7 0 0 7579.4 0 0 5828.1 0 0 17802 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22665000 22665000 0 0 NaN 3031 1638 67 67 870 923 1000 1106 1000 1106 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20669 1000 1106 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20669 1000 1106 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20669 Q969S3 143 Q969S3 Q969S3 Zinc finger protein 622 ZNF622 sp|Q969S3|ZN622_HUMAN Zinc finger protein 622 OS=Homo sapiens GN=ZNF622 PE=1 SV=1 0.978803 16.6442 0.00129031 108.3 83.668 108.3 1 S MNAAIQQAIKAQPSMSPKKAPPAPAKEARNV X;X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPXXXXXXXXXXXXX AQPS(0.021)MS(0.979)PK AQPS(-16.64)MS(16.64)PK 6 2 -0.01012 57207 0 0 61543 0 0 58809 0 0 63891 0 0 38557 0 0 56799 0 0 40627 0 0 58228 0 0 69775 0 0 9931.2 0 0 54138 0 0 58151 0 0 58881 0 0 65344 0 0 40380 0 0 57285 0 0 42054 0 0 58651 0 0 67611 0 0 10699 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 105770000 105770000 0 0 NaN 3032 1639 143 143 397 424;425 459;460 509;510 460 510 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9606 460 510 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9606 460 510 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9606 Q969V6 385 Q969V6 Q969V6 MKL/myocardin-like protein 1 MKL1 sp|Q969V6|MKL1_HUMAN MKL/myocardin-like protein 1 OS=Homo sapiens GN=MKL1 PE=1 SV=1 0.992886 21.448 0.037111 48.477 15.531 48.477 1 S KTELIERLRAYQDQISPVPGAPKAPAATSIL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPXXXXXXXX AY(0.007)QDQIS(0.993)PVPGAPK AY(-21.45)QDQIS(21.45)PVPGAPK 7 3 -1.1701 8284.2 0 0 8539.9 0 0 9381.9 0 0 10017 0 0 9918.9 0 0 8932.5 0 0 8358.9 0 0 10065 0 0 9082.6 0 0 5527.5 0 0 7843.1 0 0 8075.8 0 0 9387.5 0 0 10178 0 0 10013 0 0 9026.5 0 0 8603.3 0 0 10219 0 0 8931.1 0 0 5437.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9537300 9537300 0 0 NaN 3033 1640 385 385 587 625 666 741 666 741 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14480 666 741 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14480 666 741 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14480 Q969V6 333 Q969V6 Q969V6 MKL/myocardin-like protein 1 MKL1 sp|Q969V6|MKL1_HUMAN MKL/myocardin-like protein 1 OS=Homo sapiens GN=MKL1 PE=1 SV=1 0.801636 7.28816 1.09615E-07 141.49 115.56 141.49 1 S SSSGAPGPCGLARQNSTSLTGKPGALPANLD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP QNS(0.802)T(0.15)S(0.04)LT(0.009)GKPGALPANLDDMK QNS(7.29)T(-7.29)S(-13.02)LT(-19.65)GKPGALPANLDDMK 3 3 0.056259 10592 0 0 5581.1 0 0 11892 0 0 5173.1 0 0 9029.3 0 0 12323 0 0 9619.8 0 0 8420.5 0 0 6379.5 0 0 16041 0 0 10028 0 0 5269.9 0 0 11865 0 0 5451.4 0 0 9337.3 0 0 12014 0 0 9675 0 0 9080.9 0 0 6432.1 0 0 15300 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12396000 12396000 0 0 NaN 3034 1640 333 333 3094 3282 3512 3893 3512 3893 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18363 3512 3893 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18363 3512 3893 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18363 Q96A00 26 Q96A00 Q96A00 Protein phosphatase 1 regulatory subunit 14A PPP1R14A sp|Q96A00|PP14A_HUMAN Protein phosphatase 1 regulatory subunit 14A OS=Homo sapiens GN=PPP1R14A PE=1 SV=1 1 100.692 0.000640871 100.69 54.784 100.69 1 S LSKLQSPSRARGPGGSPGGLQKRHARVTVKY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPXXXXXXXXX GPGGS(1)PGGLQK GPGGS(100.69)PGGLQK 5 2 0.022441 19924 0 0 91176 0 0 19974 0 0 90186 0 0 68055 0 0 18201 0 0 68415 0 0 59344 0 0 95603 0 0 18704 0 0 18853 0 0 86126 0 0 20699 0 0 91504 0 0 66254 0 0 22008 0 0 70368 0 0 58495 0 0 93179 0 0 18986 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 86201000 86201000 0 0 NaN 3035 1641 26 26 416;1541 445;1623 480;1752 534;1945 1752 1945 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10525 1752 1945 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10525 1752 1945 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10525 Q96A00 128 Q96A00 Q96A00 Protein phosphatase 1 regulatory subunit 14A PPP1R14A sp|Q96A00|PP14A_HUMAN Protein phosphatase 1 regulatory subunit 14A OS=Homo sapiens GN=PPP1R14A PE=1 SV=1 0.976981 16.278 5.75282E-07 140.73 122.81 140.73 1 S AKLQGLHRQPGLRQPSPSHDGSLSPLQDRAR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX QPS(0.977)PS(0.023)HDGSLSPLQDR QPS(16.28)PS(-16.28)HDGS(-74.48)LS(-107.6)PLQDR 3 3 1.8216 10234 0 0 14078 0 0 10343 0 0 13449 0 0 14586 0 0 10620 0 0 15336 0 0 14285 0 0 12800 0 0 7235.4 0 0 9684.2 0 0 13295 0 0 10462 0 0 13802 0 0 14560 0 0 10831 0 0 15506 0 0 14405 0 0 12737 0 0 7143.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 66304000 66304000 0 0 NaN 3036 1641 128 128 3105 3293 3523 3906 3523 3906 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11104 3523 3906 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11104 3523 3906 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11104 Q96A57 24 Q96A57 Q96A57 Transmembrane protein 230 TMEM230 sp|Q96A57|TM230_HUMAN Transmembrane protein 230 OS=Homo sapiens GN=TMEM230 PE=1 SV=1 0.792568 7.18236 1.03929E-22 254.56 199.35 254.56 1 S ATGIPSSKVKYSRLSSTDDGYIDLQFKKTPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX LS(0.056)S(0.793)T(0.152)DDGYIDLQFK LS(-11.52)S(7.18)T(-7.18)DDGY(-142.12)IDLQFK 3 3 0.089018 18514 0 0 14292 0 0 20094 0 0 14344 0 0 22253 0 0 18854 0 0 25794 0 0 21249 0 0 13157 0 0 161130 0 0 17525 0 0 13501 0 0 20176 0 0 14797 0 0 22493 0 0 19031 0 0 25740 0 0 26076 0 0 13518 0 0 152220 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 183240000 183240000 0 0 NaN 3037 1643 24 24 2600 2746 2945 3279;3280;3281 2945 3280 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22728 2945 3280 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22728 2945 3280 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22728 Q96A65 226 Q96A65 Q96A65 Exocyst complex component 4 EXOC4 sp|Q96A65|EXOC4_HUMAN Exocyst complex component 4 OS=Homo sapiens GN=EXOC4 PE=1 SV=1 1 143.067 3.66809E-11 204.63 190.97 204.63 1 S RNKEKGKISSLVKDASVPLIDVTNLPTPRKF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX DAS(1)VPLIDVTNLPTPR DAS(143.07)VPLIDVT(-143.07)NLPT(-184.95)PR 3 3 0.63188 2348.5 0 0 2629.1 0 0 2568.4 0 0 2431.4 0 0 2074.8 0 0 2332.9 0 0 2197.9 0 0 2818.9 0 0 2574.8 0 0 11814 0 0 2223.1 0 0 2482.5 0 0 2567.8 0 0 2507 0 0 2136.8 0 0 2371.1 0 0 2241.7 0 0 3164.7 0 0 2524.6 0 0 11189 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14684000 14684000 0 0 NaN 3038 1644 226 226 647 689 734 814 734 814 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22375 734 814 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22375 734 814 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22375 Q96AD5 404 Q96AD5 Q96AD5 Patatin-like phospholipase domain-containing protein 2 PNPLA2 sp|Q96AD5|PLPL2_HUMAN Patatin-like phospholipase domain-containing protein 2 OS=Homo sapiens GN=PNPLA2 PE=1 SV=1 0.999578 33.7453 4.03361E-05 128.95 107.86 128.95 1 S LPSRLPEQVELRRVQSLPSVPLSCAAYREAL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPXXX RVQS(1)LPSVPLSCAAYR RVQS(33.75)LPS(-33.75)VPLS(-78.87)CAAY(-93.62)R 4 3 -0.21184 11024 0 0 10084 0 0 11019 0 0 9807.8 0 0 9549.5 0 0 11955 0 0 10470 0 0 11277 0 0 10398 0 0 14734 0 0 10431 0 0 9524 0 0 11080 0 0 10122 0 0 9790.6 0 0 11906 0 0 10611 0 0 11782 0 0 10263 0 0 14135 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 126250000 126250000 0 0 NaN 3039 1645 404 404 3551;5229 3769;5574 4015;5942 4456;6606 4015 4456 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16999 4015 4456 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16999 4015 4456 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16999 Q96AE4 630 Q96AE4 Q96AE4 Far upstream element-binding protein 1 FUBP1 sp|Q96AE4|FUBP1_HUMAN Far upstream element-binding protein 1 OS=Homo sapiens GN=FUBP1 PE=1 SV=3 0.860629 7.90662 8.41229E-05 103.16 89.146 103.16 1 S WAEYYRQQAAYYAQTSPQGMPQHPPAPQGQ_ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPPPPPX QQAAYYAQT(0.139)S(0.861)PQGMPQHPPAPQGQ QQAAY(-59.64)Y(-52.33)AQT(-7.91)S(7.91)PQGMPQHPPAPQGQ 10 3 -0.80572 4207.9 0 0 5672.7 0 0 3912 0 0 4672.9 0 0 4259.7 0 0 4197.9 0 0 5499.8 0 0 5177 0 0 5558.2 0 0 7128.5 0 0 3980.6 0 0 5353.1 0 0 3962.8 0 0 4851.3 0 0 4319.8 0 0 4254.6 0 0 5540.4 0 0 5369.7 0 0 5481.8 0 0 6832.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19803000 19803000 0 0 NaN 3040 1646 630 630 3110 3298 3528 3911 3528 3911 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10235 3528 3911 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10235 3528 3911 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10235 Q96AG3 34 Q96AG3 Q96AG3 Solute carrier family 25 member 46 SLC25A46 sp|Q96AG3|S2546_HUMAN Solute carrier family 25 member 46 OS=Homo sapiens GN=SLC25A46 PE=1 SV=1 0.681046 6.75088 4.07631E-08 156.78 121.03 156.78 1 S RDEQGFGGAFPARSFSTGSDLGHWVTTPPDI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.144)FS(0.681)T(0.144)GS(0.031)DLGHWVTTPPDIPGSR S(-6.75)FS(6.75)T(-6.75)GS(-13.4)DLGHWVT(-72.1)T(-95.84)PPDIPGS(-133.84)R 3 3 0.96817 5510.1 0 0 7190.9 0 0 5652.3 0 0 7586.3 0 0 5716.3 0 0 6411.9 0 0 5943.7 0 0 7140.9 0 0 7665.5 0 0 18989 0 0 5214.5 0 0 6795.3 0 0 5684.6 0 0 7746.4 0 0 5801.9 0 0 6524.3 0 0 6086.4 0 0 7706.7 0 0 7490.5 0 0 18046 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16514000 16514000 0 0 NaN 3041 1647 34 34 3768 4009 4274 4749 4274 4749 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21148 4274 4749 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21148 4274 4749 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21148 Q96AP7 359 Q96AP7 Q96AP7 Endothelial cell-selective adhesion molecule ESAM sp|Q96AP7|ESAM_HUMAN Endothelial cell-selective adhesion molecule OS=Homo sapiens GN=ESAM PE=1 SV=1 0.9986 33.3284 0.00792177 81.077 65.949 81.077 1 S SPRLPTTDGAHPQPISPIPGGVSSSGLSRMG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPPPPPPXX LPTTDGAHPQPIS(0.999)PIPGGVSSSGLSR LPT(-55.22)T(-55.22)DGAHPQPIS(33.33)PIPGGVS(-34.03)S(-34.03)S(-33.33)GLS(-38.51)R 13 3 2.8439 5441.1 0 0 4332.2 0 0 5163.1 0 0 4669.2 0 0 7997.3 0 0 4575.9 0 0 13446 0 0 9354.2 0 0 4495.8 0 0 30985 0 0 5147.6 0 0 4094.4 0 0 5259.9 0 0 4772.1 0 0 8016.9 0 0 4709 0 0 13180 0 0 10131 0 0 4815.6 0 0 29393 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8951100 8951100 0 0 NaN 3042 1648 359 359 2515 2656 2852 3181 2852 3181 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16980 2852 3181 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16980 2852 3181 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16980 Q96AT1 146 Q96AT1 Q96AT1 Uncharacterized protein KIAA1143 KIAA1143 sp|Q96AT1|K1143_HUMAN Uncharacterized protein KIAA1143 OS=Homo sapiens GN=KIAA1143 PE=1 SV=2 0.995772 24.8565 0.000252157 108.71 100.18 108.71 1 S VKKNSQKQIKNSSLLSFDNEDENE_______ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPXXXXXXX NS(0.001)S(0.003)LLS(0.996)FDNEDENE NS(-30.1)S(-24.86)LLS(24.86)FDNEDENE 6 2 -1.0725 14623 0 0 17068 0 0 16019 0 0 16658 0 0 15499 0 0 14462 0 0 13984 0 0 18644 0 0 16358 0 0 71915 0 0 13843 0 0 16121 0 0 16041 0 0 17094 0 0 15740 0 0 14782 0 0 14372 0 0 20707 0 0 16039 0 0 68148 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 48752000 48752000 0 0 2.1459 3043 1649 146 146 2939 3118 3338 3700;3701;3702 3338 3701 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19554 3338 3701 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19554 3338 3701 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19554 Q96AY4 28 Q96AY4 Q96AY4 Tetratricopeptide repeat protein 28 TTC28 sp|Q96AY4|TTC28_HUMAN Tetratricopeptide repeat protein 28 OS=Homo sapiens GN=TTC28 PE=1 SV=4 0.99997 45.2101 5.38065E-05 109.71 87.059 109.71 1 S QGPTPARSRRRREPESPPASAPIPLFGADTI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP EPES(1)PPASAPIPLFGADTIGQR EPES(45.21)PPAS(-45.21)APIPLFGADT(-106.07)IGQR 4 3 1.202 3572.1 0 0 3678.7 0 0 4197.2 0 0 3016.8 0 0 3372.5 0 0 3602.5 0 0 3769 0 0 3866.4 0 0 3523.9 0 0 17382 0 0 3382.5 0 0 3471.3 0 0 4181 0 0 3147.3 0 0 3476.5 0 0 3620.9 0 0 3810.8 0 0 4391.8 0 0 3487.5 0 0 16457 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8345600 8345600 0 0 NaN 3044 1650 28 28 1086 1144 1232 1355 1232 1355 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22813 1232 1355 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22813 1232 1355 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22813 Q96B01 120 Q96B01 Q96B01 RAD51-associated protein 1 RAD51AP1 sp|Q96B01|R51A1_HUMAN RAD51-associated protein 1 OS=Homo sapiens GN=RAD51AP1 PE=1 SV=1 1 71.1974 6.18175E-05 124.98 103.73 124.98 1 S LSVKELPTVTTNVQNSQDKSIEKHGSSKIET X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX ELPTVTTNVQNS(1)QDK ELPT(-84.63)VT(-77.77)T(-71.2)NVQNS(71.2)QDK 12 3 1.8089 10026 0 0 7592.8 0 0 8272.1 0 0 7978.4 0 0 10353 0 0 8783.5 0 0 10211 0 0 8616.3 0 0 8437.7 0 0 6073.9 0 0 9480.4 0 0 7174.8 0 0 8455.5 0 0 8181.4 0 0 10380 0 0 8777.6 0 0 10352 0 0 8832.3 0 0 8400.7 0 0 5918.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11574000 11574000 0 0 NaN 3045 1651 120 120 1042 1098 1186 1305 1186 1305 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15005 1186 1305 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15005 1186 1305 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15005 Q96B23 67 Q96B23 Q96B23 Uncharacterized protein C18orf25 C18orf25 sp|Q96B23|CR025_HUMAN Uncharacterized protein C18orf25 OS=Homo sapiens GN=C18orf25 PE=1 SV=2 0.989961 20.564 1.81127E-11 203.29 188.98 203.29 1 S ISSMPCLLMELRRDSSESQLASTESDKPTTG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP DS(0.009)S(0.99)ES(0.001)QLASTESDKPTTGR DS(-20.56)S(20.56)ES(-28.67)QLAS(-89.08)T(-106.56)ES(-132.9)DKPT(-171)T(-174.71)GR 3 3 1.1735 14667 0 0 16940 0 0 14755 0 0 16872 0 0 20844 0 0 15179 0 0 19884 0 0 16738 0 0 17788 0 0 4736.3 0 0 13879 0 0 16002 0 0 14925 0 0 17301 0 0 20778 0 0 15319 0 0 20229 0 0 16872 0 0 17641 0 0 4847.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10993000 10993000 0 0 NaN 3046 1652 67 67 819 867 923 1018 923 1018 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9739 923 1018 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9739 923 1018 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9739 Q96B23 143 Q96B23 Q96B23 Uncharacterized protein C18orf25 C18orf25 sp|Q96B23|CR025_HUMAN Uncharacterized protein C18orf25 OS=Homo sapiens GN=C18orf25 PE=1 SV=2 0.469884 0 0.0341147 59.689 46.262 59.689 S PSGVSGATVGRKSRRSRSESETSTMAAKKNR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX S(0.47)RS(0.47)ES(0.06)ET(0.001)STMAAK S(0)RS(0)ES(-8.97)ET(-29.38)S(-40.45)T(-39.58)MAAK 1 3 -3.3055 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3047 1652 143 143 4279 4559 4859 5391 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6011 4859 5391 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6011 4859 5391 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6011 Q96B23 145 Q96B23 Q96B23 Uncharacterized protein C18orf25 C18orf25 sp|Q96B23|CR025_HUMAN Uncharacterized protein C18orf25 OS=Homo sapiens GN=C18orf25 PE=1 SV=2 0.469884 0 0.0341147 59.689 46.262 59.689 S GVSGATVGRKSRRSRSESETSTMAAKKNRQS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.47)RS(0.47)ES(0.06)ET(0.001)STMAAK S(0)RS(0)ES(-8.97)ET(-29.38)S(-40.45)T(-39.58)MAAK 3 3 -3.3055 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3048 1652 145 145 4279 4559 4859 5391 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6011 4859 5391 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6011 4859 5391 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6011 Q96B45 44 Q96B45 Q96B45 UPF0693 protein C10orf32 C10orf32 sp|Q96B45|CJ032_HUMAN UPF0693 protein C10orf32 OS=Homo sapiens GN=C10orf32 PE=1 SV=1 0.993059 21.5555 3.58433E-06 142.76 89.75 142.76 1 S TDVIALTKQVLKGSRSSELLGQAARNMVLQE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPXXXXXX S(0.993)S(0.007)ELLGQAAR S(21.56)S(-21.56)ELLGQAAR 1 2 -0.52604 31138 0 0 23217 0 0 29612 0 0 24789 0 0 20281 0 0 33569 0 0 19226 0 0 23343 0 0 25452 0 0 5629 0 0 29459 0 0 21941 0 0 29789 0 0 25498 0 0 21123 0 0 33139 0 0 19791 0 0 23981 0 0 24849 0 0 5840.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21138000 21138000 0 0 NaN 3049 1654 44 44 4335 4621 4924 5468 4924 5468 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12304 4924 5468 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12304 4924 5468 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12304 Q96B97 587 Q96B97 Q96B97 SH3 domain-containing kinase-binding protein 1 SH3KBP1 sp|Q96B97|SH3K1_HUMAN SH3 domain-containing kinase-binding protein 1 OS=Homo sapiens GN=SH3KBP1 PE=1 SV=2 0.96438 14.3584 0.00181742 96.718 77.934 96.718 1 S SPLSSSLGTAGHRANSPSLFGTEGKPKMEPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX ANS(0.964)PS(0.035)LFGTEGKPK ANS(14.36)PS(-14.36)LFGT(-35.55)EGKPK 3 3 -0.012977 64007 0 0 7619.5 0 0 64227 0 0 8673.9 0 0 13660 0 0 65645 0 0 15233 0 0 29142 0 0 9916.8 0 0 6695.8 0 0 60568 0 0 7203.9 0 0 64044 0 0 9757.2 0 0 16865 0 0 62811 0 0 15284 0 0 30847 0 0 10010 0 0 6979.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 32056000 32056000 0 0 NaN 3050 1655 587 587 346 372 403 444 403 444 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15307 403 444 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15307 403 444 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15307 Q96B97 79 Q96B97 Q96B97 SH3 domain-containing kinase-binding protein 1 SH3KBP1 sp|Q96B97|SH3K1_HUMAN SH3 domain-containing kinase-binding protein 1 OS=Homo sapiens GN=SH3KBP1 PE=1 SV=2 0.99556 23.5381 3.04008E-05 123.31 107.04 123.31 1 S PLTNKAPEKPLHEVPSGNSLLSSETILRTNK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPPPPXXX APEKPLHEVPS(0.996)GNS(0.004)LLSSETILR APEKPLHEVPS(23.54)GNS(-23.54)LLS(-48.47)S(-47.6)ET(-61.03)ILR 11 3 1.6939 21531 0 0 5283 0 0 21054 0 0 6131.6 0 0 7318.5 0 0 22416 0 0 6138.7 0 0 12928 0 0 6212.1 0 0 30627 0 0 20372 0 0 4995.5 0 0 21057 0 0 6505.6 0 0 8221.3 0 0 21681 0 0 6307.3 0 0 14258 0 0 6126.4 0 0 29138 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29416000 29416000 0 0 NaN 3051 1655 79 79 352 378 410 453 410 453 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19055 410 453 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19055 410 453 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19055 Q96B97 230 Q96B97 Q96B97 SH3 domain-containing kinase-binding protein 1 SH3KBP1 sp|Q96B97|SH3K1_HUMAN SH3 domain-containing kinase-binding protein 1 OS=Homo sapiens GN=SH3KBP1 PE=1 SV=2 1 156.49 5.70436E-07 156.49 114.95 156.49 1 S FGDIFKDKPIKLRPRSIEVENDFLPVEKTIG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX S(1)IEVENDFLPVEK S(156.49)IEVENDFLPVEK 1 2 0.32949 31390 0 0 5254.8 0 0 35606 0 0 6643.2 0 0 11238 0 0 36156 0 0 9816.9 0 0 21189 0 0 6591 0 0 97603 0 0 29719 0 0 4972 0 0 35310 0 0 7210.5 0 0 12820 0 0 34920 0 0 9972.7 0 0 24775 0 0 6640.1 0 0 92395 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 15155000 15155000 0 0 NaN 3052 1655 230 230 3842 4095 4370 4859;4860 4370 4860 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22118 4370 4860 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22118 4370 4860 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22118 Q96BK5 163 Q96BK5 Q96BK5 PIN2/TERF1-interacting telomerase inhibitor 1 PINX1 sp|Q96BK5|PINX1_HUMAN PIN2/TERF1-interacting telomerase inhibitor 1 OS=Homo sapiens GN=PINX1 PE=1 SV=2 0.352235 0 1.6099E-05 131.38 117.94 131.38 S GKRQSKKTPEGDASPSTPEENETTTTSAFTI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPPPPPP KT(0.011)PEGDAS(0.285)PS(0.352)T(0.352)PEENETTTTSAFTIQEYFAK KT(-15.23)PEGDAS(-0.92)PS(0)T(0)PEENET(-55.12)T(-66.39)T(-74.39)T(-82.68)S(-82.18)AFT(-89.25)IQEY(-117.36)FAK 10 4 -0.4261 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3053 1656 163 163 2248 2376 2557 2854 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21819 2557 2854 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21819 2557 2854 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21819 Q96BY6 1451 Q96BY6 Q96BY6 Dedicator of cytokinesis protein 10 DOCK10 sp|Q96BY6|DOC10_HUMAN Dedicator of cytokinesis protein 10 OS=Homo sapiens GN=DOCK10 PE=1 SV=3 1 67.2066 0.022273 67.207 33.021 67.207 1 S HRSQTLPIIRGKNALSNPKLLQMLDNTMTSN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX NALS(1)NPK NALS(67.21)NPK 4 2 2.8741 35255 0 0 11529 0 0 33564 0 0 13676 0 0 11772 0 0 33933 0 0 11087 0 0 20700 0 0 13487 0 0 3837.7 0 0 33354 0 0 10904 0 0 33626 0 0 14237 0 0 13225 0 0 32950 0 0 11384 0 0 21392 0 0 13206 0 0 4092.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19045000 19045000 0 0 NaN 3054 1657 1451 1451 2774 2943 3153 3503 3153 3503 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9859 3153 3503 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9859 3153 3503 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9859 Q96BY7 497 Q96BY7 Q96BY7 Autophagy-related protein 2 homolog B ATG2B sp|Q96BY7|ATG2B_HUMAN Autophagy-related protein 2 homolog B OS=Homo sapiens GN=ATG2B PE=1 SV=5 0.996395 24.4164 5.42501E-07 152.86 124.31 152.86 1 S HPTPLQKTSLPSRSVSVDESRPELIFRLAVG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX S(0.004)VS(0.996)VDESRPELIFR S(-24.42)VS(24.42)VDES(-60.93)RPELIFR 3 3 -1.4393 5765.2 0 0 5268.3 0 0 6334.5 0 0 5793.7 0 0 7560.8 0 0 5383.4 0 0 8035.4 0 0 6170.4 0 0 5824.8 0 0 6282.9 0 0 5457.5 0 0 4979.8 0 0 6361.6 0 0 5910.2 0 0 7604.9 0 0 5436.1 0 0 8096 0 0 6348.2 0 0 5841.1 0 0 6058.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9801700 9801700 0 0 NaN 3055 1658 497 497 4578 4883 5201 5776 5201 5776 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17775 5201 5776 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17775 5201 5776 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17775 Q96C19 74 Q96C19 Q96C19 EF-hand domain-containing protein D2 EFHD2 sp|Q96C19|EFHD2_HUMAN EF-hand domain-containing protein D2 OS=Homo sapiens GN=EFHD2 PE=1 SV=1 0.978435 16.5679 0.00591029 87.659 65.126 87.659 1 S LLRRADLNQGIGEPQSPSRRVFNPYTEFKEF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPXXXXXXXXXXX RADLNQGIGEPQS(0.978)PS(0.022)R RADLNQGIGEPQS(16.57)PS(-16.57)R 13 3 2.3019 22675 0 0 19314 0 0 22063 0 0 19804 0 0 17410 0 0 22882 0 0 17210 0 0 18320 0 0 20968 0 0 10410 0 0 21454 0 0 18248 0 0 22194 0 0 20354 0 0 17943 0 0 22761 0 0 17631 0 0 18867 0 0 20530 0 0 10227 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 40806000 40806000 0 0 NaN 3056 1659 74 74 3177;3178 3370;3371 3602;3603 3992;3993 3602 3992 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9287 3602 3992 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9287 3602 3992 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9287 Q96C36 304 Q96C36 Q96C36 Pyrroline-5-carboxylate reductase 2 PYCR2 sp|Q96C36|P5CR2_HUMAN Pyrroline-5-carboxylate reductase 2 OS=Homo sapiens GN=PYCR2 PE=1 SV=1 0.735765 4.56231 8.59827E-05 114.4 72.306 114.4 1 S RVKLESPTVSTLTPSSPGKLLTRSLALGGKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPXXXXXXXXXXXX LESPTVSTLT(0.007)PS(0.257)S(0.736)PGK LES(-71.77)PT(-65.49)VS(-50.71)T(-42.8)LT(-20.31)PS(-4.56)S(4.56)PGK 13 3 0.13516 7273.3 0 0 8946.8 0 0 8449.3 0 0 11934 0 0 6482.9 0 0 6823.8 0 0 6582.7 0 0 7999.9 0 0 10684 0 0 9496.4 0 0 6886.8 0 0 8468.7 0 0 8416.4 0 0 11989 0 0 6700.3 0 0 7100.6 0 0 6808.2 0 0 8265.1 0 0 10368 0 0 9127.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9267100 9267100 0 0 NaN 3057 1660 304 304 2341 2474 2663 2975 2663 2975 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16951 2663 2975 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16951 2663 2975 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16951 Q96C57 138 Q96C57 Q96C57 Uncharacterized protein C12orf43 C12orf43 sp|Q96C57|CL043_HUMAN Uncharacterized protein C12orf43 OS=Homo sapiens GN=C12orf43 PE=1 SV=2 1 79.0038 0.00698654 79.004 60.171 79.004 1 S RLFFTSVPGGREKEESPQPRRKRQPSSSSED X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX EKEES(1)PQPR EKEES(79)PQPR 5 3 -0.18585 17825 0 0 13894 0 0 20593 0 0 14413 0 0 16502 0 0 19636 0 0 13574 0 0 17655 0 0 15071 0 0 4967.8 0 0 16877 0 0 13128 0 0 20521 0 0 14851 0 0 16948 0 0 19434 0 0 13998 0 0 17936 0 0 14807 0 0 5086.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 90620000 90620000 0 0 NaN 3058 1661 138 138 1010 1066 1153 1271 1153 1271 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5917 1153 1271 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5917 1153 1271 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5917 Q96C90 142 Q96C90 Q96C90 Protein phosphatase 1 regulatory subunit 14B PPP1R14B sp|Q96C90|PP14B_HUMAN Protein phosphatase 1 regulatory subunit 14B OS=Homo sapiens GN=PPP1R14B PE=1 SV=3 0.898384 9.46498 0.0178416 63.216 22.492 63.216 1 S FISGLLDKIRGMQKLSTPQKK__________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPXXXXXXXXXX LS(0.898)T(0.102)PQKK LS(9.46)T(-9.46)PQKK 2 3 0.36208 19636 0 0 25467 0 0 22000 0 0 23565 0 0 15592 0 0 22635 0 0 16344 0 0 22260 0 0 26675 0 0 2467.8 0 0 18589 0 0 24047 0 0 21940 0 0 24297 0 0 16221 0 0 22730 0 0 16884 0 0 22417 0 0 25882 0 0 2838.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 148570000 148570000 0 0 NaN 3059 1662 142 142 2604 2750 2949 3286 2949 3286 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10016 2949 3286 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10016 2949 3286 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10016 Q96CB8 128 Q96CB8 Q96CB8 Integrator complex subunit 12 INTS12 sp|Q96CB8|INT12_HUMAN Integrator complex subunit 12 OS=Homo sapiens GN=INTS12 PE=1 SV=1 0.916039 10.3934 3.44366E-11 202.66 174.45 202.66 1 S DIPKKPRLEKPETQSSPITVQSSKDLPMADL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPXXXXXXX LEKPETQS(0.084)S(0.916)PITVQSSK LEKPET(-35.07)QS(-10.39)S(10.39)PIT(-52.51)VQS(-83.32)S(-96.94)K 9 3 -0.85378 25066 0 0 23179 0 0 29703 0 0 23475 0 0 25074 0 0 26981 0 0 23175 0 0 27879 0 0 29245 0 0 8564.8 0 0 23736 0 0 21898 0 0 29583 0 0 24142 0 0 25698 0 0 26916 0 0 23847 0 0 28188 0 0 28599 0 0 8710 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 36173000 36173000 0 0 NaN 3060 1663 128 128 2330 2463 2652 2964 2652 2964 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13998 2652 2964 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13998 2652 2964 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13998 Q96CB8 378 Q96CB8 Q96CB8 Integrator complex subunit 12 INTS12 sp|Q96CB8|INT12_HUMAN Integrator complex subunit 12 OS=Homo sapiens GN=INTS12 PE=1 SV=1 0.641047 2.53027 7.33932E-06 145.29 107.74 145.29 1 S PPPLTLGKTGLSRSVSCDNVSKVGLPSPSSL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX S(0.358)VS(0.641)CDNVS(0.001)K S(-2.53)VS(2.53)CDNVS(-28.2)K 3 2 -1.2137 43920 0 0 38966 0 0 43904 0 0 37079 0 0 38668 0 0 40839 0 0 42935 0 0 41715 0 0 38162 0 0 7395.6 0 0 41560 0 0 36799 0 0 44154 0 0 38247 0 0 39606 0 0 40792 0 0 43368 0 0 42032 0 0 37857 0 0 7929.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 117290000 117290000 0 0 NaN 3061 1663 378 378 4564 4868 5185 5757 5185 5757 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9227 5185 5757 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9227 5185 5757 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9227 Q96CT7 141 Q96CT7 Q96CT7 Coiled-coil domain-containing protein 124 CCDC124 sp|Q96CT7|CC124_HUMAN Coiled-coil domain-containing protein 124 OS=Homo sapiens GN=CCDC124 PE=1 SV=1 1 115.037 0.000286296 115.04 74.504 115.04 1 S VPLEENVNRRVLEEGSVEARTIEDAIAVLSV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX VLEEGS(1)VEAR VLEEGS(115.04)VEAR 6 2 -0.12108 30895 0 0 16229 0 0 28287 0 0 17097 0 0 38895 0 0 26870 0 0 35794 0 0 26827 0 0 15513 0 0 7891.4 0 0 29225 0 0 15336 0 0 28758 0 0 17658 0 0 38781 0 0 26512 0 0 36029 0 0 27149 0 0 16167 0 0 8051.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27984000 27984000 0 0 NaN 3062 1664 141 141 5159 5497 5858 6511 5858 6511 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12122 5858 6511 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12122 5858 6511 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12122 Q96CW5 896 Q96CW5 Q96CW5 Gamma-tubulin complex component 3 TUBGCP3 sp|Q96CW5|GCP3_HUMAN Gamma-tubulin complex component 3 OS=Homo sapiens GN=TUBGCP3 PE=1 SV=2 0.998555 28.3955 0.012824 64.82 39.965 64.82 1 S DFNEHYKAREPRLRVSLGTRGRRSSHT____ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX LRVS(0.999)LGT(0.001)R LRVS(28.4)LGT(-28.4)R 4 3 -0.1666 5869.2 0 0 5643.5 0 0 5315.7 0 0 5542 0 0 6316.6 0 0 5624.2 0 0 5692.3 0 0 5215.7 0 0 5471.1 0 0 1721.1 0 0 5551.7 0 0 5330.6 0 0 5395.5 0 0 5697.8 0 0 6342 0 0 5631.9 0 0 5818.2 0 0 5299.4 0 0 5407.7 0 0 1741.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8049000 8049000 0 0 NaN 3063 1665 896 896 2545 2689 2886 3218 2886 3218 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13599 2886 3218 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13599 2886 3218 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13599 Q96D71 143 Q96D71 Q96D71 RalBP1-associated Eps domain-containing protein 1 REPS1 sp|Q96D71|REPS1_HUMAN RalBP1-associated Eps domain-containing protein 1 OS=Homo sapiens GN=REPS1 PE=1 SV=3 0.991971 20.968 0.0473443 43.794 29.104 43.794 1 S GVIPPPPGRGQVKKGSVSHDTVQPRTSADAQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX KGS(0.992)VS(0.008)HDTVQPR KGS(20.97)VS(-20.97)HDT(-40.35)VQPR 3 3 -0.26021 9737.8 0 0 11198 0 0 10617 0 0 12587 0 0 10426 0 0 12905 0 0 17943 0 0 17635 0 0 10509 0 0 3274.4 0 0 9217.8 0 0 10586 0 0 10652 0 0 12844 0 0 10691 0 0 12987 0 0 17700 0 0 17604 0 0 10684 0 0 3491.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9212200 9212200 0 0 NaN 3064 1666 143 143 2083 2203 2372 2642 2372 2642 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6746 2372 2642 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6746 2372 2642 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6746 Q96D71 562 Q96D71 Q96D71 RalBP1-associated Eps domain-containing protein 1 REPS1 sp|Q96D71|REPS1_HUMAN RalBP1-associated Eps domain-containing protein 1 OS=Homo sapiens GN=REPS1 PE=1 SV=3 0.899965 11.0655 1.65829E-05 157.75 111.28 157.75 1 S PPPPPRPQPSHSRSSSLDMNRTFTVTTGQQQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX S(0.03)S(0.07)S(0.9)LDMNR S(-14.83)S(-11.07)S(11.07)LDMNR 3 2 -0.50712 54454 0 0 34468 0 0 49324 0 0 34649 0 0 48211 0 0 55678 0 0 56101 0 0 49014 0 0 37599 0 0 7834.3 0 0 51508 0 0 32562 0 0 49963 0 0 35903 0 0 49084 0 0 54802 0 0 56221 0 0 49659 0 0 37884 0 0 8511.3 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 137390000 137390000 0 0 NaN 3065 1666 562 562 4427 4717;4718 5021;5022 5570;5571 5022 5571 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8497 5022 5571 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8497 5022 5571 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8497 Q96D71 428 Q96D71 Q96D71 RalBP1-associated Eps domain-containing protein 1 REPS1 sp|Q96D71|REPS1_HUMAN RalBP1-associated Eps domain-containing protein 1 OS=Homo sapiens GN=REPS1 PE=1 SV=3 0.360533 0 1.99872E-25 257.32 243.8 257.32 S ELNQSSEQWETFSERSSSSQTLTQFDSNIAP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.361)S(0.361)S(0.268)S(0.011)QTLTQFDSNIAPADPDTAIVHPVPIR S(0)S(0)S(-1.29)S(-15.26)QT(-32.25)LT(-85.14)QFDS(-171.46)NIAPADPDT(-241.8)AIVHPVPIR 1 3 0.35815 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3066 1666 428 428 4465 4756 5061 5616 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20141 5061 5616 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20141 5061 5616 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20141 Q96D71 429 Q96D71 Q96D71 RalBP1-associated Eps domain-containing protein 1 REPS1 sp|Q96D71|REPS1_HUMAN RalBP1-associated Eps domain-containing protein 1 OS=Homo sapiens GN=REPS1 PE=1 SV=3 0.360533 0 1.99872E-25 257.32 243.8 257.32 S LNQSSEQWETFSERSSSSQTLTQFDSNIAPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.361)S(0.361)S(0.268)S(0.011)QTLTQFDSNIAPADPDTAIVHPVPIR S(0)S(0)S(-1.29)S(-15.26)QT(-32.25)LT(-85.14)QFDS(-171.46)NIAPADPDT(-241.8)AIVHPVPIR 2 3 0.35815 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3067 1666 429 429 4465 4756 5061 5616 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20141 5061 5616 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20141 5061 5616 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20141 Q96D71 430 Q96D71 Q96D71 RalBP1-associated Eps domain-containing protein 1 REPS1 sp|Q96D71|REPS1_HUMAN RalBP1-associated Eps domain-containing protein 1 OS=Homo sapiens GN=REPS1 PE=1 SV=3 0.350241 0.954 7.54168E-18 221.64 210.35 221.64 S NQSSEQWETFSERSSSSQTLTQFDSNIAPAD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.281)S(0.281)S(0.35)S(0.087)QT(0.001)LTQFDSNIAPADPDTAIVHPVPIR S(-0.95)S(-0.95)S(0.95)S(-6.07)QT(-26.45)LT(-75.79)QFDS(-147.12)NIAPADPDT(-206.12)AIVHPVPIR 3 4 0.59808 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3068 1666 430 430 4465 4756 5062 5617 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20153 5062 5617 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20153 5062 5617 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20153 Q96DF8 292 Q96DF8 Q96DF8 Protein DGCR14 DGCR14 sp|Q96DF8|DGC14_HUMAN Protein DGCR14 OS=Homo sapiens GN=DGCR14 PE=1 SV=1 1 128.081 0.000201221 128.08 93.326 128.08 1 S QGKVGPDGKELIPQESPRVGGFGFVATPSPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX ELIPQES(1)PR ELIPQES(128.08)PR 7 2 0.095521 18375 0 0 25188 0 0 18088 0 0 24281 0 0 15891 0 0 19398 0 0 17566 0 0 19544 0 0 24417 0 0 8671.1 0 0 17387 0 0 23789 0 0 18207 0 0 24908 0 0 16286 0 0 19680 0 0 17988 0 0 19860 0 0 23801 0 0 8617.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 38583000 38583000 0 0 NaN 3069 1667 292 292 1035 1091 1179 1298 1179 1298 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13559 1179 1298 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13559 1179 1298 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13559 Q96E09 143 Q96E09 Q96E09 Protein FAM122A FAM122A sp|Q96E09|F122A_HUMAN Protein FAM122A OS=Homo sapiens GN=FAM122A PE=1 SV=1 0.999998 56.7392 0.00472102 87.326 68.749 87.326 2 S VEKSASPKRIDFIPVSPAPSPTRGIGKQCFS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPXXXXXXXX RIDFIPVS(1)PAPS(0.971)PT(0.029)R RIDFIPVS(56.74)PAPS(15.18)PT(-15.18)R 8 3 -0.45795 0 8765.4 0 0 9620.4 0 0 8920 0 0 11311 0 0 11575 0 0 7500.8 0 0 12272 0 0 9733.4 0 0 9797.5 0 0 15025 0 0 8294.9 0 0 9097.7 0 0 9006.9 0 0 11450 0 0 11597 0 0 7744.7 0 0 12390 0 0 10130 0 0 9772.1 0 0 14373 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 12752000 0 12752000 0 NaN 3070 1668 143 143 3270 3468;3469 3706 4115;4116 3706 4116 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19693 3706 4116 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19693 3706 4116 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19693 Q96E09 147 Q96E09 Q96E09 Protein FAM122A FAM122A sp|Q96E09|F122A_HUMAN Protein FAM122A OS=Homo sapiens GN=FAM122A PE=1 SV=1 0.970558 15.1806 9.30427E-07 138.82 125.79 87.326 1;2 S ASPKRIDFIPVSPAPSPTRGIGKQCFSPSLQ X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX RIDFIPVS(1)PAPS(0.971)PT(0.029)R RIDFIPVS(56.74)PAPS(15.18)PT(-15.18)R 12 3 -0.45795 6414 8765.4 0 6977.6 9620.4 0 5816 8920 0 6344.8 11311 0 5872.5 11575 0 6589.8 7500.8 0 5764.4 12272 0 5360 9733.4 0 5640.2 9797.5 0 4734.4 15025 0 6067 8294.9 0 6587.9 9097.7 0 5891.3 9006.9 0 6557.2 11450 0 5954.4 11597 0 6587.9 7744.7 0 5869.4 12390 0 5566.7 10130 0 5570.4 9772.1 0 4582.1 14373 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 41878000 29126000 12752000 0 NaN 3071 1668 147 147 3270 3468;3469 3705;3706 4114;4115;4116 3706 4116 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19693 3705 4114 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18387 3705 4114 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18387 Q96E09 37 Q96E09 Q96E09 Protein FAM122A FAM122A sp|Q96E09|F122A_HUMAN Protein FAM122A OS=Homo sapiens GN=FAM122A PE=1 SV=1 0.607394 1.89514 1.89011E-24 255.95 230.5 255.95 1 S EGGGSGGGGGLRRSNSAPLIHGLSDTSPVFQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.393)NS(0.607)APLIHGLSDTSPVFQAEAPSAR S(-1.9)NS(1.9)APLIHGLS(-59.1)DT(-82.94)S(-102.13)PVFQAEAPS(-210.64)AR 3 3 -0.69606 4457.2 0 0 5569.3 0 0 4306.7 0 0 6332.2 0 0 4056.7 0 0 5217.7 0 0 6360.3 0 0 6618.5 0 0 6625.6 0 0 20011 0 0 4217.1 0 0 5265.5 0 0 4346.5 0 0 6437.2 0 0 4164.3 0 0 5334.9 0 0 6370.9 0 0 7187.6 0 0 6526.2 0 0 18996 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 91396000 91396000 0 0 NaN 3072 1668 37 37 4051 4319 4608 5118 4608 5118 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19685 4608 5118 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19685 4608 5118 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19685 Q96E09 189 Q96E09 Q96E09 Protein FAM122A FAM122A sp|Q96E09|F122A_HUMAN Protein FAM122A OS=Homo sapiens GN=FAM122A PE=1 SV=1 0.999738 35.8194 1.5973E-05 132.72 117.84 132.72 1 S PIPSPTTRFTTRRSQSPINCIRPSVLGPLKR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP SQS(1)PINCIRPSVLGPLK S(-35.82)QS(35.82)PINCIRPS(-66.87)VLGPLK 3 3 -0.4784 27606 0 0 37527 0 0 30789 0 0 36798 0 0 28100 0 0 27802 0 0 27560 0 0 33999 0 0 40193 0 0 18167 0 0 26135 0 0 35446 0 0 30786 0 0 37683 0 0 28679 0 0 28381 0 0 28426 0 0 34410 0 0 39122 0 0 17893 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 60069000 60069000 0 0 NaN 3073 1668 189 189 4245;4246 4523;4524 4820;4821 5350;5351 4820 5350 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19097 4820 5350 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19097 4820 5350 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19097 Q96E09 270 Q96E09 Q96E09 Protein FAM122A FAM122A sp|Q96E09|F122A_HUMAN Protein FAM122A OS=Homo sapiens GN=FAM122A PE=1 SV=1 0.4158 0.967201 0.0253275 57.443 42.353 57.443 S CNSPAKVSTTTDSPVSPAQAASPFIPLDELS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPPPPPP VS(0.042)T(0.042)T(0.042)T(0.123)DS(0.333)PVS(0.416)PAQAAS(0.001)PFIPLDELSSK VS(-9.91)T(-9.91)T(-9.91)T(-5.27)DS(-0.97)PVS(0.97)PAQAAS(-28.67)PFIPLDELS(-46.74)S(-46.54)K 10 3 0.51264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3074 1668 270 270 5284 5631 6002 6668 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23614 6002 6668 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23614 6002 6668 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23614 Q96E39 161 Q96E39 Q96E39 RNA binding motif protein, X-linked-like-1 RBMXL1 sp|Q96E39|RMXL1_HUMAN RNA binding motif protein, X-linked-like-1 OS=Homo sapiens GN=RBMXL1 PE=1 SV=1 0.999933 41.7383 0.021846 68.786 17.994 68.786 1 S PLPVKRGPPPRSGGPSPKRSAPSGLVRSSSG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX SGGPS(1)PKR S(-41.74)GGPS(41.74)PKR 5 2 0.25012 7706.1 0 0 10870 0 0 7340.8 0 0 9231.7 0 0 8134.4 0 0 7445.8 0 0 7615.9 0 0 8749.1 0 0 10547 0 0 2437.4 0 0 7290.5 0 0 10260 0 0 7421.5 0 0 9550.1 0 0 8203.4 0 0 7563.9 0 0 7857.5 0 0 8798.9 0 0 10283 0 0 2497.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10919000 10919000 0 0 NaN 3075 1669 161 161 3786 4033 4302 4781 4302 4781 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5603 4302 4781 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5603 4302 4781 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5603 Q96EB6 47 Q96EB6 Q96EB6 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment SIRT1 sp|Q96EB6|SIR1_HUMAN NAD-dependent protein deacetylase sirtuin-1 OS=Homo sapiens GN=SIRT1 PE=1 SV=2 1 99.5681 0.00123138 99.568 63.011 99.568 1 S PLRKRPRRDGPGLERSPGEPGGAAPEREVPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(1)PGEPGGAAPER S(99.57)PGEPGGAAPER 1 2 -0.97538 10826 0 0 10278 0 0 9660.5 0 0 9623.4 0 0 6647.1 0 0 10345 0 0 6843.3 0 0 10440 0 0 10781 0 0 2980.5 0 0 10240 0 0 9705.9 0 0 9758.1 0 0 9932.6 0 0 6930 0 0 10344 0 0 7064.3 0 0 10558 0 0 10470 0 0 3048.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10085000 10085000 0 0 NaN 3076 1670 47 47 4101 4372 4662 5176 4662 5176 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6503 4662 5176 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6503 4662 5176 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6503 Q96EP0 466 Q96EP0 Q96EP0 E3 ubiquitin-protein ligase RNF31 RNF31 sp|Q96EP0|RNF31_HUMAN E3 ubiquitin-protein ligase RNF31 OS=Homo sapiens GN=RNF31 PE=1 SV=1 0.999938 42.0745 6.11656E-07 151.57 115.91 151.57 1 S SLEKGPPKPGPPRRLSAPLPSSCGDPEKQRQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX RLS(1)APLPSSCGDPEK RLS(42.07)APLPS(-42.07)S(-63.92)CGDPEK 3 3 1.2269 21333 0 0 11652 0 0 20479 0 0 13826 0 0 24959 0 0 23807 0 0 28350 0 0 21320 0 0 13805 0 0 22655 0 0 20183 0 0 11019 0 0 20732 0 0 14224 0 0 25098 0 0 23429 0 0 28297 0 0 22165 0 0 14238 0 0 21826 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 71603000 71603000 0 0 NaN 3077 1671 466 466 3318 3520 3757 4173 3757 4173 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13657 3757 4173 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13657 3757 4173 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13657 Q96ER3 6 Q96ER3 Q96ER3 Protein SAAL1 SAAL1 sp|Q96ER3|SAAL1_HUMAN Protein SAAL1 OS=Homo sapiens GN=SAAL1 PE=1 SV=2 1 83.2035 1.73761E-07 83.204 57.192 83.204 1 S __________MDRNPSPPPPGRDKEEEEEVA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX MDRNPS(1)PPPPGR MDRNPS(83.2)PPPPGR 6 2 -0.4583 4686.8 0 0 5095.1 0 0 5790.4 0 0 4768.3 0 0 5405 0 0 5251.7 0 0 4299.7 0 0 5516.8 0 0 5105.2 0 0 3954.2 0 0 4439 0 0 4811.3 0 0 5760.3 0 0 4923.7 0 0 5492.9 0 0 5253.3 0 0 4451.9 0 0 5642.6 0 0 5003.2 0 0 3851 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10219000 10219000 0 0 NaN 3078 1672 6 6 2674 2826 3031 3376 3031 3376 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7128 3031 3376 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7128 3031 3376 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7128 Q96EU6 73 Q96EU6 Q96EU6 Ribosomal RNA processing protein 36 homolog RRP36 sp|Q96EU6|RRP36_HUMAN Ribosomal RNA processing protein 36 homolog OS=Homo sapiens GN=RRP36 PE=1 SV=1 1 110.438 0.000236406 110.44 72.145 110.44 1 S SQVGTKTYKQLVAGNSPKKQASRPPIQNACV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX QLVAGNS(1)PKK QLVAGNS(110.44)PKK 7 3 0.56436 141060 0 0 144560 0 0 136670 0 0 135350 0 0 82752 0 0 126340 0 0 76567 0 0 127930 0 0 150940 0 0 24523 0 0 133460 0 0 136500 0 0 137200 0 0 139390 0 0 87143 0 0 127100 0 0 80272 0 0 129000 0 0 145780 0 0 26052 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 123260000 123260000 0 0 NaN 3079 1673 73 73 3083;3084 3269;3270 3497;3498;3499 3873;3874;3875 3499 3875 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10831 3499 3875 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10831 3499 3875 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10831 Q96EV2 741 Q96EV2 Q96EV2 RNA-binding protein 33 RBM33 sp|Q96EV2|RBM33_HUMAN RNA-binding protein 33 OS=Homo sapiens GN=RBM33 PE=1 SV=3 0.988316 21.0106 1.39891E-07 143.54 124.61 143.54 1 S CSATPSAQVKPIVSASPPSRAVAGSRSSQGK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX CSATPSAQVKPIVS(0.004)AS(0.988)PPS(0.008)R CS(-123.06)AT(-109.11)PS(-98.44)AQVKPIVS(-24.09)AS(21.01)PPS(-21.01)R 16 3 0.88704 13872 0 0 12356 0 0 13892 0 0 12670 0 0 12311 0 0 15885 0 0 11730 0 0 14987 0 0 13690 0 0 8682.3 0 0 13127 0 0 11674 0 0 13967 0 0 13042 0 0 12580 0 0 15784 0 0 12022 0 0 15329 0 0 13425 0 0 8522.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15975000 15975000 0 0 NaN 3080 1674 741 741 619 659 702 778 702 778 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13265 702 778 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13265 702 778 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13265 Q96EV2 765 Q96EV2 Q96EV2 RNA-binding protein 33 RBM33 sp|Q96EV2|RBM33_HUMAN RNA-binding protein 33 OS=Homo sapiens GN=RBM33 PE=1 SV=3 1 128.439 4.84114E-05 128.44 99.111 128.44 1 S SRSSQGKTEVKVKPASPVAQPKEEAKTETEF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX VKPAS(1)PVAQPK VKPAS(128.44)PVAQPK 5 3 0.069465 82320 0 0 103230 0 0 78273 0 0 94244 0 0 86551 0 0 76864 0 0 89494 0 0 97011 0 0 114890 0 0 15862 0 0 77881 0 0 97469 0 0 79156 0 0 97037 0 0 87409 0 0 78103 0 0 91651 0 0 97006 0 0 112290 0 0 17181 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 246030000 246030000 0 0 NaN 3081 1674 765 765 5146 5483 5840 6492 5840 6492 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10737 5840 6492 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10737 5840 6492 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10737 Q96EY5 230 Q96EY5 Q96EY5 Multivesicular body subunit 12A MVB12A sp|Q96EY5|MB12A_HUMAN Multivesicular body subunit 12A OS=Homo sapiens GN=MVB12A PE=1 SV=1 0.562634 1.09384 0.000115843 105.91 86.166 105.91 1 S MDGVPFTLHPRFEGKSCSPLAFSAFGDLTIK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.563)CS(0.437)PLAFSAFGDLTIK S(1.09)CS(-1.09)PLAFS(-53.38)AFGDLT(-95.85)IK 1 3 -0.29978 8331.7 0 0 11560 0 0 9569.3 0 0 10321 0 0 9115.5 0 0 8229.4 0 0 7091.7 0 0 11177 0 0 10417 0 0 51113 0 0 7888.6 0 0 10914 0 0 9555.2 0 0 10639 0 0 9251.7 0 0 8475.3 0 0 7407 0 0 12637 0 0 10137 0 0 48388 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 70992000 70992000 0 0 NaN 3082 1675 230 230 3648 3878 4132 4591 4132 4591 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23838 4132 4591 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23838 4132 4591 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23838 Q96F86 131 Q96F86 Q96F86 Enhancer of mRNA-decapping protein 3 EDC3 sp|Q96F86|EDC3_HUMAN Enhancer of mRNA-decapping protein 3 OS=Homo sapiens GN=EDC3 PE=1 SV=1 0.999995 52.6305 1.87357E-10 177.4 152.61 177.4 1 S NIPKRTDVKSQDVAVSPQQQQCSKSYVDRHM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPXXXXXXX SQDVAVS(1)PQQQQCSK S(-52.63)QDVAVS(52.63)PQQQQCS(-131.12)K 7 3 0.48165 43983 0 0 64761 0 0 39620 0 0 66124 0 0 64110 0 0 41458 0 0 67128 0 0 55837 0 0 75233 0 0 9601.2 0 0 41603 0 0 61185 0 0 40452 0 0 67415 0 0 63663 0 0 42855 0 0 68408 0 0 55741 0 0 73888 0 0 10333 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 136620000 136620000 0 0 NaN 3083 1676 131 131 4220 4498 4794 5320 4794 5320 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8956 4794 5320 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8956 4794 5320 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8956 Q96FF9 21 Q96FF9 Q96FF9 Sororin CDCA5 sp|Q96FF9|CDCA5_HUMAN Sororin OS=Homo sapiens GN=CDCA5 PE=1 SV=1 0.826188 6.77 0.00444325 87.641 47.574 87.641 1 S TRSGGAAQRSGPRAPSPTKPLRRSQRKSGSE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX APS(0.826)PT(0.174)KPLR APS(6.77)PT(-6.77)KPLR 3 3 0.47885 15157 0 0 28701 0 0 15929 0 0 27357 0 0 13302 0 0 17173 0 0 15655 0 0 19401 0 0 30841 0 0 3253.4 0 0 14346 0 0 27105 0 0 15967 0 0 28007 0 0 13701 0 0 17702 0 0 16238 0 0 19472 0 0 29787 0 0 3512.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 32816000 32816000 0 0 NaN 3084 1677 21 21 375 401 436 484 436 484 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10140 436 484 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10140 436 484 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10140 Q96FF9 75 Q96FF9 Q96FF9 Sororin CDCA5 sp|Q96FF9|CDCA5_HUMAN Sororin OS=Homo sapiens GN=CDCA5 PE=1 SV=1 1 87.3557 0.00522446 87.356 68.07 87.356 1 S LKRIVAHAVEVPAVQSPRRSPRISFFLEKEN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPXXXXXXXXXXXXX IVAHAVEVPAVQS(1)PR IVAHAVEVPAVQS(87.36)PR 13 3 -0.33345 6918.3 0 0 7963.7 0 0 6786.1 0 0 7883 0 0 6108.4 0 0 6981.4 0 0 6221.3 0 0 7580.3 0 0 9304.1 0 0 4453.4 0 0 6545.9 0 0 7522.6 0 0 6832.8 0 0 8084.4 0 0 6243.3 0 0 7053.9 0 0 6411.8 0 0 7714.6 0 0 9049.6 0 0 4368.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11627000 11627000 0 0 NaN 3085 1677 75 75 1972 2085 2249 2511 2249 2511 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15025 2249 2511 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15025 2249 2511 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15025 Q96FF9 33 Q96FF9 Q96FF9 Sororin CDCA5 sp|Q96FF9|CDCA5_HUMAN Sororin OS=Homo sapiens GN=CDCA5 PE=1 SV=1 0.499932 0 1.56557E-10 183.31 157.99 183.31 1 S RAPSPTKPLRRSQRKSGSELPSILPEIWPKT X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPX S(0.5)GS(0.5)ELPSILPEIWPK S(0)GS(0)ELPS(-35.67)ILPEIWPK 1 3 0.61622 8319.9 0 0 9731.6 0 0 7479.7 0 0 10793 0 0 7919.1 0 0 7810.2 0 0 7268.7 0 0 9653.8 0 0 10820 0 0 22093 0 0 7869.6 0 0 9199.2 0 0 7584 0 0 10969 0 0 8004.5 0 0 8026.4 0 0 7527.4 0 0 10278 0 0 10525 0 0 21026 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19965000 19965000 0 0 NaN 3086 1677 33 33 3803 4051 4322 4802 4322 4802 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24061 4322 4802 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24061 4322 4802 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24061 Q96FF9 35 Q96FF9 Q96FF9 Sororin CDCA5 sp|Q96FF9|CDCA5_HUMAN Sororin OS=Homo sapiens GN=CDCA5 PE=1 SV=1 0.499932 0 1.56557E-10 183.31 157.99 183.31 1 S PSPTKPLRRSQRKSGSELPSILPEIWPKTPS X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.5)GS(0.5)ELPSILPEIWPK S(0)GS(0)ELPS(-35.67)ILPEIWPK 3 3 0.61622 8319.9 0 0 9731.6 0 0 7479.7 0 0 10793 0 0 7919.1 0 0 7810.2 0 0 7268.7 0 0 9653.8 0 0 10820 0 0 22093 0 0 7869.6 0 0 9199.2 0 0 7584 0 0 10969 0 0 8004.5 0 0 8026.4 0 0 7527.4 0 0 10278 0 0 10525 0 0 21026 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19965000 19965000 0 0 NaN 3087 1677 35 35 3803 4051 4322 4802 4322 4802 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24061 4322 4802 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24061 4322 4802 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24061 Q96FS4 74 Q96FS4 Q96FS4 Signal-induced proliferation-associated protein 1 SIPA1 sp|Q96FS4|SIPA1_HUMAN Signal-induced proliferation-associated protein 1 OS=Homo sapiens GN=SIPA1 PE=1 SV=1 1 71.8636 5.03822E-05 127.32 102.15 127.32 1 S EARPPTPASPRARAHSHEEASRPAATSTRLF X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX AHS(1)HEEASRPAATSTR AHS(71.86)HEEAS(-71.86)RPAAT(-92.67)S(-96.83)T(-105.65)R 3 4 0.8713 486.64 0 0 448.2 0 0 418.32 0 0 480.35 0 0 1322.8 0 0 239.55 0 0 2084.4 0 0 1122.8 0 0 131.12 0 0 513.36 0 0 460.23 0 0 423.58 0 0 437.66 0 0 487.38 0 0 1297.9 0 0 262.9 0 0 2031.7 0 0 1107.5 0 0 212.22 0 0 509.38 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5285600 5285600 0 0 NaN 3088 1678 74 74 240 255 273 304 273 304 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4522 273 304 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4522 273 304 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4522 Q96FS4 817 Q96FS4 Q96FS4 Signal-induced proliferation-associated protein 1 SIPA1 sp|Q96FS4|SIPA1_HUMAN Signal-induced proliferation-associated protein 1 OS=Homo sapiens GN=SIPA1 PE=1 SV=1 1 96.4602 0.00194727 96.46 86.061 96.46 1 S PTTKQLLHLCLQDGGSPPGPGDLAEERTEFL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPPPPPXXXX QLLHLCLQDGGS(1)PPGPGDLAEER QLLHLCLQDGGS(96.46)PPGPGDLAEER 12 3 0.44016 4075.8 0 0 3799.4 0 0 4761.6 0 0 3992.1 0 0 4595.7 0 0 3485.2 0 0 5189.9 0 0 4541.5 0 0 5237 0 0 31351 0 0 3859.4 0 0 3590.3 0 0 4754.3 0 0 4079 0 0 4682 0 0 3588.3 0 0 5255.6 0 0 5459.1 0 0 5165.4 0 0 29626 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7419300 7419300 0 0 NaN 3089 1678 817 817 3067 3253 3481 3857 3481 3857 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20059 3481 3857 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20059 3481 3857 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20059 Q96FS4 55 Q96FS4 Q96FS4 Signal-induced proliferation-associated protein 1 SIPA1 sp|Q96FS4|SIPA1_HUMAN Signal-induced proliferation-associated protein 1 OS=Homo sapiens GN=SIPA1 PE=1 SV=1 0.70734 3.8327 0.000417273 100.47 77.481 100.47 1 S TFEPRPVRGPLLRSGSDAGEARPPTPASPRA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX S(0.293)GS(0.707)DAGEARPPTPASPR S(-3.83)GS(3.83)DAGEARPPT(-53.31)PAS(-68.11)PR 3 3 -0.23323 30956 0 0 28066 0 0 31918 0 0 27172 0 0 34669 0 0 31983 0 0 34900 0 0 28550 0 0 24342 0 0 5891.9 0 0 29296 0 0 26508 0 0 32118 0 0 28031 0 0 35013 0 0 31811 0 0 35225 0 0 28948 0 0 24466 0 0 6208.7 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 30659000 30659000 0 0 NaN 3090 1678 55 55 3801 4049 4320 4799;4800 4320 4799 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7203 4320 4799 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7203 4320 4799 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7203 Q96FS4 67 Q96FS4 Q96FS4 Signal-induced proliferation-associated protein 1 SIPA1 sp|Q96FS4|SIPA1_HUMAN Signal-induced proliferation-associated protein 1 OS=Homo sapiens GN=SIPA1 PE=1 SV=1 0.968898 14.935 0.00744683 80.98 62.842 80.98 1 S RSGSDAGEARPPTPASPRARAHSHEEASRPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX SGSDAGEARPPT(0.031)PAS(0.969)PR S(-66.2)GS(-61.67)DAGEARPPT(-14.93)PAS(14.93)PR 15 3 -1.8378 7372.4 0 0 8247 0 0 7681.3 0 0 7576.4 0 0 8606 0 0 5691.2 0 0 9021 0 0 8883.1 0 0 7696.4 0 0 3201.2 0 0 6977.3 0 0 7786.8 0 0 7729 0 0 7789.9 0 0 8683.4 0 0 5834.7 0 0 9126.4 0 0 8883.2 0 0 7650.2 0 0 3219.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10873000 10873000 0 0 NaN 3091 1678 67 67 3801 4049 4319 4798 4319 4798 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6998 4319 4798 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6998 4319 4798 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6998 Q96FS4 839 Q96FS4 Q96FS4 Signal-induced proliferation-associated protein 1 SIPA1 sp|Q96FS4|SIPA1_HUMAN Signal-induced proliferation-associated protein 1 OS=Homo sapiens GN=SIPA1 PE=1 SV=1 0.944687 12.3248 0.000155089 104.76 82.891 104.76 1 S LAEERTEFLHSQNSLSPRSSLSDEAPVLPNT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPXXXXXXXXXXXXX TEFLHSQNS(0.055)LS(0.945)PR T(-84.66)EFLHS(-54.38)QNS(-12.32)LS(12.32)PR 11 3 -0.47086 13048 0 0 10705 0 0 12687 0 0 11271 0 0 14294 0 0 12845 0 0 16950 0 0 13584 0 0 12816 0 0 4326.4 0 0 12345 0 0 10116 0 0 12821 0 0 11563 0 0 14444 0 0 12822 0 0 17013 0 0 13727 0 0 12821 0 0 4388.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 68172000 68172000 0 0 NaN 3092 1678 839 839 4681 4992 5317 5909 5317 5909 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12970 5317 5909 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12970 5317 5909 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12970 Q96FV9 2 Q96FV9 Q96FV9 THO complex subunit 1 THOC1 sp|Q96FV9|THOC1_HUMAN THO complex subunit 1 OS=Homo sapiens GN=THOC1 PE=1 SV=1 0.499981 0 0.02262 55.426 40.759 55.426 1 S ______________MSPTPPLFSLPEARTRF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPXXX MS(0.5)PT(0.5)PPLFSLPEAR MS(0)PT(0)PPLFS(-41.19)LPEAR 2 2 0.974 7712.1 0 0 6960.2 0 0 5439.2 0 0 6601.9 0 0 9027.9 0 0 6656.7 0 0 9041.1 0 0 7284.9 0 0 7125.4 0 0 36607 0 0 7289.1 0 0 6573 0 0 5651.6 0 0 6801.4 0 0 8948 0 0 6746.7 0 0 9149.9 0 0 8386 0 0 7111.9 0 0 34639 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20266000 20266000 0 0 NaN 3093 1679 2 2 2750 2917 3127 3474 3127 3474 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24086 3127 3474 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24086 3127 3474 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24086 Q96G03 165 Q96G03 Q96G03 Phosphoglucomutase-2 PGM2 sp|Q96G03|PGM2_HUMAN Phosphoglucomutase-2 OS=Homo sapiens GN=PGM2 PE=1 SV=4 0.999967 44.7697 4.71405E-07 156.11 130.25 156.11 1 S TVSHLKLCAGIMITASHNPKQDNGYKVYWDN X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPXXXXXXXXXXX LCAGIMITAS(1)HNPK LCAGIMIT(-44.77)AS(44.77)HNPK 10 3 -0.59154 46882 0 0 30632 0 0 53147 0 0 33784 0 0 47461 0 0 49153 0 0 51720 0 0 43756 0 0 32124 0 0 34538 0 0 44386 0 0 28955 0 0 53095 0 0 34743 0 0 48541 0 0 48580 0 0 51906 0 0 45140 0 0 32527 0 0 33534 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 294650000 294650000 0 0 NaN 3094 1680 165 165 2304 2433;2434 2622;2623 2930;2931;2932;2933 2623 2931 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17133 2623 2931 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17133 2623 2931 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17133 Q96G46 277 Q96G46 Q96G46 tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like DUS3L sp|Q96G46|DUS3L_HUMAN tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like OS=Homo sapiens GN=DUS3L PE=1 SV=2 0.592408 1.73252 0.00185545 99.325 83.05 99.325 2 S AQQVPAGPGTSTPPSSPVRTCGPLTDEDVVR X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX QENCGAQQVPAGPGT(0.015)S(0.071)T(0.927)PPS(0.395)S(0.592)PVR QENCGAQQVPAGPGT(-20.61)S(-11.43)T(11.43)PPS(-1.73)S(1.73)PVR 21 3 0.15129 0 7912.3 0 0 6918.7 0 0 8793 0 0 5806.5 0 0 4616.3 0 0 7782.1 0 0 4478 0 0 6892.9 0 0 5918.2 0 0 3953.6 0 0 7490.4 0 0 6529.5 0 0 8752.1 0 0 6061.6 0 0 4930.7 0 0 7708.5 0 0 4604.3 0 0 7067.7 0 0 5778.4 0 0 3882.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 54844000 0 54844000 0 NaN 3095 1681 277 277 3016 3197 3420 3793 3420 3793 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10061 3420 3793 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10061 3420 3793 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10061 Q96G74 64 Q96G74 Q96G74 OTU domain-containing protein 5 OTUD5 sp|Q96G74|OTUD5_HUMAN OTU domain-containing protein 5 OS=Homo sapiens GN=OTUD5 PE=1 SV=1 1 133.843 9.25265E-06 133.84 115.25 133.84 1 S DRDRDSGVVGARPRASPPPQGPLPGPPGALH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP AS(1)PPPQGPLPGPPGALHR AS(133.84)PPPQGPLPGPPGALHR 2 3 1.4537 18820 0 0 21266 0 0 23407 0 0 18601 0 0 16582 0 0 20090 0 0 13627 0 0 22024 0 0 17566 0 0 7450 0 0 17826 0 0 20074 0 0 23217 0 0 19285 0 0 17192 0 0 20109 0 0 14121 0 0 22242 0 0 17165 0 0 7524.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 73167000 73167000 0 0 NaN 3096 1682 64 64 484 515 554 618 554 618 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13596 554 618 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13596 554 618 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13596 Q96G74 508 Q96G74 Q96G74 OTU domain-containing protein 5 OTUD5 sp|Q96G74|OTUD5_HUMAN OTU domain-containing protein 5 OS=Homo sapiens GN=OTUD5 PE=1 SV=1 0.909283 10.0121 6.99771E-05 123.14 88.84 123.14 1 S PGTSSQFSAGADRATSPLVSLYPALECRALI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX AT(0.091)S(0.909)PLVSLYPALECR AT(-10.01)S(10.01)PLVS(-43.33)LY(-90.33)PALECR 3 3 -0.99069 2134.2 0 0 2782.2 0 0 2444.4 0 0 3572.9 0 0 2697 0 0 2746.4 0 0 2984.6 0 0 2551.7 0 0 3245.9 0 0 5565.3 0 0 2020.7 0 0 2632.7 0 0 2447.2 0 0 3607 0 0 2726.4 0 0 2797.8 0 0 3031.4 0 0 2734.8 0 0 3191.7 0 0 5299.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 55591000 55591000 0 0 NaN 3097 1682 508 508 538 572 613 685 613 685 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22260 613 685 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22260 613 685 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22260 Q96GA3 17 Q96GA3 Q96GA3 Protein LTV1 homolog LTV1 sp|Q96GA3|LTV1_HUMAN Protein LTV1 homolog OS=Homo sapiens GN=LTV1 PE=1 SV=1 1 100.554 0.000647787 100.55 84.892 100.55 1 S PHRKKKPFIEKKKAVSFHLVHRSQRDPLAAD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX AVS(1)FHLVHR AVS(100.55)FHLVHR 3 3 -0.65683 10856 0 0 8206.6 0 0 11244 0 0 8540.3 0 0 5965.2 0 0 13018 0 0 6004.7 0 0 9282.3 0 0 7826.5 0 0 1136.2 0 0 10274 0 0 7754.3 0 0 11235 0 0 8820.5 0 0 6367.4 0 0 12804 0 0 6160.2 0 0 9489.8 0 0 7645.1 0 0 1284.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18163000 18163000 0 0 NaN 3098 1683 17 17 565 602 643 718 643 718 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14165 643 718 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14165 643 718 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14165 Q96GM8 358 Q96GM8 Q96GM8 Target of EGR1 protein 1 TOE1 sp|Q96GM8|TOE1_HUMAN Target of EGR1 protein 1 OS=Homo sapiens GN=TOE1 PE=1 SV=1 0.910324 10.1308 7.19882E-05 122.69 101.74 122.69 1 S EKRKRALLNLPGTQTSGEAKDGPPKKQVCGD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPXXXXXXXXXXX ALLNLPGT(0.001)QT(0.088)S(0.91)GEAK ALLNLPGT(-28.31)QT(-10.13)S(10.13)GEAK 11 3 -2.6849 4033.1 0 0 8160.7 0 0 5645.5 0 0 9316.8 0 0 6589 0 0 4719.4 0 0 7352.7 0 0 6780.7 0 0 9431.7 0 0 5918.3 0 0 3822.4 0 0 7715.7 0 0 5605 0 0 9421.8 0 0 6643.6 0 0 4972.7 0 0 7504.7 0 0 6900 0 0 9218.1 0 0 5729.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20386000 20386000 0 0 NaN 3099 1684 358 358 298 319 340 380 340 380 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19884 340 380 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19884 340 380 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19884 Q96GV9 167 Q96GV9 Q96GV9 UNC119-binding protein C5orf30 C5orf30 sp|Q96GV9|CE030_HUMAN UNC119-binding protein C5orf30 OS=Homo sapiens GN=C5orf30 PE=1 SV=1 0.991738 20.7933 0.0337881 57.175 23.912 57.175 1 S PLPLCLLKGKRAHSKSLDYLNLDKMIKEPAD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(0.992)LDY(0.008)LNLDK S(20.79)LDY(-20.79)LNLDK 1 2 -0.088717 8159.3 0 0 13475 0 0 9865 0 0 14577 0 0 13309 0 0 10165 0 0 12330 0 0 13855 0 0 16305 0 0 23615 0 0 7727.2 0 0 12735 0 0 9875.7 0 0 14829 0 0 13292 0 0 10477 0 0 12707 0 0 14466 0 0 15920 0 0 22557 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8553600 8553600 0 0 NaN 3100 1685 167 167 3927 4186 4468 4967 4468 4967 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20388 4468 4967 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20388 4468 4967 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20388 Q96GX2 92 Q96GX2 Q96GX2 Putative ataxin-7-like protein 3B ATXN7L3B sp|Q96GX2|A7L3B_HUMAN Putative ataxin-7-like protein 3B OS=Homo sapiens GN=ATXN7L3B PE=3 SV=2 1 188.157 5.369E-18 236.28 214.16 236.28 1 S LPGEPGNGPDQQLQRSPPEFQ__________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX LPLCSLPGEPGNGPDQQLQRS(1)PPEFQ LPLCS(-188.16)LPGEPGNGPDQQLQRS(188.16)PPEFQ 21 3 -0.55603 2462.3 0 0 3088.2 0 0 2314.4 0 0 3441.2 0 0 2790.4 0 0 2144.6 0 0 2732.5 0 0 3410.7 0 0 3427.3 0 0 27299 0 0 2329.4 0 0 2919.3 0 0 2344.7 0 0 3491 0 0 2803.5 0 0 2274.8 0 0 2803.3 0 0 4194.7 0 0 3352.2 0 0 25784 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9274200 9274200 0 0 NaN 3101 1686 92 92 2498 2637 2831 3159 2831 3159 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21903 2831 3159 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21903 2831 3159 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21903 Q96GX9 87 Q96GX9 Q96GX9 Methylthioribulose-1-phosphate dehydratase APIP sp|Q96GX9|MTNB_HUMAN Methylthioribulose-1-phosphate dehydratase OS=Homo sapiens GN=APIP PE=1 SV=1 0.997015 28.2019 2.57516E-06 158.3 102.26 158.3 1 S DMFVCDINEKDISGPSPSKKLKKSQCTPLFM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX DIS(0.001)GPS(0.997)PS(0.002)K DIS(-28.29)GPS(28.2)PS(-28.2)K 6 2 -0.16361 52486 0 0 275990 0 0 54134 0 0 258800 0 0 112360 0 0 54230 0 0 108280 0 0 145160 0 0 302200 0 0 17313 0 0 49671 0 0 260620 0 0 55120 0 0 263490 0 0 110710 0 0 64661 0 0 115720 0 0 142610 0 0 289950 0 0 19662 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 226740000 226740000 0 0 NaN 3102 1687 87 87 707;708 751;752 801;802 885;886;887 801 885 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10509 801 885 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10509 802 887 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10516 Q96HA1 81 Q96HA1 Q96HA1 Nuclear envelope pore membrane protein POM 121 POM121 sp|Q96HA1|P121A_HUMAN Nuclear envelope pore membrane protein POM 121 OS=Homo sapiens GN=POM121 PE=1 SV=2 0.684421 3.36223 0.0099398 69.258 51.199 69.258 1 S WWGLSREPRGSRPLSSFVRKARHRRPLSSFV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX GSRPLS(0.316)S(0.684)FVR GS(-50.53)RPLS(-3.36)S(3.36)FVR 7 3 0.23235 8211.6 0 0 9453.4 0 0 8827.5 0 0 8670.3 0 0 6101 0 0 7601.9 0 0 7587.3 0 0 7881.5 0 0 9089.9 0 0 1767.2 0 0 7772.6 0 0 8925.9 0 0 8822.8 0 0 8933 0 0 6374.7 0 0 7674.2 0 0 7693 0 0 7948.1 0 0 8905.3 0 0 1846.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7256700 7256700 0 0 NaN 3103 1688 81 81 1633 1720 1859 2072 1859 2072 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13381 1859 2072 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13381 1859 2072 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13381 Q96HA1 393 Q96HA1 Q96HA1 Nuclear envelope pore membrane protein POM 121 POM121 sp|Q96HA1|P121A_HUMAN Nuclear envelope pore membrane protein POM 121 OS=Homo sapiens GN=POM121 PE=1 SV=2 0.997945 29.9814 5.98167E-54 389.89 352.41 389.89 1 S SQSSDDHLNKRSRSSSMSSLTGAYASGIPSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP SS(0.001)S(0.998)MS(0.001)SLTGAYASGIPSSSR S(-42.97)S(-29.98)S(29.98)MS(-29.98)S(-61.74)LT(-116.11)GAY(-247.78)AS(-200.45)GIPS(-263.93)S(-268.9)S(-273.85)R 3 2 0.51408 5056.9 0 0 6050.2 0 0 5018.3 0 0 5477.2 0 0 5033.7 0 0 5154 0 0 4731.1 0 0 6787.3 0 0 5158.6 0 0 21905 0 0 4785 0 0 5712.1 0 0 5055 0 0 5653.6 0 0 5103.4 0 0 5242.2 0 0 4842.1 0 0 7404.9 0 0 5071.9 0 0 20783 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8264100 8264100 0 0 NaN 3104 1688 393 393 4435 4726 5030 5579 5030 5579 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16594 5030 5579 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16594 5030 5579 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16594 Q96HA7 905 Q96HA7 Q96HA7 Tonsoku-like protein TONSL sp|Q96HA7|TONSL_HUMAN Tonsoku-like protein OS=Homo sapiens GN=TONSL PE=1 SV=2 0.731048 5.44302 1.02325E-07 154.32 135.44 154.32 1 S PVNAGPSSLASEPPGSPSTPRVSEPSGDSSA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX LTCMQSCSAPVNAGPSSLASEPPGS(0.731)PS(0.209)T(0.06)PR LT(-131.79)CMQS(-125.85)CS(-119.07)APVNAGPS(-56.21)S(-63.06)LAS(-48.97)EPPGS(5.44)PS(-5.44)T(-10.84)PR 25 3 -0.11174 2174.7 0 0 1973.4 0 0 1980.5 0 0 1710.3 0 0 2233 0 0 2651.2 0 0 2022.3 0 0 2052.1 0 0 2069.2 0 0 16372 0 0 2057.1 0 0 1862.7 0 0 2008.1 0 0 1787.2 0 0 2248.2 0 0 2638.8 0 0 2069.9 0 0 2574.9 0 0 2039.7 0 0 15463 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20592000 20592000 0 0 NaN 3105 1689 905 905 2613 2760 2960 3297 2960 3297 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16546 2960 3297 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16546 2960 3297 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16546 Q96I24 569 Q96I24 Q96I24 Far upstream element-binding protein 3 FUBP3 sp|Q96I24|FUBP3_HUMAN Far upstream element-binding protein 3 OS=Homo sapiens GN=FUBP3 PE=1 SV=2 1 105.855 4.36546E-11 179.43 166.95 179.43 1 S QVAFYGQTLGQAQAHSQEQ____________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX QQVAFYGQTLGQAQAHS(1)QEQ QQVAFY(-148.66)GQT(-105.85)LGQAQAHS(105.85)QEQ 17 3 2.0501 7462.3 0 0 8501.2 0 0 7596.1 0 0 7780.8 0 0 8371.5 0 0 7839.3 0 0 10607 0 0 11390 0 0 8308.1 0 0 21736 0 0 7061.7 0 0 8026.7 0 0 7654.9 0 0 8034 0 0 8479.1 0 0 7940.6 0 0 10627 0 0 11942 0 0 8295.1 0 0 20730 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24266000 24266000 0 0 NaN 3106 1690 569 569 3122 3312 3542 3926 3542 3926 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15768 3542 3926 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15768 3542 3926 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15768 Q96I25 222 Q96I25 Q96I25 Splicing factor 45 RBM17 sp|Q96I25|SPF45_HUMAN Splicing factor 45 OS=Homo sapiens GN=RBM17 PE=1 SV=1 0.999119 30.5448 7.70716E-32 313.03 293.31 217.7 1 S AAIPPPVYEEQDRPRSPTGPSNSFLANMGGT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP S(0.999)PT(0.001)GPSNSFLANMGGTVAHK S(30.54)PT(-30.54)GPS(-78.75)NS(-98.8)FLANMGGT(-191.36)VAHK 1 3 0.42235 55862 0 0 79416 0 0 61966 0 0 77939 0 0 54105 0 0 73173 0 0 73365 0 0 84157 0 0 93511 0 0 49647 0 0 52882 0 0 75013 0 0 61985 0 0 80039 0 0 55661 0 0 73789 0 0 74306 0 0 85486 0 0 91413 0 0 48697 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 300140000 300140000 0 0 NaN 3107 1691 222 222 38;4202 40;41;4478;4479 44;45;4772;4773 54;55;5297;5298 4772 5297 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14207 4773 5298 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18725 4773 5298 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18725 Q96I25 169 Q96I25 Q96I25 Splicing factor 45 RBM17 sp|Q96I25|SPF45_HUMAN Splicing factor 45 OS=Homo sapiens GN=RBM17 PE=1 SV=1 0.999872 39.9707 0.0128469 66.335 46.239 66.335 1 S DSDEDEDYERERRKRSMGGAAIAPPTSLVEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(1)MGGAAIAPPTSLVEK S(39.97)MGGAAIAPPT(-39.97)S(-45.6)LVEK 1 3 -0.10958 17688 0 0 18484 0 0 18693 0 0 17543 0 0 29031 0 0 19203 0 0 27906 0 0 22727 0 0 18234 0 0 16434 0 0 16741 0 0 17456 0 0 18890 0 0 18097 0 0 28825 0 0 19249 0 0 28195 0 0 23156 0 0 18401 0 0 16000 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 33871000 33871000 0 0 NaN 3108 1691 169 169 4028 4294;4295 4582;4583 5090;5091 4583 5091 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19705 4583 5091 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19705 4583 5091 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19705 Q96IY1 4 Q96IY1 Q96IY1 Kinetochore-associated protein NSL1 homolog NSL1 sp|Q96IY1|NSL1_HUMAN Kinetochore-associated protein NSL1 homolog OS=Homo sapiens GN=NSL1 PE=1 SV=3 1 113.629 5.67167E-08 113.63 57.404 113.63 1 S ____________MAGSPELVVLDPPWDKELA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX AGS(1)PELVVLDPPWDK AGS(113.63)PELVVLDPPWDK 3 2 0.4248 8918.2 0 0 11771 0 0 10941 0 0 10822 0 0 3260.2 0 0 9580.6 0 0 3747.7 0 0 7644.6 0 0 10872 0 0 53615 0 0 8446.5 0 0 11115 0 0 10807 0 0 11150 0 0 3775.6 0 0 9735.3 0 0 3986.5 0 0 9358.6 0 0 10425 0 0 50662 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 39077000 39077000 0 0 NaN 3109 1692 4 4 226 240 258 289 258 289 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24191 258 289 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24191 258 289 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24191 Q96IZ6 4 Q96IZ6 Q96IZ6 Methyltransferase-like protein 2A METTL2A sp|Q96IZ6|MET2A_HUMAN Methyltransferase-like protein 2A OS=Homo sapiens GN=METTL2A PE=1 SV=5 0.873657 8.3979 0.0162013 51.695 38.9 51.695 1 S ____________MAGSYPEGAPAVLADKRQQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX AGS(0.874)Y(0.126)PEGAPAVLADKR AGS(8.4)Y(-8.4)PEGAPAVLADKR 3 3 0.64599 5878.6 0 0 5003.7 0 0 6676.6 0 0 6431.3 0 0 8532.6 0 0 5798.1 0 0 7058.1 0 0 6630.1 0 0 4806.5 0 0 7760.6 0 0 5565.7 0 0 4734.9 0 0 6697.1 0 0 6506.1 0 0 8526.4 0 0 5865.1 0 0 7193.7 0 0 6852.1 0 0 4838 0 0 7461 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7547800 7547800 0 0 NaN 3110 1693 4 4 231 245 263 294 263 294 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16410 263 294 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16410 263 294 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16410 Q96IZ7 331 Q96IZ7 Q96IZ7 Serine/Arginine-related protein 53 RSRC1 sp|Q96IZ7|RSRC1_HUMAN Serine/Arginine-related protein 53 OS=Homo sapiens GN=RSRC1 PE=1 SV=1 1 54.1572 0.0440702 54.157 52.716 54.157 1 S WFKRLIALRQERLMGSPVA____________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX LMGS(1)PVA LMGS(54.16)PVA 4 2 -0.97923 3827.9 0 0 3339.7 0 0 4092.3 0 0 4411.1 0 0 3154.3 0 0 4212.4 0 0 3398.2 0 0 3982.7 0 0 4607.8 0 0 1386.9 0 0 3623.1 0 0 3161 0 0 4094.5 0 0 4460.6 0 0 3261 0 0 4230.9 0 0 3480.5 0 0 4045.7 0 0 4495.2 0 0 1398.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11829000 11829000 0 0 NaN 3111 1694 331 331 2468 2606 2800 3127 2800 3127 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17034 2800 3127 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17034 2800 3127 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17034 Q96IZ7 61 Q96IZ7 Q96IZ7 Serine/Arginine-related protein 53 RSRC1 sp|Q96IZ7|RSRC1_HUMAN Serine/Arginine-related protein 53 OS=Homo sapiens GN=RSRC1 PE=1 SV=1 0.998914 31.0003 0.0351918 50.834 31.563 50.834 1 S SKSRSWSRDLQPRSHSYDRRRRHRSSSSSSY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX S(0.001)HS(0.999)YDRR S(-31)HS(31)Y(-35.34)DRR 3 3 0.36593 2855 0 0 2128.1 0 0 2280.5 0 0 1980 0 0 1869.4 0 0 3199.7 0 0 1640.2 0 0 1880.8 0 0 2396.3 0 0 9934.5 0 0 2699.4 0 0 2009.5 0 0 2323.9 0 0 2061.6 0 0 1918.8 0 0 3155 0 0 1701.3 0 0 2237 0 0 2332.4 0 0 9398.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 2000800 2000800 0 0 NaN 3112 1694 61 61 3840 4093 4368 4857 4368 4857 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4411 4368 4857 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4411 4368 4857 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4411 Q96J92 1217 Q96J92 Q96J92 Serine/threonine-protein kinase WNK4 WNK4 sp|Q96J92|WNK4_HUMAN Serine/threonine-protein kinase WNK4 OS=Homo sapiens GN=WNK4 PE=1 SV=1 0.999578 33.9677 0.0123 72.421 59.543 72.421 1 S LQRSEPPGPGIMRRNSLSGSSTGSQEQRASK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX RNS(1)LSGSSTGSQEQR RNS(33.97)LS(-33.97)GS(-48.12)S(-54.13)T(-59.57)GS(-64.11)QEQR 3 3 -0.63982 1106.3 0 0 2038.3 0 0 500.04 0 0 1784.4 0 0 1055 0 0 1069.2 0 0 1820.4 0 0 942.8 0 0 1686.3 0 0 1318.7 0 0 1044.6 0 0 1924.1 0 0 546.6 0 0 1836.1 0 0 1048.6 0 0 1104.5 0 0 1812.6 0 0 990.33 0 0 1669.5 0 0 1263.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 2443200 2443200 0 0 NaN 3113 1695 1217 1217 3364 3568 3807 4226 3807 4226 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5362 3807 4226 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5362 3807 4226 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5362 Q96JB2 533 Q96JB2 Q96JB2 Conserved oligomeric Golgi complex subunit 3 COG3 sp|Q96JB2|COG3_HUMAN Conserved oligomeric Golgi complex subunit 3 OS=Homo sapiens GN=COG3 PE=1 SV=3 0.727652 5.2372 9.5244E-08 162.19 138.8 53.798 1 S VHLEEGESNSLTKSGSTESLNPRPQTTISPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.218)GS(0.728)T(0.049)ES(0.006)LNPR S(-5.24)GS(5.24)T(-11.73)ES(-21.12)LNPR 3 2 -1.248 19253 0 0 14400 0 0 19392 0 0 15760 0 0 14539 0 0 20456 0 0 13948 0 0 18193 0 0 16023 0 0 17061 0 0 18218 0 0 13610 0 0 19458 0 0 16175 0 0 15035 0 0 20299 0 0 14283 0 0 18850 0 0 15722 0 0 16486 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 27309000 27309000 0 0 NaN 3114 1696 533 533 3820;3821 4072;4073 4345;4346 4827;4828 4345 4827 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7648 4346 4828 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19782 4346 4828 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19782 Q96JB3 197 Q96JB3 Q96JB3 Hypermethylated in cancer 2 protein HIC2 sp|Q96JB3|HIC2_HUMAN Hypermethylated in cancer 2 protein OS=Homo sapiens GN=HIC2 PE=1 SV=2 1 107.794 1.5294E-11 193.77 160.12 193.77 1 S RKGAHAPQELPQAKGSDDELFLGGSNQDSVQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP GS(1)DDELFLGGSNQDSVQGLGR GS(107.79)DDELFLGGS(-107.79)NQDS(-142.28)VQGLGR 2 3 -1.7888 13336 0 0 11985 0 0 13365 0 0 12169 0 0 11388 0 0 12227 0 0 12004 0 0 12936 0 0 11685 0 0 43962 0 0 12619 0 0 11323 0 0 13433 0 0 12484 0 0 11681 0 0 12345 0 0 12181 0 0 14273 0 0 11543 0 0 41695 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 20447000 20447000 0 0 NaN 3115 1697 197 197 1596 1682 1818 2020;2021 1818 2020 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19325 1818 2020 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19325 1818 2020 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19325 Q96JB3 348 Q96JB3 Q96JB3 Hypermethylated in cancer 2 protein HIC2 sp|Q96JB3|HIC2_HUMAN Hypermethylated in cancer 2 protein OS=Homo sapiens GN=HIC2 PE=1 SV=2 1 81.8538 0.00731139 81.854 52.121 81.854 1 S STRKKEWGKKEPVAGSPFERREAGPKGPCPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX KEPVAGS(1)PFER KEPVAGS(81.85)PFER 7 3 -0.14115 9272.2 0 0 43723 0 0 8077.6 0 0 44440 0 0 9181.8 0 0 9787 0 0 10153 0 0 23143 0 0 48028 0 0 2885.2 0 0 8769.4 0 0 41308 0 0 8217.8 0 0 45029 0 0 9302 0 0 11530 0 0 11325 0 0 22783 0 0 45783 0 0 3252.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 41033000 41033000 0 0 NaN 3116 1697 348 348 2043 2162 2329 2596 2329 2596 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11865 2329 2596 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11865 2329 2596 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11865 Q96JH7 768 Q96JH7 Q96JH7 Deubiquitinating protein VCIP135 VCPIP1 sp|Q96JH7|VCIP1_HUMAN Deubiquitinating protein VCIP135 OS=Homo sapiens GN=VCPIP1 PE=1 SV=2 0.912456 10.5653 0.000298965 122.69 75.43 122.69 1 S DGPSSAPATPTKAPYSPTTSKEKKIRITTND X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX APYS(0.912)PT(0.08)T(0.007)S(0.001)K APY(-56.42)S(10.57)PT(-10.57)T(-21.3)S(-31.38)K 4 2 -0.53978 51390 0 0 57050 0 0 55324 0 0 49283 0 0 45671 0 0 57007 0 0 49841 0 0 53845 0 0 55326 0 0 14917 0 0 48643 0 0 53849 0 0 55372 0 0 51200 0 0 46981 0 0 56785 0 0 50684 0 0 54582 0 0 54357 0 0 15292 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 47451000 47451000 0 0 NaN 3117 1698 768 768 389 416 451 500 451 500 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10817 451 500 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10817 451 500 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10817 Q96JH7 747 Q96JH7 Q96JH7 Deubiquitinating protein VCIP135 VCPIP1 sp|Q96JH7|VCIP1_HUMAN Deubiquitinating protein VCIP135 OS=Homo sapiens GN=VCPIP1 PE=1 SV=2 0.680999 3.7157 0.0208721 66.273 16.855 66.273 1 S TEKLKQEQKGQPRTVSPSTIRDGPSSAPATP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX T(0.026)VS(0.681)PS(0.289)T(0.003)IR T(-14.15)VS(3.72)PS(-3.72)T(-23.09)IR 3 2 0.36965 55064 0 0 42225 0 0 54695 0 0 43914 0 0 39550 0 0 58528 0 0 48840 0 0 47155 0 0 46381 0 0 6591.1 0 0 52103 0 0 39898 0 0 54928 0 0 45221 0 0 41159 0 0 57883 0 0 49202 0 0 47940 0 0 45868 0 0 7297.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 43421000 43421000 0 0 NaN 3118 1698 747 747 5018 5350 5702 6333 5702 6333 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10197 5702 6333 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10197 5702 6333 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10197 Q96JM3 416 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 CHAMP1 sp|Q96JM3|CHAP1_HUMAN Chromosome alignment-maintaining phosphoprotein 1 OS=Homo sapiens GN=CHAMP1 PE=1 SV=2 1 140.78 3.79791E-06 140.78 96.792 140.78 1 S APTLSPEHWKAVPPVSPELRKPGPPLSPEIR X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX AVPPVS(1)PELR AVPPVS(140.78)PELR 6 2 -0.0045158 59433 0 0 46585 0 0 62082 0 0 52785 0 0 38753 0 0 58996 0 0 44256 0 0 52426 0 0 50535 0 0 18430 0 0 56248 0 0 44043 0 0 62085 0 0 53919 0 0 40788 0 0 58810 0 0 44957 0 0 53397 0 0 49596 0 0 18568 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 90947000 90947000 0 0 NaN 3119 1699 416 416 561 598 639 713;714 639 713 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14583 639 713 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14583 639 713 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14583 Q96JM3 603 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 CHAMP1 sp|Q96JM3|CHAP1_HUMAN Chromosome alignment-maintaining phosphoprotein 1 OS=Homo sapiens GN=CHAMP1 PE=1 SV=2 1 138.974 8.77098E-07 138.97 120.52 138.97 1 S DDQKCDILVQEELLASPKKLLEDTLFPSSKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPXXXXXXXXXXXXX CDILVQEELLAS(1)PK CDILVQEELLAS(138.97)PK 12 3 0.19631 6729 0 0 5074.6 0 0 6104.7 0 0 5285 0 0 6199.2 0 0 6450.7 0 0 4555.2 0 0 5082.3 0 0 5639.4 0 0 14383 0 0 6365 0 0 4795 0 0 6181 0 0 5432.4 0 0 6263.2 0 0 6423.8 0 0 4745.5 0 0 5584.3 0 0 5518.4 0 0 13661 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22709000 22709000 0 0 NaN 3120 1699 603 603 599 638 680 755 680 755 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21490 680 755 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21490 680 755 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21490 Q96JM3 108 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 CHAMP1 sp|Q96JM3|CHAP1_HUMAN Chromosome alignment-maintaining phosphoprotein 1 OS=Homo sapiens GN=CHAMP1 PE=1 SV=2 0.9737 15.6847 0.000201317 102.43 68.156 102.43 1 S DKPKNQLNKETDPVKSPPLPEHQKIPCNSAE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPXXXXXXX ET(0.026)DPVKS(0.974)PPLPEHQK ET(-15.68)DPVKS(15.68)PPLPEHQK 7 4 0.057283 12898 0 0 8768.6 0 0 10605 0 0 10754 0 0 8519.3 0 0 12673 0 0 8661 0 0 9992.2 0 0 10406 0 0 2368.9 0 0 12196 0 0 8294.7 0 0 10785 0 0 10952 0 0 8772.2 0 0 12588 0 0 8857.2 0 0 10198 0 0 10194 0 0 2461.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13339000 13339000 0 0 NaN 3121 1699 108 108 1178 1239 1337 1481 1337 1481 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12281 1337 1481 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12281 1337 1481 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12281 Q96JM3 476 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 CHAMP1 sp|Q96JM3|CHAP1_HUMAN Chromosome alignment-maintaining phosphoprotein 1 OS=Homo sapiens GN=CHAMP1 PE=1 SV=2 1 128.811 0.000442195 128.81 93.366 128.81 1 S ASLDFPESQKSSRGGSPDLWKSSFFIEPQKP X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX GGS(1)PDLWK GGS(128.81)PDLWK 3 2 0.40175 417360 0 0 231770 0 0 408310 0 0 254100 0 0 331390 0 0 405830 0 0 331010 0 0 347680 0 0 242290 0 0 11300 0 0 394900 0 0 219080 0 0 410730 0 0 261980 0 0 340750 0 0 399300 0 0 334530 0 0 351340 0 0 242830 0 0 18687 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 504290000 504290000 0 0 NaN 3122 1699 476 476 1452 1529 1651 1830 1651 1830 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16624 1651 1830 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16624 1651 1830 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16624 Q96JM3 653 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 CHAMP1 sp|Q96JM3|CHAP1_HUMAN Chromosome alignment-maintaining phosphoprotein 1 OS=Homo sapiens GN=CHAMP1 PE=1 SV=2 0.787012 6.25604 1.16491E-08 173.36 158.27 173.36 1 S KTDLDAMDIKGQESSSDQEQVDVESIDFSKE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPX GQES(0.027)S(0.186)S(0.787)DQEQVDVESIDFSK GQES(-14.71)S(-6.26)S(6.26)DQEQVDVES(-129.76)IDFS(-152.31)K 6 3 -0.21438 6763.1 0 0 5373.4 0 0 6231.2 0 0 4967.2 0 0 7129.9 0 0 5503.5 0 0 6645.7 0 0 8152.2 0 0 5026.9 0 0 53511 0 0 6397.6 0 0 5073.8 0 0 6315.1 0 0 5133.6 0 0 7174 0 0 5626.5 0 0 6743.7 0 0 9687 0 0 5028.7 0 0 50576 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24709000 24709000 0 0 NaN 3123 1699 653 653 1575 1659 1793 1991 1793 1991 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18059 1793 1991 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18059 1793 1991 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18059 Q96JM3 427 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 CHAMP1 sp|Q96JM3|CHAP1_HUMAN Chromosome alignment-maintaining phosphoprotein 1 OS=Homo sapiens GN=CHAMP1 PE=1 SV=2 1 98.2806 0.00132324 98.281 55.438 98.281 1 S VPPVSPELRKPGPPLSPEIRSPAGSPELRKP X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX KPGPPLS(1)PEIR KPGPPLS(98.28)PEIR 7 3 -0.24914 15817 0 0 10964 0 0 16696 0 0 13648 0 0 16283 0 0 15348 0 0 14253 0 0 14301 0 0 12422 0 0 2919.9 0 0 14970 0 0 10373 0 0 16752 0 0 13877 0 0 16518 0 0 15301 0 0 14556 0 0 14473 0 0 12334 0 0 3080.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 100220000 100220000 0 0 NaN 3124 1699 427 427 2153 2275 2449 2727 2449 2727 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13723 2449 2727 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13723 2449 2727 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13723 Q96JM3 507 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 CHAMP1 sp|Q96JM3|CHAP1_HUMAN Chromosome alignment-maintaining phosphoprotein 1 OS=Homo sapiens GN=CHAMP1 PE=1 SV=2 0.879791 9.00896 7.49051E-05 122.87 88.597 122.87 1 S VFPETRKPGPSGPSESPKAASDIWKPVLSID X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX KPGPS(0.01)GPS(0.111)ES(0.88)PK KPGPS(-19.59)GPS(-9.01)ES(9.01)PK 10 3 0.16915 57653 0 0 42328 0 0 52042 0 0 44118 0 0 38149 0 0 58822 0 0 40585 0 0 49397 0 0 54108 0 0 3087.1 0 0 54533 0 0 39996 0 0 52561 0 0 45426 0 0 39581 0 0 58192 0 0 41565 0 0 50007 0 0 52815 0 0 4050.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 78535000 78535000 0 0 NaN 3125 1699 507 507 2154 2276 2450 2728 2450 2728 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8767 2450 2728 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8767 2450 2728 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8767 Q96JM3 445 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 CHAMP1 sp|Q96JM3|CHAP1_HUMAN Chromosome alignment-maintaining phosphoprotein 1 OS=Homo sapiens GN=CHAMP1 PE=1 SV=2 0.987274 18.8973 0.00196267 96.673 60.38 96.673 1 S IRSPAGSPELRKPSGSPDLWKLSPDQRKTSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX KPS(0.013)GS(0.987)PDLWK KPS(-18.9)GS(18.9)PDLWK 5 3 -0.41003 14529 0 0 15418 0 0 18081 0 0 17519 0 0 24080 0 0 16220 0 0 28286 0 0 19016 0 0 18799 0 0 3864.3 0 0 13761 0 0 14577 0 0 18084 0 0 17839 0 0 24133 0 0 16358 0 0 28331 0 0 19083 0 0 18951 0 0 4078.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 55423000 55423000 0 0 NaN 3126 1699 445 445 2165 2287 2461 2741 2461 2741 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15719 2461 2741 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15719 2461 2741 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15719 Q96JM3 405 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 CHAMP1 sp|Q96JM3|CHAP1_HUMAN Chromosome alignment-maintaining phosphoprotein 1 OS=Homo sapiens GN=CHAMP1 PE=1 SV=2 0.993195 21.6419 3.87467E-05 130.61 113.84 130.61 1 S WKSGPPELRKTAPTLSPEHWKAVPPVSPELR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX TAPT(0.007)LS(0.993)PEHWK T(-69.19)APT(-21.64)LS(21.64)PEHWK 6 3 0.37674 38172 0 0 30683 0 0 39540 0 0 33127 0 0 30432 0 0 38615 0 0 29215 0 0 35375 0 0 39305 0 0 8037.3 0 0 36126 0 0 28999 0 0 39622 0 0 33953 0 0 31412 0 0 38436 0 0 30073 0 0 35851 0 0 38354 0 0 8386.8 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 161470000 161470000 0 0 NaN 3127 1699 405 405 2243;4619 2371;4927 2552;5248 2849;5829 5248 5829 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16133 5248 5829 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16133 5248 5829 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16133 Q96JM3 459 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 CHAMP1 sp|Q96JM3|CHAP1_HUMAN Chromosome alignment-maintaining phosphoprotein 1 OS=Homo sapiens GN=CHAMP1 PE=1 SV=2 0.498912 0 0.0369433 71.742 44.093 71.742 S GSPDLWKLSPDQRKTSPASLDFPESQKSSRG X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KT(0.499)S(0.499)PAS(0.002)LDFPESQK KT(0)S(0)PAS(-23.63)LDFPES(-45.51)QK 3 3 0.1894 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3128 1699 459 459 2252;4927 2380;5252 2562 2860 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15416 2562 2860 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15416 2562 2860 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15416 Q96JM3 468 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 CHAMP1 sp|Q96JM3|CHAP1_HUMAN Chromosome alignment-maintaining phosphoprotein 1 OS=Homo sapiens GN=CHAMP1 PE=1 SV=2 0.637685 5.46551 0.000374573 100.67 69.702 100.67 1 S PDQRKTSPASLDFPESQKSSRGGSPDLWKSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPXXXXXXXXXX TSPASLDFPES(0.638)QKS(0.181)S(0.181)R T(-95.24)S(-92.96)PAS(-62.22)LDFPES(5.47)QKS(-5.47)S(-5.47)R 11 3 0.45972 11317 0 0 12398 0 0 13644 0 0 13424 0 0 12557 0 0 11407 0 0 11832 0 0 13240 0 0 12893 0 0 24613 0 0 10717 0 0 11718 0 0 13590 0 0 13689 0 0 12798 0 0 11593 0 0 12108 0 0 13951 0 0 12676 0 0 23483 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12205000 12205000 0 0 NaN 3129 1699 468 468 2252;4927 2380;5252 5595 6218 5595 6218 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14700 5595 6218 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14700 5595 6218 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14700 Q96JM3 204 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 CHAMP1 sp|Q96JM3|CHAP1_HUMAN Chromosome alignment-maintaining phosphoprotein 1 OS=Homo sapiens GN=CHAMP1 PE=1 SV=2 1 135.566 6.86632E-09 174.1 149.83 174.1 2 S KSVPVCESQKLAPVPSPEPQKPAPVSPESVK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP LAPVPS(1)PEPQKPAPVS(0.997)PES(0.003)VK LAPVPS(135.57)PEPQKPAPVS(25.77)PES(-25.77)VK 6 4 0.10357 0 8193.3 0 0 6680.6 0 0 7964.1 0 0 7144.7 0 0 7474.4 0 0 9231.1 0 0 7062.8 0 0 7149.2 0 0 7709.9 0 0 9775.5 0 0 7752.1 0 0 6313.5 0 0 8025.8 0 0 7341.1 0 0 7608.7 0 0 9151.9 0 0 7226.9 0 0 7546.4 0 0 7579.9 0 0 9370.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 37071000 0 37071000 0 NaN 3130 1699 204 204 2290 2419 2603 2908 2603 2908 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17720 2603 2908 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17720 2603 2908 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17720 Q96JM3 214 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 CHAMP1 sp|Q96JM3|CHAP1_HUMAN Chromosome alignment-maintaining phosphoprotein 1 OS=Homo sapiens GN=CHAMP1 PE=1 SV=2 0.997357 25.7677 6.86632E-09 174.1 149.83 174.1 2 S LAPVPSPEPQKPAPVSPESVKATLSNPKPQK X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX LAPVPS(1)PEPQKPAPVS(0.997)PES(0.003)VK LAPVPS(135.57)PEPQKPAPVS(25.77)PES(-25.77)VK 16 4 0.10357 0 8193.3 0 0 6680.6 0 0 7964.1 0 0 7144.7 0 0 7474.4 0 0 9231.1 0 0 7062.8 0 0 7149.2 0 0 7709.9 0 0 9775.5 0 0 7752.1 0 0 6313.5 0 0 8025.8 0 0 7341.1 0 0 7608.7 0 0 9151.9 0 0 7226.9 0 0 7546.4 0 0 7579.9 0 0 9370.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 37071000 0 37071000 0 NaN 3131 1699 214 214 2290 2419 2603 2908 2603 2908 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17720 2603 2908 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17720 2603 2908 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17720 Q96JM3 386 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 CHAMP1 sp|Q96JM3|CHAP1_HUMAN Chromosome alignment-maintaining phosphoprotein 1 OS=Homo sapiens GN=CHAMP1 PE=1 SV=2 0.999735 38.1691 0.000298453 114.02 81.798 114.02 1 S KSSSVSPSSWKSPPASPESWKSGPPELRKTA X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX SPPAS(1)PESWK S(-39.49)PPAS(38.17)PES(-38.17)WK 5 2 -0.78495 17239 0 0 14536 0 0 16507 0 0 14745 0 0 16971 0 0 18087 0 0 16111 0 0 18005 0 0 14848 0 0 13486 0 0 16310 0 0 13733 0 0 16668 0 0 15181 0 0 17182 0 0 18004 0 0 16407 0 0 18470 0 0 14704 0 0 13116 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27375000 27375000 0 0 NaN 3132 1699 386 386 4135 4408 4699 5215 4699 5215 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14833 4699 5215 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14833 4699 5215 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14833 Q96JM3 376 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 CHAMP1 sp|Q96JM3|CHAP1_HUMAN Chromosome alignment-maintaining phosphoprotein 1 OS=Homo sapiens GN=CHAMP1 PE=1 SV=2 0.996049 24.924 1.51997E-06 161.93 131.52 161.93 1 S PTPSVSSASWKSSSVSPSSWKSPPASPESWK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX SSSVS(0.996)PS(0.003)SWK S(-50.43)S(-46.78)S(-33.79)VS(24.92)PS(-24.92)S(-35.22)WK 5 2 0.52583 19854 0 0 17319 0 0 22625 0 0 18676 0 0 15103 0 0 20919 0 0 14729 0 0 19846 0 0 19698 0 0 38676 0 0 18798 0 0 16369 0 0 22530 0 0 19129 0 0 15770 0 0 20927 0 0 15147 0 0 21114 0 0 19226 0 0 36877 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27116000 27116000 0 0 NaN 3133 1699 376 376 4476 4767 5074 5630 5074 5630 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14918 5074 5630 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14918 5074 5630 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14918 Q96JM3 542 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 CHAMP1 sp|Q96JM3|CHAP1_HUMAN Chromosome alignment-maintaining phosphoprotein 1 OS=Homo sapiens GN=CHAMP1 PE=1 SV=2 0.999992 50.9241 0.00016192 125.46 43.449 125.46 1 S KPALFPEPAKTAPPASPEARKRALFPEPRKH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX TAPPAS(1)PEAR T(-50.92)APPAS(50.92)PEAR 6 2 0.58738 15381 0 0 9594.3 0 0 14996 0 0 9971.1 0 0 10608 0 0 15384 0 0 11157 0 0 9624.4 0 0 10699 0 0 3940.2 0 0 14553 0 0 9065.5 0 0 15070 0 0 10302 0 0 11031 0 0 15113 0 0 11318 0 0 9995.8 0 0 10576 0 0 3932.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 44757000 44757000 0 0 NaN 3134 1699 542 542 4617 4925 5246 5827 5246 5827 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6489 5246 5827 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6489 5246 5827 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6489 Q96JM7 608 Q96JM7 Q96JM7 Lethal(3)malignant brain tumor-like protein 3 L3MBTL3 sp|Q96JM7|LMBL3_HUMAN Lethal(3)malignant brain tumor-like protein 3 OS=Homo sapiens GN=L3MBTL3 PE=1 SV=2 0.963931 14.2705 0.0100668 74.812 56.422 74.812 1 S DRIFPDRLSGEMPPASPSFPRNKRTDANESS X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPXXXXXXXXXX LSGEMPPAS(0.964)PS(0.036)FPR LS(-49.37)GEMPPAS(14.27)PS(-14.27)FPR 9 3 0.053439 5046.1 0 0 5503.7 0 0 6014.7 0 0 5335.4 0 0 5887.2 0 0 5398.6 0 0 4942.6 0 0 5169.4 0 0 4851.4 0 0 3401 0 0 4778.5 0 0 5198.2 0 0 5997.5 0 0 5489.5 0 0 5968.5 0 0 5412 0 0 5074 0 0 5296.7 0 0 4790.8 0 0 3322.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13919000 13919000 0 0 NaN 3135 1700 608 608 2555 2699 2897 3230 2897 3230 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14956 2897 3230 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14956 2897 3230 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14956 Q96JN0 42 Q96JN0 Q96JN0 Ligand-dependent corepressor LCOR sp|Q96JN0|LCOR_HUMAN Ligand-dependent corepressor OS=Homo sapiens GN=LCOR PE=1 SV=2 0.465072 0 1.90291E-05 132.26 107.96 132.26 S STKNQSLPKASPVTTSPTAATTQNPVLSKLL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AS(0.001)PVT(0.058)T(0.465)S(0.465)PT(0.011)AATTQNPVLSK AS(-25.09)PVT(-9.06)T(0)S(0)PT(-16.38)AAT(-62.5)T(-65.94)QNPVLS(-114.2)K 7 3 -0.04648 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3136 1701 42 42 489 520 559 624 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16056 559 624 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16056 559 624 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16056 Q96JP5 83 Q96JP5 Q96JP5 E3 ubiquitin-protein ligase ZFP91 ZFP91 sp|Q96JP5|ZFP91_HUMAN E3 ubiquitin-protein ligase ZFP91 OS=Homo sapiens GN=ZFP91 PE=1 SV=1 0.816561 7.49893 2.24841E-07 143.9 128.31 143.9 1 S VSRRRKAEYPRRRRSSPSARPPDVPGQQPQA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RS(0.145)S(0.817)PS(0.038)ARPPDVPGQQPQAAK RS(-7.5)S(7.5)PS(-13.3)ARPPDVPGQQPQAAK 3 3 -0.34508 12777 0 0 10965 0 0 13628 0 0 13242 0 0 8521.4 0 0 13959 0 0 10218 0 0 12065 0 0 12978 0 0 5141.4 0 0 12094 0 0 10371 0 0 13615 0 0 13469 0 0 8975.7 0 0 13946 0 0 10395 0 0 12330 0 0 12689 0 0 5120.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14848000 14848000 0 0 NaN 3137 1702 83 83 3505 3722 3968 4406 3968 4406 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8614 3968 4406 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8614 3968 4406 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8614 Q96JP5 103 Q96JP5 Q96JP5 E3 ubiquitin-protein ligase ZFP91 ZFP91 sp|Q96JP5|ZFP91_HUMAN E3 ubiquitin-protein ligase ZFP91 OS=Homo sapiens GN=ZFP91 PE=1 SV=1 0.934872 11.5698 0.00624479 92.866 60.858 92.866 1 S PPDVPGQQPQAAKSPSPVQGKKSPRLLCIEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX S(0.065)PS(0.935)PVQGK S(-11.57)PS(11.57)PVQGK 3 2 1.0947 76763 0 0 72433 0 0 86813 0 0 78467 0 0 51659 0 0 87422 0 0 59891 0 0 74089 0 0 79452 0 0 5456.6 0 0 72675 0 0 68459 0 0 86423 0 0 80343 0 0 54634 0 0 87071 0 0 61104 0 0 74998 0 0 77566 0 0 6852.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 93798000 93798000 0 0 NaN 3138 1702 103 103 4193 4468 4762 5287 4762 5287 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8359 4762 5287 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8359 4762 5287 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8359 Q96JY6 197 Q96JY6 Q96JY6 PDZ and LIM domain protein 2 PDLIM2 sp|Q96JY6|PDLI2_HUMAN PDZ and LIM domain protein 2 OS=Homo sapiens GN=PDLIM2 PE=1 SV=1 0.999993 51.864 0.00365831 91.64 65.521 91.64 1 S GLGRAGDSAVLVLPPSPGPRSSRPSMDSEGG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPXXXXXXXXXXX AGDSAVLVLPPS(1)PGPR AGDS(-51.86)AVLVLPPS(51.86)PGPR 12 3 0.53495 32765 0 0 13161 0 0 33496 0 0 14261 0 0 16439 0 0 34063 0 0 15491 0 0 20589 0 0 13071 0 0 39324 0 0 31007 0 0 12439 0 0 33476 0 0 14893 0 0 17674 0 0 33165 0 0 15748 0 0 22359 0 0 13000 0 0 37505 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 29963000 29963000 0 0 NaN 3139 1703 197 197 192 200 215;216 241;242;243 215 242 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17667 215 242 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17667 215 242 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17667 Q96JY6 134 Q96JY6 Q96JY6 PDZ and LIM domain protein 2 PDLIM2 sp|Q96JY6|PDLI2_HUMAN PDZ and LIM domain protein 2 OS=Homo sapiens GN=PDLIM2 PE=1 SV=1 0.999955 43.4546 2.13177E-08 165.96 147.19 165.96 1 S RSSYSSPTSLSPRAGSPFSPPPSSSSLTGEA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP AGS(1)PFSPPPSSSSLTGEAAISR AGS(43.45)PFS(-43.45)PPPS(-78.76)S(-85.94)S(-92.89)S(-98.46)LT(-108.75)GEAAIS(-128.84)R 3 3 0.0079407 7808.5 0 0 5912.9 0 0 7592.7 0 0 5671.9 0 0 7000.1 0 0 8584.1 0 0 5776.8 0 0 6546.3 0 0 5876.7 0 0 20860 0 0 7388 0 0 5584.4 0 0 7648.3 0 0 5885.2 0 0 7121.5 0 0 8488 0 0 5941.8 0 0 7274 0 0 5794.3 0 0 19794 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 44760000 44760000 0 0 NaN 3140 1703 134 134 227 241 259 290 259 290 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16515 259 290 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16515 259 290 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16515 Q96K21 144 Q96K21 Q96K21 Abscission/NoCut checkpoint regulator ZFYVE19 sp|Q96K21|ANCHR_HUMAN Abscission/NoCut checkpoint regulator OS=Homo sapiens GN=ZFYVE19 PE=1 SV=3 1 75.3176 0.000779519 120.65 89.585 120.65 1 S HEVLTRGSSANASKWSPPQNYKKRVAALEAK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPXXXXXXXXX WS(1)PPQNYK WS(75.32)PPQNY(-75.32)K 2 2 -0.23771 57080 0 0 87879 0 0 58459 0 0 77456 0 0 76758 0 0 56177 0 0 83010 0 0 73179 0 0 86653 0 0 53871 0 0 54017 0 0 82957 0 0 59021 0 0 79823 0 0 76906 0 0 57573 0 0 84297 0 0 74369 0 0 85346 0 0 52420 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 49818000 49818000 0 0 NaN 3141 1705 144 144 5350 5699 6077 6754;6755 6077 6755 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16200 6077 6755 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16200 6077 6755 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16200 Q96K76 933 Q96K76 Q96K76 Ubiquitin carboxyl-terminal hydrolase 47 USP47 sp|Q96K76|UBP47_HUMAN Ubiquitin carboxyl-terminal hydrolase 47 OS=Homo sapiens GN=USP47 PE=1 SV=3 0.916241 10.39 1.48318E-05 130.81 117.22 130.81 1 S SASVDNRELEQHIQTSDPENFQSEERSDSDV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPXXXXX ELEQHIQT(0.084)S(0.916)DPENFQSEER ELEQHIQT(-10.39)S(10.39)DPENFQS(-54.02)EER 9 3 -1.5853 7981.9 0 0 8856.5 0 0 7867.8 0 0 7958.1 0 0 7493.4 0 0 7346.3 0 0 8272.1 0 0 8561.9 0 0 8270.8 0 0 14345 0 0 7552.5 0 0 8361.3 0 0 7925.9 0 0 8216.1 0 0 7637.5 0 0 7433.1 0 0 8382.8 0 0 8973.3 0 0 8160.8 0 0 13706 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15218000 15218000 0 0 NaN 3142 1706 933 933 1027 1083 1171 1290 1171 1290 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12881 1171 1290 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12881 1171 1290 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12881 Q96K76 832 Q96K76 Q96K76 Ubiquitin carboxyl-terminal hydrolase 47 USP47 sp|Q96K76|UBP47_HUMAN Ubiquitin carboxyl-terminal hydrolase 47 OS=Homo sapiens GN=USP47 PE=1 SV=3 0.977304 16.6828 0.0057837 85.808 73.041 85.808 1 S RHANTIRLFVLLPEQSPVSYSKRTAYQKAGG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPXXXXXXXXX LFVLLPEQS(0.977)PVS(0.021)Y(0.002)SK LFVLLPEQS(16.68)PVS(-16.68)Y(-28.13)S(-36.58)K 9 3 -0.90521 5608.7 0 0 8517.4 0 0 4440.2 0 0 7733.7 0 0 6623.4 0 0 5840.7 0 0 6085.7 0 0 7189.1 0 0 9582 0 0 27516 0 0 5302.9 0 0 8041.6 0 0 4563.9 0 0 7958.1 0 0 6588.2 0 0 6007.6 0 0 6316.2 0 0 7988.1 0 0 9306.3 0 0 26076 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 35230000 35230000 0 0 NaN 3143 1706 832 832 2356 2489 2678 2991 2678 2991 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24013 2678 2991 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24013 2678 2991 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24013 Q96K83 608 Q96K83 Q96K83 Zinc finger protein 521 ZNF521 sp|Q96K83|ZN521_HUMAN Zinc finger protein 521 OS=Homo sapiens GN=ZNF521 PE=1 SV=1 0.665302 2.98366 3.86889E-23 276.8 248.66 276.8 1 S NYIHNGKKSRALSPLSPVAIEQTSLKMMQAV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPXXXXX ALS(0.335)PLS(0.665)PVAIEQTSLK ALS(-2.98)PLS(2.98)PVAIEQT(-173.08)S(-202.82)LK 6 3 -0.72223 9024.2 0 0 2865.1 0 0 9436.2 0 0 2832.7 0 0 8312.3 0 0 9130.1 0 0 10152 0 0 7178.8 0 0 2582.1 0 0 11122 0 0 8540.7 0 0 2706.3 0 0 9467.7 0 0 3011.7 0 0 8520.5 0 0 8866.9 0 0 10038 0 0 7611.6 0 0 2868.8 0 0 10639 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 56881000 56881000 0 0 NaN 3144 1707 608 608 316 337 360 400 360 400 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22693 360 400 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22693 360 400 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22693 Q96K83 546 Q96K83 Q96K83 Zinc finger protein 521 ZNF521 sp|Q96K83|ZN521_HUMAN Zinc finger protein 521 OS=Homo sapiens GN=ZNF521 PE=1 SV=1 0.999997 54.8024 3.23766E-07 173.04 134.24 173.04 1 S HIRQVHCDLSGSRFGSPVLGTPKEPVVEVYS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX FGS(1)PVLGTPK FGS(54.8)PVLGT(-54.8)PK 3 2 0.55983 27236 0 0 6279.2 0 0 26947 0 0 5774.7 0 0 23456 0 0 28092 0 0 21958 0 0 17855 0 0 7142.4 0 0 13790 0 0 25771 0 0 5928.9 0 0 27105 0 0 6318.7 0 0 23974 0 0 27060 0 0 22017 0 0 18722 0 0 7675.8 0 0 13398 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26793000 26793000 0 0 NaN 3145 1707 546 546 1268 1335 1437 1594 1437 1594 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18074 1437 1594 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18074 1437 1594 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18074 Q96K83 273 Q96K83 Q96K83 Zinc finger protein 521 ZNF521 sp|Q96K83|ZN521_HUMAN Zinc finger protein 521 OS=Homo sapiens GN=ZNF521 PE=1 SV=1 1 183.385 1.56182E-10 183.39 160.58 183.39 1 S PEDLQKHIAECHPECSPNEDRAALQCVYCHE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPXXXXXXXXXX HIAECHPECS(1)PNEDR HIAECHPECS(183.39)PNEDR 10 3 -0.49004 8113.4 0 0 3099.4 0 0 9318.6 0 0 3594.4 0 0 5987.5 0 0 8883.1 0 0 5295.6 0 0 5572.3 0 0 2817.1 0 0 2481.9 0 0 7681.9 0 0 2930.7 0 0 9271.9 0 0 3745.4 0 0 6260.7 0 0 8631.1 0 0 5355.8 0 0 5792.5 0 0 2884.8 0 0 2465.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11967000 11967000 0 0 NaN 3146 1707 273 273 1718 1812 1957 2181 1957 2181 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6281 1957 2181 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6281 1957 2181 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6281 Q96KB5 59 Q96KB5 Q96KB5 Lymphokine-activated killer T-cell-originated protein kinase PBK sp|Q96KB5|TOPK_HUMAN Lymphokine-activated killer T-cell-originated protein kinase OS=Homo sapiens GN=PBK PE=1 SV=3 0.998198 27.4338 8.21532E-05 127.52 90.826 127.52 1 S VNVYLMKRSPRGLSHSPWAVKKINPICNDHY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX GLS(0.002)HS(0.998)PWAVK GLS(-27.43)HS(27.43)PWAVK 5 3 -0.65751 7030.7 0 0 16183 0 0 8192.1 0 0 16230 0 0 5377.5 0 0 8186.7 0 0 5533.1 0 0 9676.3 0 0 16227 0 0 1770.6 0 0 6657.2 0 0 15288 0 0 8148 0 0 16532 0 0 5635.5 0 0 8586.9 0 0 5917.6 0 0 9701.6 0 0 15557 0 0 1891.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19414000 19414000 0 0 NaN 3147 1708 59 59 1513 1593 1722 1914 1722 1914 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15085 1722 1914 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15085 1722 1914 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15085 Q96KQ7 173 Q96KQ7 Q96KQ7 Histone-lysine N-methyltransferase EHMT2 EHMT2 sp|Q96KQ7|EHMT2_HUMAN Histone-lysine N-methyltransferase EHMT2 OS=Homo sapiens GN=EHMT2 PE=1 SV=3 0.715911 4.93736 0.002719 93.392 79.082 93.392 1 S QGAAAAGSEPPPATTSPEGQPKVHRARKTMS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPXXXXXXXXX LLSMPGAQGAAAAGS(0.03)EPPPAT(0.025)T(0.23)S(0.716)PEGQPK LLS(-78.23)MPGAQGAAAAGS(-13.83)EPPPAT(-14.61)T(-4.94)S(4.94)PEGQPK 23 4 -0.4046 8289.2 0 0 11421 0 0 9609.4 0 0 10828 0 0 7519.6 0 0 9002.1 0 0 7374.6 0 0 10361 0 0 11439 0 0 19023 0 0 7848.7 0 0 10786 0 0 9574.4 0 0 11125 0 0 7756.1 0 0 9157.6 0 0 7625 0 0 10913 0 0 11115 0 0 18152 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27013000 27013000 0 0 NaN 3148 1709 173 173 2458 2596 2790 3117 2790 3117 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18815 2790 3117 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18815 2790 3117 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18815 Q96KQ7 140 Q96KQ7 Q96KQ7 Histone-lysine N-methyltransferase EHMT2 EHMT2 sp|Q96KQ7|EHMT2_HUMAN Histone-lysine N-methyltransferase EHMT2 OS=Homo sapiens GN=EHMT2 PE=1 SV=3 0.986925 19.8351 0.00566054 86.084 69.59 86.084 1 S SCPSRAKMSMTGAGKSPPSVQSLAMRLLSMP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPXXXXX MSMTGAGKS(0.987)PPS(0.01)VQS(0.002)LAMR MS(-38.23)MT(-35.28)GAGKS(19.84)PPS(-19.84)VQS(-26.17)LAMR 9 3 -0.45181 9258.6 0 0 11461 0 0 11275 0 0 9444.4 0 0 8650.9 0 0 12666 0 0 10560 0 0 11119 0 0 10552 0 0 14348 0 0 8768.6 0 0 10815 0 0 11209 0 0 9872 0 0 8960.9 0 0 12560 0 0 10657 0 0 11645 0 0 10412 0 0 13768 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20610000 20610000 0 0 NaN 3149 1709 140 140 2744 2910 3120 3467 3120 3467 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17716 3120 3467 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17716 3120 3467 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17716 Q96KQ7 119 Q96KQ7 Q96KQ7 Histone-lysine N-methyltransferase EHMT2 EHMT2 sp|Q96KQ7|EHMT2_HUMAN Histone-lysine N-methyltransferase EHMT2 OS=Homo sapiens GN=EHMT2 PE=1 SV=3 0.61682 4.18784 0.00889034 88.056 40.859 88.056 1 S GGRILLGHATKSFPSSPSKGGSCPSRAKMSM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX S(0.003)FPS(0.145)S(0.617)PS(0.235)K S(-23.22)FPS(-6.29)S(4.19)PS(-4.19)K 5 2 0.022482 39113 0 0 32197 0 0 39939 0 0 33098 0 0 21501 0 0 36888 0 0 22084 0 0 30348 0 0 33669 0 0 9515.8 0 0 37014 0 0 30420 0 0 39944 0 0 33990 0 0 22927 0 0 36741 0 0 22769 0 0 30981 0 0 32730 0 0 9662.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12698000 12698000 0 0 NaN 3150 1709 119 119 3752 3992 4256 4731 4256 4731 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11847 4256 4731 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11847 4256 4731 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11847 Q96L91 165 Q96L91 Q96L91 E1A-binding protein p400 EP400 sp|Q96L91|EP400_HUMAN E1A-binding protein p400 OS=Homo sapiens GN=EP400 PE=1 SV=4 0.806044 7.17239 0.0104631 74.568 50.705 74.568 1 S VRAGAPGPGLGLCSSSPTGGFVDASVLVRQI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPPPPPPPPPXX AGAPGPGLGLCS(0.012)S(0.155)S(0.806)PT(0.027)GGFVDASVLVR AGAPGPGLGLCS(-18.1)S(-7.17)S(7.17)PT(-14.78)GGFVDAS(-40.4)VLVR 14 3 1.4605 11242 0 0 16728 0 0 14234 0 0 15391 0 0 10201 0 0 16018 0 0 14660 0 0 17092 0 0 17894 0 0 50912 0 0 10649 0 0 15794 0 0 14120 0 0 15895 0 0 10656 0 0 16137 0 0 14797 0 0 18637 0 0 17519 0 0 48335 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37810000 37810000 0 0 NaN 3151 1710 165 165 186 194 209 234 209 234 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23237 209 234 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23237 209 234 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23237 Q96L91 736 Q96L91 Q96L91 E1A-binding protein p400 EP400 sp|Q96L91|EP400_HUMAN E1A-binding protein p400 OS=Homo sapiens GN=EP400 PE=1 SV=4 0.95505 13.2827 0.00134901 106.88 65.998 106.88 1 S SSPVNRPSSATNKALSPVTSRTPGVVASAPT X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX ALS(0.955)PVT(0.045)SR ALS(13.28)PVT(-13.28)S(-39.8)R 3 2 -0.33437 25164 0 0 24069 0 0 25774 0 0 23226 0 0 19961 0 0 22930 0 0 17148 0 0 22391 0 0 24288 0 0 3470.1 0 0 23814 0 0 22732 0 0 25841 0 0 23895 0 0 20566 0 0 22997 0 0 17786 0 0 22586 0 0 23663 0 0 3785.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 70832000 70832000 0 0 NaN 3152 1710 736 736 318 339 362 402 362 402 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10333 362 402 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10333 362 402 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10333 Q96L91 722 Q96L91 Q96L91 E1A-binding protein p400 EP400 sp|Q96L91|EP400_HUMAN E1A-binding protein p400 OS=Homo sapiens GN=EP400 PE=1 SV=4 0.844866 7.3608 5.36508E-07 144.97 89.713 144.97 1 S APVSGSGPGPSPARSSPVNRPSSATNKALSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXXXXXPPPPPPPPPPPPPXXXX S(0.155)S(0.845)PVNRPSSATNK S(-7.36)S(7.36)PVNRPS(-94.65)S(-100.43)AT(-107.94)NK 2 3 0.20541 17466 0 0 20933 0 0 18704 0 0 21039 0 0 16661 0 0 18151 0 0 18891 0 0 18829 0 0 22602 0 0 2159.5 0 0 16532 0 0 19775 0 0 18742 0 0 21549 0 0 17063 0 0 18335 0 0 19224 0 0 18926 0 0 22144 0 0 2469.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 40972000 40972000 0 0 NaN 3153 1710 722 722 4404 4692 4996 5543 4996 5543 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6629 4996 5543 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6629 4996 5543 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6629 Q96L91;Q6ZTU2 321;310 Q96L91 Q96L91 E1A-binding protein p400;EP400 N-terminal-like protein EP400;EP400NL sp|Q96L91|EP400_HUMAN E1A-binding protein p400 OS=Homo sapiens GN=EP400 PE=1 SV=4;sp|Q6ZTU2|E400N_HUMAN EP400 N-terminal-like protein OS=Homo sapiens GN=EP400NL PE=2 SV=2 0.774528 6.28621 8.77104E-08 162.19 143.79 162.19 1 S GGAAGFGMTSPPPPTSPSRTAVPPGLSSLPL X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX TPGVLLPGAGGAAGFGMTSPPPPT(0.043)S(0.775)PS(0.182)R T(-155.62)PGVLLPGAGGAAGFGMT(-69.95)S(-53.2)PPPPT(-12.52)S(6.29)PS(-6.29)R 25 3 -0.099711 5896.5 0 0 7487.5 0 0 6307.8 0 0 6250.2 0 0 7112.8 0 0 7174.9 0 0 6875.7 0 0 6482.8 0 0 6709.8 0 0 47827 0 0 5581.1 0 0 7066.1 0 0 6337.4 0 0 6507.9 0 0 7167.1 0 0 7231.9 0 0 7005.7 0 0 7970.6 0 0 6627.6 0 0 45185 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 87453000 87453000 0 0 NaN 3154 1710 321 321 4825 5149;5150 5488;5489 6106;6107 5488 6106 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19762 5488 6106 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19762 5488 6106 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19762 Q96LT9 108 Q96LT9 Q96LT9 RNA-binding protein 40 RNPC3 sp|Q96LT9|RBM40_HUMAN RNA-binding protein 40 OS=Homo sapiens GN=RNPC3 PE=1 SV=1 0.999884 41.2836 1.75772E-07 165.13 130.69 165.13 1 S HTLVVEFAKEQDRVHSPCPTSGSEKKKRSDD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPXXXXXX EQDRVHS(1)PCPTSGSEK EQDRVHS(41.28)PCPT(-41.28)S(-43.8)GS(-74.82)EK 7 3 0.060422 13595 0 0 16444 0 0 15209 0 0 16399 0 0 14100 0 0 15566 0 0 17136 0 0 17740 0 0 19065 0 0 2596.2 0 0 12871 0 0 15534 0 0 15214 0 0 16827 0 0 14419 0 0 15672 0 0 17350 0 0 17789 0 0 18729 0 0 2855.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29972000 29972000 0 0 NaN 3155 1711 108 108 1097 1155 1243 1367 1243 1367 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6408 1243 1367 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6408 1243 1367 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6408 Q96LW4 255 Q96LW4 Q96LW4 DNA-directed primase/polymerase protein PRIMPOL sp|Q96LW4|PRIPO_HUMAN DNA-directed primase/polymerase protein OS=Homo sapiens GN=PRIMPOL PE=1 SV=2 0.99974 38.2913 3.5338E-05 125.45 97.798 125.45 1 S EESWTSNSKKLERLGSAEQSSPDLSFLVVKN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX LGS(1)AEQSSPDLSFLVVK LGS(38.29)AEQS(-39.51)S(-38.29)PDLS(-88.97)FLVVK 3 3 0.86142 14917 0 0 10192 0 0 14475 0 0 14216 0 0 16442 0 0 11638 0 0 18211 0 0 16981 0 0 12919 0 0 36135 0 0 14113 0 0 9650.8 0 0 14628 0 0 14309 0 0 16590 0 0 11915 0 0 18308 0 0 17915 0 0 12972 0 0 34418 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 81265000 81265000 0 0 NaN 3156 1712 255 255 2379 2516 2708 3026 2708 3026 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23672 2708 3026 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23672 2708 3026 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23672 Q96MG7 64 Q96MG7 Q96MG7 Melanoma-associated antigen G1 NDNL2 sp|Q96MG7|MAGG1_HUMAN Melanoma-associated antigen G1 OS=Homo sapiens GN=NDNL2 PE=1 SV=1 0.999949 42.8911 0.00617663 84.689 65.857 84.689 1 S STSRGPGGSQGSQGPSPQGARRAQAAPAVGP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPXXXXXXXXXX GPGGSQGSQGPS(1)PQGAR GPGGS(-72.15)QGS(-42.89)QGPS(42.89)PQGAR 12 3 -0.65857 4166.6 0 0 4084.6 0 0 4146 0 0 3677.2 0 0 3763.2 0 0 3885 0 0 3059.4 0 0 2874.2 0 0 3793.2 0 0 2089.8 0 0 3942.6 0 0 3856.2 0 0 4169.9 0 0 3803.8 0 0 3832.3 0 0 3876.1 0 0 3168.1 0 0 2985.2 0 0 3711.6 0 0 2034.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6693800 6693800 0 0 NaN 3157 1715 64 64 1542 1624 1753 1946 1753 1946 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5795 1753 1946 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5795 1753 1946 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5795 Q96MU7 146 Q96MU7 Q96MU7 YTH domain-containing protein 1 YTHDC1 sp|Q96MU7|YTDC1_HUMAN YTH domain-containing protein 1 OS=Homo sapiens GN=YTHDC1 PE=1 SV=3 0.936324 11.6748 9.70104E-05 117.97 91.614 117.97 1 S EKTCVRKRDPERRAKSPTPDGSERIGLEVDR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX AKS(0.936)PT(0.064)PDGSER AKS(11.67)PT(-11.67)PDGS(-53.77)ER 3 3 0.11103 9931.5 0 0 11017 0 0 10270 0 0 11002 0 0 11346 0 0 10896 0 0 11482 0 0 13630 0 0 12569 0 0 2440.3 0 0 9399 0 0 10407 0 0 10335 0 0 11296 0 0 11454 0 0 10966 0 0 11711 0 0 13639 0 0 12356 0 0 2613.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22883000 22883000 0 0 NaN 3158 1716 146 146 277 298 319 356 319 356 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6165 319 356 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6165 319 356 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6165 Q96MU7 308 Q96MU7 Q96MU7 YTH domain-containing protein 1 YTHDC1 sp|Q96MU7|YTDC1_HUMAN YTH domain-containing protein 1 OS=Homo sapiens GN=YTHDC1 PE=1 SV=3 1 167.179 2.11607E-06 167.18 125.49 167.18 1 S GSDEKKKERKRARGISPIVFDRSGSSASESY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX GIS(1)PIVFDR GIS(167.18)PIVFDR 3 2 0.10523 13353 0 0 18048 0 0 13142 0 0 18683 0 0 17376 0 0 11241 0 0 18467 0 0 16211 0 0 18569 0 0 8446 0 0 12635 0 0 17053 0 0 13299 0 0 19025 0 0 17399 0 0 11677 0 0 18748 0 0 16323 0 0 18318 0 0 8328.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 261930000 261930000 0 0 NaN 3159 1716 308 308 1478 1555 1677 1857 1677 1857 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19286 1677 1857 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19286 1677 1857 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19286 Q96MU7 515 Q96MU7 Q96MU7 YTH domain-containing protein 1 YTHDC1 sp|Q96MU7|YTDC1_HUMAN YTH domain-containing protein 1 OS=Homo sapiens GN=YTHDC1 PE=1 SV=3 1 54.9816 0.0293803 54.982 32.242 54.982 1 S LYQVIHKMRHKRRMHSQPRSRGRPSRREPVR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX RMHS(1)QPR RMHS(54.98)QPR 4 3 -0.15458 1756.4 0 0 1360.2 0 0 2166.2 0 0 1177 0 0 1646 0 0 1445.1 0 0 1354.4 0 0 1512.8 0 0 1388.5 0 0 1110.6 0 0 1663.5 0 0 1283.9 0 0 2150.7 0 0 1224 0 0 1697 0 0 1439.5 0 0 1393.6 0 0 1548.3 0 0 1368.6 0 0 1080.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1310000 1310000 0 0 NaN 3160 1716 515 515 3354 3556 3794 4212 3794 4212 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4469 3794 4212 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4469 3794 4212 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4469 Q96MY1 295 Q96MY1 Q96MY1 Nucleolar protein 4-like NOL4L sp|Q96MY1|NOL4L_HUMAN Nucleolar protein 4-like OS=Homo sapiens GN=NOL4L PE=1 SV=2 0.844069 7.33449 0.000964067 99.059 81.57 99.059 1 S TRKAAKRMRLEIYQSSQDEPIALDKQHSRDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPXXXXXX LEIYQS(0.156)S(0.844)QDEPIALDK LEIY(-58.97)QS(-7.33)S(7.33)QDEPIALDK 7 3 0.3502 4007.9 0 0 4697.2 0 0 4320.1 0 0 3942.6 0 0 6995.6 0 0 4562.2 0 0 6414.5 0 0 6187.8 0 0 4617.5 0 0 33483 0 0 3793.7 0 0 4433 0 0 4363.8 0 0 4104.2 0 0 6931.3 0 0 4628.7 0 0 6508.1 0 0 7152.8 0 0 4632.3 0 0 31672 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8992800 8992800 0 0 NaN 3161 1717 295 295 2329 2462 2651 2963 2651 2963 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21432 2651 2963 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21432 2651 2963 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21432 Q96N64 81 Q96N64 Q96N64 PWWP domain-containing protein 2A PWWP2A sp|Q96N64|PWP2A_HUMAN PWWP domain-containing protein 2A OS=Homo sapiens GN=PWWP2A PE=1 SV=2 1 159.395 3.93739E-07 159.4 131.91 159.4 1 S PPLPPPPPPPGELARSPEAVGPELEAEEKLS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPXX S(1)PEAVGPELEAEEK S(159.4)PEAVGPELEAEEK 1 3 1.2672 11754 0 0 12572 0 0 12438 0 0 13740 0 0 10946 0 0 12599 0 0 11264 0 0 11393 0 0 13611 0 0 7159.6 0 0 11125 0 0 11883 0 0 12468 0 0 14018 0 0 11202 0 0 12678 0 0 11515 0 0 11690 0 0 13330 0 0 7005.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16146000 16146000 0 0 NaN 3162 1718 81 81 4087 4358 4648 5161 4648 5161 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15708 4648 5161 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15708 4648 5161 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15708 Q96N66 285 Q96N66 Q96N66 Lysophospholipid acyltransferase 7 MBOAT7 sp|Q96N66|MBOA7_HUMAN Lysophospholipid acyltransferase 7 OS=Homo sapiens GN=MBOAT7 PE=1 SV=2 0.834374 7.02232 3.93059E-07 141.31 125.77 141.31 1 S ARAGGGPTLQCPPPSSPEKAASLEYDYETIR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPXXXXXXXXXXXX AGGGPTLQCPPPS(0.166)S(0.834)PEK AGGGPT(-103.91)LQCPPPS(-7.02)S(7.02)PEK 14 3 0.34266 12225 0 0 15471 0 0 10318 0 0 15571 0 0 11481 0 0 10115 0 0 12406 0 0 11934 0 0 15672 0 0 8833.5 0 0 11561 0 0 14616 0 0 10515 0 0 15894 0 0 11598 0 0 10421 0 0 12673 0 0 12166 0 0 15325 0 0 8593.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16208000 16208000 0 0 NaN 3163 1719 285 285 200 209 225 253 225 253 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11965 225 253 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11965 225 253 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11965 Q96N67 434 Q96N67 Q96N67 Dedicator of cytokinesis protein 7 DOCK7 sp|Q96N67|DOCK7_HUMAN Dedicator of cytokinesis protein 7 OS=Homo sapiens GN=DOCK7 PE=1 SV=4 0.861468 7.9369 0.00975801 81.263 36.381 81.263 1 S STEVEISTGERKGSWSERRNSSIVGRRSLER X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX KGS(0.139)WS(0.861)ER KGS(-7.94)WS(7.94)ER 5 3 0.46075 20365 0 0 25602 0 0 21132 0 0 24740 0 0 45578 0 0 21677 0 0 44684 0 0 31894 0 0 26370 0 0 2597.3 0 0 19273 0 0 24181 0 0 21532 0 0 25405 0 0 44779 0 0 21998 0 0 45026 0 0 31674 0 0 26796 0 0 3183.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19423000 19423000 0 0 NaN 3164 1720 434 434 2085 2205 2374 2644 2374 2644 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8974 2374 2644 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8974 2374 2644 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8974 Q96N67 1383 Q96N67 Q96N67 Dedicator of cytokinesis protein 7 DOCK7 sp|Q96N67|DOCK7_HUMAN Dedicator of cytokinesis protein 7 OS=Homo sapiens GN=DOCK7 PE=1 SV=4 0.998977 29.8964 0.0113418 74.46 45.373 74.46 1 S SCFEYKGKKVFERMNSLTFKKSKDMRAKLEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX MNS(0.999)LT(0.001)FKK MNS(29.9)LT(-29.9)FKK 3 3 -0.18459 11554 0 0 16448 0 0 9590.1 0 0 16001 0 0 18460 0 0 9847.5 0 0 18601 0 0 16215 0 0 16763 0 0 1954.8 0 0 10926 0 0 15536 0 0 9878.5 0 0 16357 0 0 18209 0 0 10229 0 0 18877 0 0 16077 0 0 16618 0 0 2216 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21197000 21197000 0 0 NaN 3165 1720 1383 1383 2718 2884 3093 3440 3093 3440 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16442 3093 3440 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16442 3093 3440 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16442 Q96N67 1434 Q96N67 Q96N67 Dedicator of cytokinesis protein 7 DOCK7 sp|Q96N67|DOCK7_HUMAN Dedicator of cytokinesis protein 7 OS=Homo sapiens GN=DOCK7 PE=1 SV=4 0.77867 5.83693 0.000139382 122.2 108.92 122.2 1 S GTYTIASPPERSPSGSAFGSQENLRWRKDMT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPXXXXXX S(0.012)PS(0.203)GS(0.779)AFGS(0.006)QENLR S(-18.2)PS(-5.84)GS(5.84)AFGS(-20.81)QENLR 5 2 0.45982 15393 0 0 18452 0 0 14873 0 0 19726 0 0 23604 0 0 17803 0 0 20913 0 0 17385 0 0 22340 0 0 12880 0 0 14564 0 0 17438 0 0 15108 0 0 20146 0 0 23401 0 0 17950 0 0 21456 0 0 17842 0 0 21982 0 0 12530 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 38919000 38919000 0 0 NaN 3166 1720 1434 1434 4174 4449 4742 5261 4742 5261 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12055 4742 5261 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12055 4742 5261 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12055 Q96N67 1438 Q96N67 Q96N67 Dedicator of cytokinesis protein 7 DOCK7 sp|Q96N67|DOCK7_HUMAN Dedicator of cytokinesis protein 7 OS=Homo sapiens GN=DOCK7 PE=1 SV=4 0.792751 5.92795 0.0405249 56.937 41.347 56.937 1 S IASPPERSPSGSAFGSQENLRWRKDMTHWRQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPXXXXXXXXXX S(0.001)PS(0.004)GS(0.202)AFGS(0.793)QENLR S(-28.59)PS(-23.32)GS(-5.93)AFGS(5.93)QENLR 9 2 3.5208 10392 0 0 12385 0 0 11485 0 0 11385 0 0 13426 0 0 11268 0 0 12567 0 0 12472 0 0 13613 0 0 12351 0 0 9837.7 0 0 11694 0 0 11524 0 0 11749 0 0 13499 0 0 11338 0 0 12862 0 0 12836 0 0 13388 0 0 11918 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9058900 9058900 0 0 NaN 3167 1720 1438 1438 4174 4449 4741 5260 4741 5260 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11846 4741 5260 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11846 4741 5260 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11846 Q96NL6 656 Q96NL6 Q96NL6 Sodium channel and clathrin linker 1 SCLT1 sp|Q96NL6|SCLT1_HUMAN Sodium channel and clathrin linker 1 OS=Homo sapiens GN=SCLT1 PE=1 SV=2 1 84.6051 0.0120928 84.605 55.808 84.605 1 S ILEHQEKANRLQRRLSQAEERAASASQQLSV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX RLS(1)QAEER RLS(84.61)QAEER 3 2 0.16027 10890 0 0 8162.7 0 0 13385 0 0 9164 0 0 11307 0 0 12868 0 0 12407 0 0 10974 0 0 9681.3 0 0 2850.6 0 0 10314 0 0 7716.7 0 0 13311 0 0 9407.7 0 0 11610 0 0 12714 0 0 12501 0 0 11167 0 0 9668.1 0 0 2938.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7152900 7152900 0 0 NaN 3168 1721 656 656 3339 3541 3778 4196 3778 4196 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6657 3778 4196 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6657 3778 4196 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6657 Q96PK6;Q9BQ04 215;304 Q96PK6 Q96PK6 RNA-binding protein 14;RNA-binding protein 4B RBM14;RBM4B sp|Q96PK6|RBM14_HUMAN RNA-binding protein 14 OS=Homo sapiens GN=RBM14 PE=1 SV=2;sp|Q9BQ04|RBM4B_HUMAN RNA-binding protein 4B OS=Homo sapiens GN=RBM4B PE=1 SV=1 1 55.2486 0.0402599 55.249 25.494 55.249 1 S GQARQPTPPFFGRDRSPLRRSPPRASYVAPL X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX DRS(1)PLRR DRS(55.25)PLRR 3 3 -0.13759 13327 0 0 17326 0 0 13670 0 0 16924 0 0 11709 0 0 12776 0 0 10904 0 0 14820 0 0 16750 0 0 4367.5 0 0 12612 0 0 16365 0 0 13720 0 0 17335 0 0 11992 0 0 13025 0 0 11298 0 0 14918 0 0 16279 0 0 4455.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 311060000 311060000 0 0 NaN 3169 1723 215 215 794;4129 842;4402 898 989 898 989 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5130 898 989 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5130 898 989 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5130 Q96PK6 618 Q96PK6 Q96PK6 RNA-binding protein 14 RBM14 sp|Q96PK6|RBM14_HUMAN RNA-binding protein 14 OS=Homo sapiens GN=RBM14 PE=1 SV=2 0.999998 56.1551 3.84976E-10 203.85 113.24 203.85 1 S GSDRRLAELSDYRRLSESQLSFRRSPTKSSL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX RLS(1)ESQLSFR RLS(56.16)ES(-56.16)QLS(-135.39)FR 3 3 0.017529 6944.8 0 0 4318.4 0 0 7565.7 0 0 3918.8 0 0 6691.9 0 0 7127.6 0 0 5742.8 0 0 5135.8 0 0 5328.1 0 0 1329 0 0 6573.9 0 0 4077.2 0 0 7570 0 0 4099.7 0 0 6828.7 0 0 6978.7 0 0 5879.9 0 0 5268.8 0 0 5274.8 0 0 1370.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 58838000 58838000 0 0 NaN 3170 1723 618 618 3322 3524 3761 4177 3761 4177 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14459 3761 4177 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14459 3761 4177 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14459 Q96PK6 220 Q96PK6 Q96PK6 RNA-binding protein 14 RBM14 sp|Q96PK6|RBM14_HUMAN RNA-binding protein 14 OS=Homo sapiens GN=RBM14 PE=1 SV=2 0.991052 20.4437 0.0207901 62.908 37.985 62.908 1 S PTPPFFGRDRSPLRRSPPRASYVAPLTAQPA X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX S(0.009)PLRRS(0.991)PPR S(-20.44)PLRRS(20.44)PPR 6 3 0.039442 12062 0 0 11171 0 0 10478 0 0 10419 0 0 19271 0 0 12563 0 0 21247 0 0 15313 0 0 10809 0 0 2365.4 0 0 11408 0 0 10548 0 0 10753 0 0 10778 0 0 19055 0 0 12536 0 0 21247 0 0 15325 0 0 11108 0 0 2581.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22851000 22851000 0 0 NaN 3171 1723 220 220 4129 4402 4693 5209 4693 5209 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6230 4693 5209 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6230 4693 5209 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6230 Q96PK6 582 Q96PK6 Q96PK6 RNA-binding protein 14 RBM14 sp|Q96PK6|RBM14_HUMAN RNA-binding protein 14 OS=Homo sapiens GN=RBM14 PE=1 SV=2 0.999655 34.6214 0.00389413 98.04 42.82 98.04 1 S ANANSTPPPYERTRLSPPRASYDDPYKKAVA X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX TRLS(1)PPR T(-34.62)RLS(34.62)PPR 4 2 0.12129 192500 0 0 209890 0 0 215940 0 0 181700 0 0 181380 0 0 202070 0 0 191910 0 0 213610 0 0 217400 0 0 2613.7 0 0 182240 0 0 198110 0 0 215690 0 0 188610 0 0 186270 0 0 201790 0 0 195540 0 0 213900 0 0 213430 0 0 7337.4 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 2 0 0 546900000 546900000 0 0 NaN 3172 1723 582 582 4893 5218 5558;5559 6178;6179;6180 5559 6179 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8125 5559 6179 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8125 5559 6179 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8125 Q96PU5 446 Q96PU5 Q96PU5 E3 ubiquitin-protein ligase NEDD4-like NEDD4L sp|Q96PU5|NED4L_HUMAN E3 ubiquitin-protein ligase NEDD4-like OS=Homo sapiens GN=NEDD4L PE=1 SV=2 0.5923 1.87224 1.38448E-07 163.8 144.22 163.8 1 S NSNNHLIEPQIRRPRSLSSPTVTLSAPLEGA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.592)LS(0.385)S(0.023)PTVTLSAPLEGAK S(1.87)LS(-1.87)S(-14.18)PT(-34.88)VT(-87.1)LS(-110.94)APLEGAK 1 3 2.9703 17192 0 0 20201 0 0 15835 0 0 20131 0 0 27741 0 0 17415 0 0 29071 0 0 20984 0 0 19725 0 0 9924.5 0 0 16263 0 0 19083 0 0 16171 0 0 20630 0 0 27459 0 0 17641 0 0 29272 0 0 21209 0 0 19860 0 0 9830.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 74913000 74913000 0 0 NaN 3173 1725 446 446 4002 4267 4555 5063 4555 5063 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20252 4555 5063 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20252 4555 5063 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20252 Q96PV6 314 Q96PV6 Q96PV6 Leukocyte receptor cluster member 8 LENG8 sp|Q96PV6|LENG8_HUMAN Leukocyte receptor cluster member 8 OS=Homo sapiens GN=LENG8 PE=1 SV=2 1 80.9793 0.00764853 80.979 15.479 80.979 1 S SREPLPGLTREPVAESPKKKRWEAASSLHPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPXXXXXXXXXXXXX EPVAES(1)PK EPVAES(80.98)PK 6 3 0.2626 14200 0 0 16013 0 0 15405 0 0 15157 0 0 13706 0 0 14378 0 0 14484 0 0 15033 0 0 17620 0 0 2879.9 0 0 13441 0 0 15122 0 0 15423 0 0 15602 0 0 14023 0 0 14461 0 0 14792 0 0 15140 0 0 17253 0 0 3059.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12097000 12097000 0 0 NaN 3174 1726 314 314 1096 1154 1242 1366 1242 1366 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9342 1242 1366 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9342 1242 1366 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9342 Q96PY6 1052 Q96PY6 Q96PY6 Serine/threonine-protein kinase Nek1 NEK1 sp|Q96PY6|NEK1_HUMAN Serine/threonine-protein kinase Nek1 OS=Homo sapiens GN=NEK1 PE=1 SV=2 0.997226 25.6478 4.94292E-06 155.33 127.17 155.33 1 S TGLFDANNPKMLRTCSLPDLSKLFRTLMDVP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX T(0.003)CS(0.997)LPDLSK T(-25.65)CS(25.65)LPDLS(-42.39)K 3 2 0.27734 46290 0 0 65701 0 0 53379 0 0 68490 0 0 65857 0 0 51232 0 0 67015 0 0 62741 0 0 65959 0 0 42095 0 0 43828 0 0 62081 0 0 53497 0 0 69876 0 0 66110 0 0 52346 0 0 68131 0 0 63756 0 0 65127 0 0 41089 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 51787000 51787000 0 0 NaN 3175 1727 1052 1052 4652 4963 5287 5875 5287 5875 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15867 5287 5875 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15867 5287 5875 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15867 Q96Q42 483 Q96Q42 Q96Q42 Alsin ALS2 sp|Q96Q42|ALS2_HUMAN Alsin OS=Homo sapiens GN=ALS2 PE=1 SV=2 1 71.1641 0.000190756 105.95 77.976 105.95 1 S VDIREEETEGGSRRLSLPGLLSQVSPRLLRK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX RLS(1)LPGLLSQVSPR RLS(71.16)LPGLLS(-71.16)QVS(-98.13)PR 3 3 -0.074354 2147.6 0 0 2769.1 0 0 1652.4 0 0 2871.2 0 0 3947.4 0 0 2281.7 0 0 4847.2 0 0 3896.6 0 0 3365.8 0 0 6257.3 0 0 2030.3 0 0 2616.4 0 0 1722.2 0 0 2932.3 0 0 3881.7 0 0 2345.4 0 0 4850.2 0 0 4034.5 0 0 3383.9 0 0 5982.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12985000 12985000 0 0 NaN 3176 1728 483 483 3331 3533 3770 4186 3770 4186 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23072 3770 4186 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23072 3770 4186 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23072 Q96Q89 1740 Q96Q89 Q96Q89 Kinesin-like protein KIF20B KIF20B sp|Q96Q89|KI20B_HUMAN Kinesin-like protein KIF20B OS=Homo sapiens GN=KIF20B PE=1 SV=3 0.994101 22.2664 4.8965E-07 153.36 127.49 153.36 1 S KKEGTLQKFGDFLQHSPSILQSKAKKIIETM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPXXXXXXXX FGDFLQHS(0.994)PS(0.006)ILQSK FGDFLQHS(22.27)PS(-22.27)ILQS(-92.53)K 8 3 -0.15283 21085 0 0 9654.7 0 0 20850 0 0 9303.3 0 0 6730.3 0 0 23630 0 0 6538.8 0 0 15253 0 0 9267.4 0 0 49181 0 0 19951 0 0 9118.5 0 0 20835 0 0 9804 0 0 7663.5 0 0 23034 0 0 6739.9 0 0 17107 0 0 9028.5 0 0 46662 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 10460000 10460000 0 0 NaN 3177 1729 1740 1740 1262 1327 1429 1585;1586 1429 1586 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21939 1429 1586 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21939 1429 1586 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21939 Q96QC0 313 Q96QC0 Q96QC0 Serine/threonine-protein phosphatase 1 regulatory subunit 10 PPP1R10 sp|Q96QC0|PP1RA_HUMAN Serine/threonine-protein phosphatase 1 regulatory subunit 10 OS=Homo sapiens GN=PPP1R10 PE=1 SV=1 0.941483 12.0653 1.79447E-10 178.54 157.72 178.54 1 S APVPGIKIKKKKKVLSPTAAKPSPFEGKTST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX VLS(0.941)PT(0.059)AAKPSPFEGK VLS(12.07)PT(-12.07)AAKPS(-70.88)PFEGK 3 3 -0.33406 64556 0 0 70170 0 0 67245 0 0 76595 0 0 47910 0 0 66306 0 0 52379 0 0 69895 0 0 74609 0 0 18630 0 0 61097 0 0 66324 0 0 67329 0 0 78087 0 0 49845 0 0 67001 0 0 53712 0 0 70532 0 0 72673 0 0 19160 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 314600000 314600000 0 0 NaN 3178 1730 313 313 5180;5181 5519;5520 5881;5882 6536;6537 5882 6537 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17618 5882 6537 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17618 5882 6537 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17618 Q96QD9 16 Q96QD9 Q96QD9 UAP56-interacting factor FYTTD1 sp|Q96QD9|UIF_HUMAN UAP56-interacting factor OS=Homo sapiens GN=FYTTD1 PE=1 SV=3 0.896086 9.43989 0.00305199 92.939 76.166 92.939 1 S MNRFGTRLVGATATSSPPPKARSNENLDKID X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPXXXXXXXXXXX LVGATAT(0.002)S(0.102)S(0.896)PPPK LVGAT(-44.12)AT(-26.65)S(-9.44)S(9.44)PPPK 9 3 -3.2097 8364.6 0 0 12363 0 0 9345.7 0 0 11799 0 0 9134 0 0 8444.6 0 0 10571 0 0 11323 0 0 13435 0 0 9372.3 0 0 7918.8 0 0 11676 0 0 9354.3 0 0 12096 0 0 9304.8 0 0 8667.9 0 0 10770 0 0 11529 0 0 13134 0 0 9087.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 39018000 39018000 0 0 NaN 3179 1731 16 16 2647 2794 2995 3333 2995 3333 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13786 2995 3333 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13786 2995 3333 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13786 Q96QE3 70 Q96QE3 Q96QE3 ATPase family AAA domain-containing protein 5 ATAD5 sp|Q96QE3|ATAD5_HUMAN ATPase family AAA domain-containing protein 5 OS=Homo sapiens GN=ATAD5 PE=1 SV=4 0.627054 2.4824 0.0107543 90.05 49.326 90.05 1 S APPKPSNILDYFRKTSPTNEKTQLGKECKIK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX KT(0.019)S(0.627)PT(0.354)NEK KT(-15.21)S(2.48)PT(-2.48)NEK 3 2 0.92026 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3180 1732 70 70 2254 2382 2564 2862 2564 2862 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7238 2564 2862 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7238 2564 2862 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7238 Q96QH2 382 Q96QH2 Q96QH2 PML-RARA-regulated adapter molecule 1 PRAM1 sp|Q96QH2|PRAM_HUMAN PML-RARA-regulated adapter molecule 1 OS=Homo sapiens GN=PRAM1 PE=1 SV=2 0.989808 21.6182 3.63621E-16 234.54 195.68 234.54 1 S KKPPQPELGGLPRTSSEPEFNSLPRKLLQPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX T(0.007)S(0.003)S(0.99)EPEFNSLPR T(-21.62)S(-24.68)S(21.62)EPEFNS(-69.1)LPR 3 2 0.237 21117 0 0 8817.7 0 0 21848 0 0 9598.3 0 0 14580 0 0 21754 0 0 14744 0 0 15672 0 0 8552.4 0 0 31536 0 0 19985 0 0 8334.2 0 0 21869 0 0 10003 0 0 15221 0 0 21246 0 0 14831 0 0 16906 0 0 8701.3 0 0 30057 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22790000 22790000 0 0 NaN 3181 1733 382 382 4955 5283 5626 6253 5626 6253 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14868 5626 6253 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14868 5626 6253 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14868 Q96QH2 345 Q96QH2 Q96QH2 PML-RARA-regulated adapter molecule 1 PRAM1 sp|Q96QH2|PRAM_HUMAN PML-RARA-regulated adapter molecule 1 OS=Homo sapiens GN=PRAM1 PE=1 SV=2 0.333333 0 6.22693E-07 139.3 116.06 139.3 S PKKPPQPELGDLTRTSSEPEVSVLPKRPRPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T(0.333)S(0.333)S(0.333)EPEVSVLPK T(0)S(0)S(0)EPEVS(-89.21)VLPK 2 3 -0.10496 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3182 1733 345 345 4956 5284 5627 6254 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16927 5627 6254 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16927 5627 6254 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16927 Q96QH2 346 Q96QH2 Q96QH2 PML-RARA-regulated adapter molecule 1 PRAM1 sp|Q96QH2|PRAM_HUMAN PML-RARA-regulated adapter molecule 1 OS=Homo sapiens GN=PRAM1 PE=1 SV=2 0.333333 0 6.22693E-07 139.3 116.06 139.3 S KKPPQPELGDLTRTSSEPEVSVLPKRPRPAE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T(0.333)S(0.333)S(0.333)EPEVSVLPK T(0)S(0)S(0)EPEVS(-89.21)VLPK 3 3 -0.10496 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3183 1733 346 346 4956 5284 5627 6254 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16927 5627 6254 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16927 5627 6254 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16927 Q96QT4 1477 Q96QT4 Q96QT4 Transient receptor potential cation channel subfamily M member 7 TRPM7 sp|Q96QT4|TRPM7_HUMAN Transient receptor potential cation channel subfamily M member 7 OS=Homo sapiens GN=TRPM7 PE=1 SV=1 0.887665 8.97736 3.91939E-07 139.64 107.81 139.64 1 S LSNNNTSENTLKRVSSLAGFTDCHRTSIPVH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX VS(0.112)S(0.888)LAGFTDCHR VS(-8.98)S(8.98)LAGFT(-115.17)DCHR 3 3 -0.2169 4440.7 0 0 4441.3 0 0 6165.3 0 0 5164.9 0 0 4591 0 0 5480.8 0 0 4090 0 0 4668.6 0 0 4965 0 0 1676.5 0 0 4208.5 0 0 4199.6 0 0 6088.7 0 0 5264 0 0 4745.7 0 0 5472.6 0 0 4211.3 0 0 4764.9 0 0 4861.9 0 0 1686.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9287700 9287700 0 0 NaN 3184 1734 1477 1477 5274 5621 5992 6658 5992 6658 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15304 5992 6658 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15304 5992 6658 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15304 Q96QT6 131 Q96QT6 Q96QT6 PHD finger protein 12 PHF12 sp|Q96QT6|PHF12_HUMAN PHD finger protein 12 OS=Homo sapiens GN=PHF12 PE=1 SV=2 0.81515 9.51767 2.09131E-10 181.06 143.71 181.06 1 S GHVNGLVDKSGKRTTSPSSDTDLLDRSASKT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX T(0.091)T(0.091)S(0.815)PS(0.002)SDTDLLDR T(-9.52)T(-9.52)S(9.52)PS(-25.25)S(-35.44)DT(-62.71)DLLDR 3 2 0.45895 12457 0 0 8977 0 0 13512 0 0 10270 0 0 11574 0 0 13207 0 0 11780 0 0 12130 0 0 8945.3 0 0 14326 0 0 11792 0 0 8487.6 0 0 13522 0 0 10513 0 0 11860 0 0 13121 0 0 11903 0 0 12641 0 0 8946.6 0 0 13770 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11813000 11813000 0 0 NaN 3185 1735 131 131 4990 5319 5667 6296 5667 6296 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13525 5667 6296 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13525 5667 6296 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13525 Q96RK0 904 Q96RK0 Q96RK0 Protein capicua homolog CIC sp|Q96RK0|CIC_HUMAN Protein capicua homolog OS=Homo sapiens GN=CIC PE=1 SV=2 0.815611 6.45819 0.00720238 82.62 63.584 82.62 1 S LQSVPSAPPPKAQSVSPVQAPPPGGSAQLLP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP AQS(0.184)VS(0.816)PVQAPPPGGSAQLLPGK AQS(-6.46)VS(6.46)PVQAPPPGGS(-44.39)AQLLPGK 5 3 0.4287 9963.7 0 0 10388 0 0 11477 0 0 10568 0 0 9686.3 0 0 10722 0 0 10175 0 0 10481 0 0 12385 0 0 16389 0 0 9433.9 0 0 9813.9 0 0 11449 0 0 10842 0 0 9944.4 0 0 10768 0 0 10394 0 0 11016 0 0 12127 0 0 15675 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15489000 15489000 0 0 NaN 3186 1737 904 904 406 434 469 523 469 523 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16977 469 523 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16977 469 523 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16977 Q96RK0 496 Q96RK0 Q96RK0 Protein capicua homolog CIC sp|Q96RK0|CIC_HUMAN Protein capicua homolog OS=Homo sapiens GN=CIC PE=1 SV=2 1 89.4403 0.00563259 89.44 54.72 89.44 1 S GEDPEGNKGFGRKVFSPVIRSSFTHCRPPLD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX KVFS(1)PVIR KVFS(89.44)PVIR 4 3 0.47112 13411 0 0 10574 0 0 13497 0 0 10249 0 0 7869.4 0 0 13740 0 0 6332.2 0 0 9818.4 0 0 10102 0 0 1217.4 0 0 12690 0 0 9986.7 0 0 13514 0 0 10599 0 0 8300 0 0 13569 0 0 6622.7 0 0 10037 0 0 9807.9 0 0 1373.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18341000 18341000 0 0 NaN 3187 1737 496 496 2263 2392 2575 2877 2575 2877 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16353 2575 2877 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16353 2575 2877 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16353 Q96RK0 173 Q96RK0 Q96RK0 Protein capicua homolog CIC sp|Q96RK0|CIC_HUMAN Protein capicua homolog OS=Homo sapiens GN=CIC PE=1 SV=2 0.65619 2.93863 0.000222795 112.08 64.796 112.08 1 S PEIQLPLPPGKRRTQSLSALPKERDSSSEKD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX RT(0.334)QS(0.656)LS(0.01)ALPK RT(-2.94)QS(2.94)LS(-18.06)ALPK 4 3 0.7639 14182 0 0 9817.7 0 0 15819 0 0 10889 0 0 9915.5 0 0 14945 0 0 8367.6 0 0 10214 0 0 12766 0 0 2571.6 0 0 13426 0 0 9280.5 0 0 15759 0 0 11180 0 0 10393 0 0 14744 0 0 8712.3 0 0 10506 0 0 12409 0 0 2657.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16999000 16999000 0 0 NaN 3188 1737 173 173 3529 3746 3992 4432 3992 4432 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12545 3992 4432 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12545 3992 4432 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12545 Q96RK0 739 Q96RK0 Q96RK0 Protein capicua homolog CIC sp|Q96RK0|CIC_HUMAN Protein capicua homolog OS=Homo sapiens GN=CIC PE=1 SV=2 0.866517 8.89821 3.77542E-08 158.2 140.92 158.2 1 S GVSLVYSDKKSAAATSPAPHLVAGPLLGTVG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP S(0.022)AAAT(0.112)S(0.867)PAPHLVAGPLLGTVGK S(-15.99)AAAT(-8.9)S(8.9)PAPHLVAGPLLGT(-128.92)VGK 6 3 1.1226 9025.9 0 0 10228 0 0 8536.7 0 0 9717.1 0 0 8796.3 0 0 9073.9 0 0 7515.8 0 0 10576 0 0 10657 0 0 18390 0 0 8539 0 0 9659.5 0 0 8624.9 0 0 9998.1 0 0 8896.1 0 0 9177.4 0 0 7797.9 0 0 11104 0 0 10382 0 0 17561 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9094700 9094700 0 0 NaN 3189 1737 739 739 3571 3794 4047 4502 4047 4502 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20157 4047 4502 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20157 4047 4502 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20157 Q96RK0 1245 Q96RK0 Q96RK0 Protein capicua homolog CIC sp|Q96RK0|CIC_HUMAN Protein capicua homolog OS=Homo sapiens GN=CIC PE=1 SV=2 0.653596 2.75726 5.91935E-08 172.74 88.686 172.74 1 S PAPPPLPETWTPTARSSPPLPPPAEERTSAK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(0.654)S(0.346)PPLPPPAEER S(2.76)S(-2.76)PPLPPPAEER 1 2 -0.21336 16823 0 0 13964 0 0 17021 0 0 15848 0 0 14896 0 0 16335 0 0 15093 0 0 16906 0 0 14837 0 0 25278 0 0 15920 0 0 13202 0 0 17102 0 0 16166 0 0 15245 0 0 16406 0 0 15347 0 0 17697 0 0 14651 0 0 24194 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18475000 18475000 0 0 NaN 3190 1737 1245 1245 4391 4679 4983 5530 4983 5530 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11535 4983 5530 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11535 4983 5530 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11535 Q96RL1 101 Q96RL1 Q96RL1 BRCA1-A complex subunit RAP80 UIMC1 sp|Q96RL1|UIMC1_HUMAN BRCA1-A complex subunit RAP80 OS=Homo sapiens GN=UIMC1 PE=1 SV=2 1 142.431 8.40249E-07 142.43 119.13 142.43 1 S ALALKMSEQEAREVNSQEEEEEELLRKAIAE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPXXXX EVNS(1)QEEEEEELLRK EVNS(142.43)QEEEEEELLRK 4 3 -0.91211 8533.2 0 0 10822 0 0 8969.5 0 0 10174 0 0 24884 0 0 9059.6 0 0 25254 0 0 15232 0 0 10702 0 0 31092 0 0 8076.2 0 0 10219 0 0 9202.2 0 0 10468 0 0 24304 0 0 9266.6 0 0 25290 0 0 15977 0 0 11177 0 0 29629 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18007000 18007000 0 0 NaN 3191 1738 101 101 1214 1277 1376 1527 1376 1527 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15843 1376 1527 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15843 1376 1527 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15843 Q96RL1 653 Q96RL1 Q96RL1 BRCA1-A complex subunit RAP80 UIMC1 sp|Q96RL1|UIMC1_HUMAN BRCA1-A complex subunit RAP80 OS=Homo sapiens GN=UIMC1 PE=1 SV=2 1 142.552 7.07683E-16 230.54 207.62 230.54 1 S DADIKSSETGAFRVPSPGMEEAGCSREMQSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX VPS(1)PGMEEAGCSR VPS(142.55)PGMEEAGCS(-142.55)R 3 2 -0.77558 11743 0 0 20774 0 0 12982 0 0 19051 0 0 13936 0 0 13005 0 0 14293 0 0 14761 0 0 20473 0 0 9018.9 0 0 11117 0 0 19615 0 0 13013 0 0 19569 0 0 14097 0 0 13344 0 0 14702 0 0 15010 0 0 19939 0 0 8834 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 69613000 69613000 0 0 NaN 3192 1738 653 653 5211 5555 5919 6577 5919 6577 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11493 5919 6577 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11493 5919 6577 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11493 Q96RR4 511 Q96RR4 Q96RR4 Calcium/calmodulin-dependent protein kinase kinase 2 CAMKK2 sp|Q96RR4|KKCC2_HUMAN Calcium/calmodulin-dependent protein kinase kinase 2 OS=Homo sapiens GN=CAMKK2 PE=1 SV=2 0.987988 19.1515 7.5704E-07 155.98 101.72 155.98 1 S FGNPFEGSRREERSLSAPGNLLTKKPTRECE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX S(0.012)LS(0.988)APGNLLTK S(-19.15)LS(19.15)APGNLLT(-70.7)K 3 2 0.1558 29140 0 0 8045.8 0 0 27275 0 0 8500.2 0 0 10013 0 0 26156 0 0 14313 0 0 16288 0 0 8843.7 0 0 19969 0 0 27567 0 0 7603.1 0 0 27368 0 0 8983.7 0 0 11236 0 0 25344 0 0 14213 0 0 17322 0 0 8958 0 0 19180 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24871000 24871000 0 0 NaN 3193 1739 511 511 3976 4236 4520 5023 4520 5023 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19234 4520 5023 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19234 4520 5023 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19234 Q96RU2 1053 Q96RU2 Q96RU2 Ubiquitin carboxyl-terminal hydrolase 28 USP28 sp|Q96RU2|UBP28_HUMAN Ubiquitin carboxyl-terminal hydrolase 28 OS=Homo sapiens GN=USP28 PE=1 SV=1 0.995973 27.5521 0.00312738 93.006 76.067 93.006 1 S AEIIVLKEPPTIRPNSPYDLCSRFAAVMESI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPXXXXXXXX EPPT(0.002)IRPNS(0.996)PY(0.001)DLCS(0.002)R EPPT(-28.16)IRPNS(27.55)PY(-31.19)DLCS(-27.55)R 9 3 -1.2911 8402.6 0 0 11021 0 0 8659 0 0 9644.4 0 0 16106 0 0 9107.3 0 0 16802 0 0 13221 0 0 10394 0 0 6546.4 0 0 7952 0 0 10403 0 0 8796.9 0 0 9978 0 0 15909 0 0 9216.6 0 0 16894 0 0 13299 0 0 10528 0 0 6470.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17551000 17551000 0 0 NaN 3194 1740 1053 1053 1089 1147 1235 1359 1235 1359 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13864 1235 1359 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13864 1235 1359 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13864 Q96RU3 497 Q96RU3 Q96RU3 Formin-binding protein 1 FNBP1 sp|Q96RU3|FNBP1_HUMAN Formin-binding protein 1 OS=Homo sapiens GN=FNBP1 PE=1 SV=2 0.988849 20.6426 0.0135 70.653 55.26 70.653 1 S VEGRLPARSEQARRQSGLYDSQNPPTVNNCA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RQS(0.989)GLY(0.003)DS(0.009)QNPPTVNNCAQDR RQS(20.64)GLY(-25.78)DS(-20.64)QNPPT(-51.54)VNNCAQDR 3 3 0.26866 86188 0 0 79371 0 0 84897 0 0 78548 0 0 50462 0 0 87642 0 0 57008 0 0 69933 0 0 79946 0 0 9115.5 0 0 81551 0 0 74974 0 0 85151 0 0 80847 0 0 53356 0 0 87237 0 0 58343 0 0 71109 0 0 77910 0 0 10202 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15786000 15786000 0 0 NaN 3195 1741 497 497 3421 3633 3875 4301 3875 4301 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9683 3875 4301 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9683 3875 4301 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9683 Q96RU3 296 Q96RU3 Q96RU3 Formin-binding protein 1 FNBP1 sp|Q96RU3|FNBP1_HUMAN Formin-binding protein 1 OS=Homo sapiens GN=FNBP1 PE=1 SV=2 0.973095 15.7384 0.000118634 123.75 108.21 123.75 1 S DIEFEDYTQPMKRTVSDNSLSNSRGEGKPDL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX T(0.026)VS(0.973)DNS(0.001)LSNSR T(-15.74)VS(15.74)DNS(-30.13)LS(-66.74)NS(-71.88)R 3 2 -0.72644 44556 0 0 20477 0 0 47517 0 0 19969 0 0 47022 0 0 48263 0 0 48292 0 0 40025 0 0 21759 0 0 7384.8 0 0 42173 0 0 19341 0 0 47673 0 0 20989 0 0 47740 0 0 47024 0 0 48369 0 0 40690 0 0 22595 0 0 7880 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 170920000 170920000 0 0 NaN 3196 1741 296 296 5013 5344 5694 6324 5694 6324 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8426 5694 6324 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8426 5694 6324 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8426 Q96S55 65 Q96S55 Q96S55 ATPase WRNIP1 WRNIP1 sp|Q96S55|WRIP1_HUMAN ATPase WRNIP1 OS=Homo sapiens GN=WRNIP1 PE=1 SV=2 1 60.4007 0.0162185 60.401 28.338 60.401 1 S PAAGSHRAGERAKGPSPPGAKRRRLSESSAL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX AKGPS(1)PPGAK AKGPS(60.4)PPGAK 5 3 0.085344 11595 0 0 18170 0 0 13313 0 0 16987 0 0 11767 0 0 11856 0 0 11377 0 0 14209 0 0 18713 0 0 2286.6 0 0 10978 0 0 17158 0 0 13287 0 0 17432 0 0 12034 0 0 12147 0 0 11800 0 0 14230 0 0 18153 0 0 2481.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19514000 19514000 0 0 NaN 3197 1743 65 65 267 288 309 344 309 344 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8872 309 344 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8872 309 344 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8872 Q96S55 75 Q96S55 Q96S55 ATPase WRNIP1 WRNIP1 sp|Q96S55|WRIP1_HUMAN ATPase WRNIP1 OS=Homo sapiens GN=WRNIP1 PE=1 SV=2 0.99966 35.361 5.78752E-06 154.41 64.732 154.41 1 S RAKGPSPPGAKRRRLSESSALKQPATPTAAE X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX RLS(1)ESSALK RLS(35.36)ES(-35.36)S(-43.08)ALK 3 2 -0.66972 30168 0 0 33646 0 0 30397 0 0 35272 0 0 25989 0 0 30674 0 0 24403 0 0 28737 0 0 34543 0 0 7015.9 0 0 28548 0 0 31793 0 0 30538 0 0 36043 0 0 26621 0 0 30940 0 0 25194 0 0 29112 0 0 33654 0 0 7271.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 73238000 73238000 0 0 NaN 3198 1743 75 75 3323 3525 3762 4178 3762 4178 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11644 3762 4178 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11644 3762 4178 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11644 Q96S55 153 Q96S55 Q96S55 ATPase WRNIP1 WRNIP1 sp|Q96S55|WRIP1_HUMAN ATPase WRNIP1 OS=Homo sapiens GN=WRNIP1 PE=1 SV=2 0.999999 62.031 2.95371E-10 184.59 140.17 184.59 1 S GSGKRPAAAAAAGSASPRSWDEAEAQEEEEA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPXXXXXXXXXXXXX RPAAAAAAGSAS(1)PR RPAAAAAAGS(-62.03)AS(62.03)PR 12 2 1.2819 4898.5 0 0 7353.2 0 0 5321 0 0 6929.4 0 0 3949.9 0 0 4914 0 0 3125.1 0 0 4990.2 0 0 7206.4 0 0 1037.9 0 0 4636.9 0 0 6943.9 0 0 5315.4 0 0 7108.3 0 0 4081.5 0 0 5018.4 0 0 3332.5 0 0 5033.9 0 0 6937.4 0 0 1092.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 41584000 41584000 0 0 NaN 3199 1743 153 153 3373 3580 3820 4242 3820 4242 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5778 3820 4242 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5778 3820 4242 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5778 Q96S59 467 Q96S59 Q96S59 Ran-binding protein 9 RANBP9 sp|Q96S59|RANB9_HUMAN Ran-binding protein 9 OS=Homo sapiens GN=RANBP9 PE=1 SV=1 1 79.659 0.0122098 79.659 43.715 79.659 1 S MVNGTDSEVRCLGGRSPKSQDSYPVSPRPFS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPXXXXXXXXXXXXX CLGGRS(1)PK CLGGRS(79.66)PK 6 2 -0.34478 31490 0 0 25122 0 0 30337 0 0 24044 0 0 18111 0 0 29163 0 0 21534 0 0 26352 0 0 27067 0 0 3958.3 0 0 29793 0 0 23726 0 0 30471 0 0 24835 0 0 19154 0 0 28975 0 0 21907 0 0 26661 0 0 26472 0 0 4337.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20240000 20240000 0 0 NaN 3200 1744 467 467 610 649 691 767 691 767 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7981 691 767 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7981 691 767 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7981 Q96S66 438 Q96S66 Q96S66 Chloride channel CLIC-like protein 1 CLCC1 sp|Q96S66|CLCC1_HUMAN Chloride channel CLIC-like protein 1 OS=Homo sapiens GN=CLCC1 PE=1 SV=1 0.838245 7.14513 0.00329535 91.653 45.929 91.653 1 S LRERDVDLRFQTGNKSPEVLRAFDVPDAEAR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX FQT(0.162)GNKS(0.838)PEVLR FQT(-7.15)GNKS(7.15)PEVLR 7 3 -0.57834 10079 0 0 21131 0 0 10467 0 0 22395 0 0 17637 0 0 8942.1 0 0 16939 0 0 17880 0 0 24136 0 0 2883.9 0 0 9539.1 0 0 19969 0 0 10603 0 0 22701 0 0 17472 0 0 9681 0 0 17473 0 0 17675 0 0 23510 0 0 3129.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 33621000 33621000 0 0 NaN 3201 1745 438 438 1311 1382 1488 1650 1488 1650 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13887 1488 1650 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13887 1488 1650 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13887 Q96S66 532 Q96S66 Q96S66 Chloride channel CLIC-like protein 1 CLCC1 sp|Q96S66|CLCC1_HUMAN Chloride channel CLIC-like protein 1 OS=Homo sapiens GN=CLCC1 PE=1 SV=1 0.677294 3.84718 9.91686E-05 116.35 71.78 116.35 1 S LKSEAAGSPDQGSTYSPARGVAGPRGQDPVS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPXXXXXXXXXXXX SEAAGSPDQGS(0.043)T(0.279)YS(0.677)PAR S(-106.07)EAAGS(-61.16)PDQGS(-11.93)T(-3.85)Y(-46.9)S(3.85)PAR 14 2 0.052064 1628.2 0 0 4334 0 0 1696.8 0 0 3847.1 0 0 2330.7 0 0 2101.2 0 0 1993 0 0 3267.8 0 0 4972.5 0 0 458.42 0 0 1540.9 0 0 4091.4 0 0 1711.8 0 0 3951.8 0 0 2325.8 0 0 2199.6 0 0 2126.5 0 0 3246.5 0 0 4780 0 0 507.28 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5569400 5569400 0 0 NaN 3202 1745 532 532 3679 3914 4174 4640 4174 4640 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7416 4174 4640 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7416 4174 4640 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7416 Q96S94 369 Q96S94 Q96S94 Cyclin-L2 CCNL2 sp|Q96S94|CCNL2_HUMAN Cyclin-L2 OS=Homo sapiens GN=CCNL2 PE=1 SV=1 1 123.362 5.9546E-05 130.69 88.13 123.36 1 S NTKRRLEGAKKAKADSPVNGLPKGRESRSRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX AKADS(1)PVNGLPK AKADS(123.36)PVNGLPK 5 3 -0.10809 32740 0 0 25587 0 0 31238 0 0 26184 0 0 50667 0 0 32633 0 0 47655 0 0 37010 0 0 26731 0 0 13453 0 0 30974 0 0 24174 0 0 31774 0 0 26952 0 0 50208 0 0 32502 0 0 48081 0 0 37360 0 0 27263 0 0 13524 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 45143000 45143000 0 0 NaN 3203 1746 369 369 122;263 128;284 137;305 152;339 305 339 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12546 137 152 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13324 137 152 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13324 Q96S94 330 Q96S94 Q96S94 Cyclin-L2 CCNL2 sp|Q96S94|CCNL2_HUMAN Cyclin-L2 OS=Homo sapiens GN=CCNL2 PE=1 SV=1 0.963074 14.188 1.06234E-16 235.23 219.46 235.23 1 S LLPGGTQVLDGTSGFSPAPKLVESPKEGKGS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX GLLPGGTQVLDGTS(0.037)GFS(0.963)PAPK GLLPGGT(-156.05)QVLDGT(-36.62)S(-14.19)GFS(14.19)PAPK 17 3 -0.31237 7732.8 0 0 8540 0 0 8565.7 0 0 7714.7 0 0 5417.8 0 0 7919.1 0 0 5263.2 0 0 8978.5 0 0 8540.2 0 0 19224 0 0 7320.3 0 0 8062.8 0 0 8538.5 0 0 7974.9 0 0 5684.7 0 0 7978 0 0 5454.7 0 0 9544.3 0 0 8287.6 0 0 18310 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 59899000 59899000 0 0 NaN 3204 1746 330 330 1503 1581 1709 1891 1709 1891 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21920 1709 1891 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21920 1709 1891 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21920 Q96S94 348 Q96S94 Q96S94 Cyclin-L2 CCNL2 sp|Q96S94|CCNL2_HUMAN Cyclin-L2 OS=Homo sapiens GN=CCNL2 PE=1 SV=1 0.994963 23.4211 0.00252436 93.859 69.067 93.859 1 S PKLVESPKEGKGSKPSPLSVKNTKRRLEGAK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX GS(0.005)KPS(0.995)PLS(0.001)VK GS(-23.42)KPS(23.42)PLS(-32.89)VK 5 3 0.078876 71914 0 0 54393 0 0 70245 0 0 52454 0 0 75633 0 0 65987 0 0 80298 0 0 72863 0 0 57154 0 0 4786.2 0 0 68043 0 0 51372 0 0 70903 0 0 54194 0 0 76478 0 0 65633 0 0 80878 0 0 72965 0 0 57376 0 0 6193.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 240620000 240620000 0 0 NaN 3205 1746 348 348 1616 1702 1839 2046 1839 2046 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12906 1839 2046 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12906 1839 2046 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12906 Q96SB3 100 Q96SB3 Q96SB3 Neurabin-2 PPP1R9B sp|Q96SB3|NEB2_HUMAN Neurabin-2 OS=Homo sapiens GN=PPP1R9B PE=1 SV=2 0.84999 7.53295 8.72909E-11 196.61 155.51 196.61 1 S RASERGVRLSLPRASSLNENVDHSALLKLGT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX AS(0.15)S(0.85)LNENVDHSALLK AS(-7.53)S(7.53)LNENVDHS(-84.02)ALLK 3 3 0.67233 27830 0 0 21124 0 0 27574 0 0 24382 0 0 43778 0 0 29372 0 0 47710 0 0 32066 0 0 28087 0 0 14450 0 0 26334 0 0 19974 0 0 27986 0 0 24916 0 0 43506 0 0 29279 0 0 47839 0 0 32496 0 0 28545 0 0 14349 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 92583000 92583000 0 0 NaN 3206 1747 100 100 501 532 572 638 572 638 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15178 572 638 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15178 572 638 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15178 Q96SI1 38 Q96SI1 Q96SI1 BTB/POZ domain-containing protein KCTD15 KCTD15 sp|Q96SI1|KCD15_HUMAN BTB/POZ domain-containing protein KCTD15 OS=Homo sapiens GN=KCTD15 PE=1 SV=1 0.729662 4.31214 1.57031E-05 130.34 111.02 130.34 1 S EGGNMSRLSLTRSPVSPLAAQGIPLPAQLTK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP S(0.27)PVS(0.73)PLAAQGIPLPAQLTK S(-4.31)PVS(4.31)PLAAQGIPLPAQLT(-121.13)K 4 3 -0.56933 14950 0 0 15787 0 0 18348 0 0 14539 0 0 16341 0 0 14434 0 0 14855 0 0 16168 0 0 18004 0 0 27690 0 0 14159 0 0 14907 0 0 18253 0 0 15003 0 0 16684 0 0 14547 0 0 15279 0 0 16985 0 0 17631 0 0 26448 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 59069000 59069000 0 0 NaN 3207 1749 38 38 4210 4487 4781 5307 4781 5307 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23318 4781 5307 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23318 4781 5307 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23318 Q96SN8 1887 Q96SN8 Q96SN8 CDK5 regulatory subunit-associated protein 2 CDK5RAP2 sp|Q96SN8|CK5P2_HUMAN CDK5 regulatory subunit-associated protein 2 OS=Homo sapiens GN=CDK5RAP2 PE=1 SV=5 0.48852 0 0.0241011 80.984 66.826 80.984 S GNLELRPGGAHPGTCSPSRPGS_________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GNLELRPGGAHPGT(0.489)CS(0.489)PS(0.022)RPGS(0.001) GNLELRPGGAHPGT(0)CS(0)PS(-13.52)RPGS(-25.94) 16 3 -0.84197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3208 1750 1887 1887 1530 1611 1740 1933 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9843 1740 1933 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9843 1740 1933 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9843 Q96ST2 235 Q96ST2 Q96ST2 Protein IWS1 homolog IWS1 sp|Q96ST2|IWS1_HUMAN Protein IWS1 homolog OS=Homo sapiens GN=IWS1 PE=1 SV=2 1 81.0171 0.00851995 81.017 65.043 81.017 2 S QVSDSESEEPPRHQASDSENEELPKPRISDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPXXXX HQAS(1)DS(1)ENEELPKPR HQAS(81.02)DS(81.02)ENEELPKPR 4 3 0.37716 0 10910 0 0 11901 0 0 12330 0 0 11730 0 0 15512 0 0 12095 0 0 15253 0 0 15003 0 0 12137 0 0 24560 0 0 10329 0 0 11241 0 0 12372 0 0 12061 0 0 15547 0 0 12190 0 0 15453 0 0 15677 0 0 12107 0 0 23473 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 11799000 0 11799000 0 NaN 3209 1751 235 235 1735 1829 1974 2200 1974 2200 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9703 1974 2200 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9703 1974 2200 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9703 Q96ST2 237 Q96ST2 Q96ST2 Protein IWS1 homolog IWS1 sp|Q96ST2|IWS1_HUMAN Protein IWS1 homolog OS=Homo sapiens GN=IWS1 PE=1 SV=2 1 81.0171 0.00851995 81.017 65.043 81.017 2 S SDSESEEPPRHQASDSENEELPKPRISDSES X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPXXXXXX HQAS(1)DS(1)ENEELPKPR HQAS(81.02)DS(81.02)ENEELPKPR 6 3 0.37716 0 10910 0 0 11901 0 0 12330 0 0 11730 0 0 15512 0 0 12095 0 0 15253 0 0 15003 0 0 12137 0 0 24560 0 0 10329 0 0 11241 0 0 12372 0 0 12061 0 0 15547 0 0 12190 0 0 15453 0 0 15677 0 0 12107 0 0 23473 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 11799000 0 11799000 0 NaN 3210 1751 237 237 1735 1829 1974 2200 1974 2200 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9703 1974 2200 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9703 1974 2200 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9703 Q96ST2 248 Q96ST2 Q96ST2 Protein IWS1 homolog IWS1 sp|Q96ST2|IWS1_HUMAN Protein IWS1 homolog OS=Homo sapiens GN=IWS1 PE=1 SV=2 0.905518 9.83461 5.15259E-07 162.38 117.31 162.38 1 S QASDSENEELPKPRISDSESEDPPRHQASDS X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPXXXXXX IS(0.906)DS(0.094)ESEDPPR IS(9.83)DS(-9.83)ES(-33.38)EDPPR 2 2 -0.055408 18792 0 0 14443 0 0 17662 0 0 14389 0 0 11640 0 0 19546 0 0 13103 0 0 14913 0 0 14806 0 0 4837.2 0 0 17777 0 0 13644 0 0 17779 0 0 14860 0 0 12190 0 0 19313 0 0 13314 0 0 15284 0 0 14537 0 0 4899.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24147000 24147000 0 0 NaN 3211 1751 248 248 1935 2043 2205 2465 2205 2465 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9044 2205 2465 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9044 2205 2465 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9044 Q96ST2 720 Q96ST2 Q96ST2 Protein IWS1 homolog IWS1 sp|Q96ST2|IWS1_HUMAN Protein IWS1 homolog OS=Homo sapiens GN=IWS1 PE=1 SV=2 0.794389 5.97201 0.0502474 53.034 38.615 53.034 1 S EQRDLEQMPQRRRMNSTGGQTPRRDLEKVLT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX RMNS(0.794)T(0.201)GGQT(0.005)PR RMNS(5.97)T(-5.97)GGQT(-22.21)PR 4 2 -0.37868 2712.1 0 0 1082.8 0 0 2763.7 0 0 1497.5 0 0 1941.4 0 0 3015.8 0 0 1737.4 0 0 1940.6 0 0 1130.6 0 0 1164.6 0 0 2566.5 0 0 1025.3 0 0 2769.5 0 0 1536.7 0 0 2015.3 0 0 2943.8 0 0 1761.7 0 0 2023.3 0 0 1141.3 0 0 1141.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 3716000 3716000 0 0 NaN 3212 1751 720 720 3355 3557 3795 4213 3795 4213 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5488 3795 4213 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5488 3795 4213 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5488 Q96ST2 300 Q96ST2 Q96ST2 Protein IWS1 homolog IWS1 sp|Q96ST2|IWS1_HUMAN Protein IWS1 homolog OS=Homo sapiens GN=IWS1 PE=1 SV=2 0.946541 12.7587 1.30825E-06 141.37 76.641 141.37 1 S QASDSENEELPKPRVSDSESEGPQKGPASDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPXXXXXX VS(0.947)DS(0.05)ES(0.003)EGPQK VS(12.76)DS(-12.76)ES(-24.56)EGPQK 2 2 1.3067 10951 0 0 11299 0 0 11872 0 0 12000 0 0 11092 0 0 9983.8 0 0 11262 0 0 11666 0 0 12294 0 0 7077.7 0 0 10366 0 0 10677 0 0 11892 0 0 12246 0 0 11306 0 0 10132 0 0 11484 0 0 11849 0 0 12086 0 0 6934.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8832800 8832800 0 0 NaN 3213 1751 300 300 5242 5587 5955 6619 5955 6619 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9214 5955 6619 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9214 5955 6619 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9214 Q96ST3 1112 Q96ST3 Q96ST3 Paired amphipathic helix protein Sin3a SIN3A sp|Q96ST3|SIN3A_HUMAN Paired amphipathic helix protein Sin3a OS=Homo sapiens GN=SIN3A PE=1 SV=2 0.996535 24.606 3.36653E-11 203.93 166.82 203.93 1 S RWSDYVERYMNSDTTSPELREHLAQKPVFLP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX YMNSDTT(0.003)S(0.997)PELR Y(-135.45)MNS(-76.67)DT(-48.29)T(-24.61)S(24.61)PELR 8 2 -0.056727 43175 0 0 46632 0 0 42787 0 0 42782 0 0 42223 0 0 48326 0 0 52279 0 0 50596 0 0 47411 0 0 16538 0 0 40853 0 0 44029 0 0 43118 0 0 44251 0 0 43019 0 0 48252 0 0 52599 0 0 51161 0 0 46986 0 0 16743 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 62547000 62547000 0 0 NaN 3214 1752 1112 1112 5400 5752 6139 6826 6139 6826 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12521 6139 6826 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12521 6139 6826 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12521 Q96T23 604 Q96T23 Q96T23 Remodeling and spacing factor 1 RSF1 sp|Q96T23|RSF1_HUMAN Remodeling and spacing factor 1 OS=Homo sapiens GN=RSF1 PE=1 SV=2 1 142.085 9.53809E-08 158.97 133.56 142.08 1 S EKSKKTFLDKDAQRLSPIPEEVPKSTLESEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPXXXXXXX LS(1)PIPEEVPK LS(142.08)PIPEEVPK 2 2 -0.56842 70319 0 0 101870 0 0 81205 0 0 107520 0 0 125860 0 0 72267 0 0 129940 0 0 102870 0 0 116840 0 0 122790 0 0 66580 0 0 96270 0 0 81697 0 0 109490 0 0 125130 0 0 74625 0 0 131720 0 0 105700 0 0 115850 0 0 118000 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 189980000 189980000 0 0 NaN 3215 1754 604 604 641;2574;4704 683;2718;5015 728;2916;5342 808;3250;5937 2916 3250 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18284 5342 5937 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18807 5342 5937 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18807 Q96T23 473 Q96T23 Q96T23 Remodeling and spacing factor 1 RSF1 sp|Q96T23|RSF1_HUMAN Remodeling and spacing factor 1 OS=Homo sapiens GN=RSF1 PE=1 SV=2 0.956206 15.4441 0.00100367 115.23 74.238 115.23 1 S EPIETKFYETKEESYSPSKDRNIITEGNGTE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX EES(0.027)YS(0.956)PS(0.016)K EES(-15.44)Y(-48.78)S(15.44)PS(-17.64)K 5 2 1.1059 20337 0 0 27554 0 0 21653 0 0 27398 0 0 27761 0 0 21755 0 0 28905 0 0 26167 0 0 28460 0 0 11636 0 0 19249 0 0 26029 0 0 21804 0 0 28050 0 0 27827 0 0 22135 0 0 29356 0 0 26427 0 0 28100 0 0 11562 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 24043000 24043000 0 0 NaN 3216 1754 473 473 936;937 990;991 1074;1075 1186;1187 1074 1186 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9036 1074 1186 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9036 1074 1186 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9036 Q96T23 570 Q96T23 Q96T23 Remodeling and spacing factor 1 RSF1 sp|Q96T23|RSF1_HUMAN Remodeling and spacing factor 1 OS=Homo sapiens GN=RSF1 PE=1 SV=2 1 71.2212 0.0117958 71.221 16.682 71.221 1 S ALSSTESCTMKGEEKSPKTKKDKRPPILECL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX GEEKS(1)PK GEEKS(71.22)PK 5 3 -0.1506 14106 0 0 18545 0 0 14471 0 0 19788 0 0 14485 0 0 14518 0 0 14559 0 0 16042 0 0 19463 0 0 2600.2 0 0 13350 0 0 17526 0 0 14551 0 0 20157 0 0 14705 0 0 14812 0 0 14950 0 0 16111 0 0 18996 0 0 2819.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14816000 14816000 0 0 NaN 3217 1754 570 570 1405 1481 1590 1758 1590 1758 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6899 1590 1758 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6899 1590 1758 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6899 Q96T23 1375 Q96T23 Q96T23 Remodeling and spacing factor 1 RSF1 sp|Q96T23|RSF1_HUMAN Remodeling and spacing factor 1 OS=Homo sapiens GN=RSF1 PE=1 SV=2 0.673946 6.16467 0.0157207 63.115 38.093 63.115 1 S PLDYSLVDLPSTNGQSPGKAIENLIGKPTEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX VGSPLDYSLVDLPS(0.163)T(0.163)NGQS(0.674)PGK VGS(-52.6)PLDY(-47.61)S(-40.4)LVDLPS(-6.16)T(-6.16)NGQS(6.16)PGK 19 3 0.74818 7257.8 0 0 10413 0 0 7637.2 0 0 6353.2 0 0 8003 0 0 7489.1 0 0 9978.5 0 0 11104 0 0 9659.2 0 0 57475 0 0 6869.1 0 0 9813.6 0 0 7676.6 0 0 6789.3 0 0 8127.5 0 0 7609.5 0 0 10054 0 0 12729 0 0 9544.3 0 0 54376 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17907000 17907000 0 0 NaN 3218 1754 1375 1375 5123 5460 5816 6467 5816 6467 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23053 5816 6467 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23053 5816 6467 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23053 Q96T37 622 Q96T37 Q96T37 Putative RNA-binding protein 15 RBM15 sp|Q96T37|RBM15_HUMAN Putative RNA-binding protein 15 OS=Homo sapiens GN=RBM15 PE=1 SV=2 1 66.2987 0.022802 66.299 32.093 66.299 1 S AYEPLDSLDRRRDGWSLDRDRGDRDLPSSRD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX DGWS(1)LDR DGWS(66.3)LDR 4 2 -0.078465 13028 0 0 12410 0 0 14942 0 0 13301 0 0 12712 0 0 15793 0 0 11953 0 0 14095 0 0 13441 0 0 4577.2 0 0 12335 0 0 11729 0 0 14907 0 0 13643 0 0 13022 0 0 15706 0 0 12244 0 0 14342 0 0 13199 0 0 4636.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28288000 28288000 0 0 NaN 3219 1755 622 622 693 737 787 869 787 869 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14496 787 869 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14496 787 869 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14496 Q96T37 109 Q96T37 Q96T37 Putative RNA-binding protein 15 RBM15 sp|Q96T37|RBM15_HUMAN Putative RNA-binding protein 15 OS=Homo sapiens GN=RBM15 PE=1 SV=2 0.999995 53.3027 8.76991E-05 113.63 88.753 113.63 1 S SRRSLHLDKSSSRGGSREYDTGGGSSSSRLH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX GGS(1)REYDTGGGSSSSR GGS(53.3)REY(-74.38)DT(-53.3)GGGS(-72.94)S(-76.06)S(-87.72)S(-99.77)R 3 3 0.1041 2443.4 0 0 3746.8 0 0 3432 0 0 3906.2 0 0 3208.9 0 0 3116.7 0 0 4279.4 0 0 3946.6 0 0 3861.8 0 0 1464.1 0 0 2315.8 0 0 3540.4 0 0 3398.3 0 0 3988.3 0 0 3284.3 0 0 3172.4 0 0 4293.2 0 0 3970.7 0 0 3828.2 0 0 1470 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10094000 10094000 0 0 NaN 3220 1755 109 109 1455 1532 1654 1834 1654 1834 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5312 1654 1834 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5312 1654 1834 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5312 Q96T37 670 Q96T37 Q96T37 Putative RNA-binding protein 15 RBM15 sp|Q96T37|RBM15_HUMAN Putative RNA-binding protein 15 OS=Homo sapiens GN=RBM15 PE=1 SV=2 0.99997 46.7516 0.000392806 100.76 89.892 100.76 2 S RSPESDRPRKRHCAPSPDRSPELSSSRDRYN X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPXXXX HCAPS(1)PDRS(0.995)PELS(0.004)S(0.001)SR HCAPS(46.75)PDRS(23.95)PELS(-23.95)S(-30.06)S(-36.01)R 5 3 0.16019 0 14573 0 0 12710 0 0 14948 0 0 12228 0 0 11271 0 0 13553 0 0 13439 0 0 12854 0 0 14265 0 0 6138.7 0 0 13791 0 0 12004 0 0 14990 0 0 12606 0 0 11686 0 0 13528 0 0 13598 0 0 13105 0 0 14040 0 0 6077.8 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 23878000 0 23878000 0 NaN 3221 1755 670 670 1700 1793 1937 2158;2159 1937 2159 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6854 1937 2159 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6854 1937 2159 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6854 Q96T37 674 Q96T37 Q96T37 Putative RNA-binding protein 15 RBM15 sp|Q96T37|RBM15_HUMAN Putative RNA-binding protein 15 OS=Homo sapiens GN=RBM15 PE=1 SV=2 0.994765 23.953 0.000392806 100.76 89.892 100.76 2 S SDRPRKRHCAPSPDRSPELSSSRDRYNSDND X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPXXXXXXXX HCAPS(1)PDRS(0.995)PELS(0.004)S(0.001)SR HCAPS(46.75)PDRS(23.95)PELS(-23.95)S(-30.06)S(-36.01)R 9 3 0.16019 0 14573 0 0 12710 0 0 14948 0 0 12228 0 0 11271 0 0 13553 0 0 13439 0 0 12854 0 0 14265 0 0 6138.7 0 0 13791 0 0 12004 0 0 14990 0 0 12606 0 0 11686 0 0 13528 0 0 13598 0 0 13105 0 0 14040 0 0 6077.8 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 23878000 0 23878000 0 NaN 3222 1755 674 674 1700 1793 1937 2158;2159 1937 2159 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6854 1937 2159 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6854 1937 2159 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6854 Q96T37 656 Q96T37 Q96T37 Putative RNA-binding protein 15 RBM15 sp|Q96T37|RBM15_HUMAN Putative RNA-binding protein 15 OS=Homo sapiens GN=RBM15 PE=1 SV=2 0.999997 54.9499 3.75534E-07 141.36 117.53 141.36 1 S KRRLPEESGGRHLDRSPESDRPRKRHCAPSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX HLDRS(1)PESDRPR HLDRS(54.95)PES(-54.95)DRPR 5 4 -0.53106 10541 0 0 12708 0 0 9512 0 0 11390 0 0 10923 0 0 12058 0 0 12791 0 0 11524 0 0 11762 0 0 1866.4 0 0 9970.6 0 0 11998 0 0 9658 0 0 11786 0 0 11027 0 0 12053 0 0 12902 0 0 11636 0 0 11649 0 0 2024.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 120710000 120710000 0 0 NaN 3223 1755 656 656 1723 1817 1962 2187 1962 2187 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5490 1962 2187 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5490 1962 2187 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5490 Q96T37 722 Q96T37 Q96T37 Putative RNA-binding protein 15 RBM15 sp|Q96T37|RBM15_HUMAN Putative RNA-binding protein 15 OS=Homo sapiens GN=RBM15 PE=1 SV=2 0.946894 12.5116 0.0193608 72.817 41.706 72.817 1 S GSLEKSQGDKRDRKNSASAERDRKHRTTAPT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX KNS(0.947)AS(0.053)AER KNS(12.51)AS(-12.51)AER 3 2 -0.65718 5976.4 0 0 5288.4 0 0 4739.6 0 0 4588.8 0 0 4355.4 0 0 6310.6 0 0 4617.1 0 0 4176 0 0 5819.2 0 0 1303.4 0 0 5650.5 0 0 4991.8 0 0 4839.4 0 0 4782 0 0 4447.4 0 0 6224.3 0 0 4720.2 0 0 4310.9 0 0 5690.8 0 0 1324 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11369000 11369000 0 0 NaN 3224 1755 722 722 2146 2268 2442 2719 2442 2719 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5346 2442 2719 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5346 2442 2719 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5346 Q96T37 765 Q96T37 Q96T37 Putative RNA-binding protein 15 RBM15 sp|Q96T37|RBM15_HUMAN Putative RNA-binding protein 15 OS=Homo sapiens GN=RBM15 PE=1 SV=2 0.972814 15.5368 0.019383 68.626 10.841 68.626 1 S DGSAPSTSTASSKLKSPSQKQDGGTAPVASA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX LKS(0.973)PS(0.027)QK LKS(15.54)PS(-15.54)QK 3 2 -0.025105 26398 0 0 28124 0 0 26715 0 0 29117 0 0 22845 0 0 25467 0 0 23103 0 0 27265 0 0 29490 0 0 8155 0 0 24981 0 0 26573 0 0 26835 0 0 29777 0 0 23422 0 0 25727 0 0 23680 0 0 27524 0 0 28827 0 0 8309.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15003000 15003000 0 0 NaN 3225 1755 765 765 2421 2559 2753 3075 2753 3075 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9870 2753 3075 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9870 2753 3075 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9870 Q96T37 700 Q96T37 Q96T37 Putative RNA-binding protein 15 RBM15 sp|Q96T37|RBM15_HUMAN Putative RNA-binding protein 15 OS=Homo sapiens GN=RBM15 PE=1 SV=2 1 127.297 1.19228E-06 157.33 112.18 127.3 1 S NSDNDRSSRLLLERPSPIRDRRGSLEKSQGD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX LLLERPS(1)PIRDR LLLERPS(127.3)PIRDR 7 3 -0.068776 30967 0 0 37011 0 0 31569 0 0 33949 0 0 31272 0 0 33600 0 0 31116 0 0 35431 0 0 36399 0 0 5564.7 0 0 29305 0 0 34946 0 0 31750 0 0 35039 0 0 31755 0 0 33728 0 0 31825 0 0 35636 0 0 35691 0 0 6059.8 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 594160000 594160000 0 0 NaN 3226 1755 700 700 2440;2441 2578;2579 2772;2773 3095;3096 2773 3096 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15127 2772 3095 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17276 2772 3095 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17276 Q96T37 294 Q96T37 Q96T37 Putative RNA-binding protein 15 RBM15 sp|Q96T37|RBM15_HUMAN Putative RNA-binding protein 15 OS=Homo sapiens GN=RBM15 PE=1 SV=2 0.96913 14.9684 8.85809E-23 267.93 179.77 267.93 1 S GHRHPPGGGGGQRSLSPGGAALGYRDYRLQQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX S(0.031)LS(0.969)PGGAALGYR S(-14.97)LS(14.97)PGGAALGY(-169.69)R 3 2 -0.28368 25379 0 0 27760 0 0 25725 0 0 27832 0 0 19338 0 0 24190 0 0 20498 0 0 23908 0 0 27690 0 0 7952.7 0 0 24016 0 0 26224 0 0 25808 0 0 28514 0 0 20025 0 0 24421 0 0 21006 0 0 24232 0 0 27017 0 0 8041.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 807280000 807280000 0 0 NaN 3227 1755 294 294 3991 4255 4542 5050 4542 5050 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14839 4542 5050 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14839 4542 5050 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14839 Q96T37 741 Q96T37 Q96T37 Putative RNA-binding protein 15 RBM15 sp|Q96T37|RBM15_HUMAN Putative RNA-binding protein 15 OS=Homo sapiens GN=RBM15 PE=1 SV=2 0.980157 17.0071 0.0101835 70.41 41.454 70.41 1 S ERDRKHRTTAPTEGKSPLKKEDRSDGSAPST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPXXXXXXXXXXXX TTAPT(0.02)EGKS(0.98)PLK T(-43.98)T(-35.46)APT(-17.01)EGKS(17.01)PLK 9 3 0.99388 21536 0 0 21945 0 0 20288 0 0 21039 0 0 18201 0 0 21996 0 0 19486 0 0 22279 0 0 20840 0 0 19738 0 0 20374 0 0 20725 0 0 20478 0 0 21673 0 0 18613 0 0 22046 0 0 19810 0 0 22932 0 0 20505 0 0 19101 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15071000 15071000 0 0 NaN 3228 1755 741 741 4974 5303 5650 6279 5650 6279 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11169 5650 6279 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11169 5650 6279 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11169 Q96T58 847 Q96T58 Q96T58 Msx2-interacting protein SPEN sp|Q96T58|MINT_HUMAN Msx2-interacting protein OS=Homo sapiens GN=SPEN PE=1 SV=1 1 60.4896 0.0174264 60.49 37.114 60.49 1 S SSQSSETDQENEREQSPEKPRSCNKLSREKA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX EQS(1)PEKPR EQS(60.49)PEKPR 3 3 -0.40254 9740.5 0 0 10327 0 0 9205.3 0 0 10025 0 0 11345 0 0 10075 0 0 10244 0 0 10552 0 0 13193 0 0 3394.1 0 0 9215 0 0 9754 0 0 9324.1 0 0 10312 0 0 11374 0 0 10109 0 0 10561 0 0 10669 0 0 12893 0 0 3440.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9108300 9108300 0 0 NaN 3229 1756 847 847 1104 1162 1250 1374 1250 1374 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6348 1250 1374 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6348 1250 1374 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6348 Q96T58 1287 Q96T58 Q96T58 Msx2-interacting protein SPEN sp|Q96T58|MINT_HUMAN Msx2-interacting protein OS=Homo sapiens GN=SPEN PE=1 SV=1 0.993246 21.6749 0.0110459 65.219 32.721 65.219 1 S DEDPIGSPRLLSVKGSPKVDEKVLPYSNITV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX LLS(0.007)VKGS(0.993)PK LLS(-21.67)VKGS(21.67)PK 7 3 -0.44229 19594 0 0 16001 0 0 19310 0 0 15798 0 0 22693 0 0 19330 0 0 21543 0 0 19629 0 0 16837 0 0 2302.2 0 0 18540 0 0 15115 0 0 19499 0 0 16290 0 0 22809 0 0 19226 0 0 21855 0 0 19748 0 0 16813 0 0 2622.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30221000 30221000 0 0 NaN 3230 1756 1287 1287 2465 2603 2797 3124 2797 3124 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15818 2797 3124 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15818 2797 3124 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15818 Q96T58 1062 Q96T58 Q96T58 Msx2-interacting protein SPEN sp|Q96T58|MINT_HUMAN Msx2-interacting protein OS=Homo sapiens GN=SPEN PE=1 SV=1 0.99937 32.003 3.76673E-08 157.43 128.78 65.232 1 S RESKKIKLDRLNTVASPKDCQELASISVGSG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP LNT(0.001)VAS(0.999)PK LNT(-32)VAS(32)PK 6 2 0.39332 36534 0 0 34388 0 0 37101 0 0 34430 0 0 32281 0 0 39138 0 0 33718 0 0 36869 0 0 34736 0 0 91497 0 0 34572 0 0 32485 0 0 37269 0 0 35424 0 0 33065 0 0 39163 0 0 34281 0 0 39827 0 0 34231 0 0 87009 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 39605000 39605000 0 0 NaN 3231 1756 1062 1062 2489;2490;2491 2628;2629;2630 2822;2823;2824 3149;3150;3151 2822 3149 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12497 2823 3150 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17388 2823 3150 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17388 Q96T58 749 Q96T58 Q96T58 Msx2-interacting protein SPEN sp|Q96T58|MINT_HUMAN Msx2-interacting protein OS=Homo sapiens GN=SPEN PE=1 SV=1 0.954979 13.2658 0.0358005 58.246 6.2972 58.246 1 S PQSPGASPSQAERLPSDSERRLYSRSSDRSG X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX LPS(0.955)DS(0.045)ER LPS(13.27)DS(-13.27)ER 3 2 -0.76844 18311 0 0 15011 0 0 17969 0 0 16398 0 0 19879 0 0 20163 0 0 19773 0 0 17382 0 0 15629 0 0 3648 0 0 17325 0 0 14188 0 0 18137 0 0 16812 0 0 20055 0 0 20014 0 0 20019 0 0 17653 0 0 15596 0 0 3837.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16621000 16621000 0 0 NaN 3232 1756 749 749 2507 2648 2843 3171 2843 3171 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9141 2843 3171 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9141 2843 3171 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9141 Q96T58 2101 Q96T58 Q96T58 Msx2-interacting protein SPEN sp|Q96T58|MINT_HUMAN Msx2-interacting protein OS=Homo sapiens GN=SPEN PE=1 SV=1 1 48.6592 0.0518653 48.659 21.178 48.659 1 S AVDKSASLKNVDAAVSPRGAAAQAGERESGV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX NVDAAVS(1)PR NVDAAVS(48.66)PR 7 2 0.33806 18391 0 0 17086 0 0 15803 0 0 15824 0 0 14827 0 0 17269 0 0 13768 0 0 16887 0 0 16780 0 0 2963.2 0 0 17393 0 0 16133 0 0 16048 0 0 16347 0 0 15092 0 0 17246 0 0 14148 0 0 17043 0 0 16429 0 0 3181 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12173000 12173000 0 0 NaN 3233 1756 2101 2101 2955 3134 3356 3721 3356 3721 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8540 3356 3721 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8540 3356 3721 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8540 Q96T58 3466 Q96T58 Q96T58 Msx2-interacting protein SPEN sp|Q96T58|MINT_HUMAN Msx2-interacting protein OS=Homo sapiens GN=SPEN PE=1 SV=1 0.593197 1.66916 6.69556E-05 113.64 88.962 113.64 1 S TAPKQPLFVPTTSGPSTPPGLVLPHTEFQPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPPPPPPPPP QPLFVPTTS(0.003)GPS(0.593)T(0.404)PPGLVLPHTEFQPAPK QPLFVPT(-40.43)T(-35.34)S(-23.47)GPS(1.67)T(-1.67)PPGLVLPHT(-63.26)EFQPAPK 12 4 0.37353 5919 0 0 7977.5 0 0 8965 0 0 8102.1 0 0 5571 0 0 6892.7 0 0 6559.6 0 0 6651.9 0 0 7860.4 0 0 28504 0 0 5612.3 0 0 7536.8 0 0 8812.4 0 0 8291.9 0 0 5869.1 0 0 7013.5 0 0 6665.2 0 0 7540.6 0 0 7700.6 0 0 26994 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22053000 22053000 0 0 NaN 3234 1756 3466 3466 3100 3288 3518 3900 3518 3900 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23007 3518 3900 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23007 3518 3900 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23007 Q96T58 623 Q96T58 Q96T58 Msx2-interacting protein SPEN sp|Q96T58|MINT_HUMAN Msx2-interacting protein OS=Homo sapiens GN=SPEN PE=1 SV=1 0.999965 45.3983 0.0269265 55.186 41.44 55.186 1 S DFYEMLAERREERRASYDYNQDRTYYESVRT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX RAS(1)YDYNQDR RAS(45.4)Y(-45.4)DY(-52.15)NQDR 3 3 0.71115 8353.8 0 0 9864.4 0 0 9724 0 0 7123.9 0 0 7663.6 0 0 9728.7 0 0 8900.6 0 0 7994.4 0 0 8155.6 0 0 3181.7 0 0 7910 0 0 9303 0 0 9689.9 0 0 7523.7 0 0 7915.5 0 0 9619.5 0 0 8980.3 0 0 8182.1 0 0 8078.8 0 0 3181 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5027900 5027900 0 0 NaN 3235 1756 623 623 3204 3398 3632 4028 3632 4028 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6735 3632 4028 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6735 3632 4028 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6735 Q96T58 736 Q96T58 Q96T58 Msx2-interacting protein SPEN sp|Q96T58|MINT_HUMAN Msx2-interacting protein OS=Homo sapiens GN=SPEN PE=1 SV=1 0.99999 46.9145 0.00414125 88.983 67.11 88.983 2 S PIERSQSPVHLRRPQSPGASPSQAERLPSDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX RPQS(1)PGAS(0.498)PS(0.502)QAER RPQS(46.91)PGAS(-0.03)PS(0.03)QAER 4 3 0.3968 0 3483.8 0 0 3825.4 0 0 2924 0 0 3575.4 0 0 3461 0 0 3295.3 0 0 3884.8 0 0 3459.2 0 0 4174.6 0 0 2183.2 0 0 3294.4 0 0 3612.3 0 0 2983.9 0 0 3681.9 0 0 3486.8 0 0 3321.7 0 0 3941.9 0 0 3529.2 0 0 4106.8 0 0 2135.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 11917000 0 11917000 0 NaN 3236 1756 736 736 3402 3614 3855 4280 3855 4280 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5808 3855 4280 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5808 3855 4280 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5808 Q96T58 742 Q96T58 Q96T58 Msx2-interacting protein SPEN sp|Q96T58|MINT_HUMAN Msx2-interacting protein OS=Homo sapiens GN=SPEN PE=1 SV=1 0.50181 0.0313595 0.00414125 88.983 67.11 88.983 2 S SPVHLRRPQSPGASPSQAERLPSDSERRLYS X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPXXXXXXXXXXX RPQS(1)PGAS(0.498)PS(0.502)QAER RPQS(46.91)PGAS(-0.03)PS(0.03)QAER 10 3 0.3968 0 3483.8 0 0 3825.4 0 0 2924 0 0 3575.4 0 0 3461 0 0 3295.3 0 0 3884.8 0 0 3459.2 0 0 4174.6 0 0 2183.2 0 0 3294.4 0 0 3612.3 0 0 2983.9 0 0 3681.9 0 0 3486.8 0 0 3321.7 0 0 3941.9 0 0 3529.2 0 0 4106.8 0 0 2135.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 11917000 0 11917000 0 NaN 3237 1756 742 742 3402 3614 3855 4280 3855 4280 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5808 3855 4280 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5808 3855 4280 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5808 Q96T58 1855 Q96T58 Q96T58 Msx2-interacting protein SPEN sp|Q96T58|MINT_HUMAN Msx2-interacting protein OS=Homo sapiens GN=SPEN PE=1 SV=1 0.5 0 0.009616 70.332 42.163 70.332 1 S VTRKSERIDREKLKRSNSPRGEAQKLLELKM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPXXXXXX S(0.5)NS(0.5)PRGEAQK S(0)NS(0)PRGEAQK 1 3 -3.2551 9443.4 0 0 5399.4 0 0 9831.6 0 0 6324.3 0 0 10909 0 0 10353 0 0 10275 0 0 9011.8 0 0 5819 0 0 2578.3 0 0 8937.3 0 0 5105.9 0 0 9889.5 0 0 6501.9 0 0 10994 0 0 10185 0 0 10367 0 0 9169.1 0 0 5930.6 0 0 2636.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16701000 16701000 0 0 NaN 3238 1756 1855 1855 4063 4333 4623 5136 4623 5136 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5729 4623 5136 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5729 4623 5136 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5729 Q96T58 1857 Q96T58 Q96T58 Msx2-interacting protein SPEN sp|Q96T58|MINT_HUMAN Msx2-interacting protein OS=Homo sapiens GN=SPEN PE=1 SV=1 0.5 0 0.009616 70.332 42.163 70.332 1 S RKSERIDREKLKRSNSPRGEAQKLLELKMEA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.5)NS(0.5)PRGEAQK S(0)NS(0)PRGEAQK 3 3 -3.2551 9443.4 0 0 5399.4 0 0 9831.6 0 0 6324.3 0 0 10909 0 0 10353 0 0 10275 0 0 9011.8 0 0 5819 0 0 2578.3 0 0 8937.3 0 0 5105.9 0 0 9889.5 0 0 6501.9 0 0 10994 0 0 10185 0 0 10367 0 0 9169.1 0 0 5930.6 0 0 2636.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16701000 16701000 0 0 NaN 3239 1756 1857 1857 4063 4333 4623 5136 4623 5136 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5729 4623 5136 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5729 4623 5136 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5729 Q96T58 190 Q96T58 Q96T58 Msx2-interacting protein SPEN sp|Q96T58|MINT_HUMAN Msx2-interacting protein OS=Homo sapiens GN=SPEN PE=1 SV=1 0.79813 5.97001 0.00706413 81.346 40.545 81.346 1 S ERTLQHGLYYASRSRSPNRFDAHDPRYEPRA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX S(0.202)RS(0.798)PNRFDAHDPR S(-5.97)RS(5.97)PNRFDAHDPR 3 4 -0.013769 6798.9 0 0 4779.3 0 0 6170 0 0 5899.8 0 0 8094.6 0 0 7107.1 0 0 9573.7 0 0 8152.6 0 0 5235.6 0 0 2168.2 0 0 6431.1 0 0 4521.2 0 0 6275.4 0 0 6008.7 0 0 8117.6 0 0 7087.1 0 0 9555.4 0 0 8202.5 0 0 5350 0 0 2230.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15043000 15043000 0 0 NaN 3240 1756 190 190 4296 4580 4880 5417 4880 5417 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5703 4880 5417 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5703 4880 5417 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5703 Q96T76 1030 Q96T76 Q96T76 MMS19 nucleotide excision repair protein homolog MMS19 sp|Q96T76|MMS19_HUMAN MMS19 nucleotide excision repair protein homolog OS=Homo sapiens GN=MMS19 PE=1 SV=2 0.643779 2.57018 0.000245998 107.51 99.36 107.51 1 S AVSARGEWFLLGSPGS_______________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPXXXXXXXXXXXXXXX GEWFLLGS(0.356)PGS(0.644) GEWFLLGS(-2.57)PGS(2.57) 11 2 0.914 4480.5 0 0 3801.8 0 0 4742 0 0 3825.4 0 0 3729.8 0 0 4215.1 0 0 3199.8 0 0 5278.2 0 0 4324.3 0 0 14341 0 0 4240.6 0 0 3591.6 0 0 4746.5 0 0 3932.7 0 0 3838.4 0 0 4247.9 0 0 3313.4 0 0 5685.4 0 0 4219.1 0 0 13626 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 3824000 3824000 0 0 NaN 3241 1757 1030 1030 1414 1491 1600 1770 1600 1770 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24297 1600 1770 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24297 1600 1770 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24297 Q96T88 287 Q96T88 Q96T88 E3 ubiquitin-protein ligase UHRF1 UHRF1 sp|Q96T88|UHRF1_HUMAN E3 ubiquitin-protein ligase UHRF1 OS=Homo sapiens GN=UHRF1 PE=1 SV=1 1 158.99 2.74663E-07 158.99 142.31 158.99 1 S IFVDEVFKIERPGEGSPMVDNPMRRKSGPSC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPXXXXXXX IERPGEGS(1)PMVDNPMR IERPGEGS(158.99)PMVDNPMR 8 3 -0.023414 20442 0 0 17054 0 0 20425 0 0 17046 0 0 11129 0 0 23141 0 0 11254 0 0 16987 0 0 14710 0 0 7014.5 0 0 19343 0 0 16111 0 0 20454 0 0 17601 0 0 11847 0 0 22859 0 0 11544 0 0 17489 0 0 14368 0 0 6998.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 48143000 48143000 0 0 NaN 3242 1758 287 287 1822 1923 2077 2327 2077 2327 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13735 2077 2327 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13735 2077 2327 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13735 Q96TA1 691 Q96TA1 Q96TA1 Niban-like protein 1 FAM129B sp|Q96TA1|NIBL1_HUMAN Niban-like protein 1 OS=Homo sapiens GN=FAM129B PE=1 SV=3 0.565138 0.761191 0.044635 49.25 39.835 49.25 2 S APAGESPQPKAAPEASSPPASPLQHLLPGKA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPX AAPEAS(0.565)S(0.482)PPAS(0.953)PLQHLLPGK AAPEAS(0.76)S(-0.76)PPAS(10.43)PLQHLLPGK 6 4 -0.50038 0 4475.8 0 0 3304.1 0 0 3620.3 0 0 4469.8 0 0 4058.7 0 0 4391.6 0 0 5003.1 0 0 4858.2 0 0 4785.9 0 0 4636.9 0 0 4232 0 0 3127.9 0 0 3701.8 0 0 4517 0 0 4106.1 0 0 4420 0 0 5041.4 0 0 4994.7 0 0 4731.5 0 0 4478.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 15495000 0 15495000 0 NaN 3243 1759 691 691 49 52;53 57 68 57 68 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20904 57 68 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20904 57 68 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20904 Q96TA1 692 Q96TA1 Q96TA1 Niban-like protein 1 FAM129B sp|Q96TA1|NIBL1_HUMAN Niban-like protein 1 OS=Homo sapiens GN=FAM129B PE=1 SV=3 0.862411 7.97247 1.01929E-11 205.43 182.9 205.43 1;2 S PAGESPQPKAAPEASSPPASPLQHLLPGKAV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPPXX AAPEAS(0.138)S(0.862)PPASPLQHLLPGK AAPEAS(-7.97)S(7.97)PPAS(-43.75)PLQHLLPGK 7 3 -0.73385 6065.6 5601.2 0 8502.1 6008.9 0 6449.6 5839 0 7934.7 6907.3 0 9439.2 6046.1 0 7775.6 7056.8 0 15097 6226 0 10996 7444.2 0 6990.5 6867.3 0 28431 16514 0 5741 5301.1 0 8028.4 5681.5 0 6519.6 5868.7 0 8179.2 7039.8 0 9474.8 6126.5 0 7894.8 7102.7 0 14874 6346.4 0 11761 7949.7 0 7241.3 6748.7 0 27025 15722 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 49444000 15507000 33937000 0 NaN 3244 1759 692 692 49 52;53 56;58 67;69 56 67 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20389 56 67 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20389 56 67 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20389 Q96TA1 696 Q96TA1 Q96TA1 Niban-like protein 1 FAM129B sp|Q96TA1|NIBL1_HUMAN Niban-like protein 1 OS=Homo sapiens GN=FAM129B PE=1 SV=3 0.999983 45.1105 1.9424E-05 131.32 107.99 131.32 2 S SPQPKAAPEASSPPASPLQHLLPGKAVDLGP X;X;X;X;X;X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPXXXXXX AAPEAS(0.441)S(0.559)PPAS(1)PLQHLLPGK AAPEAS(-1.03)S(1.03)PPAS(45.11)PLQHLLPGK 11 3 -0.79795 0 10077 0 0 9313 0 0 9459.3 0 0 11377 0 0 10105 0 0 11448 0 0 11229 0 0 12302 0 0 11653 0 0 21151 0 0 9533.1 0 0 8809.5 0 0 9570.5 0 0 11557 0 0 10233 0 0 11523 0 0 11388 0 0 12944 0 0 11480 0 0 20201 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 49432000 0 49432000 0 NaN 3245 1759 696 696 49 52;53 57;58 68;69 58 69 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21066 58 69 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21066 58 69 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21066 Q96TA1 665 Q96TA1 Q96TA1 Niban-like protein 1 FAM129B sp|Q96TA1|NIBL1_HUMAN Niban-like protein 1 OS=Homo sapiens GN=FAM129B PE=1 SV=3 1 117.73 7.28706E-12 180.69 161.44 162.92 1 S VTEIRGLLAQGLRPESPPPAGPLLNGAPAGE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPPPPPPP GLLAQGLRPES(1)PPPAGPLLNGAPAGESPQPK GLLAQGLRPES(117.73)PPPAGPLLNGAPAGES(-117.73)PQPK 11 5 -2.4432 22992 0 0 24899 0 0 25700 0 0 22803 0 0 41553 0 0 26893 0 0 51775 0 0 36150 0 0 26444 0 0 48098 0 0 21766 0 0 23510 0 0 25936 0 0 23607 0 0 41134 0 0 26980 0 0 51518 0 0 37352 0 0 27167 0 0 46127 0 0 5 0 0 5 0 0 5 0 0 5 0 0 4 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 201660000 201660000 0 0 NaN 3246 1759 665 665 1502 1580 1705;1706;1707;1708 1886;1887;1888;1889;1890 1705 1887 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20197 1707 1889 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20241 1707 1889 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20241 Q96TC7 46 Q96TC7 Q96TC7 Regulator of microtubule dynamics protein 3 RMDN3 sp|Q96TC7|RMD3_HUMAN Regulator of microtubule dynamics protein 3 OS=Homo sapiens GN=RMDN3 PE=1 SV=2 0.817412 6.52102 3.19173E-11 199.94 184.14 199.94 1 S YSQRWKRTQRHGRSQSLPNSLDYTQTSDPGR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.182)QS(0.817)LPNSLDYTQTSDPGR S(-6.52)QS(6.52)LPNS(-32.35)LDY(-130.01)T(-123.89)QT(-148.36)S(-153.12)DPGR 3 3 0.10278 10627 0 0 10814 0 0 10631 0 0 11733 0 0 9750.9 0 0 12552 0 0 14135 0 0 14151 0 0 12679 0 0 10855 0 0 10056 0 0 10221 0 0 10702 0 0 12004 0 0 10008 0 0 12585 0 0 14138 0 0 14460 0 0 12572 0 0 10549 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 104180000 104180000 0 0 NaN 3247 1760 46 46 4240 4518 4815 5345 4815 5345 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14274 4815 5345 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14274 4815 5345 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14274 Q99081 67 Q99081 Q99081 Transcription factor 12 TCF12 sp|Q99081|HTF4_HUMAN Transcription factor 12 OS=Homo sapiens GN=TCF12 PE=1 SV=1 0.99218 21.0343 1.69048E-53 371.36 343.25 371.36 1 S DERGGTTSWGTSGQPSPSYDSSRGFTDSPHY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPXXXXXXXX GGTTSWGTSGQPS(0.992)PS(0.008)YDSSR GGT(-140.19)T(-142.42)S(-133.06)WGT(-75.83)S(-65.25)GQPS(21.03)PS(-21.03)Y(-173.27)DS(-93.57)S(-107.68)R 13 2 0.040225 2822.6 0 0 8873.6 0 0 3478.2 0 0 6914 0 0 6810.6 0 0 3991.9 0 0 7993.6 0 0 7506.3 0 0 8319.5 0 0 2942.9 0 0 2673.3 0 0 8371.4 0 0 3507.6 0 0 7171.8 0 0 6731.7 0 0 4181.3 0 0 8088.9 0 0 7481.8 0 0 8195 0 0 2944.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15784000 15784000 0 0 NaN 3248 1761 67 67 1460 1537 1659 1839 1659 1839 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11520 1659 1839 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11520 1659 1839 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11520 Q99442 117 Q99442 Q99442 Translocation protein SEC62 SEC62 sp|Q99442|SEC62_HUMAN Translocation protein SEC62 OS=Homo sapiens GN=SEC62 PE=1 SV=1 1 53.001 0.0262758 53.001 29.52 53.001 1 S YDKDIKKEKDKGKAESGKEEDKKSKKENIKD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX AES(1)GKEEDKK AES(53)GKEEDKK 3 4 0.73801 14276 0 0 13282 0 0 15288 0 0 14101 0 0 14666 0 0 13381 0 0 15682 0 0 15392 0 0 11898 0 0 4637.1 0 0 13512 0 0 12552 0 0 15330 0 0 14417 0 0 14931 0 0 13479 0 0 15811 0 0 15501 0 0 11901 0 0 4722.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21792000 21792000 0 0 NaN 3249 1764 117 117 158 164 177 201 177 201 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7566 177 201 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7566 177 201 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7566 Q99459 427 Q99459 Q99459 Cell division cycle 5-like protein CDC5L sp|Q99459|CDC5L_HUMAN Cell division cycle 5-like protein OS=Homo sapiens GN=CDC5L PE=1 SV=2 0.411479 1.45616 0.000159576 102.61 71.612 102.61 S PFRTPSNGAEGLTPRSGTTPKPVINSTPGRT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPX S(0.411)GT(0.294)T(0.294)PKPVINSTPGR S(1.46)GT(-1.46)T(-1.46)PKPVINS(-57.79)T(-56.91)PGR 1 3 -0.23814 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3250 1765 427 427 3829 4082 4355 4840 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10630 4355 4840 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10630 4355 4840 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10630 Q99460 56 Q99460 Q99460 26S proteasome non-ATPase regulatory subunit 1 PSMD1 sp|Q99460|PSMD1_HUMAN 26S proteasome non-ATPase regulatory subunit 1 OS=Homo sapiens GN=PSMD1 PE=1 SV=2 0.999998 56.5631 0.0360893 56.563 28.164 56.563 1 S SVDKIEVLYEDEGFRSRQFAALVASKVFYHL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPXXXXXXXXXXXXXX IEVLYEDEGFRS(1)R IEVLY(-56.56)EDEGFRS(56.56)R 12 2 -1.1905 11105 0 0 8315.4 0 0 11224 0 0 9684.7 0 0 8528.5 0 0 10806 0 0 8257.7 0 0 10669 0 0 11547 0 0 21774 0 0 10508 0 0 7863 0 0 11261 0 0 9878.4 0 0 8813.2 0 0 10821 0 0 8508.7 0 0 11363 0 0 11254 0 0 20750 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 91113000 91113000 0 0 NaN 3251 1766 56 56 1829 1930 2084 2335 2084 2335 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19152 2084 2335 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19152 2084 2335 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19152 Q99490 648 Q99490 Q99490 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 AGAP2 sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 0.766295 5.15728 0.0358005 58.246 33.727 58.246 1 S LSTPGSLHRAAKRRTSLFANRRGSDSEKRSL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPXXXXXXXXXX T(0.234)S(0.766)LFANR T(-5.16)S(5.16)LFANR 2 2 0.448 15575 0 0 10334 0 0 14996 0 0 9733.8 0 0 12078 0 0 14422 0 0 13876 0 0 13694 0 0 10548 0 0 10592 0 0 14736 0 0 9758.9 0 0 15101 0 0 10106 0 0 12452 0 0 14258 0 0 13948 0 0 14084 0 0 10549 0 0 10290 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12545000 12545000 0 0 NaN 3252 1767 648 648 4922 5247 5590 6212 5590 6212 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14997 5590 6212 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14997 5590 6212 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14997 Q99504 438 Q99504 Q99504 Eyes absent homolog 3 EYA3 sp|Q99504|EYA3_HUMAN Eyes absent homolog 3 OS=Homo sapiens GN=EYA3 PE=1 SV=3 0.999243 31.2047 0.0382914 49.343 32.672 49.343 1 S REIYDKHKSNVGGLLSPQRKEALQRLRAEIE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX S(0.001)NVGGLLS(0.999)PQRK S(-31.2)NVGGLLS(31.2)PQRK 8 3 0.8496 7467.3 0 0 12416 0 0 7185 0 0 11341 0 0 7868.6 0 0 7904.9 0 0 8358.9 0 0 9782.2 0 0 12431 0 0 2058.5 0 0 7064.9 0 0 11723 0 0 7260.4 0 0 11655 0 0 7955.5 0 0 8104.2 0 0 8596.6 0 0 9801.5 0 0 12093 0 0 2164.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11720000 11720000 0 0 NaN 3253 1768 438 438 4071 4341 4631 5144 4631 5144 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13798 4631 5144 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13798 4631 5144 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13798 Q99543 47 Q99543 Q99543 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed DNAJC2 sp|Q99543|DNJC2_HUMAN DnaJ homolog subfamily C member 2 OS=Homo sapiens GN=DNAJC2 PE=1 SV=4 0.702204 3.72545 1.60427E-10 177.6 143.65 177.6 1 S GRWFEAFVKRRNRNASASFQELEDKKELSEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX NAS(0.702)AS(0.298)FQELEDKK NAS(3.73)AS(-3.73)FQELEDKK 3 3 -0.070762 29881 0 0 38690 0 0 30065 0 0 43940 0 0 16914 0 0 27825 0 0 18132 0 0 28856 0 0 47686 0 0 17384 0 0 28276 0 0 36579 0 0 30105 0 0 44537 0 0 17986 0 0 28655 0 0 19207 0 0 29429 0 0 45799 0 0 17037 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 69979000 69979000 0 0 NaN 3254 1769 47 47 2777;2778 2946;2947 3157 3507 3157 3507 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16674 3157 3507 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16674 3157 3507 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16674 Q99543 49 Q99543 Q99543 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed DNAJC2 sp|Q99543|DNJC2_HUMAN DnaJ homolog subfamily C member 2 OS=Homo sapiens GN=DNAJC2 PE=1 SV=4 0.647343 2.63782 7.83616E-17 247.21 234.42 247.21 1 S WFEAFVKRRNRNASASFQELEDKKELSEESE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX NAS(0.353)AS(0.647)FQELEDK NAS(-2.64)AS(2.64)FQELEDK 5 2 -0.37256 31104 0 0 49596 0 0 30506 0 0 45525 0 0 19012 0 0 29317 0 0 17791 0 0 32994 0 0 47143 0 0 25909 0 0 29430 0 0 46829 0 0 30609 0 0 46732 0 0 19982 0 0 30205 0 0 18972 0 0 33733 0 0 45271 0 0 25160 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 49757000 49757000 0 0 NaN 3255 1769 49 49 2777;2778 2946;2947 3156 3506 3156 3506 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17047 3156 3506 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17047 3156 3506 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17047 Q99549 403 Q99549 Q99549 M-phase phosphoprotein 8 MPHOSPH8 sp|Q99549|MPP8_HUMAN M-phase phosphoprotein 8 OS=Homo sapiens GN=MPHOSPH8 PE=1 SV=2 0.815434 6.97517 2.51017E-05 133.16 115.68 133.16 1 S GRRLSGEERGLWSTDSAEEDKETKRNESKEK X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPXXXXXXX GLWS(0.021)T(0.164)DS(0.815)AEEDKETK GLWS(-15.91)T(-6.98)DS(6.98)AEEDKET(-84.26)K 7 3 -0.54021 14517 0 0 13008 0 0 15921 0 0 13800 0 0 12315 0 0 15009 0 0 14681 0 0 13366 0 0 14481 0 0 13297 0 0 13742 0 0 12293 0 0 15911 0 0 14140 0 0 12744 0 0 14995 0 0 14825 0 0 13871 0 0 14297 0 0 12830 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12849000 12849000 0 0 NaN 3256 1770 403 403 1520 1600 1729 1921 1729 1921 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15954 1729 1921 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15954 1729 1921 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15954 Q99549 392 Q99549 Q99549 M-phase phosphoprotein 8 MPHOSPH8 sp|Q99549|MPP8_HUMAN M-phase phosphoprotein 8 OS=Homo sapiens GN=MPHOSPH8 PE=1 SV=2 1 105.345 0.00147658 105.35 13.144 105.35 1 S KLMPVSAQTPKGRRLSGEERGLWSTDSAEED X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX RLS(1)GEER RLS(105.35)GEER 3 3 -0.20408 15197 0 0 13564 0 0 16417 0 0 13308 0 0 10740 0 0 15726 0 0 11341 0 0 13339 0 0 13431 0 0 5916.1 0 0 14385 0 0 12812 0 0 16392 0 0 13718 0 0 11245 0 0 15637 0 0 11573 0 0 13650 0 0 13163 0 0 5879.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10325000 10325000 0 0 NaN 3257 1770 392 392 3324 3526 3763 4179 3763 4179 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5807 3763 4179 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5807 3763 4179 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5807 Q99549 188 Q99549 Q99549 M-phase phosphoprotein 8 MPHOSPH8 sp|Q99549|MPP8_HUMAN M-phase phosphoprotein 8 OS=Homo sapiens GN=MPHOSPH8 PE=1 SV=2 0.555796 1.22836 0.0131369 65.207 47.996 65.207 1 S AKAGKLKDKSKPDLESSLESLVFDLRTKKRI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPXXXXX S(0.008)KPDLES(0.556)S(0.419)LES(0.017)LVFDLR S(-18.22)KPDLES(1.23)S(-1.23)LES(-15.15)LVFDLR 7 3 -2.8058 6732.6 0 0 7733.3 0 0 7106.7 0 0 8105.8 0 0 7126.4 0 0 6494.7 0 0 7609.7 0 0 8132.8 0 0 7611.7 0 0 24272 0 0 6372.2 0 0 7307.5 0 0 7135.7 0 0 8274.2 0 0 7237.6 0 0 6648.1 0 0 7722.9 0 0 8825.6 0 0 7510.3 0 0 23043 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15997000 15997000 0 0 NaN 3258 1770 188 188 3891 4145 4424 4918 4424 4918 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23647 4424 4918 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23647 4424 4918 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23647 Q99550 937 Q99550 Q99550 M-phase phosphoprotein 9 MPHOSPH9 sp|Q99550|MPP9_HUMAN M-phase phosphoprotein 9 OS=Homo sapiens GN=MPHOSPH9 PE=1 SV=4 0.931433 11.3342 0.00162266 97.271 69.059 97.271 1 S NINPRQTETSVNASRSPEKCAQQRQKRLNSA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPXXXXXXXXXXXX QTETSVNAS(0.069)RS(0.931)PEK QT(-55.2)ET(-45.09)S(-45.09)VNAS(-11.33)RS(11.33)PEK 11 3 0.72837 13389 0 0 12641 0 0 12663 0 0 12342 0 0 11029 0 0 14355 0 0 10004 0 0 13427 0 0 14607 0 0 3403.4 0 0 12667 0 0 11940 0 0 12770 0 0 12723 0 0 11279 0 0 14294 0 0 10359 0 0 13606 0 0 14218 0 0 3515.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9359800 9359800 0 0 NaN 3259 1771 937 937 3154 3346 3577 3967 3577 3967 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7115 3577 3967 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7115 3577 3967 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7115 Q99567 517 Q99567 Q99567 Nuclear pore complex protein Nup88 NUP88 sp|Q99567|NUP88_HUMAN Nuclear pore complex protein Nup88 OS=Homo sapiens GN=NUP88 PE=1 SV=2 1 192.646 3.61323E-10 192.65 146.52 192.65 1 S SPPLLCTREDVEVAESPLRVLAETPDSFEKH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX EDVEVAES(1)PLR EDVEVAES(192.65)PLR 8 2 -0.12889 27358 0 0 34836 0 0 27493 0 0 32724 0 0 23438 0 0 27292 0 0 21814 0 0 29522 0 0 36400 0 0 38210 0 0 25889 0 0 32897 0 0 27623 0 0 33642 0 0 24015 0 0 27699 0 0 22682 0 0 30677 0 0 35298 0 0 36663 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 41927000 41927000 0 0 NaN 3260 1772 517 517 914 967 1048 1157 1048 1157 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13151 1048 1157 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13151 1048 1157 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13151 Q99569 281 Q99569 Q99569 Plakophilin-4 PKP4 sp|Q99569|PKP4_HUMAN Plakophilin-4 OS=Homo sapiens GN=PKP4 PE=1 SV=2 0.499932 0 9.44804E-05 111.68 83.357 111.68 1 S LPAARAASPYSQRPASPTAIRRIGSVTSRQT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPXXXXXXXXXX AASPYSQRPAS(0.5)PT(0.5)AIR AAS(-46.31)PY(-78.69)S(-36.08)QRPAS(0)PT(0)AIR 11 3 0.24249 21818 0 0 23199 0 0 22009 0 0 22865 0 0 16471 0 0 22384 0 0 15331 0 0 20615 0 0 24653 0 0 15437 0 0 20646 0 0 21914 0 0 22081 0 0 23489 0 0 17035 0 0 22465 0 0 15916 0 0 21212 0 0 23930 0 0 15013 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23706000 23706000 0 0 NaN 3261 1773 281 281 74 79 87 100 87 100 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9817 87 100 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9817 87 100 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9817 Q99569 314 Q99569 Q99569 Plakophilin-4 PKP4 sp|Q99569|PKP4_HUMAN Plakophilin-4 OS=Homo sapiens GN=PKP4 PE=1 SV=2 0.997585 26.162 5.1703E-11 205.37 178.23 205.37 1 S PNGPTPQYQTTARVGSPLTLTDAQTRVASPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX VGS(0.998)PLT(0.002)LTDAQTR VGS(26.16)PLT(-26.16)LT(-59.75)DAQT(-132.87)R 3 2 -0.64758 11420 0 0 15545 0 0 12123 0 0 15109 0 0 6870.3 0 0 12311 0 0 7631.1 0 0 11177 0 0 16596 0 0 18645 0 0 10809 0 0 14682 0 0 12104 0 0 15495 0 0 7301.4 0 0 12486 0 0 7976.8 0 0 11817 0 0 15995 0 0 17815 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23184000 23184000 0 0 NaN 3262 1773 314 314 5124 5461 5817 6468 5817 6468 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15919 5817 6468 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15919 5817 6468 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15919 Q99590 796 Q99590 Q99590 Protein SCAF11 SCAF11 sp|Q99590|SCAFB_HUMAN Protein SCAF11 OS=Homo sapiens GN=SCAF11 PE=1 SV=2 0.9993 31.5518 7.72685E-11 182.77 163.56 182.77 1;2 S IDKTKKPRTRRSRFHSPSTTWSPNKDTPQEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP FHS(0.999)PS(0.001)TTWSPNKDTPQEK FHS(31.55)PS(-31.55)T(-60.42)T(-74.08)WS(-113.64)PNKDT(-149.4)PQEK 3 4 -0.50968 39908 14662 0 43205 13868 0 44786 14949 0 42084 13450 0 44589 8893.4 0 52948 16286 0 56304 11692 0 50516 16304 0 48377 14014 0 40726 11246 0 37781 13875 0 40808 13098 0 44836 14968 0 43454 13881 0 45419 9424.4 0 52634 16219 0 56533 11831 0 51993 16692 0 48070 13729 0 39518 10967 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 164110000 147460000 16658000 0 NaN 3263 1774 796 796 1274;1275 1341;1342;1343 1443;1444;1445 1600;1601;1602 1444 1601 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13750 1444 1601 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13750 1443 1600 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14136 Q99590 802 Q99590 Q99590 Protein SCAF11 SCAF11 sp|Q99590|SCAFB_HUMAN Protein SCAF11 OS=Homo sapiens GN=SCAF11 PE=1 SV=2 0.964052 17.3639 2.88829E-05 125.11 105.36 125.11 2 S PRTRRSRFHSPSTTWSPNKDTPQEKKRPQSP X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXPPPPPPPPPPPPPPPPPPXXXXXX FHS(0.91)PS(0.067)T(0.022)T(0.019)WS(0.964)PNKDT(0.018)PQEK FHS(11.38)PS(-11.38)T(-17.03)T(-18.76)WS(17.36)PNKDT(-17.36)PQEK 9 3 0.70302 0 14662 0 0 13868 0 0 14949 0 0 13450 0 0 8893.4 0 0 16286 0 0 11692 0 0 16304 0 0 14014 0 0 11246 0 0 13875 0 0 13098 0 0 14968 0 0 13881 0 0 9424.4 0 0 16219 0 0 11831 0 0 16692 0 0 13729 0 0 10967 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 16658000 0 16658000 0 NaN 3264 1774 802 802 1274;1275 1341;1342;1343 1445 1602 1445 1602 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14383 1445 1602 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14383 1445 1602 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14383 Q99590 963 Q99590 Q99590 Protein SCAF11 SCAF11 sp|Q99590|SCAFB_HUMAN Protein SCAF11 OS=Homo sapiens GN=SCAF11 PE=1 SV=2 0.999595 33.932 0.000453133 111.53 59.039 111.53 1 S KSKSSSFGRIDRDSYSPRWKGRWANDGWRCP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX IDRDSYS(1)PR IDRDS(-33.93)Y(-65.37)S(33.93)PR 7 2 0.11031 13116 0 0 10546 0 0 11936 0 0 12368 0 0 10347 0 0 13574 0 0 10972 0 0 11682 0 0 12218 0 0 3923.5 0 0 12407 0 0 9972.4 0 0 12068 0 0 12607 0 0 10604 0 0 13536 0 0 11173 0 0 11909 0 0 12003 0 0 3964.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16819000 16819000 0 0 NaN 3265 1774 963 963 1797 1897 2044 2280 2044 2280 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8086 2044 2280 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8086 2044 2280 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8086 Q99590 816 Q99590 Q99590 Protein SCAF11 SCAF11 sp|Q99590|SCAFB_HUMAN Protein SCAF11 OS=Homo sapiens GN=SCAF11 PE=1 SV=2 1 45.9154 0.00648035 89.189 54.656 45.915 1;2 S WSPNKDTPQEKKRPQSPSPRRETGKESRKSQ X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX KRPQS(1)PS(1)PR KRPQS(45.92)PS(45.92)PR 5 3 -0.89213 17712 5442.5 0 10363 5134.6 0 16692 6175.3 0 12334 5615.9 0 12699 4978 0 16814 6064.9 0 13469 4732.4 0 14125 5367.2 0 11493 4696.7 0 1125.7 2700.8 0 16756 5152.7 0 9800.6 4853.2 0 16819 6160.9 0 12616 5744.1 0 13131 5118.9 0 16622 6055.5 0 13619 4828 0 14307 5492.1 0 11424 4635.7 0 1386.9 2667.4 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 58195000 47047000 11147000 0 NaN 3266 1774 816 816 2196 2320;2321 2501;2502 2792;2793 2502 2793 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5476 2501 2792 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5268 2501 2792 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5268 Q99590 818 Q99590 Q99590 Protein SCAF11 SCAF11 sp|Q99590|SCAFB_HUMAN Protein SCAF11 OS=Homo sapiens GN=SCAF11 PE=1 SV=2 1 45.9154 0.0418244 45.915 23.441 45.915 2 S PNKDTPQEKKRPQSPSPRRETGKESRKSQSP X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX KRPQS(1)PS(1)PR KRPQS(45.92)PS(45.92)PR 7 3 -0.89213 0 5442.5 0 0 5134.6 0 0 6175.3 0 0 5615.9 0 0 4978 0 0 6064.9 0 0 4732.4 0 0 5367.2 0 0 4696.7 0 0 2700.8 0 0 5152.7 0 0 4853.2 0 0 6160.9 0 0 5744.1 0 0 5118.9 0 0 6055.5 0 0 4828 0 0 5492.1 0 0 4635.7 0 0 2667.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 11147000 0 11147000 0 NaN 3267 1774 818 818 2196 2320;2321 2502 2793 2502 2793 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5476 2502 2793 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5476 2502 2793 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5476 Q99590 830 Q99590 Q99590 Protein SCAF11 SCAF11 sp|Q99590|SCAFB_HUMAN Protein SCAF11 OS=Homo sapiens GN=SCAF11 PE=1 SV=2 0.953178 11.5062 0.0185736 58.098 36.541 58.098 2 S QSPSPRRETGKESRKSQSPSPKNESARGRKK X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPXXXXXXXXX KS(0.953)QS(0.338)PS(0.709)PK KS(11.51)QS(-3.57)PS(3.57)PK 2 3 0.034098 0 16404 0 0 15186 0 0 16990 0 0 14328 0 0 13330 0 0 16456 0 0 16517 0 0 17640 0 0 14352 0 0 2267.5 0 0 15525 0 0 14341 0 0 17035 0 0 14798 0 0 13787 0 0 16419 0 0 16600 0 0 17716 0 0 14253 0 0 2543.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 24700000 0 24700000 0 NaN 3268 1774 830 830 2224 2350;2351 2532 2827 2532 2827 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7686 2532 2827 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7686 2532 2827 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7686 Q99590 832 Q99590 Q99590 Protein SCAF11 SCAF11 sp|Q99590|SCAFB_HUMAN Protein SCAF11 OS=Homo sapiens GN=SCAF11 PE=1 SV=2 0.614368 2.16565 0.00801769 83.182 47.671 83.182 1 S PSPRRETGKESRKSQSPSPKNESARGRKKSR X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX KS(0.373)QS(0.614)PS(0.012)PK KS(-2.17)QS(2.17)PS(-16.92)PK 4 3 0.84133 21874 0 0 15247 0 0 23336 0 0 16282 0 0 13254 0 0 20725 0 0 12860 0 0 18948 0 0 18901 0 0 2407.5 0 0 20704 0 0 14409 0 0 23290 0 0 16726 0 0 14045 0 0 20557 0 0 13275 0 0 19148 0 0 18393 0 0 2705.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16465000 16465000 0 0 NaN 3269 1774 832 832 2224 2350;2351 2531 2826 2531 2826 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6906 2531 2826 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6906 2531 2826 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6906 Q99590 834 Q99590 Q99590 Protein SCAF11 SCAF11 sp|Q99590|SCAFB_HUMAN Protein SCAF11 OS=Homo sapiens GN=SCAF11 PE=1 SV=2 0.709142 3.57388 0.0185736 58.098 36.541 58.098 2 S PRRETGKESRKSQSPSPKNESARGRKKSRSQ X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPXXXXXXXXXXXXX KS(0.953)QS(0.338)PS(0.709)PK KS(11.51)QS(-3.57)PS(3.57)PK 6 3 0.034098 0 16404 0 0 15186 0 0 16990 0 0 14328 0 0 13330 0 0 16456 0 0 16517 0 0 17640 0 0 14352 0 0 2267.5 0 0 15525 0 0 14341 0 0 17035 0 0 14798 0 0 13787 0 0 16419 0 0 16600 0 0 17716 0 0 14253 0 0 2543.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 24700000 0 24700000 0 NaN 3270 1774 834 834 2224 2350;2351 2532 2827 2532 2827 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7686 2532 2827 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7686 2532 2827 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7686 Q99590 1174 Q99590 Q99590 Protein SCAF11 SCAF11 sp|Q99590|SCAFB_HUMAN Protein SCAF11 OS=Homo sapiens GN=SCAF11 PE=1 SV=2 0.635643 2.4399 0.0192362 65.348 46.244 65.348 1 S QNYYSRRGRNSSGPQSGWMKQEEETSGQDSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX NS(0.002)S(0.362)GPQS(0.636)GWMK NS(-25.18)S(-2.44)GPQS(2.44)GWMK 7 2 -0.7628 13063 0 0 20792 0 0 13558 0 0 21970 0 0 14404 0 0 15122 0 0 14501 0 0 17431 0 0 24867 0 0 13036 0 0 12363 0 0 19648 0 0 13634 0 0 22376 0 0 14579 0 0 15517 0 0 15040 0 0 17788 0 0 24097 0 0 12679 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16540000 16540000 0 0 NaN 3271 1774 1174 1174 2938 3116 3336 3698 3336 3698 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14796 3336 3698 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14796 3336 3698 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14796 Q99590 338 Q99590 Q99590 Protein SCAF11 SCAF11 sp|Q99590|SCAFB_HUMAN Protein SCAF11 OS=Homo sapiens GN=SCAF11 PE=1 SV=2 0.963023 14.3406 8.05721E-12 187.35 173.72 187.35 1 S STRNTRAETASQSQRSPISDNSGCDAPGNSN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.963)PIS(0.035)DNS(0.002)GCDAPGNSNPSLSVPSSAESEK S(14.34)PIS(-14.34)DNS(-27.99)GCDAPGNS(-99.67)NPS(-145.31)LS(-150.86)VPS(-163.97)S(-168.57)AES(-180.21)EK 1 3 -0.042149 7063.1 0 0 5729.1 0 0 7423.2 0 0 6830.1 0 0 3938.5 0 0 7608.8 0 0 3814 0 0 7013.9 0 0 7517.2 0 0 5829.4 0 0 6684.9 0 0 5418.4 0 0 7411.1 0 0 6958.2 0 0 4204.3 0 0 7595.4 0 0 3989.7 0 0 7234.2 0 0 7260.1 0 0 5651.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21849000 21849000 0 0 NaN 3272 1774 338 338 4123 4396 4687 5203 4687 5203 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14675 4687 5203 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14675 4687 5203 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14675 Q99590 608 Q99590 Q99590 Protein SCAF11 SCAF11 sp|Q99590|SCAFB_HUMAN Protein SCAF11 OS=Homo sapiens GN=SCAF11 PE=1 SV=2 0.982065 18.3079 9.7644E-18 226.65 201.2 226.65 1 S TEHKDFTLKTEELIESPKLESSEGEIIQTVD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPPPP TEELIES(0.982)PKLES(0.014)S(0.003)EGEIIQTVDR T(-95.62)EELIES(18.31)PKLES(-18.31)S(-24.56)EGEIIQT(-91.31)VDR 7 3 -0.2773 10402 0 0 11013 0 0 9984.9 0 0 9734.9 0 0 8988.7 0 0 10103 0 0 8614.5 0 0 12014 0 0 11609 0 0 76754 0 0 9841.4 0 0 10396 0 0 10065 0 0 10079 0 0 9178.1 0 0 10279 0 0 8868.8 0 0 14289 0 0 11328 0 0 72551 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 52315000 52315000 0 0 NaN 3273 1774 608 608 4679 4990 5315 5907 5315 5907 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21221 5315 5907 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21221 5315 5907 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21221 Q99590 902 Q99590 Q99590 Protein SCAF11 SCAF11 sp|Q99590|SCAFB_HUMAN Protein SCAF11 OS=Homo sapiens GN=SCAF11 PE=1 SV=2 0.967804 14.7798 0.00573812 83.243 61.012 83.243 1 S TSRENKRSQPRVKDSSPGEKSRSQSRERESD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX VKDS(0.032)S(0.968)PGEK VKDS(-14.78)S(14.78)PGEK 5 3 0.98985 72807 0 0 57797 0 0 71068 0 0 56455 0 0 41877 0 0 67889 0 0 46772 0 0 58875 0 0 59733 0 0 9727.5 0 0 68888 0 0 54591 0 0 71313 0 0 58232 0 0 44302 0 0 67444 0 0 47729 0 0 59698 0 0 58388 0 0 10522 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 65966000 65966000 0 0 NaN 3274 1774 902 902 5143 5480 5837 6489 5837 6489 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8523 5837 6489 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8523 5837 6489 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8523 Q99594 148 Q99594 Q99594 Transcriptional enhancer factor TEF-5 TEAD3 sp|Q99594|TEAD3_HUMAN Transcriptional enhancer factor TEF-5 OS=Homo sapiens GN=TEAD3 PE=1 SV=2 0.832372 6.96004 0.0141641 63.726 49.374 63.726 1 S QIVSASVLQNKFSPPSPLPQAVFSTSSRFWS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPXXX FS(0.168)PPS(0.832)PLPQAVFSTSSR FS(-6.96)PPS(6.96)PLPQAVFS(-54.44)T(-54.2)S(-54.2)S(-54.2)R 5 3 0.61129 3503.9 0 0 3001.5 0 0 3342.7 0 0 3723.3 0 0 4007.6 0 0 3842.6 0 0 4488.3 0 0 3043.2 0 0 3846.4 0 0 11401 0 0 3315 0 0 2839.5 0 0 3384.2 0 0 3780.8 0 0 4033.9 0 0 3857.8 0 0 4528.1 0 0 3427.1 0 0 3822.5 0 0 10805 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8023000 8023000 0 0 NaN 3275 1775 148 148 1324 1397 1504 1666 1504 1666 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21675 1504 1666 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21675 1504 1666 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21675 Q99598 33 Q99598 Q99598 Translin-associated protein X TSNAX sp|Q99598|TSNAX_HUMAN Translin-associated protein X OS=Homo sapiens GN=TSNAX PE=1 SV=1 0.874035 9.21537 0.000142651 107.5 79.169 107.5 1 S FPHNQRREGKDVNSSSPVMLAFKSFQQELDA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPXXXXXXXX DVNS(0.021)S(0.105)S(0.874)PVMLAFK DVNS(-16.14)S(-9.22)S(9.22)PVMLAFK 6 3 1.0465 5687.7 0 0 7091.5 0 0 6734.4 0 0 8224.6 0 0 4839.9 0 0 5686.4 0 0 5488 0 0 6695.3 0 0 7176.4 0 0 8093.7 0 0 5386 0 0 6705.5 0 0 6699 0 0 8334.8 0 0 5034.2 0 0 5840.9 0 0 5601.4 0 0 6920.6 0 0 7009.3 0 0 7776.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10166000 10166000 0 0 NaN 3276 1776 33 33 840 888 944 1039 944 1039 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20914 944 1039 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20914 944 1039 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20914 Q99607 151 Q99607 Q99607 ETS-related transcription factor Elf-4 ELF4 sp|Q99607|ELF4_HUMAN ETS-related transcription factor Elf-4 OS=Homo sapiens GN=ELF4 PE=1 SV=1 0.829664 6.87597 1.30987E-08 157 122.05 157 1 S FPASEPDALNRAGDTSDQEGHSLEEKASREE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPXXXXX AGDT(0.17)S(0.83)DQEGHSLEEK AGDT(-6.88)S(6.88)DQEGHS(-77.62)LEEK 5 3 -0.35295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3277 1777 151 151 193 201 217 244 217 244 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9034 217 244 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9034 217 244 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9034 Q99607 641 Q99607 Q99607 ETS-related transcription factor Elf-4 ELF4 sp|Q99607|ELF4_HUMAN ETS-related transcription factor Elf-4 OS=Homo sapiens GN=ELF4 PE=1 SV=1 0.829132 6.92838 2.99533E-05 127.49 105.62 127.49 1 S MAEPSVTTSGSLLTRSPTPAPFSPFNPTSLI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.829)PT(0.168)PAPFS(0.003)PFNPTSLIK S(6.93)PT(-6.93)PAPFS(-24.9)PFNPT(-84.08)S(-93.54)LIK 1 3 0.19976 42354 0 0 28273 0 0 34716 0 0 23766 0 0 37421 0 0 38029 0 0 33392 0 0 37812 0 0 25571 0 0 83921 0 0 40049 0 0 26683 0 0 35422 0 0 24906 0 0 37751 0 0 37637 0 0 33970 0 0 40466 0 0 25563 0 0 79897 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 39410000 39410000 0 0 NaN 3278 1777 641 641 4205 4482 4776 5302 4776 5302 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23827 4776 5302 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23827 4776 5302 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23827 Q99607 188 Q99607 Q99607 ETS-related transcription factor Elf-4 ELF4 sp|Q99607|ELF4_HUMAN ETS-related transcription factor Elf-4 OS=Homo sapiens GN=ELF4 PE=1 SV=1 0.681493 3.97177 2.38573E-10 176.51 146.25 109.36 1 S KSKKRIRKTKGNRSTSPVTDPSIPIRKKSKD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX S(0.045)T(0.273)S(0.681)PVTDPSIPIRK S(-11.78)T(-3.97)S(3.97)PVT(-34.93)DPS(-68.16)IPIRK 3 3 0.63501 33190 0 0 40620 0 0 33554 0 0 35506 0 0 57859 0 0 34516 0 0 56109 0 0 42148 0 0 37863 0 0 20902 0 0 31408 0 0 38343 0 0 34060 0 0 36752 0 0 57239 0 0 34777 0 0 56699 0 0 42612 0 0 38133 0 0 20658 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 83450000 83450000 0 0 NaN 3279 1777 188 188 4528;4529 4827;4828 5142;5143 5710;5711 5143 5711 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14654 5142 5710 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15246 5142 5710 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15246 Q99638 277 Q99638 Q99638 Cell cycle checkpoint control protein RAD9A RAD9A sp|Q99638|RAD9A_HUMAN Cell cycle checkpoint control protein RAD9A OS=Homo sapiens GN=RAD9A PE=1 SV=1 1 64.2381 3.73806E-44 344.01 331.66 344.01 1 S LATLSDTDSHSQDLGSPERHQPVPQLQAHST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX DSLLDGHFVLATLSDTDSHSQDLGS(1)PER DS(-310.39)LLDGHFVLAT(-201.33)LS(-169.08)DT(-130.29)DS(-109.54)HS(-64.24)QDLGS(64.24)PER 25 4 -0.68014 6750.7 0 0 10280 0 0 7382.4 0 0 10312 0 0 8527.2 0 0 8216.8 0 0 7745 0 0 9798.6 0 0 9028.5 0 0 47740 0 0 6390.2 0 0 9711.6 0 0 7409.9 0 0 10553 0 0 8576 0 0 8439.4 0 0 7956.4 0 0 11206 0 0 8854 0 0 45180 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 46456000 46456000 0 0 NaN 3280 1779 277 277 813 861 917 1010;1011 917 1010 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22700 917 1010 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22700 917 1010 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22700 Q99638 326 Q99638 Q99638 Cell cycle checkpoint control protein RAD9A RAD9A sp|Q99638|RAD9A_HUMAN Cell cycle checkpoint control protein RAD9A OS=Homo sapiens GN=RAD9A PE=1 SV=1 0.534978 0.678923 0.00740658 81.317 57.518 81.317 1 S ETTIGNEGSRVLPSISLSPGPQPPKSPGPHS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPXXXXXX VLPS(0.007)IS(0.535)LS(0.458)PGPQPPK VLPS(-18.55)IS(0.68)LS(-0.68)PGPQPPK 6 3 -0.1206 4192.5 0 0 3610.9 0 0 3632.9 0 0 4359.3 0 0 5153.2 0 0 4030.5 0 0 5143.7 0 0 4518.2 0 0 4008 0 0 14725 0 0 3965.1 0 0 3415.4 0 0 3708.9 0 0 4425 0 0 5138.5 0 0 4088.5 0 0 5205.2 0 0 4956.8 0 0 4002.8 0 0 13970 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6653400 6653400 0 0 NaN 3281 1779 326 326 5169 5508 5870 6524 5870 6524 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21544 5870 6524 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21544 5870 6524 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21544 Q99640 143 Q99640 Q99640 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase PKMYT1 sp|Q99640|PMYT1_HUMAN Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase OS=Homo sapiens GN=PKMYT1 PE=1 SV=1 0.923705 10.8304 0.000119072 128.08 101.48 128.08 1 S RSKEDGRLYAVKRSMSPFRGPKDRARKLAEV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX S(0.076)MS(0.924)PFRGPK S(-10.83)MS(10.83)PFRGPK 3 3 -0.64055 11787 0 0 26356 0 0 13677 0 0 25503 0 0 12477 0 0 9321.8 0 0 12281 0 0 16664 0 0 26774 0 0 2540.5 0 0 11161 0 0 24893 0 0 13648 0 0 25978 0 0 12743 0 0 10163 0 0 12907 0 0 16507 0 0 25803 0 0 2777.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 48417000 48417000 0 0 NaN 3282 1780 143 143 4036 4305 4593 5101 4593 5101 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13239 4593 5101 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13239 4593 5101 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13239 Q99661 106 Q99661 Q99661 Kinesin-like protein KIF2C KIF2C sp|Q99661|KIF2C_HUMAN Kinesin-like protein KIF2C OS=Homo sapiens GN=KIF2C PE=1 SV=2 1 40.7674 0.0406046 40.767 15.05 40.767 1 S QKRRSVNSKIPAPKESLRSRSTRMSTVSELR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX IPAPKES(1)LR IPAPKES(40.77)LR 7 3 0.090424 7793.2 0 0 10761 0 0 6363 0 0 11992 0 0 7031.8 0 0 6573.1 0 0 5903.2 0 0 8054.6 0 0 12235 0 0 2108.7 0 0 7369 0 0 10173 0 0 6495.5 0 0 12151 0 0 7086.4 0 0 6853 0 0 6236.5 0 0 8085.4 0 0 11804 0 0 2172 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9056500 9056500 0 0 NaN 3283 1781 106 106 1903 2010 2170 2430 2170 2430 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13360 2170 2430 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13360 2170 2430 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13360 Q99684 56 Q99684 Q99684 Zinc finger protein Gfi-1 GFI1 sp|Q99684|GFI1_HUMAN Zinc finger protein Gfi-1 OS=Homo sapiens GN=GFI1 PE=1 SV=2 0.998999 29.9911 7.04058E-11 199.7 173.15 199.7 1 S TSNAGGAKAEPRDRLSPESQLTEAPDRASAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPXXXX DRLS(0.999)PES(0.001)QLTEAPDR DRLS(29.99)PES(-29.99)QLT(-66.24)EAPDR 4 3 -0.48609 17442 0 0 10167 0 0 16259 0 0 9694.1 0 0 11124 0 0 17317 0 0 12551 0 0 14473 0 0 9954 0 0 5022.6 0 0 16500 0 0 9602.1 0 0 16379 0 0 10105 0 0 11609 0 0 16991 0 0 12636 0 0 14779 0 0 9931.7 0 0 5064.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29902000 29902000 0 0 NaN 3284 1782 56 56 788 836 892 983 892 983 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12260 892 983 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12260 892 983 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12260 Q99684 94 Q99684 Q99684 Zinc finger protein Gfi-1 GFI1 sp|Q99684|GFI1_HUMAN Zinc finger protein Gfi-1 OS=Homo sapiens GN=GFI1 PE=1 SV=2 0.869178 8.39634 2.25799E-08 168.92 148.42 168.92 1 S VCERSSEFEDFWRPPSPSASPASEKSMCPSL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPPPXXXXXX SSEFEDFWRPPS(0.869)PS(0.126)AS(0.005)PASEK S(-106.72)S(-102.14)EFEDFWRPPS(8.4)PS(-8.4)AS(-22.34)PAS(-48.34)EK 12 3 -0.6017 21647 0 0 5118.5 0 0 22379 0 0 5511.8 0 0 8699.5 0 0 22664 0 0 8176.7 0 0 13441 0 0 5791.9 0 0 25113 0 0 20487 0 0 4837.5 0 0 22324 0 0 5910.9 0 0 9626.3 0 0 21884 0 0 8283 0 0 14596 0 0 5816 0 0 23958 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18239000 18239000 0 0 NaN 3285 1782 94 94 4334 4620 4923 5467 4923 5467 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20671 4923 5467 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20671 4923 5467 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20671 Q99698 2124 Q99698 Q99698 Lysosomal-trafficking regulator LYST sp|Q99698|LYST_HUMAN Lysosomal-trafficking regulator OS=Homo sapiens GN=LYST PE=1 SV=3 0.98143 17.9369 0.0154102 72.62 53.522 72.62 1 S FPTSSLLTQSQKLTGSLGCSIDRLQNIADTY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX LT(0.016)GS(0.981)LGCS(0.003)IDR LT(-17.94)GS(17.94)LGCS(-25.47)IDR 4 2 -0.11352 30247 0 0 9805.1 0 0 30503 0 0 9601 0 0 10549 0 0 29512 0 0 10001 0 0 16786 0 0 8866.7 0 0 8734.9 0 0 28622 0 0 9261.4 0 0 30455 0 0 10190 0 0 11874 0 0 28549 0 0 10176 0 0 17594 0 0 8796.9 0 0 8613.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 77101000 77101000 0 0 NaN 3286 1783 2124 2124 2622 2769 2969 3306 2969 3306 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15484 2969 3306 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15484 2969 3306 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15484 Q99698 2105 Q99698 Q99698 Lysosomal-trafficking regulator LYST sp|Q99698|LYST_HUMAN Lysosomal-trafficking regulator OS=Homo sapiens GN=LYST PE=1 SV=3 0.999969 45.1286 2.92021E-11 200.95 152.81 182.47 1 S NIIPQQMAAHMLRSRSLPAFPTSSLLTQSQK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(1)LPAFPTSSLLTQSQK S(45.13)LPAFPT(-45.13)S(-69.33)S(-79.63)LLT(-143.47)QS(-170.82)QK 1 3 2.1631 107140 0 0 9145.5 0 0 107960 0 0 12437 0 0 8120.2 0 0 105250 0 0 14712 0 0 49861 0 0 7120.3 0 0 37018 0 0 101390 0 0 8658.2 0 0 107450 0 0 14061 0 0 14221 0 0 100730 0 0 14451 0 0 53276 0 0 7347.6 0 0 36011 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 121960000 121960000 0 0 NaN 3287 1783 2105 2105 3958;4285 4217;4567 4500;4867 5002;5401 4500 5002 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22749 4867 5401 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19696 4867 5401 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19696 Q99698 2264 Q99698 Q99698 Lysosomal-trafficking regulator LYST sp|Q99698|LYST_HUMAN Lysosomal-trafficking regulator OS=Homo sapiens GN=LYST PE=1 SV=3 1 54.066 0.0442546 54.066 31.98 54.066 1 S AFPSQNGSAAVGRWPSLVDRNTDDWENFAYS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX WPS(1)LVDR WPS(54.07)LVDR 3 2 0.69273 6998.3 0 0 5177.5 0 0 7411.7 0 0 3985.6 0 0 5306.9 0 0 8413.5 0 0 4759.8 0 0 5222.6 0 0 5356.1 0 0 5063.8 0 0 6623.7 0 0 4884.2 0 0 7412.6 0 0 4236.2 0 0 5502.5 0 0 8205.2 0 0 4887.7 0 0 5514.9 0 0 5259.5 0 0 4889 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27052000 27052000 0 0 NaN 3288 1783 2264 2264 5346 5695 6073 6750 6073 6750 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18997 6073 6750 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18997 6073 6750 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18997 Q99700 772 Q99700 Q99700 Ataxin-2 ATXN2 sp|Q99700|ATX2_HUMAN Ataxin-2 OS=Homo sapiens GN=ATXN2 PE=1 SV=2 0.886116 9.32031 0.000109946 116.65 96.266 116.65 1 S NSPAGNKENIKPNETSPSFSKAENKGISPVV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPXXXXXXXXXX ENIKPNET(0.104)S(0.886)PS(0.01)FSK ENIKPNET(-9.32)S(9.32)PS(-19.38)FS(-44.78)K 9 3 -0.66818 33222 0 0 43783 0 0 34542 0 0 48504 0 0 26553 0 0 35329 0 0 29075 0 0 36737 0 0 53387 0 0 22702 0 0 31442 0 0 41387 0 0 34613 0 0 49303 0 0 27477 0 0 36061 0 0 30140 0 0 37479 0 0 51645 0 0 22227 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 40481000 40481000 0 0 NaN 3289 1784 772 772 1072 1130 1218 1339 1218 1339 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13334 1218 1339 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13334 1218 1339 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13334 Q99700 624 Q99700 Q99700 Ataxin-2 ATXN2 sp|Q99700|ATX2_HUMAN Ataxin-2 OS=Homo sapiens GN=ATXN2 PE=1 SV=2 0.999992 53.6382 0.00428766 88.593 63.739 88.593 1 S STMPKRMSSEGPPRMSPKAQRHPRNHRVSAG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX MSSEGPPRMS(1)PK MS(-53.64)S(-53.98)EGPPRMS(53.64)PK 10 3 -0.30224 18161 0 0 23118 0 0 20562 0 0 25548 0 0 23212 0 0 16448 0 0 27921 0 0 25392 0 0 25757 0 0 4008.8 0 0 17194 0 0 21852 0 0 20608 0 0 25937 0 0 23463 0 0 17012 0 0 28135 0 0 25245 0 0 25506 0 0 4362.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 39210000 39210000 0 0 NaN 3290 1784 624 624 2754 2922 3132 3480 3132 3480 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11612 3132 3480 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11612 3132 3480 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11612 Q99700 667 Q99700 Q99700 Ataxin-2 ATXN2 sp|Q99700|ATX2_HUMAN Ataxin-2 OS=Homo sapiens GN=ATXN2 PE=1 SV=2 0.544921 0.798098 5.08604E-07 147.49 119.21 105.51 2 S HNPPSEAATPPVARTSPSGGTWSSVVSGVPR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP T(0.454)S(0.545)PS(0.002)GGTWSSVVS(0.019)GVPRLS(0.98)PK T(-0.8)S(0.8)PS(-25.49)GGT(-42.8)WS(-41.62)S(-34.41)VVS(-17.1)GVPRLS(17.1)PK 2 3 0.71624 0 3874.5 0 0 9676.2 0 0 5233.8 0 0 9750.4 0 0 5361.4 0 0 5398.6 0 0 5486.4 0 0 7024 0 0 9763.7 0 0 24251 0 0 3671.4 0 0 9141.2 0 0 5193.8 0 0 9937 0 0 5439.1 0 0 5671.6 0 0 5695.8 0 0 7713.3 0 0 9452.5 0 0 22998 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 16381000 0 16381000 0 NaN 3291 1784 667 667 4942;4943 5267;5268;5269 5612 6237 5612 6237 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21010 5610 6235 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18213 5610 6235 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18213 Q99700 684 Q99700 Q99700 Ataxin-2 ATXN2 sp|Q99700|ATX2_HUMAN Ataxin-2 OS=Homo sapiens GN=ATXN2 PE=1 SV=2 1 68.0988 7.38521E-12 203.79 175.61 203.79 1;2 S SGGTWSSVVSGVPRLSPKTHRPRSPRQNSIG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX TSPSGGTWSSVVSGVPRLS(1)PK T(-174.15)S(-170.49)PS(-160.7)GGT(-139.52)WS(-113.87)S(-102.85)VVS(-68.1)GVPRLS(68.1)PK 19 3 0.85843 6042.9 3874.5 0 17005 9676.2 0 6995.8 5233.8 0 13834 9750.4 0 13591 5361.4 0 8794.8 5398.6 0 17417 5486.4 0 14146 7024 0 17566 9763.7 0 20293 24251 0 5721.7 3671.4 0 16046 9141.2 0 7077.5 5193.8 0 14317 9937 0 13457 5439.1 0 9145.6 5671.6 0 17549 5695.8 0 14593 7713.3 0 17326 9452.5 0 19435 22998 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 36015000 19634000 16381000 0 NaN 3292 1784 684 684 4943 5268;5269 5611;5612 6236;6237 5611 6236 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19572 5611 6236 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19572 5611 6236 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19572 Q99708 327 Q99708 Q99708 DNA endonuclease RBBP8 RBBP8 sp|Q99708|COM1_HUMAN DNA endonuclease RBBP8 OS=Homo sapiens GN=RBBP8 PE=1 SV=2 0.939485 11.9103 2.08348E-11 210.14 146.02 210.14 1 S TSKTPPQEELPTRVSSPVFGATSSIKSGLDL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX VS(0.061)S(0.939)PVFGATSSIK VS(-11.91)S(11.91)PVFGAT(-83.97)S(-79.43)S(-99.56)IK 3 2 -0.15005 22058 0 0 20231 0 0 23341 0 0 18119 0 0 16961 0 0 27098 0 0 17765 0 0 20460 0 0 22609 0 0 64239 0 0 20877 0 0 19100 0 0 23353 0 0 18877 0 0 17604 0 0 26799 0 0 18177 0 0 22716 0 0 22102 0 0 60962 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24906000 24906000 0 0 NaN 3293 1785 327 327 5279 5626 5997 6663 5997 6663 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17949 5997 6663 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17949 5997 6663 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17949 Q99728 330 Q99728 Q99728 BRCA1-associated RING domain protein 1 BARD1 sp|Q99728|BARD1_HUMAN BRCA1-associated RING domain protein 1 OS=Homo sapiens GN=BARD1 PE=1 SV=2 0.986599 18.7058 0.0140831 81.263 11.889 81.263 1 S PLENNGKRGHHNRLSSPISKRCRTSILSTSG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX LS(0.013)S(0.987)PISK LS(-18.71)S(18.71)PIS(-39.54)K 3 2 -0.49984 22615 0 0 17780 0 0 20963 0 0 19711 0 0 15894 0 0 24730 0 0 14814 0 0 19483 0 0 18884 0 0 8877.1 0 0 21393 0 0 16807 0 0 21139 0 0 20201 0 0 16417 0 0 24515 0 0 15242 0 0 20014 0 0 18460 0 0 8809.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13697000 13697000 0 0 NaN 3294 1786 330 330 2595 2741 2940 3274 2940 3274 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13782 2940 3274 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13782 2940 3274 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13782 Q99729 242 Q99729 Q99729 Heterogeneous nuclear ribonucleoprotein A/B HNRNPAB sp|Q99729|ROAA_HUMAN Heterogeneous nuclear ribonucleoprotein A/B OS=Homo sapiens GN=HNRNPAB PE=1 SV=2 1 177.796 1.15726E-22 263.98 242.63 263.98 1 S KVAQPKEVYQQQQYGSGGRGNRNRGNRGSGG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX EVYQQQQYGS(1)GGR EVY(-203.82)QQQQY(-177.8)GS(177.8)GGR 10 2 0.78077 5167.9 0 0 17304 0 0 6490.6 0 0 15691 0 0 14391 0 0 6666.9 0 0 16137 0 0 13303 0 0 17151 0 0 2588.5 0 0 4895.1 0 0 16338 0 0 6559.6 0 0 16065 0 0 14163 0 0 7173.4 0 0 16370 0 0 13164 0 0 16880 0 0 2745.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10512000 10512000 0 0 NaN 3295 1787 242 242 1227 1291 1391 1542 1391 1542 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8712 1391 1542 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8712 1391 1542 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8712 Q99733 7 Q99733 Q99733 Nucleosome assembly protein 1-like 4 NAP1L4 sp|Q99733|NP1L4_HUMAN Nucleosome assembly protein 1-like 4 OS=Homo sapiens GN=NAP1L4 PE=1 SV=1 0.979541 16.986 1.14857E-41 137.61 116.37 137.61 1 S _________MADHSFSDGVPSDSVEAAKNAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPXXX ADHS(0.02)FS(0.98)DGVPS(0.001)DSVEAAK ADHS(-16.99)FS(16.99)DGVPS(-30.68)DS(-48.14)VEAAK 6 2 -0.057186 4173.5 0 0 6190.1 0 0 3081.4 0 0 7634.3 0 0 4252.2 0 0 3976.1 0 0 5164.9 0 0 6271.7 0 0 9353 0 0 10235 0 0 3945.1 0 0 5855.8 0 0 3181.6 0 0 7691.7 0 0 4262.9 0 0 4196.8 0 0 5328.3 0 0 6510.4 0 0 9051 0 0 9782.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7301400 7301400 0 0 NaN 3296 1788 7 7 106 113 122 136 122 136 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14526 122 136 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14526 122 136 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14526 Q99733 125 Q99733 Q99733 Nucleosome assembly protein 1-like 4 NAP1L4 sp|Q99733|NP1L4_HUMAN Nucleosome assembly protein 1-like 4 OS=Homo sapiens GN=NAP1L4 PE=1 SV=1 1 86.5964 6.2672E-57 368.92 350.31 368.92 1 S ITGDVEPTDAESEWHSENEEEEKLAGDMKSK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPPXX EFITGDVEPTDAESEWHS(1)ENEEEEKLAGDMK EFIT(-257.65)GDVEPT(-182.61)DAES(-86.6)EWHS(86.6)ENEEEEKLAGDMK 18 4 0.48243 3861 0 0 3065.5 0 0 3298.4 0 0 3729 0 0 3290.7 0 0 3625.7 0 0 3759.7 0 0 7248.2 0 0 3674.9 0 0 116790 0 0 3651.4 0 0 2899.6 0 0 3354.4 0 0 3786.7 0 0 3346.4 0 0 3904.2 0 0 3802.2 0 0 10649 0 0 3629.6 0 0 110140 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 60281000 60281000 0 0 NaN 3297 1788 125 125 944 998 1083 1195;1196 1083 1196 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20814 1083 1196 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20814 1083 1196 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20814 Q99741 54 Q99741 Q99741 Cell division control protein 6 homolog CDC6 sp|Q99741|CDC6_HUMAN Cell division control protein 6 homolog OS=Homo sapiens GN=CDC6 PE=1 SV=1 1 61.6789 0.0288585 61.679 6.3089 61.679 1 S VQTVTCSPRVKALPLSPRKRLGDDNLCNTPH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX ALPLS(1)PR ALPLS(61.68)PR 5 2 0.52766 8479 0 0 12889 0 0 10021 0 0 14359 0 0 7121.6 0 0 11146 0 0 6702.5 0 0 10837 0 0 15771 0 0 2395.5 0 0 8029 0 0 12184 0 0 9965.9 0 0 14602 0 0 7400.9 0 0 11316 0 0 7091 0 0 10955 0 0 15176 0 0 2506.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25695000 25695000 0 0 NaN 3298 1789 54 54 301 322 343 383 343 383 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14237 343 383 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14237 343 383 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14237 Q99759 175 Q99759 Q99759 Mitogen-activated protein kinase kinase kinase 3 MAP3K3 sp|Q99759|M3K3_HUMAN Mitogen-activated protein kinase kinase kinase 3 OS=Homo sapiens GN=MAP3K3 PE=1 SV=2 0.888385 9.00878 1.08659E-06 147.24 79.252 147.24 1 S PRSRHLSVSSQNPGRSSPPPGYVPERQQHIA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPXXXXX S(0.888)S(0.112)PPPGYVPER S(9.01)S(-9.01)PPPGY(-107.62)VPER 1 2 0.055366 11042 0 0 13266 0 0 11489 0 0 12418 0 0 16708 0 0 11414 0 0 19392 0 0 14021 0 0 13231 0 0 7655.7 0 0 10450 0 0 12527 0 0 11612 0 0 12786 0 0 16679 0 0 11533 0 0 19442 0 0 14194 0 0 13317 0 0 7533.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15632000 15632000 0 0 NaN 3299 1790 175 175 4393 4681 4985 5532 4985 5532 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10178 4985 5532 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10178 4985 5532 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10178 Q99767 480 Q99767 Q99767 Amyloid beta A4 precursor protein-binding family A member 2 APBA2 sp|Q99767|APBA2_HUMAN Amyloid beta A4 precursor protein-binding family A member 2 OS=Homo sapiens GN=APBA2 PE=1 SV=3 0.998275 29.4286 9.24841E-11 179.79 158.5 179.79 1 S NIVVLMARRRMPRSASQDCIETTPGAQEGKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.001)AS(0.998)QDCIET(0.001)TPGAQEGKK S(-32.68)AS(29.43)QDCIET(-29.43)T(-43.23)PGAQEGKK 3 3 0.21412 43406 0 0 43808 0 0 42862 0 0 41681 0 0 43151 0 0 44675 0 0 41002 0 0 41594 0 0 46555 0 0 31885 0 0 41071 0 0 41372 0 0 43191 0 0 42974 0 0 43748 0 0 44668 0 0 41992 0 0 42802 0 0 45701 0 0 30986 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 42411000 42411000 0 0 NaN 3300 1791 480 480 3617;3618 3845;3846 4098;4099 4555;4556 4099 4556 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10763 4099 4556 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10763 4099 4556 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10763 Q99829 54 Q99829 Q99829 Copine-1 CPNE1 sp|Q99829|CPNE1_HUMAN Copine-1 OS=Homo sapiens GN=CPNE1 PE=1 SV=1 0.498794 0 0.000264361 124.6 94.825 124.6 S GSWAELGRTERVRNCSSPEFSKTLQLEYRFE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX NCS(0.499)S(0.499)PEFS(0.002)K NCS(0)S(0)PEFS(-23.15)K 3 2 -1.0649 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3301 1792 54 54 2786 2955 3165 3516 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11167 3165 3516 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11167 3165 3516 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11167 Q99829 55 Q99829 Q99829 Copine-1 CPNE1 sp|Q99829|CPNE1_HUMAN Copine-1 OS=Homo sapiens GN=CPNE1 PE=1 SV=1 0.498794 0 0.000264361 124.6 94.825 124.6 S SWAELGRTERVRNCSSPEFSKTLQLEYRFET X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NCS(0.499)S(0.499)PEFS(0.002)K NCS(0)S(0)PEFS(-23.15)K 4 2 -1.0649 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3302 1792 55 55 2786 2955 3165 3516 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11167 3165 3516 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11167 3165 3516 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11167 Q99856 101 Q99856 Q99856 AT-rich interactive domain-containing protein 3A ARID3A sp|Q99856|ARI3A_HUMAN AT-rich interactive domain-containing protein 3A OS=Homo sapiens GN=ARID3A PE=1 SV=2 0.980009 16.9041 0.00067803 101.79 39.228 101.79 1 S PGSEEEDAAREGTPGSPGRGREGPGEEHFED X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX EGT(0.02)PGS(0.98)PGR EGT(-16.9)PGS(16.9)PGR 6 2 0.036865 5321.9 0 0 6093.9 0 0 6469.7 0 0 6180.3 0 0 4387.5 0 0 6790.3 0 0 4446 0 0 5233 0 0 6649.9 0 0 3307.8 0 0 5040.2 0 0 5757.2 0 0 6423.2 0 0 6350.3 0 0 4578.3 0 0 6765.8 0 0 4583.2 0 0 5409.1 0 0 6468 0 0 3235.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12209000 12209000 0 0 NaN 3303 1795 101 101 983 1038 1124 1239 1124 1239 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5638 1124 1239 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5638 1124 1239 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5638 Q99952 419 Q99952 Q99952 Tyrosine-protein phosphatase non-receptor type 18 PTPN18 sp|Q99952|PTN18_HUMAN Tyrosine-protein phosphatase non-receptor type 18 OS=Homo sapiens GN=PTPN18 PE=1 SV=2 0.999595 33.92 1.05462E-07 153.66 140.99 153.66 1 S EDARGTLPGRVPADQSPAGSGAYEDVAGGAQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP VPADQS(1)PAGSGAYEDVAGGAQTGGLGFNLR VPADQS(33.92)PAGS(-33.92)GAY(-73.22)EDVAGGAQT(-123.45)GGLGFNLR 6 3 0.18591 1519.6 0 0 1966.2 0 0 1648.4 0 0 2003 0 0 3284.8 0 0 1519.5 0 0 2863.6 0 0 3216 0 0 1999 0 0 30194 0 0 1438.4 0 0 1857.6 0 0 1671.7 0 0 2046.6 0 0 3230 0 0 1622.8 0 0 2911.4 0 0 4070 0 0 2009.1 0 0 28506 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12476000 12476000 0 0 NaN 3304 1796 419 419 5199 5542 5906 6563 5906 6563 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20465 5906 6563 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20465 5906 6563 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20465 Q99961 288 Q99961 Q99961 Endophilin-A2 SH3GL1 sp|Q99961|SH3G1_HUMAN Endophilin-A2 OS=Homo sapiens GN=SH3GL1 PE=1 SV=1 0.874289 9.20776 0.0154287 76.17 12.636 76.17 1 S GGFPCTTAPKIAASSSFRSSDKPIRTPSRSM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPXXXXXXXXXXXXX IAAS(0.021)S(0.105)S(0.874)FR IAAS(-16.24)S(-9.21)S(9.21)FR 6 2 0.050483 27700 0 0 27684 0 0 28854 0 0 25409 0 0 13008 0 0 26104 0 0 15789 0 0 23131 0 0 28749 0 0 3237.8 0 0 26216 0 0 26139 0 0 28800 0 0 26239 0 0 14187 0 0 26103 0 0 16293 0 0 23415 0 0 27817 0 0 3584.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 302780000 302780000 0 0 NaN 3305 1797 288 288 1765 1864 2011 2242 2011 2242 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11751 2011 2242 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11751 2011 2242 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11751 Q99961;Q99963;Q99962 2;2;2 Q99961 Q99961 Endophilin-A2;Endophilin-A3;Endophilin-A1 SH3GL1;SH3GL3;SH3GL2 sp|Q99961|SH3G1_HUMAN Endophilin-A2 OS=Homo sapiens GN=SH3GL1 PE=1 SV=1;sp|Q99963|SH3G3_HUMAN Endophilin-A3 OS=Homo sapiens GN=SH3GL3 PE=1 SV=1;sp|Q99962|SH3G2_HUMAN Endophilin-A1 OS=Homo sapiens GN=SH3GL2 PE=1 SV=1 1 43.6348 0.0452804 43.635 43.635 43.635 1 S ______________MSVAGLKKQFYKASQLV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX S(1)VAGLKK S(43.63)VAGLKK 1 3 -0.20145 22212 0 0 7289.5 0 0 24274 0 0 7191.8 0 0 11354 0 0 24272 0 0 11295 0 0 14912 0 0 8380.4 0 0 1279 0 0 21026 0 0 6885.6 0 0 24165 0 0 7664.7 0 0 12281 0 0 23452 0 0 11421 0 0 15359 0 0 8392.6 0 0 1549.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9214800 9214800 0 0 NaN 3306 1797 2 2 4545 4847 5164 5734 5164 5734 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13491 5164 5734 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13491 5164 5734 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13491 Q9BPX3 674 Q9BPX3 Q9BPX3 Condensin complex subunit 3 NCAPG sp|Q9BPX3|CND3_HUMAN Condensin complex subunit 3 OS=Homo sapiens GN=NCAPG PE=1 SV=1 1 84.9431 2.66181E-82 440.62 413.29 305.58 1 S TKKIKTLHCEGTEINSDDEQESKEVEETATA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPPPPPPP TLHCEGTEINS(1)DDEQESK T(-146.43)LHCEGT(-84.94)EINS(84.94)DDEQES(-154.36)K 11 3 0.46252 25947 0 0 23138 0 0 25725 0 0 22795 0 0 23871 0 0 24558 0 0 25866 0 0 28941 0 0 25390 0 0 141450 0 0 24552 0 0 21855 0 0 25897 0 0 23454 0 0 24362 0 0 24858 0 0 26220 0 0 33122 0 0 25073 0 0 133860 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 190750000 190750000 0 0 NaN 3307 1799 674 674 4768;4769 5085;5086 5418;5419 6024;6025;6026 5418 6024 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9966 5419 6025 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14425 5419 6025 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14425 Q9BQ52 199 Q9BQ52 Q9BQ52 Zinc phosphodiesterase ELAC protein 2 ELAC2 sp|Q9BQ52|RNZ2_HUMAN Zinc phosphodiesterase ELAC protein 2 OS=Homo sapiens GN=ELAC2 PE=1 SV=2 0.999816 37.3476 0.028998 52.862 35.982 52.862 1 S PIHSEQRRGKHQPWQSPERPLSRLSPERSSD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPXXXXXXXX HQPWQS(1)PERPLSR HQPWQS(37.35)PERPLS(-37.35)R 6 3 0.33468 24264 0 0 17325 0 0 26645 0 0 17733 0 0 26765 0 0 26295 0 0 29068 0 0 26317 0 0 20528 0 0 5159.8 0 0 22968 0 0 16369 0 0 26699 0 0 18320 0 0 27179 0 0 25984 0 0 29244 0 0 26552 0 0 20617 0 0 5467.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 43208000 43208000 0 0 NaN 3308 1801 199 199 1736 1830 1975 2201 1975 2201 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10446 1975 2201 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10446 1975 2201 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10446 Q9BQ67 344 Q9BQ67 Q9BQ67 Glutamate-rich WD repeat-containing protein 1 GRWD1 sp|Q9BQ67|GRWD1_HUMAN Glutamate-rich WD repeat-containing protein 1 OS=Homo sapiens GN=GRWD1 PE=1 SV=1 0.597472 1.71522 0.000559917 108.3 86.793 108.3 1 S DGALKIWDLRQFKSGSPVATFKQHVAPVTSV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX S(0.403)GS(0.597)PVATFK S(-1.72)GS(1.72)PVAT(-57.24)FK 3 2 2.4879 31671 0 0 31930 0 0 30431 0 0 33278 0 0 31893 0 0 30844 0 0 32062 0 0 31524 0 0 36372 0 0 8946.1 0 0 29964 0 0 30171 0 0 30732 0 0 34047 0 0 32285 0 0 31050 0 0 32747 0 0 31864 0 0 35705 0 0 9153.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20901000 20901000 0 0 NaN 3309 1802 344 344 3814 4064 4336 4818 4336 4818 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13952 4336 4818 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13952 4336 4818 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13952 Q9BQC3 488 Q9BQC3 Q9BQC3 Diphthamide biosynthesis protein 2 DPH2 sp|Q9BQC3|DPH2_HUMAN Diphthamide biosynthesis protein 2 OS=Homo sapiens GN=DPH2 PE=1 SV=1 1 128.661 3.16027E-07 158.47 150.66 158.47 1 S VSGRRGIAIAYEDEGSG______________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPXXXXXXXXXXXXXX GIAIAYEDEGS(1)G GIAIAY(-128.66)EDEGS(128.66)G 11 2 -0.32005 8598.3 0 0 11637 0 0 10085 0 0 10405 0 0 9277.3 0 0 10526 0 0 8580.2 0 0 8896.8 0 0 10064 0 0 17986 0 0 8141.7 0 0 10986 0 0 10058 0 0 10761 0 0 9453.9 0 0 10558 0 0 8808 0 0 9529.2 0 0 9866.8 0 0 17141 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15568000 15568000 0 0 NaN 3310 1804 488 488 1467 1544 1666 1846 1666 1846 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17303 1666 1846 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17303 1666 1846 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17303 Q9BQF6 11 Q9BQF6 Q9BQF6 Sentrin-specific protease 7 SENP7 sp|Q9BQF6|SENP7_HUMAN Sentrin-specific protease 7 OS=Homo sapiens GN=SENP7 PE=1 SV=4 0.877395 9.05483 1.56895E-07 163.45 97.182 163.45 1 S _____MDKRKLGRRPSSSEIITEGKRKKSSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX RPS(0.877)S(0.109)S(0.014)EIITEGK RPS(9.05)S(-9.05)S(-18.12)EIIT(-85.72)EGK 3 3 -0.15315 12059 0 0 11224 0 0 12807 0 0 12395 0 0 12802 0 0 12637 0 0 13968 0 0 12717 0 0 13107 0 0 3028.1 0 0 11414 0 0 10609 0 0 12855 0 0 12659 0 0 13007 0 0 12663 0 0 14138 0 0 12845 0 0 12970 0 0 3145.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22579000 22579000 0 0 NaN 3311 1806 11 11 3414 3626 3868 4294 3868 4294 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12089 3868 4294 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12089 3868 4294 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12089 Q9BQG0 1303 Q9BQG0 Q9BQG0 Myb-binding protein 1A MYBBP1A sp|Q9BQG0|MBB1A_HUMAN Myb-binding protein 1A OS=Homo sapiens GN=MYBBP1A PE=1 SV=2 1 70.8081 0.0166099 70.808 19.372 70.808 1 S GKSPLSALARKKARLSLVIRSPSLLQSGAKK X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX ARLS(1)LVIR ARLS(70.81)LVIR 4 2 -0.083575 15266 0 0 10544 0 0 13525 0 0 10087 0 0 9331.1 0 0 16488 0 0 11366 0 0 11829 0 0 10450 0 0 6504.8 0 0 14439 0 0 9957.8 0 0 13672 0 0 10487 0 0 9744.8 0 0 16195 0 0 11447 0 0 12242 0 0 10350 0 0 6398.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14050000 14050000 0 0 NaN 3312 1807 1303 1303 420;2563 449;2707 484 540 484 540 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16607 484 540 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16607 484 540 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16607 Q9BQG0 11 Q9BQG0 Q9BQG0 Myb-binding protein 1A MYBBP1A sp|Q9BQG0|MBB1A_HUMAN Myb-binding protein 1A OS=Homo sapiens GN=MYBBP1A PE=1 SV=2 0.999999 61.4912 6.34492E-27 266.39 225.63 266.39 1 S _____MESRDPAQPMSPGEATQSGARPADRY X;X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPPPX DPAQPMS(1)PGEATQSGAR DPAQPMS(61.49)PGEAT(-61.49)QS(-104.14)GAR 7 2 -0.4765 5340.1 0 0 5240.2 0 0 4510.7 0 0 5605.5 0 0 4563.1 0 0 4155.2 0 0 3378 0 0 5270.2 0 0 5527.2 0 0 2366.7 0 0 5050 0 0 4952.3 0 0 4588.1 0 0 5709.9 0 0 4612.8 0 0 4248.2 0 0 3554.3 0 0 5314.5 0 0 5362.5 0 0 2350.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7704300 7704300 0 0 NaN 3313 1807 11 11 774;775 821;822 876;877 967;968 876 967 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9845 876 967 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9845 876 967 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9845 Q9BQG0 1163 Q9BQG0 Q9BQG0 Myb-binding protein 1A MYBBP1A sp|Q9BQG0|MBB1A_HUMAN Myb-binding protein 1A OS=Homo sapiens GN=MYBBP1A PE=1 SV=2 0.99996 44.6868 1.83225E-07 159.02 124.84 159.02 1 S KLEKKDAKEIPSATQSPISKKRKKKGFLPET X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX EIPSATQS(1)PISK EIPS(-78.91)AT(-52.41)QS(44.69)PIS(-44.69)K 8 3 0.062383 24744 0 0 21140 0 0 22056 0 0 17627 0 0 10747 0 0 24149 0 0 12479 0 0 18965 0 0 20034 0 0 2422.1 0 0 23404 0 0 19951 0 0 22228 0 0 18418 0 0 11606 0 0 23854 0 0 12827 0 0 19297 0 0 19447 0 0 2719.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 151190000 151190000 0 0 NaN 3314 1807 1163 1163 997 1052 1138 1255 1138 1255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13862 1138 1255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13862 1138 1255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13862 Q9BQG0 1308 Q9BQG0 Q9BQG0 Myb-binding protein 1A MYBBP1A sp|Q9BQG0|MBB1A_HUMAN Myb-binding protein 1A OS=Homo sapiens GN=MYBBP1A PE=1 SV=2 0.738368 6.35698 0.038741 47.472 31.947 47.472 1 S SALARKKARLSLVIRSPSLLQSGAKKKAQVR X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPXXXXXX LS(0.171)LVIRS(0.738)PS(0.091)LLQSGAK LS(-6.36)LVIRS(6.36)PS(-9.11)LLQS(-35.26)GAK 7 3 2.0898 7949.6 0 0 12343 0 0 8119.7 0 0 15137 0 0 9437.4 0 0 8146.6 0 0 10427 0 0 11247 0 0 15533 0 0 28691 0 0 7523 0 0 11676 0 0 8184.3 0 0 15260 0 0 9518.1 0 0 8570.6 0 0 10706 0 0 12025 0 0 15110 0 0 27277 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8377000 8377000 0 0 NaN 3315 1807 1308 1308 2563;4177 2707;4452 2905 3239 2905 3239 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21392 2905 3239 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21392 2905 3239 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21392 Q9BQG0 1310 Q9BQG0 Q9BQG0 Myb-binding protein 1A MYBBP1A sp|Q9BQG0|MBB1A_HUMAN Myb-binding protein 1A OS=Homo sapiens GN=MYBBP1A PE=1 SV=2 0.995945 24.3796 2.29433E-06 154.74 108.77 154.74 1 S LARKKARLSLVIRSPSLLQSGAKKKAQVRKA X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX S(0.004)PS(0.996)LLQSGAK S(-24.38)PS(24.38)LLQS(-33.73)GAK 3 2 0.81342 47595 0 0 31406 0 0 49440 0 0 28885 0 0 35132 0 0 49385 0 0 39774 0 0 38563 0 0 29891 0 0 13073 0 0 45044 0 0 29654 0 0 49511 0 0 30141 0 0 36553 0 0 48475 0 0 39993 0 0 39495 0 0 29913 0 0 13203 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 50278000 50278000 0 0 NaN 3316 1807 1310 1310 2563;4177 2707;4452 4745 5264 4745 5264 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14185 4745 5264 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14185 4745 5264 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14185 Q9BQG0 1267 Q9BQG0 Q9BQG0 Myb-binding protein 1A MYBBP1A sp|Q9BQG0|MBB1A_HUMAN Myb-binding protein 1A OS=Homo sapiens GN=MYBBP1A PE=1 SV=2 0.989416 19.7074 1.02188E-11 200.12 173.28 200.12 1 S QKKNQKPSQVNGAPGSPTEPAGQKQHQKALP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPXXXXXXX NQKPSQVNGAPGS(0.989)PT(0.011)EPAGQK NQKPS(-68.75)QVNGAPGS(19.71)PT(-19.71)EPAGQK 13 3 -0.49781 17346 0 0 15681 0 0 19182 0 0 15055 0 0 6987 0 0 19394 0 0 8395.2 0 0 13985 0 0 18516 0 0 3955.9 0 0 16421 0 0 14810 0 0 19063 0 0 15565 0 0 7840 0 0 19185 0 0 8755.1 0 0 14356 0 0 17841 0 0 4048.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23634000 23634000 0 0 NaN 3317 1807 1267 1267 2893 3067 3285 3642 3285 3642 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9280 3285 3642 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9280 3285 3642 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9280 Q9BQG0 1290 Q9BQG0 Q9BQG0 Myb-binding protein 1A MYBBP1A sp|Q9BQG0|MBB1A_HUMAN Myb-binding protein 1A OS=Homo sapiens GN=MYBBP1A PE=1 SV=2 0.995107 23.0832 0.0149453 77.049 15.959 77.049 1 S KQHQKALPKKGVLGKSPLSALARKKARLSLV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX S(0.995)PLS(0.005)ALAR S(23.08)PLS(-23.08)ALAR 1 2 2.1809 9942.7 0 0 10789 0 0 9774 0 0 13143 0 0 6460.1 0 0 8899.1 0 0 6344.8 0 0 9781.6 0 0 11981 0 0 4600.9 0 0 9407.7 0 0 10205 0 0 9810.8 0 0 13283 0 0 6755.1 0 0 9129.1 0 0 6618.3 0 0 9916 0 0 11582 0 0 4558.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7366300 7366300 0 0 NaN 3318 1807 1290 1290 4130 4403 4694 5210 4694 5210 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15691 4694 5210 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15691 4694 5210 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15691 Q9BQS7 1145 Q9BQS7 Q9BQS7 Hephaestin HEPH sp|Q9BQS7|HEPH_HUMAN Hephaestin OS=Homo sapiens GN=HEPH PE=2 SV=3 0.980249 16.9574 0.00114831 111.73 35.269 111.73 1 S VWYQHRQRKLRRNRRSILDDSFKLLSFKQ__ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX S(0.98)ILDDS(0.02)FK S(16.96)ILDDS(-16.96)FK 1 2 0.46698 11774 0 0 40811 0 0 12052 0 0 40575 0 0 49421 0 0 11428 0 0 49823 0 0 35792 0 0 42259 0 0 22856 0 0 11142 0 0 38551 0 0 12578 0 0 41207 0 0 47945 0 0 13104 0 0 50489 0 0 35646 0 0 42018 0 0 22350 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 88680000 88680000 0 0 NaN 3319 1808 1145 1145 3845 4098 4373 4863;4864 4373 4863 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19363 4373 4863 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19363 4373 4863 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19363 Q9BRD0 271 Q9BRD0 Q9BRD0 BUD13 homolog BUD13 sp|Q9BRD0|BUD13_HUMAN BUD13 homolog OS=Homo sapiens GN=BUD13 PE=1 SV=1 1 118.291 5.35313E-11 190.61 173.92 190.61 1 S LGSSDTQQLRRARHDSPDLAPNVTYSLPRTK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPXX ARHDS(1)PDLAPNVTYSLPR ARHDS(118.29)PDLAPNVT(-118.29)Y(-141.7)S(-143.14)LPR 5 3 -0.46319 26190 0 0 29336 0 0 31038 0 0 30184 0 0 30913 0 0 29823 0 0 32171 0 0 31225 0 0 32827 0 0 28599 0 0 24801 0 0 27718 0 0 30975 0 0 30935 0 0 31396 0 0 29981 0 0 32705 0 0 32128 0 0 32363 0 0 27652 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 58966000 58966000 0 0 NaN 3320 1810 271 271 418;1702 447;1795 482;1939 537;538;2161 482 538 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14430 482 538 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14430 482 538 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14430 Q9BRD0 358 Q9BRD0 Q9BRD0 BUD13 homolog BUD13 sp|Q9BRD0|BUD13_HUMAN BUD13 homolog OS=Homo sapiens GN=BUD13 PE=1 SV=1 0.994329 22.439 1.78762E-06 159.44 113.45 159.44 1 S DSKGDCQKATDSDLSSPRHKQSPGHQDSDSD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX ATDSDLS(0.006)S(0.994)PR AT(-99.1)DS(-67.74)DLS(-22.44)S(22.44)PR 8 2 -0.47176 15421 0 0 13189 0 0 14037 0 0 11688 0 0 12089 0 0 14853 0 0 12357 0 0 14357 0 0 13304 0 0 4104.8 0 0 14587 0 0 12450 0 0 14190 0 0 12144 0 0 12388 0 0 14749 0 0 12592 0 0 14544 0 0 13087 0 0 4197.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27016000 27016000 0 0 NaN 3321 1810 358 358 521 554 594 661 594 661 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7452 594 661 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7452 594 661 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7452 Q9BRD0 163 Q9BRD0 Q9BRD0 BUD13 homolog BUD13 sp|Q9BRD0|BUD13_HUMAN BUD13 homolog OS=Homo sapiens GN=BUD13 PE=1 SV=1 1 130.565 0.000161328 130.56 98.344 130.56 2 S PDPSPRRARHDTPDPSPLRGARHDSDTSPPR X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX HDT(1)PDPS(1)PLR HDT(130.56)PDPS(130.56)PLR 7 2 -0.55705 0 29048 0 0 27407 0 0 27854 0 0 29018 0 0 27895 0 0 31124 0 0 25880 0 0 29400 0 0 30547 0 0 9319.9 0 0 27482 0 0 25900 0 0 28113 0 0 29730 0 0 28281 0 0 31099 0 0 26568 0 0 29838 0 0 29943 0 0 9456.2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 41588000 0 41588000 0 NaN 3322 1810 163 163 1705 1798 1942 2164;2165 1942 2164 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8451 1942 2164 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8451 1942 2164 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8451 Q9BRD0 248 Q9BRD0 Q9BRD0 BUD13 homolog BUD13 sp|Q9BRD0|BUD13_HUMAN BUD13 homolog OS=Homo sapiens GN=BUD13 PE=1 SV=1 0.98158 20.2767 0.0255093 56.569 32.144 56.569 1 S HGSSDISSPRRVHNNSPDTSRRTLGSSDTQQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX VHNNS(0.982)PDT(0.009)S(0.009)RR VHNNS(20.28)PDT(-20.28)S(-20.28)RR 5 3 -0.18376 387.69 0 0 393.18 0 0 696.3 0 0 694.82 0 0 720.99 0 0 930.5 0 0 794.01 0 0 1413 0 0 685.15 0 0 2866.6 0 0 366.89 0 0 370.64 0 0 683.83 0 0 698.79 0 0 731.14 0 0 933.62 0 0 801.75 0 0 1485 0 0 680.65 0 0 2732 0 0 1 0 0 1 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 3939400 3939400 0 0 NaN 3323 1810 248 248 3543;5131 3761;5468 4007;5824 4447;6475 5824 6475 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4558 5824 6475 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4558 5824 6475 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4558 Q9BRD0 325 Q9BRD0 Q9BRD0 BUD13 homolog BUD13 sp|Q9BRD0|BUD13_HUMAN BUD13 homolog OS=Homo sapiens GN=BUD13 PE=1 SV=1 1 97.8672 3.69842E-07 166.24 151.57 166.24 1 S LSFPKNSKYEYDPDISPPRKKQAKSHFGDKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX YEYDPDIS(1)PPR Y(-113.65)EY(-97.87)DPDIS(97.87)PPR 8 2 -0.9686 12627 0 0 14966 0 0 14575 0 0 15752 0 0 15637 0 0 15512 0 0 16674 0 0 16454 0 0 15547 0 0 20379 0 0 11956 0 0 14143 0 0 14579 0 0 16122 0 0 15820 0 0 15609 0 0 16892 0 0 17083 0 0 15389 0 0 19570 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19067000 19067000 0 0 NaN 3324 1810 325 325 5370 5720 6099 6778 6099 6778 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15494 6099 6778 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15494 6099 6778 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15494 Q9BRL6 273 Q9BRL6 Q9BRL6 Serine/arginine-rich splicing factor 8 SRSF8 sp|Q9BRL6|SRSF8_HUMAN Serine/arginine-rich splicing factor 8 OS=Homo sapiens GN=SRSF8 PE=1 SV=1 0.999997 54.5976 0.00441799 91.64 82.224 91.64 2 S KRKSKSRSRSKRPPKSPEEEGQMSS______ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPXXXXXX RPPKS(1)PEEEGQMS(0.003)S(0.997) RPPKS(54.6)PEEEGQMS(-25)S(25) 5 3 -0.0019434 0 8712.7 0 0 13178 0 0 8775.2 0 0 12606 0 0 14835 0 0 8637.2 0 0 14371 0 0 12653 0 0 15301 0 0 3574.1 0 0 8244.7 0 0 12445 0 0 8905.8 0 0 12915 0 0 14691 0 0 8891.8 0 0 14677 0 0 12644 0 0 15058 0 0 3658.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 14298000 0 14298000 0 NaN 3325 1811 273 273 3397 3609 3850 4275 3850 4275 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8548 3850 4275 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8548 3850 4275 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8548 Q9BRL6 282 Q9BRL6 Q9BRL6 Serine/arginine-rich splicing factor 8 SRSF8 sp|Q9BRL6|SRSF8_HUMAN Serine/arginine-rich splicing factor 8 OS=Homo sapiens GN=SRSF8 PE=1 SV=1 0.99685 25.0033 0.00441799 91.64 82.224 91.64 2 S SKRPPKSPEEEGQMSS_______________ X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPXXXXXXXXXXXXXXX RPPKS(1)PEEEGQMS(0.003)S(0.997) RPPKS(54.6)PEEEGQMS(-25)S(25) 14 3 -0.0019434 0 8712.7 0 0 13178 0 0 8775.2 0 0 12606 0 0 14835 0 0 8637.2 0 0 14371 0 0 12653 0 0 15301 0 0 3574.1 0 0 8244.7 0 0 12445 0 0 8905.8 0 0 12915 0 0 14691 0 0 8891.8 0 0 14677 0 0 12644 0 0 15058 0 0 3658.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 14298000 0 14298000 0 NaN 3326 1811 282 282 3397 3609 3850 4275 3850 4275 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8548 3850 4275 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8548 3850 4275 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8548 Q9BRP1 20 Q9BRP1 Q9BRP1 Programmed cell death protein 2-like PDCD2L sp|Q9BRP1|PDD2L_HUMAN Programmed cell death protein 2-like OS=Homo sapiens GN=PDCD2L PE=1 SV=1 0.996971 25.174 5.77409E-11 189.09 167.53 189.09 1 S LKPVLLGLRDAPVHGSPTGPGAWTASKLGGI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPXXXX DAPVHGS(0.997)PT(0.003)GPGAWTASK DAPVHGS(25.17)PT(-25.17)GPGAWT(-132.63)AS(-149.3)K 7 3 -0.27314 10741 0 0 15808 0 0 11916 0 0 14928 0 0 11023 0 0 11574 0 0 9581.4 0 0 11581 0 0 17369 0 0 12041 0 0 10168 0 0 14928 0 0 11918 0 0 15328 0 0 11226 0 0 11774 0 0 10035 0 0 11979 0 0 16807 0 0 11606 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13252000 13252000 0 0 NaN 3327 1812 20 20 640 682 727 807 727 807 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13606 727 807 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13606 727 807 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13606 Q9BRR9 500 Q9BRR9 Q9BRR9 Rho GTPase-activating protein 9 ARHGAP9 sp|Q9BRR9|RHG09_HUMAN Rho GTPase-activating protein 9 OS=Homo sapiens GN=ARHGAP9 PE=1 SV=2 0.835899 7.07193 0.0103615 83.776 67.638 83.776 1 S ELVSKPLLRLSSRRSSIRGPEGTEQNRVRNK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX RS(0.164)S(0.836)IRGPEGTEQNR RS(-7.07)S(7.07)IRGPEGT(-41.71)EQNR 3 3 0.10965 5201.2 0 0 1484.3 0 0 5101 0 0 1549.1 0 0 4768 0 0 4892.2 0 0 5930.9 0 0 3969.8 0 0 1999.8 0 0 1473.7 0 0 4921.2 0 0 1402.5 0 0 5140.3 0 0 1640.4 0 0 4871 0 0 4745.7 0 0 5873.6 0 0 4062.1 0 0 2139.9 0 0 1479.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18295000 18295000 0 0 NaN 3328 1814 500 500 3496 3713 3959 4397 3959 4397 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5640 3959 4397 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5640 3959 4397 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5640 Q9BRR9 203 Q9BRR9 Q9BRR9 Rho GTPase-activating protein 9 ARHGAP9 sp|Q9BRR9|RHG09_HUMAN Rho GTPase-activating protein 9 OS=Homo sapiens GN=ARHGAP9 PE=1 SV=2 1 60.7167 0.0297478 60.717 24.322 60.717 1 S PPVYCNLVDLRRCPRSPPPGPACPLLQRLDA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX S(1)PPPGPACPLLQR S(60.72)PPPGPACPLLQR 1 2 0.40279 9620.5 0 0 6220.2 0 0 8323.1 0 0 5935.3 0 0 8659.5 0 0 9888.1 0 0 9523.2 0 0 8867 0 0 8823.3 0 0 23190 0 0 9098.6 0 0 5874.4 0 0 8461.3 0 0 6175.1 0 0 8779.4 0 0 9765.8 0 0 9633.1 0 0 9632.6 0 0 8735.6 0 0 22042 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6768200 6768200 0 0 NaN 3329 1814 203 203 4145 4418 4709 5226 4709 5226 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15432 4709 5226 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15432 4709 5226 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15432 Q9BRZ2 475 Q9BRZ2 Q9BRZ2 E3 ubiquitin-protein ligase TRIM56 TRIM56 sp|Q9BRZ2|TRI56_HUMAN E3 ubiquitin-protein ligase TRIM56 OS=Homo sapiens GN=TRIM56 PE=1 SV=3 1 108.791 7.34269E-06 134.87 112.83 134.87 1 S KKKFKGRLKSISREPSPALGPNLDGSGLLPR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP EPS(1)PALGPNLDGSGLLPR EPS(108.79)PALGPNLDGS(-108.79)GLLPR 3 3 0.62506 4290.3 0 0 5064.6 0 0 2955.9 0 0 4465.4 0 0 3798.8 0 0 3292.1 0 0 4541.6 0 0 4624.8 0 0 5697.4 0 0 13770 0 0 4054.7 0 0 4781 0 0 3064.9 0 0 4602.7 0 0 3816.9 0 0 3394.9 0 0 4619 0 0 5002.2 0 0 5572.6 0 0 13073 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9634100 9634100 0 0 NaN 3330 1815 475 475 1092 1150 1238 1362 1238 1362 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20656 1238 1362 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20656 1238 1362 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20656 Q9BSL1 98 Q9BSL1 Q9BSL1 Ubiquitin-associated domain-containing protein 1 UBAC1 sp|Q9BSL1|UBAC1_HUMAN Ubiquitin-associated domain-containing protein 1 OS=Homo sapiens GN=UBAC1 PE=1 SV=1 1 95.6181 0.00327808 95.618 36.076 95.618 1 S IQDQDVLLLIKKRAPSPLPKMADVSAEEKKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX RAPS(1)PLPK RAPS(95.62)PLPK 4 3 0.44162 28497 0 0 198480 0 0 34199 0 0 187890 0 0 61254 0 0 27287 0 0 55672 0 0 94668 0 0 195920 0 0 5732.4 0 0 26987 0 0 187430 0 0 34429 0 0 190980 0 0 60617 0 0 35375 0 0 60778 0 0 92520 0 0 187360 0 0 7588.7 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 362790000 362790000 0 0 NaN 3331 1817 98 98 371;3184 397;3377 431;3609 479;4000 3609 4000 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9990 3609 4000 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9990 3609 4000 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9990 Q9BSQ5 384 Q9BSQ5 Q9BSQ5 Cerebral cavernous malformations 2 protein CCM2 sp|Q9BSQ5|CCM2_HUMAN Malcavernin OS=Homo sapiens GN=CCM2 PE=1 SV=1 0.98408 17.9108 0.0108549 91.752 64.448 91.752 1 S LETIGVKDGRGIITDSFGRHRRALSTTSSST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX GIIT(0.016)DS(0.984)FGR GIIT(-17.91)DS(17.91)FGR 6 2 -0.67263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3332 1818 384 384 1469 1546 1668 1848 1668 1848 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16355 1668 1848 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16355 1668 1848 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16355 Q9BT23 29 Q9BT23 Q9BT23 LIM domain-containing protein 2 LIMD2 sp|Q9BT23|LIMD2_HUMAN LIM domain-containing protein 2 OS=Homo sapiens GN=LIMD2 PE=1 SV=1 0.992803 23.1893 0.00275094 97.456 34.633 97.456 1 S HDAKGGGSSTVQRSKSFSLRAQVKETCAACQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX S(0.005)KS(0.993)FS(0.002)LR S(-23.19)KS(23.19)FS(-26.11)LR 3 3 0.00063322 49532 0 0 5905.4 0 0 49851 0 0 6086.5 0 0 62328 0 0 46490 0 0 65849 0 0 40980 0 0 4975.9 0 0 1493.5 0 0 46871 0 0 5579.7 0 0 50338 0 0 6887.6 0 0 62506 0 0 44730 0 0 65192 0 0 41364 0 0 7491.6 0 0 2354.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 105440000 105440000 0 0 NaN 3333 1820 29 29 3899 4155 4434 4928 4434 4928 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12773 4434 4928 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12773 4434 4928 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12773 Q9BTA9 53 Q9BTA9 Q9BTA9 WW domain-containing adapter protein with coiled-coil WAC sp|Q9BTA9|WAC_HUMAN WW domain-containing adapter protein with coiled-coil OS=Homo sapiens GN=WAC PE=1 SV=3 1 79.492 0.0252694 79.492 60.71 79.492 1 S SGDHRHEKMRDAGDPSPPNKMLRRSDSPENK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX DAGDPS(1)PPNK DAGDPS(79.49)PPNK 6 2 -3.5968 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3334 1821 53 53 635 677 722 802 722 802 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8512 722 802 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8512 722 802 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8512 Q9BTA9 511 Q9BTA9 Q9BTA9 WW domain-containing adapter protein with coiled-coil WAC sp|Q9BTA9|WAC_HUMAN WW domain-containing adapter protein with coiled-coil OS=Homo sapiens GN=WAC PE=1 SV=3 1 79.3371 9.10769E-25 259.76 231.87 79.337 1 S QQPVTADKQQGHEPVSPRSLQRSSSQRSPSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX QQGHEPVS(1)PR QQGHEPVS(79.34)PR 8 3 -0.83433 15336 0 0 13968 0 0 14740 0 0 12180 0 0 16039 0 0 15504 0 0 14240 0 0 14919 0 0 14914 0 0 10381 0 0 14509 0 0 13185 0 0 14889 0 0 12668 0 0 16175 0 0 15404 0 0 14600 0 0 15300 0 0 14687 0 0 10120 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 23685000 23685000 0 0 NaN 3335 1821 511 511 3035;3113 3217;3302 3440;3532 3813;3915 3532 3915 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5554 3440 3813 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9440 3440 3813 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9440 Q9BTA9 64 Q9BTA9 Q9BTA9 WW domain-containing adapter protein with coiled-coil WAC sp|Q9BTA9|WAC_HUMAN WW domain-containing adapter protein with coiled-coil OS=Homo sapiens GN=WAC PE=1 SV=3 0.999601 33.9863 7.34507E-05 136.94 102.41 136.94 1 S AGDPSPPNKMLRRSDSPENKYSDSTGHSKAK X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX RSDS(1)PENK RS(-33.99)DS(33.99)PENK 4 3 0.57013 12032 0 0 11140 0 0 12462 0 0 11240 0 0 9218.6 0 0 10921 0 0 9803.7 0 0 11737 0 0 11949 0 0 2414.5 0 0 11387 0 0 10524 0 0 12485 0 0 11530 0 0 9556.9 0 0 10975 0 0 10010 0 0 11814 0 0 11699 0 0 2545.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13893000 13893000 0 0 NaN 3336 1821 64 64 3466 3682 3928 4363 3928 4363 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5537 3928 4363 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5537 3928 4363 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5537 Q9BTC0 1456 Q9BTC0 Q9BTC0 Death-inducer obliterator 1 DIDO1 sp|Q9BTC0|DIDO1_HUMAN Death-inducer obliterator 1 OS=Homo sapiens GN=DIDO1 PE=1 SV=5 1 94.4517 2.08199E-12 204.53 181.08 204.53 1 S VDDLPNRMCADVRRNSVERPAEPVAGAATPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RNS(1)VERPAEPVAGAATPSLVEQQK RNS(94.45)VERPAEPVAGAAT(-94.45)PS(-123.54)LVEQQK 3 3 0.21509 37089 0 0 22070 0 0 41679 0 0 20100 0 0 28865 0 0 41397 0 0 27797 0 0 30475 0 0 23090 0 0 61511 0 0 35113 0 0 20838 0 0 41545 0 0 21101 0 0 30029 0 0 40523 0 0 28217 0 0 32845 0 0 22982 0 0 58625 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 186530000 186530000 0 0 NaN 3337 1822 1456 1456 3370 3577 3816;3817 4238;4239 3817 4239 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13101 3817 4239 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13101 3817 4239 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13101 Q9BTC0 1040 Q9BTC0 Q9BTC0 Death-inducer obliterator 1 DIDO1 sp|Q9BTC0|DIDO1_HUMAN Death-inducer obliterator 1 OS=Homo sapiens GN=DIDO1 PE=1 SV=5 0.999725 37.1262 0.000350276 101.88 65.185 101.88 1 S LSVPPSPNISTSESRSPPEGDTTLFLSRLST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX S(1)PPEGDTTLFLSR S(37.13)PPEGDT(-37.13)T(-40.91)LFLS(-82.51)R 1 2 0.36129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3338 1822 1040 1040 4138 4411 4702 5218 4702 5218 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18247 4702 5218 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18247 4702 5218 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18247 Q9BTC0 523 Q9BTC0 Q9BTC0 Death-inducer obliterator 1 DIDO1 sp|Q9BTC0|DIDO1_HUMAN Death-inducer obliterator 1 OS=Homo sapiens GN=DIDO1 PE=1 SV=5 0.9349 11.573 1.29479E-06 141.73 99.332 141.73 1 S DHNYNAVKPEKTAAPSPSLLYKSTKEDRRSE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX TAAPS(0.935)PS(0.065)LLYK T(-47.32)AAPS(11.57)PS(-11.57)LLY(-76.89)K 5 2 0.54935 12277 0 0 11919 0 0 15118 0 0 12820 0 0 8375.2 0 0 13382 0 0 11023 0 0 13101 0 0 12481 0 0 22239 0 0 11628 0 0 11264 0 0 14982 0 0 13117 0 0 8936.1 0 0 13427 0 0 11133 0 0 13822 0 0 12253 0 0 21244 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8440800 8440800 0 0 NaN 3339 1822 523 523 4605 4911 5231 5809 5231 5809 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18096 5231 5809 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18096 5231 5809 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18096 Q9BTE3 298 Q9BTE3 Q9BTE3 Mini-chromosome maintenance complex-binding protein MCMBP sp|Q9BTE3|MCMBP_HUMAN Mini-chromosome maintenance complex-binding protein OS=Homo sapiens GN=MCMBP PE=1 SV=2 1 64.0615 6.72804E-08 173.06 141 173.06 1 S DPMECTDTAEEQRVHSPPASLVPRIHVILAQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX VHS(1)PPASLVPR VHS(64.06)PPAS(-64.06)LVPR 3 3 -0.1312 8981.6 0 0 7612.6 0 0 8096.1 0 0 8296.2 0 0 7554.5 0 0 8670.3 0 0 9324.1 0 0 9624.7 0 0 7995.9 0 0 2238.7 0 0 8495.6 0 0 7195.3 0 0 8199.9 0 0 8482.6 0 0 7722.1 0 0 8690.2 0 0 9369.7 0 0 9684.7 0 0 7945.9 0 0 2330.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 40971000 40971000 0 0 NaN 3340 1823 298 298 5133 5470 5826 6477 5826 6477 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12817 5826 6477 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12817 5826 6477 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12817 Q9BTE3 154 Q9BTE3 Q9BTE3 Mini-chromosome maintenance complex-binding protein MCMBP sp|Q9BTE3|MCMBP_HUMAN Mini-chromosome maintenance complex-binding protein OS=Homo sapiens GN=MCMBP PE=1 SV=2 0.966008 14.8939 1.24708E-10 206.21 167.85 206.21 1 S TWVKEAYVNANQARVSPSTSYTPSRHKRSYE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPXXXXXX VS(0.966)PS(0.031)T(0.003)SYTPSR VS(14.89)PS(-14.89)T(-25.58)S(-47.2)Y(-112.51)T(-81.87)PS(-122.56)R 2 2 -2.2792 89267 0 0 47083 0 0 82410 0 0 49232 0 0 57919 0 0 91717 0 0 56360 0 0 64838 0 0 51727 0 0 7475.5 0 0 84444 0 0 44490 0 0 83074 0 0 51102 0 0 60196 0 0 89714 0 0 57317 0 0 66305 0 0 51235 0 0 8539.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 172310000 172310000 0 0 NaN 3341 1823 154 154 5268 5614 5985 6650 5985 6650 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9777 5985 6650 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9777 5985 6650 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9777 Q9BTK6 237 Q9BTK6 Q9BTK6 PAXIP1-associated glutamate-rich protein 1 PAGR1 sp|Q9BTK6|PAGR1_HUMAN PAXIP1-associated glutamate-rich protein 1 OS=Homo sapiens GN=PAGR1 PE=1 SV=1 0.999118 30.5408 1.04262E-05 133.21 112.77 133.21 1 S GRDLFSLDSEDPSPASPPLRSSGSSLFPRQR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPXXXXXXXXXXX DLFSLDSEDPS(0.001)PAS(0.999)PPLR DLFS(-102.39)LDS(-84.98)EDPS(-30.54)PAS(30.54)PPLR 14 3 -0.43632 3880.3 0 0 4878.5 0 0 4406.2 0 0 4891.6 0 0 5453.2 0 0 5081.1 0 0 4759.2 0 0 5519.5 0 0 5256.4 0 0 12790 0 0 3673.7 0 0 4608.7 0 0 4418.1 0 0 5024.7 0 0 5462.8 0 0 5114.1 0 0 4891.4 0 0 5904.8 0 0 5165.4 0 0 12171 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 36624000 36624000 0 0 NaN 3342 1824 237 237 736 780 831 918 831 918 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22137 831 918 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22137 831 918 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22137 Q9BTL3 86 Q9BTL3 Q9BTL3 RNMT-activating mini protein FAM103A1 sp|Q9BTL3|RAM_HUMAN RNMT-activating mini protein OS=Homo sapiens GN=FAM103A1 PE=1 SV=1 0.999969 45.1174 0.025087 78.157 60.831 78.157 1 S WGWPSDNRSNQWHGRSWGNNYPQHRQEPYYP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPXXXXXX S(1)WGNNYPQHR S(45.12)WGNNY(-45.12)PQHR 1 3 0.71694 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3343 1825 86 86 4587 4892 5212 5787 5212 5787 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9593 5212 5787 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9593 5212 5787 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9593 Q9BTU6 464 Q9BTU6 Q9BTU6 Phosphatidylinositol 4-kinase type 2-alpha PI4K2A sp|Q9BTU6|P4K2A_HUMAN Phosphatidylinositol 4-kinase type 2-alpha OS=Homo sapiens GN=PI4K2A PE=1 SV=1 0.883263 8.82966 7.69217E-11 201.48 151.99 201.48 1 S VIVETARSHQRSSSESYTQSFQSRKPFFSWW X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPXXXXXXX SS(0.001)S(0.116)ES(0.883)YTQSFQSR S(-46.09)S(-30.53)S(-8.83)ES(8.83)Y(-88.76)T(-34.86)QS(-70.42)FQS(-143.38)R 5 2 0.41813 43418 0 0 22379 0 0 44541 0 0 23815 0 0 23134 0 0 46435 0 0 23197 0 0 31147 0 0 25239 0 0 6939.9 0 0 41089 0 0 21149 0 0 44524 0 0 24729 0 0 24743 0 0 45356 0 0 23665 0 0 32045 0 0 24816 0 0 7255.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 47287000 47287000 0 0 NaN 3344 1827 464 464 4418 4707 5011 5559 5011 5559 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10709 5011 5559 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10709 5011 5559 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10709 Q9BTU6 47 Q9BTU6 Q9BTU6 Phosphatidylinositol 4-kinase type 2-alpha PI4K2A sp|Q9BTU6|P4K2A_HUMAN Phosphatidylinositol 4-kinase type 2-alpha OS=Homo sapiens GN=PI4K2A PE=1 SV=1 0.992624 21.2893 8.52439E-05 106.11 94.051 106.11 2 S PGGAVRVAAAAGSGPSPPGSPGHDRERQPLL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPXXXXXX VAAAAGS(0.007)GPS(0.993)PPGS(1)PGHDR VAAAAGS(-21.29)GPS(21.29)PPGS(46.57)PGHDR 10 3 -0.46927 0 11160 0 0 10493 0 0 13095 0 0 10360 0 0 12839 0 0 11643 0 0 12791 0 0 12864 0 0 11964 0 0 5257.1 0 0 10568 0 0 9911.7 0 0 13072 0 0 10666 0 0 13043 0 0 11639 0 0 13000 0 0 13015 0 0 11840 0 0 5247.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 40857000 0 40857000 0 NaN 3345 1827 47 47 5037 5371 5723 6362 5723 6362 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8675 5723 6362 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8675 5723 6362 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8675 Q9BTU6 51 Q9BTU6 Q9BTU6 Phosphatidylinositol 4-kinase type 2-alpha PI4K2A sp|Q9BTU6|P4K2A_HUMAN Phosphatidylinositol 4-kinase type 2-alpha OS=Homo sapiens GN=PI4K2A PE=1 SV=1 0.999978 46.5722 8.52439E-05 106.11 94.051 106.11 2 S VRVAAAAGSGPSPPGSPGHDRERQPLLDRAR X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPXXXXXXXXXX VAAAAGS(0.007)GPS(0.993)PPGS(1)PGHDR VAAAAGS(-21.29)GPS(21.29)PPGS(46.57)PGHDR 14 3 -0.46927 0 11160 0 0 10493 0 0 13095 0 0 10360 0 0 12839 0 0 11643 0 0 12791 0 0 12864 0 0 11964 0 0 5257.1 0 0 10568 0 0 9911.7 0 0 13072 0 0 10666 0 0 13043 0 0 11639 0 0 13000 0 0 13015 0 0 11840 0 0 5247.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 40857000 0 40857000 0 NaN 3346 1827 51 51 5037 5371 5723 6362 5723 6362 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8675 5723 6362 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8675 5723 6362 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8675 Q9BTV6 353 Q9BTV6 Q9BTV6 Diphthine methyltransferase DPH7 sp|Q9BTV6|DPH7_HUMAN Diphthine methyltransferase OS=Homo sapiens GN=DPH7 PE=1 SV=2 0.633297 2.37294 7.97111E-11 192.78 152.5 192.78 1 S ADWSWLLFRSLQRAPSWSFPSNLGTKTADLK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX APS(0.633)WS(0.367)FPSNLGTK APS(2.37)WS(-2.37)FPS(-101.12)NLGT(-172.4)K 3 3 -0.14521 5091.7 0 0 5582.8 0 0 5912.7 0 0 5446.4 0 0 5129.1 0 0 5022.7 0 0 5193.7 0 0 5355.5 0 0 6456.1 0 0 7290 0 0 4821.2 0 0 5273.1 0 0 5897.1 0 0 5593.7 0 0 5253.4 0 0 5071.3 0 0 5318.2 0 0 5578.7 0 0 6316.7 0 0 6988.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27739000 27739000 0 0 NaN 3347 1828 353 353 379 405 440 489 440 489 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21270 440 489 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21270 440 489 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21270 Q9BU19 231 Q9BU19 Q9BU19 Zinc finger protein 692 ZNF692 sp|Q9BU19|ZN692_HUMAN Zinc finger protein 692 OS=Homo sapiens GN=ZNF692 PE=1 SV=1 0.997057 25.2996 5.64955E-05 126.83 111.86 126.83 1 S SSPDDSEPDAPRLLPSPVTCTPKEGETPPAP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX LLPS(0.997)PVT(0.003)CTPK LLPS(25.3)PVT(-25.3)CT(-76.74)PK 4 3 0.20524 10249 0 0 5593.9 0 0 10554 0 0 5391.9 0 0 3987.2 0 0 10499 0 0 3923.4 0 0 5612.7 0 0 5042.1 0 0 3836.2 0 0 9699.2 0 0 5283.2 0 0 10529 0 0 5630.7 0 0 4434.1 0 0 10241 0 0 4027.4 0 0 5934.8 0 0 4927.6 0 0 3742.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29415000 29415000 0 0 NaN 3348 1830 231 231 2451 2589 2783 3110 2783 3110 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18682 2783 3110 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18682 2783 3110 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18682 Q9BU76 217 Q9BU76 Q9BU76 Multiple myeloma tumor-associated protein 2 MMTAG2 sp|Q9BU76|MMTA2_HUMAN Multiple myeloma tumor-associated protein 2 OS=Homo sapiens GN=MMTAG2 PE=1 SV=1 0.747823 6.12052 0.0150994 67.396 48.347 67.396 2 S KKKDKEHRRPAEATSSPTSPERPRHHHHDSD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPXXXXXXX RPAEAT(0.047)S(0.186)S(0.748)PT(0.057)S(0.961)PERPR RPAEAT(-12.06)S(-6.12)S(6.12)PT(-14.36)S(14.36)PERPR 8 3 -0.16457 0 5548.1 0 0 6274.4 0 0 5461.3 0 0 5806.1 0 0 5728.2 0 0 5873.9 0 0 4745.7 0 0 5181.8 0 0 6985.5 0 0 3493.2 0 0 5249.6 0 0 5924.6 0 0 5505.7 0 0 5991.2 0 0 5785.5 0 0 5882.6 0 0 4939.3 0 0 5329.8 0 0 6797.6 0 0 3409.2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 19816000 0 19816000 0 NaN 3349 1831 217 217 3374 3581;3582 3822 4244;4245 3822 4244 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5850 3822 4244 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5850 3822 4244 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5850 Q9BU76 220 Q9BU76 Q9BU76 Multiple myeloma tumor-associated protein 2 MMTAG2 sp|Q9BU76|MMTA2_HUMAN Multiple myeloma tumor-associated protein 2 OS=Homo sapiens GN=MMTAG2 PE=1 SV=1 0.961105 14.3597 2.49339E-10 176.44 144.62 67.396 1;2 S DKEHRRPAEATSSPTSPERPRHHHHDSDSNS X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPXXXXXXXXXX RPAEAT(0.047)S(0.186)S(0.748)PT(0.057)S(0.961)PERPR RPAEAT(-12.06)S(-6.12)S(6.12)PT(-14.36)S(14.36)PERPR 11 3 -0.16457 13053 5548.1 0 13877 6274.4 0 12822 5461.3 0 13782 5806.1 0 13383 5728.2 0 13236 5873.9 0 16124 4745.7 0 14516 5181.8 0 14587 6985.5 0 2837.6 3493.2 0 12350 5249.6 0 13109 5924.6 0 12936 5505.7 0 14148 5991.2 0 13585 5785.5 0 13313 5882.6 0 16239 4939.3 0 14597 5329.8 0 14459 6797.6 0 3007.9 3409.2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 148880000 129060000 19816000 0 NaN 3350 1831 220 220 3374 3581;3582 3821;3822 4243;4244;4245 3822 4244 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5850 3821 4243 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5708 3821 4243 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5708 Q9BU76 155 Q9BU76 Q9BU76 Multiple myeloma tumor-associated protein 2 MMTAG2 sp|Q9BU76|MMTA2_HUMAN Multiple myeloma tumor-associated protein 2 OS=Homo sapiens GN=MMTAG2 PE=1 SV=1 0.954638 13.8155 0.0259051 62.69 46.847 62.69 1 S AAKLGLSVFTHHRVESGGPGTSAASARRKPR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX VES(0.955)GGPGT(0.04)S(0.006)AASAR VES(13.82)GGPGT(-13.82)S(-22.28)AAS(-41.58)AR 3 2 -3.3256 34088 0 0 19974 0 0 36325 0 0 18419 0 0 22088 0 0 33373 0 0 23443 0 0 26915 0 0 23024 0 0 8093.8 0 0 32264 0 0 18860 0 0 36276 0 0 19247 0 0 23274 0 0 32718 0 0 23787 0 0 27492 0 0 22735 0 0 8244.2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 10077000 10077000 0 0 NaN 3351 1831 155 155 5102 5439 5793 6441;6442 5793 6441 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7381 5793 6441 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7381 5793 6441 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7381 Q9BUA3 308 Q9BUA3 Q9BUA3 Uncharacterized protein C11orf84 C11orf84 sp|Q9BUA3|CK084_HUMAN Uncharacterized protein C11orf84 OS=Homo sapiens GN=C11orf84 PE=1 SV=3 0.997821 26.607 3.51257E-07 164 90.498 164 1 S PKDREVAEGGLPRAESPSPAPPPGLRGTLDL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX AES(0.998)PS(0.002)PAPPPGLR AES(26.61)PS(-26.61)PAPPPGLR 3 2 -0.22908 19398 0 0 21266 0 0 20157 0 0 20688 0 0 23124 0 0 19428 0 0 24010 0 0 23910 0 0 22361 0 0 19704 0 0 18359 0 0 20086 0 0 20291 0 0 21257 0 0 23302 0 0 19623 0 0 24352 0 0 24404 0 0 22133 0 0 19107 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37198000 37198000 0 0 NaN 3352 1832 308 308 161 168 181 205 181 205 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11268 181 205 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11268 181 205 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11268 Q9BUA3 82 Q9BUA3 Q9BUA3 Uncharacterized protein C11orf84 C11orf84 sp|Q9BUA3|CK084_HUMAN Uncharacterized protein C11orf84 OS=Homo sapiens GN=C11orf84 PE=1 SV=3 0.97234 18.0445 1.82497E-11 199.17 188.54 199.17 1 S PKQQVSWEQEFLVGSSPGGSGRALCMVCGAE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPPXXXXXXXXX QQVSWEQEFLVGS(0.012)S(0.972)PGGS(0.015)GR QQVS(-160.65)WEQEFLVGS(-18.94)S(18.04)PGGS(-18.04)GR 14 3 -1.0667 4196 0 0 5793.3 0 0 4835.6 0 0 6236.8 0 0 4955 0 0 4815.6 0 0 4045 0 0 5402.7 0 0 5626.3 0 0 20617 0 0 3972.9 0 0 5475.3 0 0 4832.1 0 0 6353.8 0 0 5009.9 0 0 4936.6 0 0 4204.5 0 0 6017.8 0 0 5484.4 0 0 19539 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 45044000 45044000 0 0 NaN 3353 1832 82 82 3123 3313 3543 3927 3543 3927 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21002 3543 3927 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21002 3543 3927 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21002 Q9BUH6 152 Q9BUH6 Q9BUH6 Protein PAXX C9orf142 sp|Q9BUH6|PAXX_HUMAN Protein PAXX OS=Homo sapiens GN=C9orf142 PE=1 SV=2 1 97.1245 0.00164431 97.124 80.986 97.124 1 S RRLAAAEETAVSPRKSPRPAGPQLFLPDPDP X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP KS(1)PRPAGPQLFLPDPDPQR KS(97.12)PRPAGPQLFLPDPDPQR 2 4 1.8212 15006 0 0 10738 0 0 13468 0 0 16446 0 0 13981 0 0 16055 0 0 14559 0 0 13561 0 0 14361 0 0 6585 0 0 14193 0 0 10176 0 0 13658 0 0 16531 0 0 14166 0 0 16091 0 0 14787 0 0 13897 0 0 14179 0 0 6514.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 40501000 40501000 0 0 NaN 3354 1833 152 152 2221 2347 2528 2823 2528 2823 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17259 2528 2823 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17259 2528 2823 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17259 Q9BUH6 148 Q9BUH6 Q9BUH6 Protein PAXX C9orf142 sp|Q9BUH6|PAXX_HUMAN Protein PAXX OS=Homo sapiens GN=C9orf142 PE=1 SV=2 1 72.8968 8.48398E-11 189.61 154.43 189.61 1 S WSLERRLAAAEETAVSPRKSPRPAGPQLFLP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPXXXXXXXXXXXXX LAAAEETAVS(1)PR LAAAEET(-72.9)AVS(72.9)PR 10 2 0.12852 64094 0 0 38445 0 0 66207 0 0 36845 0 0 47401 0 0 67603 0 0 49519 0 0 50881 0 0 35282 0 0 29059 0 0 60657 0 0 36309 0 0 66319 0 0 38424 0 0 49230 0 0 66234 0 0 49915 0 0 52561 0 0 35416 0 0 28541 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 255590000 255590000 0 0 NaN 3355 1833 148 148 2280;3308 2409;3509 2592;3746 2897;4162 2592 2897 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12637 2592 2897 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12637 2592 2897 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12637 Q9BUI4 204 Q9BUI4 Q9BUI4 DNA-directed RNA polymerase III subunit RPC3 POLR3C sp|Q9BUI4|RPC3_HUMAN DNA-directed RNA polymerase III subunit RPC3 OS=Homo sapiens GN=POLR3C PE=1 SV=1 0.987649 19.0291 1.15191E-14 215.14 178.72 215.14 1 S LVPKLSLIGKGKRRRSSDEDAAGEPKAKRPK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPXXXXX S(0.988)S(0.012)DEDAAGEPK S(19.03)S(-19.03)DEDAAGEPK 1 2 0.1861 26051 0 0 20346 0 0 26525 0 0 19454 0 0 18892 0 0 25797 0 0 18130 0 0 21163 0 0 19573 0 0 3329.5 0 0 24653 0 0 19215 0 0 26587 0 0 20131 0 0 19613 0 0 25523 0 0 18531 0 0 21508 0 0 19251 0 0 3624.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20305000 20305000 0 0 NaN 3356 1834 204 204 3455;4328 3671;4614 4916 5460 4916 5460 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7760 4916 5460 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7760 4916 5460 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7760 Q9BUI4 205 Q9BUI4 Q9BUI4 DNA-directed RNA polymerase III subunit RPC3 POLR3C sp|Q9BUI4|RPC3_HUMAN DNA-directed RNA polymerase III subunit RPC3 OS=Homo sapiens GN=POLR3C PE=1 SV=1 0.62594 2.23592 0.000145369 118.96 89.275 118.96 1 S VPKLSLIGKGKRRRSSDEDAAGEPKAKRPKY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX RRS(0.374)S(0.626)DEDAAGEPK RRS(-2.24)S(2.24)DEDAAGEPK 4 3 -0.0019886 9024.7 0 0 7377.4 0 0 8016.9 0 0 6211.1 0 0 6385.3 0 0 8240.6 0 0 6668.4 0 0 7342.5 0 0 6681 0 0 2505.4 0 0 8535.9 0 0 6962.5 0 0 8111 0 0 6481.1 0 0 6580.2 0 0 8162.8 0 0 6774.6 0 0 7475.4 0 0 6591.7 0 0 2529.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14933000 14933000 0 0 NaN 3357 1834 205 205 3455;4328 3671;4614 3916 4351 3916 4351 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5701 3916 4351 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5701 3916 4351 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5701 Q9BUQ8 14 Q9BUQ8 Q9BUQ8 Probable ATP-dependent RNA helicase DDX23 DDX23 sp|Q9BUQ8|DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 OS=Homo sapiens GN=DDX23 PE=1 SV=3 0.999777 36.5162 4.02463E-06 147.55 113.67 105.46 1 S __MAGELADKKDRDASPSKEERKRSRTPDRE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX DRDAS(1)PSKEER DRDAS(36.52)PS(-36.52)KEER 5 3 -0.40271 60049 0 0 67756 0 0 62263 0 0 72539 0 0 74830 0 0 59898 0 0 73371 0 0 72389 0 0 76314 0 0 6765.9 0 0 56830 0 0 64034 0 0 62719 0 0 73986 0 0 75177 0 0 60772 0 0 74836 0 0 72331 0 0 75174 0 0 8046.3 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 273700000 273700000 0 0 NaN 3358 1835 14 14 645;784 687;832 732;888 812;979 888 979 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5329 732 812 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5892 732 812 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5892 Q9BUQ8 107 Q9BUQ8 Q9BUQ8 Probable ATP-dependent RNA helicase DDX23 DDX23 sp|Q9BUQ8|DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 OS=Homo sapiens GN=DDX23 PE=1 SV=3 0.880948 8.6672 0.018351 61.167 43.679 61.167 2 S RDKDGHRRDKDRKRSSLSPGRGKDFKSRKDR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX KRS(0.124)S(0.881)LS(0.995)PGR KRS(-8.67)S(8.67)LS(22.4)PGR 4 3 0.33922 0 33202 0 0 31928 0 0 34865 0 0 35711 0 0 32481 0 0 34288 0 0 35652 0 0 33071 0 0 35837 0 0 4502.8 0 0 31424 0 0 30183 0 0 34988 0 0 36414 0 0 33147 0 0 34425 0 0 36143 0 0 33356 0 0 35353 0 0 5005.4 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 48956000 0 48956000 0 NaN 3359 1835 107 107 2205 2331 2512 2804;2805 2512 2805 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6711 2512 2805 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6711 2512 2805 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6711 Q9BUQ8 109 Q9BUQ8 Q9BUQ8 Probable ATP-dependent RNA helicase DDX23 DDX23 sp|Q9BUQ8|DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 OS=Homo sapiens GN=DDX23 PE=1 SV=3 0.994958 22.3987 0.018351 61.167 43.679 61.167 2 S KDGHRRDKDRKRSSLSPGRGKDFKSRKDRDS X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX KRS(0.124)S(0.881)LS(0.995)PGR KRS(-8.67)S(8.67)LS(22.4)PGR 6 3 0.33922 0 33202 0 0 31928 0 0 34865 0 0 35711 0 0 32481 0 0 34288 0 0 35652 0 0 33071 0 0 35837 0 0 4502.8 0 0 31424 0 0 30183 0 0 34988 0 0 36414 0 0 33147 0 0 34425 0 0 36143 0 0 33356 0 0 35353 0 0 5005.4 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 48956000 0 48956000 0 NaN 3360 1835 109 109 2205 2331 2512 2804;2805 2512 2805 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6711 2512 2805 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6711 2512 2805 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6711 Q9BUQ8 38 Q9BUQ8 Q9BUQ8 Probable ATP-dependent RNA helicase DDX23 DDX23 sp|Q9BUQ8|DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 OS=Homo sapiens GN=DDX23 PE=1 SV=3 0.498147 0 0.0147553 76.326 41.794 76.326 S SRTPDRERDRDRDRKSSPSKDRKRHRSRDRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPXXXXXXXXX KS(0.498)S(0.498)PS(0.004)KDR KS(0)S(0)PS(-21.29)KDR 2 3 -0.38961 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3361 1835 38 38 2233;4399 2361;4687 2542 2839 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5700 2542 2839 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5700 2542 2839 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5700 Q9BUQ8 39 Q9BUQ8 Q9BUQ8 Probable ATP-dependent RNA helicase DDX23 DDX23 sp|Q9BUQ8|DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 OS=Homo sapiens GN=DDX23 PE=1 SV=3 0.864753 8.05836 0.00846775 89.355 8.0584 89.355 1 S RTPDRERDRDRDRKSSPSKDRKRHRSRDRRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPXXXXXXXXXX S(0.135)S(0.865)PSKDR S(-8.06)S(8.06)PS(-45.91)KDR 2 2 0.70651 2161.5 0 0 2974.7 0 0 2761.1 0 0 2698.3 0 0 3083 0 0 2222.2 0 0 2780 0 0 2586.3 0 0 3036 0 0 2312.5 0 0 2047.6 0 0 2808.5 0 0 2749.2 0 0 2779.7 0 0 3105.6 0 0 2257.6 0 0 2851.4 0 0 2649.8 0 0 2984.8 0 0 2237.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 2967400 2967400 0 0 NaN 3362 1835 39 39 2233;4399 2361;4687 4991 5538 4991 5538 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5241 4991 5538 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5241 4991 5538 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5241 Q9BUR4 90 Q9BUR4 Q9BUR4 Telomerase Cajal body protein 1 WRAP53 sp|Q9BUR4|WAP53_HUMAN Telomerase Cajal body protein 1 OS=Homo sapiens GN=WRAP53 PE=1 SV=1 0.962691 14.6409 1.22768E-12 204.99 172.91 204.99 1 S LSTPLETEFGSPSELSPRIEEQELSENTSLP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX EGDPVSLSTPLETEFGS(0.004)PS(0.033)ELS(0.963)PR EGDPVS(-153.16)LS(-146.91)T(-138.98)PLET(-77.82)EFGS(-23.56)PS(-14.64)ELS(14.64)PR 22 3 -0.55363 2424.1 0 0 2912.5 0 0 3018.7 0 0 3280 0 0 2445.3 0 0 1891.7 0 0 2585.1 0 0 4027.5 0 0 2583.5 0 0 21287 0 0 2296 0 0 2753.4 0 0 2998.7 0 0 3323.1 0 0 2517.4 0 0 2025 0 0 2624.7 0 0 4598.6 0 0 2549.2 0 0 20138 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9820300 9820300 0 0 NaN 3363 1836 90 90 951 1005 1090 1203 1090 1203 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22464 1090 1203 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22464 1090 1203 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22464 Q9BUR4 54 Q9BUR4 Q9BUR4 Telomerase Cajal body protein 1 WRAP53 sp|Q9BUR4|WAP53_HUMAN Telomerase Cajal body protein 1 OS=Homo sapiens GN=WRAP53 PE=1 SV=1 1 80.4807 2.84774E-08 167.06 142.76 167.06 1 S ELMPPPPERGDPPRLSPDPVAGSAVSQELRE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPPPX GDPPRLS(1)PDPVAGSAVSQELR GDPPRLS(80.48)PDPVAGS(-80.48)AVS(-109.16)QELR 7 3 -0.71743 14289 0 0 31597 0 0 16858 0 0 26983 0 0 28658 0 0 16012 0 0 28261 0 0 26761 0 0 32614 0 0 81472 0 0 13530 0 0 29822 0 0 16971 0 0 27810 0 0 28384 0 0 16827 0 0 28906 0 0 28882 0 0 31995 0 0 77335 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 47312000 47312000 0 0 NaN 3364 1836 54 54 1392 1468 1577 1741;1742 1577 1741 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16317 1577 1741 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16317 1577 1741 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16317 Q9BUT9 80 Q9BUT9 Q9BUT9 Protein FAM195A FAM195A sp|Q9BUT9|F195A_HUMAN Protein FAM195A OS=Homo sapiens GN=FAM195A PE=1 SV=2 0.478326 2.19027 1.15156E-17 221.23 201.04 221.23 S RLVFNRVNGRRAPSTSPSFEGTQETYTVAHE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP RAPS(0.116)T(0.116)S(0.478)PS(0.289)FEGTQETYTVAHEENVR RAPS(-6.14)T(-6.14)S(2.19)PS(-2.19)FEGT(-63.81)QET(-131.44)Y(-166.17)T(-168.51)VAHEENVR 6 4 -0.9705 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3365 1837 80 80 3186 3379 3611 4002 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12155 3611 4002 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12155 3611 4002 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12155 Q9BV40 55 Q9BV40 Q9BV40 Vesicle-associated membrane protein 8 VAMP8 sp|Q9BV40|VAMP8_HUMAN Vesicle-associated membrane protein 8 OS=Homo sapiens GN=VAMP8 PE=1 SV=1 0.92948 11.1993 3.85519E-06 138.08 118.25 138.08 1 S NLEHLRNKTEDLEATSEHFKTTSQKVARKFW X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPXXXXXXXXXXX NKTEDLEAT(0.071)S(0.929)EHFK NKT(-79.99)EDLEAT(-11.2)S(11.2)EHFK 10 3 0.44359 16780 0 0 7510 0 0 19457 0 0 8844.4 0 0 11552 0 0 17353 0 0 10578 0 0 12781 0 0 9444.5 0 0 8541.9 0 0 15888 0 0 7102 0 0 19340 0 0 9136.4 0 0 12175 0 0 16973 0 0 10784 0 0 13255 0 0 9367 0 0 8339 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11341000 11341000 0 0 NaN 3366 1838 55 55 2842 3012 3226 3581 3226 3581 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12505 3226 3581 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12505 3226 3581 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12505 Q9BV73 2322 Q9BV73 Q9BV73 Centrosome-associated protein CEP250 CEP250 sp|Q9BV73|CP250_HUMAN Centrosome-associated protein CEP250 OS=Homo sapiens GN=CEP250 PE=1 SV=2 0.998052 27.0962 0.0532172 49.333 28.386 49.333 1 S RRKLKREAMRAAQAGSLEISKATASSPTQQD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX AAQAGS(0.998)LEIS(0.002)K AAQAGS(27.1)LEIS(-27.1)K 6 2 -0.34301 19006 0 0 14747 0 0 19813 0 0 16814 0 0 15751 0 0 19886 0 0 14659 0 0 18081 0 0 16369 0 0 26999 0 0 17988 0 0 13943 0 0 19852 0 0 17187 0 0 16210 0 0 19823 0 0 15021 0 0 19020 0 0 16079 0 0 25841 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13630000 13630000 0 0 NaN 3367 1839 2322 2322 55 59 64 76 64 76 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13752 64 76 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13752 64 76 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13752 Q9BVG4 181 Q9BVG4 Q9BVG4 Protein PBDC1 PBDC1 sp|Q9BVG4|PBDC1_HUMAN Protein PBDC1 OS=Homo sapiens GN=PBDC1 PE=1 SV=1 0.999999 58.6294 0.000187081 104.45 69.567 104.45 1 S EGEKGVNNGGEKRADSGEEENTKNGGEKGAD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX RADS(1)GEEENTK RADS(58.63)GEEENT(-58.63)K 4 3 -0.5025 6945 0 0 8599.4 0 0 7423 0 0 7314.5 0 0 9385.4 0 0 7458.3 0 0 10083 0 0 8521.5 0 0 8660 0 0 3020 0 0 6573.6 0 0 8116.2 0 0 7472.4 0 0 7591 0 0 9417 0 0 7488.4 0 0 10191 0 0 8597.5 0 0 8605.2 0 0 3040.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12273000 12273000 0 0 NaN 3368 1841 181 181 118;3179 124;3372 133;3604 148;3994 3604 3994 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5769 3604 3994 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5769 3604 3994 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5769 Q9BVG9 16 Q9BVG9 Q9BVG9 Phosphatidylserine synthase 2 PTDSS2 sp|Q9BVG9|PTSS2_HUMAN Phosphatidylserine synthase 2 OS=Homo sapiens GN=PTDSS2 PE=1 SV=1 1 53.0333 0.0491932 53.033 42.217 53.033 1 S MRRGERRDAGGPRPESPVPAGRASLEEPPDG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPXXXXXXXXX RDAGGPRPES(1)PVPAGR RDAGGPRPES(53.03)PVPAGR 10 3 0.16407 5809.8 0 0 5592.5 0 0 4720 0 0 5291.5 0 0 4931.1 0 0 4555 0 0 4912.2 0 0 5052.6 0 0 5688.3 0 0 2898.3 0 0 5493.4 0 0 5281.3 0 0 4817.9 0 0 5439.7 0 0 4992 0 0 4610.3 0 0 5022.4 0 0 5136.2 0 0 5579.7 0 0 2846 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7221300 7221300 0 0 NaN 3369 1842 16 16 3205 3399 3633 4029 3633 4029 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6089 3633 4029 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6089 3633 4029 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6089 Q9BVI0 159 Q9BVI0 Q9BVI0 PHD finger protein 20 PHF20 sp|Q9BVI0|PHF20_HUMAN PHD finger protein 20 OS=Homo sapiens GN=PHF20 PE=1 SV=2 0.742759 8.79883 0.0250116 56.087 13.751 56.087 1 S GNARPKETDHKSLSSSPDKREKFKEQRKATV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX S(0.098)LS(0.098)S(0.061)S(0.743)PDKR S(-8.8)LS(-8.8)S(-10.83)S(8.8)PDKR 5 3 -0.70301 21662 0 0 23508 0 0 24956 0 0 22788 0 0 21725 0 0 25011 0 0 22060 0 0 24021 0 0 25362 0 0 4422.8 0 0 20510 0 0 22203 0 0 24901 0 0 23477 0 0 22245 0 0 24966 0 0 22529 0 0 24267 0 0 24885 0 0 4720.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23025000 23025000 0 0 NaN 3370 1843 159 159 4004 4269 4557 5065 4557 5065 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7489 4557 5065 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7489 4557 5065 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7489 Q9BVI0 518 Q9BVI0 Q9BVI0 PHD finger protein 20 PHF20 sp|Q9BVI0|PHF20_HUMAN PHD finger protein 20 OS=Homo sapiens GN=PHF20 PE=1 SV=2 0.450941 0 0.000164765 130.09 93.851 130.09 S DKPSQETLTRKRVSASSPTTKDKEKNKEKKF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX VSAS(0.451)S(0.451)PT(0.096)T(0.002)K VS(-39.13)AS(0)S(0)PT(-6.71)T(-23.93)K 4 2 0.97956 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3371 1843 518 518 5239 5584 5952 6616 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8702 5952 6616 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8702 5952 6616 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8702 Q9BVI0 519 Q9BVI0 Q9BVI0 PHD finger protein 20 PHF20 sp|Q9BVI0|PHF20_HUMAN PHD finger protein 20 OS=Homo sapiens GN=PHF20 PE=1 SV=2 0.450941 0 0.000164765 130.09 93.851 130.09 S KPSQETLTRKRVSASSPTTKDKEKNKEKKFK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VSAS(0.451)S(0.451)PT(0.096)T(0.002)K VS(-39.13)AS(0)S(0)PT(-6.71)T(-23.93)K 5 2 0.97956 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3372 1843 519 519 5239 5584 5952 6616 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8702 5952 6616 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8702 5952 6616 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8702 Q9BVJ6 453 Q9BVJ6 Q9BVJ6 U3 small nucleolar RNA-associated protein 14 homolog A UTP14A sp|Q9BVJ6|UT14A_HUMAN U3 small nucleolar RNA-associated protein 14 homolog A OS=Homo sapiens GN=UTP14A PE=1 SV=1 0.973543 15.6694 0.019257 66.674 52.268 66.674 1 S QDAEPAGSQETKDSGSQEVLSELRVLSQKLK X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX DS(0.026)GS(0.974)QEVLSELR DS(-15.67)GS(15.67)QEVLS(-41.55)ELR 4 2 0.3621 15041 0 0 19502 0 0 14436 0 0 17842 0 0 17469 0 0 15599 0 0 18733 0 0 17084 0 0 17683 0 0 19546 0 0 14231 0 0 18414 0 0 14611 0 0 18384 0 0 17565 0 0 15791 0 0 18979 0 0 17668 0 0 17493 0 0 18800 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15447000 15447000 0 0 NaN 3373 1844 453 453 808 856 912 1004 912 1004 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15952 912 1004 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15952 912 1004 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15952 Q9BVJ6 445 Q9BVJ6 Q9BVJ6 U3 small nucleolar RNA-associated protein 14 homolog A UTP14A sp|Q9BVJ6|UT14A_HUMAN U3 small nucleolar RNA-associated protein 14 homolog A OS=Homo sapiens GN=UTP14A PE=1 SV=1 0.9998 37.0111 5.96254E-07 139.44 119.35 139.44 1 S LRKRSELSQDAEPAGSQETKDSGSQEVLSEL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPXXXXXXXXXXX SELSQDAEPAGS(1)QETK S(-74.26)ELS(-60.74)QDAEPAGS(37.01)QET(-37.01)K 12 3 0.15472 12736 0 0 12211 0 0 14039 0 0 13053 0 0 10851 0 0 14520 0 0 11373 0 0 14329 0 0 14085 0 0 6073.9 0 0 12056 0 0 11540 0 0 14024 0 0 13375 0 0 11210 0 0 14498 0 0 11626 0 0 14563 0 0 13783 0 0 6050.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17038000 17038000 0 0 NaN 3374 1844 445 445 3691 3926 4186 4652 4186 4652 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10710 4186 4652 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10710 4186 4652 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10710 Q9BVS4 350 Q9BVS4 Q9BVS4 Serine/threonine-protein kinase RIO2 RIOK2 sp|Q9BVS4|RIOK2_HUMAN Serine/threonine-protein kinase RIO2 OS=Homo sapiens GN=RIOK2 PE=1 SV=2 0.99983 37.6979 3.31992E-16 235.95 220.13 235.95 1 S SFSDGEVAEKAEVYGSENESERNCLEESEGC X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX AEVYGS(1)ENESER AEVY(-128.84)GS(37.7)ENES(-37.7)ER 6 2 -0.0657 33479 0 0 134310 0 0 31378 0 0 124740 0 0 32939 0 0 28700 0 0 38320 0 0 66477 0 0 145610 0 0 10382 0 0 31672 0 0 126830 0 0 31746 0 0 127120 0 0 33511 0 0 33548 0 0 41686 0 0 65530 0 0 139120 0 0 11314 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 79655000 79655000 0 0 NaN 3375 1846 350 350 171 179 192 216;217 192 217 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8285 192 217 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8285 192 217 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8285 Q9BVS4 337 Q9BVS4 Q9BVS4 Serine/threonine-protein kinase RIO2 RIOK2 sp|Q9BVS4|RIOK2_HUMAN Serine/threonine-protein kinase RIO2 OS=Homo sapiens GN=RIOK2 PE=1 SV=2 0.997364 25.8258 2.13019E-05 134.08 116.16 134.08 1 S DDKNIETKEGSEFSFSDGEVAEKAEVYGSEN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X XXXXXXXXPPPPPPPPPPPPPPPXXXXXXXX EGSEFS(0.003)FS(0.997)DGEVAEK EGS(-45.44)EFS(-25.83)FS(25.83)DGEVAEK 8 3 -0.30488 6423.5 0 0 7402.4 0 0 6477.9 0 0 7787.6 0 0 8299.2 0 0 7648.8 0 0 6485.2 0 0 6604 0 0 6516.2 0 0 35949 0 0 6078.5 0 0 6995 0 0 6538.6 0 0 7970.4 0 0 8288.9 0 0 7727.6 0 0 6689.3 0 0 7748 0 0 6428.2 0 0 34003 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7517500 7517500 0 0 NaN 3376 1846 337 337 975 1029 1115 1230 1115 1230 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17931 1115 1230 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17931 1115 1230 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17931 Q9BVW5 222 Q9BVW5 Q9BVW5 TIMELESS-interacting protein TIPIN sp|Q9BVW5|TIPIN_HUMAN TIMELESS-interacting protein OS=Homo sapiens GN=TIPIN PE=1 SV=2 0.699974 4.90064 5.0706E-05 111.53 86.747 111.53 1 S KQLALERRQAKLLSNSQTLGNDMLMNTPRAH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPXX LLS(0.226)NS(0.7)QT(0.074)LGNDMLMNTPR LLS(-4.9)NS(4.9)QT(-9.78)LGNDMLMNT(-106.2)PR 5 3 3.4564 3642.4 0 0 3088.5 0 0 3566.4 0 0 3302.7 0 0 5981.6 0 0 4117 0 0 6003.6 0 0 4124.4 0 0 3111 0 0 21099 0 0 3446.4 0 0 2918.8 0 0 3625.2 0 0 3391.2 0 0 5925.2 0 0 4130.2 0 0 6030.8 0 0 4772.5 0 0 3192.3 0 0 19962 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9868400 9868400 0 0 NaN 3377 1847 222 222 2459 2597 2791 3118 2791 3118 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21921 2791 3118 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21921 2791 3118 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21921 Q9BW61 95 Q9BW61 Q9BW61 DET1- and DDB1-associated protein 1 DDA1 sp|Q9BW61|DDA1_HUMAN DET1- and DDB1-associated protein 1 OS=Homo sapiens GN=DDA1 PE=1 SV=1 0.999235 31.1614 1.96605E-09 179.72 175.31 179.72 1 S EGESSAPPRKVARTDSPDMHEDT________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX T(0.001)DS(0.999)PDMHEDT T(-31.16)DS(31.16)PDMHEDT(-71.46) 3 2 -0.42717 10715 0 0 11278 0 0 11798 0 0 10513 0 0 11527 0 0 11128 0 0 11145 0 0 11867 0 0 10823 0 0 3136.4 0 0 10143 0 0 10650 0 0 11813 0 0 10851 0 0 11708 0 0 11142 0 0 11354 0 0 11969 0 0 10693 0 0 3227.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13534000 13534000 0 0 NaN 3378 1848 95 95 4667 4978 5302 5890 5302 5890 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7176 5302 5890 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7176 5302 5890 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7176 Q9BW71 370 Q9BW71 Q9BW71 HIRA-interacting protein 3 HIRIP3 sp|Q9BW71|HIRP3_HUMAN HIRA-interacting protein 3 OS=Homo sapiens GN=HIRIP3 PE=1 SV=3 0.728379 4.28393 1.71097E-31 309.91 269.89 309.91 1 S LGSTSGEESDLEREVSDSEAGGGPQGERKNR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX EVS(0.728)DS(0.272)EAGGGPQGER EVS(4.28)DS(-4.28)EAGGGPQGER 3 2 -0.48873 8387.4 0 0 5616.3 0 0 8630.6 0 0 5753.5 0 0 9979 0 0 8702.9 0 0 10616 0 0 8272.6 0 0 6758.4 0 0 1639.2 0 0 7937.5 0 0 5306.3 0 0 8694.3 0 0 5946.6 0 0 10052 0 0 8589.4 0 0 10670 0 0 8364.1 0 0 6832.1 0 0 1735 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16140000 16140000 0 0 NaN 3379 1849 370 370 1219 1282 1381 1532 1381 1532 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6929 1381 1532 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6929 1381 1532 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6929 Q9BW71 125 Q9BW71 Q9BW71 HIRA-interacting protein 3 HIRIP3 sp|Q9BW71|HIRP3_HUMAN HIRA-interacting protein 3 OS=Homo sapiens GN=HIRIP3 PE=1 SV=3 1 173.654 3.83109E-08 173.65 156.08 173.65 1 S DYFGPPAKNGVAAEVSPAKEENPRRASKAVE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPXXXXXXX NGVAAEVS(1)PAKEENPR NGVAAEVS(173.65)PAKEENPR 8 3 -0.38622 17763 0 0 13936 0 0 19099 0 0 13789 0 0 21951 0 0 16443 0 0 24197 0 0 19004 0 0 13336 0 0 4889.1 0 0 16813 0 0 13164 0 0 19194 0 0 14210 0 0 22129 0 0 16405 0 0 24225 0 0 19110 0 0 13619 0 0 5043.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19831000 19831000 0 0 NaN 3380 1849 125 125 2818 2988 3201 3553 3201 3553 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9851 3201 3553 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9851 3201 3553 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9851 Q9BW71 87 Q9BW71 Q9BW71 HIRA-interacting protein 3 HIRIP3 sp|Q9BW71|HIRP3_HUMAN HIRA-interacting protein 3 OS=Homo sapiens GN=HIRIP3 PE=1 SV=3 1 55.0972 0.028937 55.097 49.627 55.097 2 S KLDLTKKGKRPPTPCSDPERKRFRFNSESES X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX RPPT(1)PCS(1)DPER RPPT(55.1)PCS(55.1)DPER 7 3 -1.8225 0 6153.2 0 0 6626.2 0 0 7234.8 0 0 7316.2 0 0 8856.9 0 0 6871.3 0 0 7590.5 0 0 7165.3 0 0 6860.9 0 0 2154.3 0 0 5826.6 0 0 6263.5 0 0 7240.3 0 0 7462.8 0 0 8873.7 0 0 6915 0 0 7767.3 0 0 7240.8 0 0 6800.6 0 0 2194.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 6451200 0 6451200 0 NaN 3381 1849 87 87 3400 3612 3853 4278 3853 4278 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6917 3853 4278 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6917 3853 4278 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6917 Q9BW71 227 Q9BW71 Q9BW71 HIRA-interacting protein 3 HIRIP3 sp|Q9BW71|HIRP3_HUMAN HIRA-interacting protein 3 OS=Homo sapiens GN=HIRIP3 PE=1 SV=3 0.998755 30.3184 0.00879198 77.689 55.848 77.689 1 S EGNKGTKSLKESEQESEEEILAQKKEQREEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPXXXXXX SLKES(0.001)EQES(0.999)EEEILAQKK S(-34.98)LKES(-30.32)EQES(30.32)EEEILAQKK 9 4 0.6149 8087.8 0 0 6444.2 0 0 8211.7 0 0 5558.5 0 0 7292.6 0 0 8753.9 0 0 6453.1 0 0 7594.8 0 0 7507.5 0 0 24961 0 0 7653.6 0 0 6082.5 0 0 8248.7 0 0 5812.7 0 0 7444 0 0 8664.3 0 0 6637.9 0 0 8415.1 0 0 7362.9 0 0 23679 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10707000 10707000 0 0 NaN 3382 1849 227 227 3945 4204 4486 4986 4486 4986 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15324 4486 4986 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15324 4486 4986 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15324 Q9BWF3 309 Q9BWF3 Q9BWF3 RNA-binding protein 4 RBM4 sp|Q9BWF3|RBM4_HUMAN RNA-binding protein 4 OS=Homo sapiens GN=RBM4 PE=1 SV=1 1 55.2486 0.0402599 55.249 25.494 55.249 1 S AAVTAASTSYYGRDRSPLRRATAPVPTVGEG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX DRS(1)PLRR DRS(55.25)PLRR 3 3 -0.13759 13327 0 0 17326 0 0 13670 0 0 16924 0 0 11709 0 0 12776 0 0 10904 0 0 14820 0 0 16750 0 0 4367.5 0 0 12612 0 0 16365 0 0 13720 0 0 17335 0 0 11992 0 0 13025 0 0 11298 0 0 14918 0 0 16279 0 0 4455.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 311060000 311060000 0 0 NaN 3383 1850 309 309 794 842 898 989 898 989 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5130 898 989 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5130 898 989 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5130 Q9BWF3 86 Q9BWF3 Q9BWF3 RNA-binding protein 4 RBM4 sp|Q9BWF3|RBM4_HUMAN RNA-binding protein 4 OS=Homo sapiens GN=RBM4 PE=1 SV=1 0.999983 47.7284 1.20606E-10 182.22 151.18 182.22 1 S KNKSKTSTKLHVGNISPTCTNKELRAKFEEY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPXXXXXXXXX LHVGNIS(1)PTCTNK LHVGNIS(47.73)PT(-47.73)CT(-91.12)NK 7 3 0.0076194 10922 0 0 16109 0 0 10430 0 0 16771 0 0 12900 0 0 10374 0 0 13085 0 0 14132 0 0 16180 0 0 4741.6 0 0 10333 0 0 15221 0 0 10561 0 0 17077 0 0 12951 0 0 10740 0 0 13395 0 0 14172 0 0 15834 0 0 4791.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 155670000 155670000 0 0 NaN 3384 1850 86 86 2400 2537 2730 3050 2730 3050 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13652 2730 3050 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13652 2730 3050 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13652 Q9BWG4 342 Q9BWG4 Q9BWG4 Single-stranded DNA-binding protein 4 SSBP4 sp|Q9BWG4|SSBP4_HUMAN Single-stranded DNA-binding protein 4 OS=Homo sapiens GN=SSBP4 PE=1 SV=1 0.693303 3.54213 1.00574E-41 351.2 300.92 351.2 1 S NGSLGSGDMDGLPKSSPGAVAGLSNAPGTPR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP S(0.307)S(0.693)PGAVAGLSNAPGTPR S(-3.54)S(3.54)PGAVAGLS(-144.67)NAPGT(-214.54)PR 2 2 0.13179 15635 0 0 21867 0 0 14470 0 0 21307 0 0 15304 0 0 13023 0 0 15491 0 0 17024 0 0 23168 0 0 8167.5 0 0 14790 0 0 20654 0 0 14648 0 0 21779 0 0 15492 0 0 13489 0 0 15970 0 0 17167 0 0 22534 0 0 8084.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37008000 37008000 0 0 NaN 3385 1851 342 342 4380 4667 4971 5516 4971 5516 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12872 4971 5516 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12872 4971 5516 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12872 Q9BWG6 183 Q9BWG6 Q9BWG6 Sodium channel modifier 1 SCNM1 sp|Q9BWG6|SCNM1_HUMAN Sodium channel modifier 1 OS=Homo sapiens GN=SCNM1 PE=1 SV=1 0.96408 14.2877 2.47447E-25 251.68 227.89 251.68 1 S PQAEESATVSAPAPMSPTRRRALDHYLTLRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX ISREPEPAAGPQAEESATVSAPAPMS(0.964)PT(0.036)R IS(-202.22)REPEPAAGPQAEES(-127.51)AT(-106.22)VS(-84.08)APAPMS(14.29)PT(-14.29)R 26 3 0.41311 8902 0 0 13045 0 0 10236 0 0 12520 0 0 8742.1 0 0 8839.9 0 0 7247.6 0 0 9572.1 0 0 14246 0 0 9699.1 0 0 8428.6 0 0 12320 0 0 10209 0 0 12828 0 0 8945.2 0 0 9052.4 0 0 7640.9 0 0 9865.4 0 0 13760 0 0 9354.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14125000 14125000 0 0 NaN 3386 1852 183 183 1948 2059 2222 2483 2222 2483 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13299 2222 2483 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13299 2222 2483 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13299 Q9BWH2 151 Q9BWH2 Q9BWH2 FUN14 domain-containing protein 2 FUNDC2 sp|Q9BWH2|FUND2_HUMAN FUN14 domain-containing protein 2 OS=Homo sapiens GN=FUNDC2 PE=1 SV=2 0.999997 55.9666 0.000143606 121.21 62.775 121.21 1 S EKDMKKAKEQLKIRKSNQIPTEVRSKAEEVV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX S(1)NQIPTEVR S(55.97)NQIPT(-55.97)EVR 1 2 -0.032209 101350 0 0 45489 0 0 97384 0 0 46250 0 0 31381 0 0 96025 0 0 33533 0 0 56927 0 0 47469 0 0 14932 0 0 95893 0 0 42976 0 0 97484 0 0 48242 0 0 35786 0 0 93567 0 0 34412 0 0 59067 0 0 46247 0 0 15377 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 227030000 227030000 0 0 NaN 3387 1853 151 151 1927;4048 2035;4317 2196;4606 2456;5116 4606 5116 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10651 4606 5116 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10651 2196 2456 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11009 Q9BWT3 525 Q9BWT3 Q9BWT3 Poly(A) polymerase gamma PAPOLG sp|Q9BWT3|PAPOG_HUMAN Poly(A) polymerase gamma OS=Homo sapiens GN=PAPOLG PE=1 SV=2 0.999965 44.5858 4.85846E-07 152.01 129.52 152.01 1 S SDVNRSSGGLQSKRLSLDSSCLDSSRDTDNG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX RLS(1)LDSSCLDSSR RLS(44.59)LDS(-44.59)S(-73.09)CLDS(-119.15)S(-124.49)R 3 3 -0.20783 7864 0 0 8313 0 0 8759.8 0 0 7592.6 0 0 9462.4 0 0 8449.2 0 0 10701 0 0 8660.1 0 0 8918.5 0 0 3917.2 0 0 7444.7 0 0 7848.9 0 0 8780 0 0 7853.6 0 0 9576.8 0 0 8440.8 0 0 10785 0 0 8796.6 0 0 8875.5 0 0 3889 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17328000 17328000 0 0 NaN 3388 1854 525 525 3329 3531 3768 4184 3768 4184 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13601 3768 4184 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13601 3768 4184 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13601 Q9BWU0 82 Q9BWU0 Q9BWU0 Kanadaptin SLC4A1AP sp|Q9BWU0|NADAP_HUMAN Kanadaptin OS=Homo sapiens GN=SLC4A1AP PE=1 SV=1 1 102.294 0.000198827 102.29 77.502 102.29 1 S SQDLSGDFKKPALPVSPAARSKAPASSSSNP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX KPALPVS(1)PAAR KPALPVS(102.29)PAAR 7 3 -0.16219 18748 0 0 24789 0 0 19897 0 0 25236 0 0 13621 0 0 21196 0 0 15245 0 0 22050 0 0 26699 0 0 3787.5 0 0 17744 0 0 23420 0 0 19896 0 0 25819 0 0 14227 0 0 21444 0 0 15754 0 0 22199 0 0 25859 0 0 4076.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 82812000 82812000 0 0 NaN 3389 1855 82 82 2151 2273 2447 2725 2447 2725 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12869 2447 2725 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12869 2447 2725 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12869 Q9BWW4 347 Q9BWW4 Q9BWW4 Single-stranded DNA-binding protein 3 SSBP3 sp|Q9BWW4|SSBP3_HUMAN Single-stranded DNA-binding protein 3 OS=Homo sapiens GN=SSBP3 PE=1 SV=1 1 70.3058 3.08716E-07 148.76 137.81 148.76 1 S NGSLGSGDIDGLPKNSPNNISGISNPPGTPR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP NS(1)PNNISGISNPPGTPR NS(70.31)PNNIS(-70.31)GIS(-101.37)NPPGT(-127.78)PR 2 3 -1.4299 14802 0 0 13383 0 0 16256 0 0 11883 0 0 11093 0 0 16616 0 0 11777 0 0 12381 0 0 11531 0 0 4595.2 0 0 14012 0 0 12634 0 0 16223 0 0 12369 0 0 11572 0 0 16399 0 0 11949 0 0 12722 0 0 11388 0 0 4613.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22586000 22586000 0 0 NaN 3390 1856 347 347 2927 3103 3323 3683 3323 3683 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11913 3323 3683 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11913 3323 3683 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11913 Q9BX63 990 Q9BX63 Q9BX63 Fanconi anemia group J protein BRIP1 sp|Q9BX63|FANCJ_HUMAN Fanconi anemia group J protein OS=Homo sapiens GN=BRIP1 PE=1 SV=1 0.975245 16.104 2.32817E-05 150.35 100.24 150.35 1 S EEAGKAEKIVISRSTSPTFNKQTKRVSWSSF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX S(0.001)T(0.024)S(0.975)PTFNK S(-30.67)T(-16.1)S(16.1)PT(-56.68)FNK 3 2 0.39002 44505 0 0 30094 0 0 44166 0 0 28085 0 0 36871 0 0 39893 0 0 37797 0 0 40662 0 0 28796 0 0 7454.9 0 0 42112 0 0 28417 0 0 44405 0 0 29150 0 0 37852 0 0 39483 0 0 38183 0 0 40982 0 0 28795 0 0 7960.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 68929000 68929000 0 0 NaN 3391 1857 990 990 4527 4826 5141 5709 5141 5709 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11201 5141 5709 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11201 5141 5709 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11201 Q9BX84 1000 Q9BX84 Q9BX84 Transient receptor potential cation channel subfamily M member 6 TRPM6 sp|Q9BX84|TRPM6_HUMAN Transient receptor potential cation channel subfamily M member 6 OS=Homo sapiens GN=TRPM6 PE=1 SV=2 1 45.1367 0.0431759 45.137 9.9127 45.137 1 S AIVLLSFGVARKAILSPKEPPSWSLARDIVF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX KAILS(1)PK KAILS(45.14)PK 5 3 -0.60826 59024 0 0 5049.8 0 0 61437 0 0 3554.8 0 0 4399.9 0 0 62763 0 0 5308.1 0 0 23846 0 0 4416.7 0 0 1288.3 0 0 55861 0 0 4761.8 0 0 61028 0 0 4692.6 0 0 7844.8 0 0 59783 0 0 5335.2 0 0 25466 0 0 4395.8 0 0 1765 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28152000 28152000 0 0 NaN 3392 1858 1000 1000 2005 2120 2284 2550 2284 2550 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14102 2284 2550 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14102 2284 2550 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14102 Q9BX95 112 Q9BX95 Q9BX95 Sphingosine-1-phosphate phosphatase 1 SGPP1 sp|Q9BX95|SGPP1_HUMAN Sphingosine-1-phosphate phosphatase 1 OS=Homo sapiens GN=SGPP1 PE=1 SV=2 0.995049 23.0311 6.49834E-06 138.07 117.94 138.07 1 S LGPASPRRAGALRRNSLTGEEGQLARVSNWP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX RNS(0.995)LT(0.005)GEEGQLAR RNS(23.03)LT(-23.03)GEEGQLAR 3 2 -0.71696 8549.1 0 0 19077 0 0 8028.2 0 0 18221 0 0 19358 0 0 9925.1 0 0 16235 0 0 15447 0 0 19083 0 0 4684.3 0 0 8087.7 0 0 18017 0 0 8246.7 0 0 18628 0 0 18934 0 0 10397 0 0 16754 0 0 15422 0 0 18708 0 0 4768.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23011000 23011000 0 0 NaN 3393 1859 112 112 3365 3569 3808 4227 3808 4227 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9504 3808 4227 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9504 3808 4227 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9504 Q9BXB4 189 Q9BXB4 Q9BXB4 Oxysterol-binding protein-related protein 11 OSBPL11 sp|Q9BXB4|OSB11_HUMAN Oxysterol-binding protein-related protein 11 OS=Homo sapiens GN=OSBPL11 PE=1 SV=2 0.999988 49.2354 1.0268E-07 170.59 142.29 170.59 1 S SLASSSNSPISQRRPSQNAISFFNVGHSKLQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX RPS(1)QNAISFFNVGHSK RPS(49.24)QNAIS(-49.24)FFNVGHS(-148.01)K 3 3 -0.11542 14982 0 0 19255 0 0 14279 0 0 19765 0 0 23824 0 0 16733 0 0 26823 0 0 23026 0 0 22611 0 0 30698 0 0 14174 0 0 18193 0 0 14541 0 0 20214 0 0 23651 0 0 17044 0 0 27044 0 0 23778 0 0 22488 0 0 29439 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 32875000 32875000 0 0 NaN 3394 1860 189 189 3412 3624 3865 4290;4291 3865 4291 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17546 3865 4291 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17546 3865 4291 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17546 Q9Y619;Q9BXI2 196;196 Q9Y619 Q9Y619 Mitochondrial ornithine transporter 1;Mitochondrial ornithine transporter 2 SLC25A15;SLC25A2 sp|Q9Y619|ORNT1_HUMAN Mitochondrial ornithine transporter 1 OS=Homo sapiens GN=SLC25A15 PE=1 SV=1;sp|Q9BXI2|ORNT2_HUMAN Mitochondrial ornithine transporter 2 OS=Homo sapiens GN=SLC25A2 PE=1 SV=3 0.997667 26.3102 0.0474583 52.482 27.538 52.482 1 S VPGYFFFFGGYELSRSFFASGRSKDELGPVP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX S(0.998)FFAS(0.002)GR S(26.31)FFAS(-26.31)GR 1 2 -0.24825 4701.6 0 0 14550 0 0 5128.3 0 0 15866 0 0 7049.5 0 0 4537.1 0 0 6275.4 0 0 9920.7 0 0 15398 0 0 2209.3 0 0 4450.5 0 0 13752 0 0 5161.5 0 0 16028 0 0 7038.1 0 0 5125.1 0 0 6674.8 0 0 9809.2 0 0 14806 0 0 2309.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8678800 8678800 0 0 NaN 3395 1861 196 196 3741 3981 4245 4720 4245 4720 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15362 4245 4720 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15362 4245 4720 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15362 Q9BXJ9 856 Q9BXJ9 Q9BXJ9 N-alpha-acetyltransferase 15, NatA auxiliary subunit NAA15 sp|Q9BXJ9|NAA15_HUMAN N-alpha-acetyltransferase 15, NatA auxiliary subunit OS=Homo sapiens GN=NAA15 PE=1 SV=1 0.780894 5.51983 3.21036E-31 308.42 274.11 308.42 1 S PGYEEDMKITVNGDSSAEAEELANEI_____ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPXXXXX ITVNGDS(0.219)S(0.781)AEAEELANEI IT(-45.35)VNGDS(-5.52)S(5.52)AEAEELANEI 8 2 -0.32679 2129 0 0 3426.5 0 0 2969 0 0 3684.4 0 0 2094 0 0 2148.5 0 0 2114.6 0 0 4137.8 0 0 3110 0 0 25974 0 0 2017.7 0 0 3238.4 0 0 2930.6 0 0 3742.7 0 0 2177.9 0 0 2296 0 0 2178.7 0 0 4856 0 0 3026.4 0 0 24554 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14870000 14870000 0 0 2.1259 3396 1862 856 856 1971 2084 2248 2510 2248 2510 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22542 2248 2510 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22542 2248 2510 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22542 Q9BXK1 102 Q9BXK1 Q9BXK1 Krueppel-like factor 16 KLF16 sp|Q9BXK1|KLF16_HUMAN Krueppel-like factor 16 OS=Homo sapiens GN=KLF16 PE=1 SV=1 0.824917 9.82321 1.38573E-08 172.98 158.22 172.98 1 S LRGGPGAAPGGASPASSSSAASSPSSGRAPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPPPPPPPPXXX GGPGAAPGGAS(0.085)PAS(0.825)S(0.086)S(0.002)S(0.001)AAS(0.001)S(0.001)PSSGR GGPGAAPGGAS(-9.88)PAS(9.82)S(-9.82)S(-26.61)S(-29.5)AAS(-29.21)S(-31.2)PS(-40.63)S(-45.29)GR 14 3 -0.25331 4919.4 0 0 3346.7 0 0 5923.7 0 0 3451.7 0 0 3174.2 0 0 5706.3 0 0 3478.1 0 0 3289.8 0 0 4208 0 0 3779 0 0 4658.8 0 0 3162.1 0 0 5874 0 0 3573.9 0 0 3388.5 0 0 5595.9 0 0 3545.8 0 0 3507.5 0 0 4121.1 0 0 3634.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19374000 19374000 0 0 NaN 3397 1863 102 102 1441 1518 1628 1798 1628 1798 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7009 1628 1798 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7009 1628 1798 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7009 Q9BXL5 123 Q9BXL5 Q9BXL5 Hemogen HEMGN sp|Q9BXL5|HEMGN_HUMAN Hemogen OS=Homo sapiens GN=HEMGN PE=1 SV=1 0.99975 36.0246 7.13294E-05 129.04 105.29 129.04 1 S TEPPGSITKVFPSVASPQKVVPEEHFSEICQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX VFPSVAS(1)PQK VFPS(-36.02)VAS(36.02)PQK 7 3 -0.25526 5415.1 0 0 19758 0 0 5643.4 0 0 16823 0 0 5516.1 0 0 6178.1 0 0 5099.4 0 0 9442.5 0 0 19492 0 0 2003.4 0 0 5124.9 0 0 18648 0 0 5667.1 0 0 17282 0 0 5613 0 0 6712.5 0 0 5604.9 0 0 9405.4 0 0 18623 0 0 2105 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 582650000 582650000 0 0 NaN 3398 1864 123 123 5107 5444 5798 6447 5798 6447 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17267 5798 6447 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17267 5798 6447 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17267 Q9BXP5 67 Q9BXP5 Q9BXP5 Serrate RNA effector molecule homolog SRRT sp|Q9BXP5|SRRT_HUMAN Serrate RNA effector molecule homolog OS=Homo sapiens GN=SRRT PE=1 SV=1 1 76.1761 0.0108926 76.176 41.899 76.176 1;2 S RGEYRDYDRNRRERFSPPRHELSPPQKRMRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPXXX FS(1)PPRHELS(1)PPQKR FS(76.18)PPRHELS(76.18)PPQKR 2 4 0.082661 49562 7090.8 0 74088 6201 0 47138 6723.4 0 73968 7894.8 0 44794 8059.9 0 47022 6223.5 0 40064 8640.7 0 56244 7758.6 0 81691 6604.4 0 5392.4 2762.4 0 46890 6708.3 0 69988 5867.5 0 47567 6808.6 0 75522 7975.9 0 45568 8106.5 0 48461 6337.2 0 42149 8711.8 0 56222 7806.2 0 78839 6603 0 6379.3 2780.7 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 130090000 103550000 26535000 0 NaN 3399 1865 67 67 1117;1323 1176;1396 1265;1266;1503 1391;1392;1665 1503 1665 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12893 1503 1665 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12893 1265 1391 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9120 Q9BXP5 26 Q9BXP5 Q9BXP5 Serrate RNA effector molecule homolog SRRT sp|Q9BXP5|SRRT_HUMAN Serrate RNA effector molecule homolog OS=Homo sapiens GN=SRRT PE=1 SV=1 0.999842 38.2848 0.0552479 63.944 30.162 63.944 1 S RRRDKFRRERSDYDRSRERDERRRGDDWNDR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPXXXXXXXXXXXXXX ERSDYDRS(1)R ERS(-50.28)DY(-38.28)DRS(38.28)R 8 3 -0.90387 1346 0 0 2133.2 0 0 1781.7 0 0 1953 0 0 1741.6 0 0 1467.5 0 0 2551.4 0 0 1786.9 0 0 2056.5 0 0 3359.1 0 0 1275.3 0 0 2014.1 0 0 1770 0 0 2008.5 0 0 1780.7 0 0 1502.9 0 0 2544.6 0 0 1881.3 0 0 2050.2 0 0 3204.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1215900 1215900 0 0 NaN 3400 1865 26 26 1132;3678 1191;3913 1281;4173 1408;4639 1281 1408 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4785 1281 1408 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4785 1281 1408 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4785 Q9BXP5 74 Q9BXP5 Q9BXP5 Serrate RNA effector molecule homolog SRRT sp|Q9BXP5|SRRT_HUMAN Serrate RNA effector molecule homolog OS=Homo sapiens GN=SRRT PE=1 SV=1 1 65.8417 0.0117593 76.176 41.899 65.842 1;2 S DRNRRERFSPPRHELSPPQKRMRRDWDEHSS X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPXXXXXXXXXX HELS(1)PPQKR HELS(65.84)PPQKR 4 3 -0.65942 33891 7090.8 0 29955 6201 0 33821 6723.4 0 30366 7894.8 0 33619 8059.9 0 35367 6223.5 0 31895 8640.7 0 31967 7758.6 0 32508 6604.4 0 5074.4 2762.4 0 32070 6708.3 0 28300 5867.5 0 34054 6808.6 0 31235 7975.9 0 34105 8106.5 0 35194 6337.2 0 32566 8711.8 0 32350 7806.2 0 32050 6603 0 5518 2780.7 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 69390000 42855000 26535000 0 NaN 3401 1865 74 74 1323;1707 1396;1800 1503;1944 1665;2167;2168 1944 2167 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8271 1503 1665 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12893 1503 1665 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12893 Q9BXS6 63 Q9BXS6 Q9BXS6 Nucleolar and spindle-associated protein 1 NUSAP1 sp|Q9BXS6|NUSAP_HUMAN Nucleolar and spindle-associated protein 1 OS=Homo sapiens GN=NUSAP1 PE=1 SV=1 0.868573 8.82203 2.44828E-18 241.09 229.44 241.09 1 S RKGNENQDESQTSASSCDETEIQISNQEEAE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP KGNENQDESQT(0.002)S(0.015)AS(0.114)S(0.869)CDETEIQISNQEEAER KGNENQDES(-42.95)QT(-26.12)S(-17.53)AS(-8.82)S(8.82)CDET(-65.34)EIQIS(-157.15)NQEEAER 15 4 0.009271 1643.4 0 0 1253.8 0 0 1848.4 0 0 1539.5 0 0 1378.3 0 0 2105.3 0 0 1409 0 0 1674.4 0 0 1159 0 0 9366.5 0 0 1555.9 0 0 1186.1 0 0 1843.8 0 0 1572.4 0 0 1426.7 0 0 2097.2 0 0 1425.9 0 0 1978.5 0 0 1154.2 0 0 8858.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13034000 13034000 0 0 NaN 3402 1866 63 63 2068 2188 2356 2626 2356 2626 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11113 2356 2626 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11113 2356 2626 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11113 Q9BXS6 269 Q9BXS6 Q9BXS6 Nucleolar and spindle-associated protein 1 NUSAP1 sp|Q9BXS6|NUSAP_HUMAN Nucleolar and spindle-associated protein 1 OS=Homo sapiens GN=NUSAP1 PE=1 SV=1 0.999996 54.0182 4.7451E-11 193.53 182.27 193.53 1 S RSCGPASQSTLGLKGSLKRSAISAAKTGVRF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX SCGPASQSTLGLKGS(1)LKR S(-168.75)CGPAS(-127.01)QS(-74.19)T(-54.02)LGLKGS(54.02)LKR 15 4 0.096034 21137 0 0 23679 0 0 19559 0 0 24413 0 0 14002 0 0 19929 0 0 12793 0 0 20089 0 0 23566 0 0 5675.8 0 0 19995 0 0 22373 0 0 19716 0 0 24949 0 0 14530 0 0 20189 0 0 13375 0 0 20315 0 0 22796 0 0 5809.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 130240000 130240000 0 0 NaN 3403 1866 269 269 3640 3870 4124 4582 4124 4582 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13247 4124 4582 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13247 4124 4582 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13247 Q9BY44 506 Q9BY44 Q9BY44 Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed EIF2A sp|Q9BY44|EIF2A_HUMAN Eukaryotic translation initiation factor 2A OS=Homo sapiens GN=EIF2A PE=1 SV=3 0.983927 17.8874 1.20379E-07 158.2 146.35 158.2 1 S HEAKKAAKQEARSDKSPDLAPTPAPQSTPRN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPX S(0.016)DKS(0.984)PDLAPTPAPQSTPR S(-17.89)DKS(17.89)PDLAPT(-41.55)PAPQS(-85.62)T(-85.77)PR 4 3 0.27958 99044 0 0 129390 0 0 98657 0 0 112550 0 0 75273 0 0 105600 0 0 73197 0 0 107490 0 0 136020 0 0 24227 0 0 93720 0 0 122130 0 0 99074 0 0 116480 0 0 77798 0 0 106230 0 0 76328 0 0 108480 0 0 131550 0 0 25300 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 274070000 274070000 0 0 NaN 3404 1869 506 506 3664 3899 4158 4622 4158 4622 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11048 4158 4622 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11048 4158 4622 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11048 Q9BY77 126 Q9BY77 Q9BY77 Polymerase delta-interacting protein 3 POLDIP3 sp|Q9BY77|PDIP3_HUMAN Polymerase delta-interacting protein 3 OS=Homo sapiens GN=POLDIP3 PE=1 SV=2 0.622541 2.17297 2.77509E-08 170.53 152.83 170.53 1 S PRQVADAREKISLKRSSPAAFINPPIGTVTP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP RS(0.623)S(0.377)PAAFINPPIGTVTPALK RS(2.17)S(-2.17)PAAFINPPIGT(-116.83)VT(-143.71)PALK 2 3 0.25642 6654 0 0 13771 0 0 7039.4 0 0 12781 0 0 21406 0 0 6985.7 0 0 23640 0 0 14431 0 0 13210 0 0 19084 0 0 6297.8 0 0 13004 0 0 7246.2 0 0 13091 0 0 20896 0 0 7390.1 0 0 23670 0 0 14761 0 0 13477 0 0 18304 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 64658000 64658000 0 0 NaN 3405 1870 126 126 3503 3720 3966 4404 3966 4404 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20683 3966 4404 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20683 3966 4404 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20683 Q9BY77 383 Q9BY77 Q9BY77 Polymerase delta-interacting protein 3 POLDIP3 sp|Q9BY77|PDIP3_HUMAN Polymerase delta-interacting protein 3 OS=Homo sapiens GN=POLDIP3 PE=1 SV=2 0.697951 4.66814 1.01007E-07 148.85 115.18 148.85 1 S SPSMKKESELPRRVNSASSSNPPAEVDPDTI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP RVNS(0.698)AS(0.025)S(0.039)S(0.238)NPPAEVDPDTILK RVNS(4.67)AS(-14.45)S(-12.55)S(-4.67)NPPAEVDPDT(-114.7)ILK 4 3 2.1627 8060.3 0 0 8283.9 0 0 8129.5 0 0 8738.3 0 0 12288 0 0 8514.6 0 0 11903 0 0 10635 0 0 7962.6 0 0 19438 0 0 7627.4 0 0 7828.1 0 0 8232.1 0 0 8940.9 0 0 12215 0 0 8607.8 0 0 12027 0 0 11171 0 0 8023.8 0 0 18550 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15081000 15081000 0 0 NaN 3406 1870 383 383 3547 3765 4011 4452 4011 4452 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16733 4011 4452 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16733 4011 4452 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16733 Q9BYW2 754 Q9BYW2 Q9BYW2 Histone-lysine N-methyltransferase SETD2 SETD2 sp|Q9BYW2|SETD2_HUMAN Histone-lysine N-methyltransferase SETD2 OS=Homo sapiens GN=SETD2 PE=1 SV=3 0.999998 57.5237 0.000143896 103.39 76.052 103.39 1 S HKKSESPFRETEPLVSPHQDKLMSMPVMTVD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX ETEPLVS(1)PHQDK ET(-57.52)EPLVS(57.52)PHQDK 7 3 0.55959 14883 0 0 18440 0 0 15631 0 0 19748 0 0 17711 0 0 18830 0 0 17960 0 0 16923 0 0 20392 0 0 7839.5 0 0 14086 0 0 17427 0 0 15722 0 0 20182 0 0 17856 0 0 18906 0 0 18337 0 0 17285 0 0 20018 0 0 7773.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17690000 17690000 0 0 NaN 3407 1872 754 754 1182 1243 1341 1485 1341 1485 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11085 1341 1485 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11085 1341 1485 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11085 Q9BYW2 624 Q9BYW2 Q9BYW2 Histone-lysine N-methyltransferase SETD2 SETD2 sp|Q9BYW2|SETD2_HUMAN Histone-lysine N-methyltransferase SETD2 OS=Homo sapiens GN=SETD2 PE=1 SV=3 0.969519 15.0253 0.0124186 81.642 47.681 81.642 1 S REKAGSPAPSNRLNDSPTLKKLDELPIFKSE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX LNDS(0.97)PT(0.03)LK LNDS(15.03)PT(-15.03)LK 4 2 0.25999 25481 0 0 27342 0 0 26955 0 0 28873 0 0 22895 0 0 25597 0 0 22942 0 0 25801 0 0 31849 0 0 7802.3 0 0 24117 0 0 25837 0 0 27008 0 0 29500 0 0 23483 0 0 25821 0 0 23595 0 0 26107 0 0 31048 0 0 7943.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29777000 29777000 0 0 NaN 3408 1872 624 624 2473 2611 2805 3132 2805 3132 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13951 2805 3132 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13951 2805 3132 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13951 Q9BYW2 1228 Q9BYW2 Q9BYW2 Histone-lysine N-methyltransferase SETD2 SETD2 sp|Q9BYW2|SETD2_HUMAN Histone-lysine N-methyltransferase SETD2 OS=Homo sapiens GN=SETD2 PE=1 SV=3 0.999996 54.3591 0.00130631 98.169 71.44 98.169 1 S PNKSWQQTTFQNRPDSRLGKTELSFSSSCEI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPXXXXXXXXXXXXXX SWQQTTFQNRPDS(1)R S(-93.62)WQQT(-63.13)T(-54.36)FQNRPDS(54.36)R 13 3 -0.69528 22399 0 0 14207 0 0 24342 0 0 16054 0 0 21074 0 0 23059 0 0 23340 0 0 20295 0 0 14727 0 0 7816 0 0 21203 0 0 13431 0 0 24364 0 0 16484 0 0 21603 0 0 22780 0 0 23414 0 0 20700 0 0 14896 0 0 7829.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19391000 19391000 0 0 NaN 3409 1872 1228 1228 4589 4894 5214 5789 5214 5789 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11956 5214 5789 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11956 5214 5789 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11956 Q9BZ23 189 Q9BZ23 Q9BZ23 Pantothenate kinase 2, mitochondrial PANK2 sp|Q9BZ23|PANK2_HUMAN Pantothenate kinase 2, mitochondrial OS=Homo sapiens GN=PANK2 PE=1 SV=3 0.999822 37.4954 1.31389E-10 176.58 115.42 105.91 1 S AVGASAEGTRRDRLGSYSGPTSVSRQRVESL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPXXXXXX DRLGS(1)YSGPTSVSR DRLGS(37.5)Y(-72.51)S(-37.5)GPT(-67.41)S(-74.16)VS(-96.35)R 5 3 -0.22122 117230 0 0 111880 0 0 114360 0 0 114830 0 0 95701 0 0 114720 0 0 99811 0 0 115820 0 0 112870 0 0 47341 0 0 110910 0 0 105710 0 0 115100 0 0 117720 0 0 98290 0 0 115100 0 0 101760 0 0 117560 0 0 110810 0 0 47258 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 62304000 62304000 0 0 NaN 3410 1873 189 189 787;2393 835;2530 891;2723 982;3041;3042 891 982 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10750 2723 3042 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13215 2723 3042 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13215 Q9BZ23 168 Q9BZ23 Q9BZ23 Pantothenate kinase 2, mitochondrial PANK2 sp|Q9BZ23|PANK2_HUMAN Pantothenate kinase 2, mitochondrial OS=Homo sapiens GN=PANK2 PE=1 SV=3 0.708703 3.93962 0.00417791 91.696 74.562 91.696 1 S GDPEGRRQEPLRRRASSASVPAVGASAEGTR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RAS(0.709)S(0.286)AS(0.005)VPAVGASAEGTR RAS(3.94)S(-3.94)AS(-21.34)VPAVGAS(-86.6)AEGT(-89.23)R 3 3 1.0648 10688 0 0 7735.6 0 0 9254.1 0 0 10484 0 0 9272.6 0 0 9694 0 0 7857.8 0 0 10521 0 0 9318 0 0 5105.2 0 0 10108 0 0 7323.2 0 0 9398.3 0 0 10584 0 0 9390.2 0 0 9772 0 0 8106.5 0 0 10675 0 0 9132.1 0 0 5050.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13726000 13726000 0 0 NaN 3411 1873 168 168 3200 3394 3628 4024 3628 4024 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8934 3628 4024 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8934 3628 4024 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8934 Q9BZ72 1277 Q9BZ72 Q9BZ72 Membrane-associated phosphatidylinositol transfer protein 2 PITPNM2 sp|Q9BZ72|PITM2_HUMAN Membrane-associated phosphatidylinositol transfer protein 2 OS=Homo sapiens GN=PITPNM2 PE=1 SV=1 1 59.5743 0.0234354 59.574 43.211 59.574 1 S RPARNTATRMALRKGSFGLPGQGDFLRSRNH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX KGS(1)FGLPGQGDFLR KGS(59.57)FGLPGQGDFLR 3 3 1.8771 7753.8 0 0 6275.2 0 0 7562.4 0 0 4736.9 0 0 9684.9 0 0 7286.6 0 0 9293.4 0 0 7595.3 0 0 5499.7 0 0 12929 0 0 7336.4 0 0 5919.2 0 0 7651.1 0 0 4998.6 0 0 9693.8 0 0 7218.1 0 0 9374.8 0 0 7996.3 0 0 5587.4 0 0 12350 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9917900 9917900 0 0 NaN 3412 1874 1277 1277 2074 2194 2363 2633 2363 2633 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19706 2363 2633 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19706 2363 2633 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19706 Q9BZ95 150 Q9BZ95 Q9BZ95 Histone-lysine N-methyltransferase NSD3 WHSC1L1 sp|Q9BZ95|NSD3_HUMAN Histone-lysine N-methyltransferase NSD3 OS=Homo sapiens GN=WHSC1L1 PE=1 SV=1 0.900012 9.54301 0.0423275 45.28 8.4328 45.28 1 S PPPSVPQTVIPKKTGSPEIKLKITKTIQNGR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX KT(0.1)GS(0.9)PEIK KT(-9.54)GS(9.54)PEIK 4 3 -0.34303 40763 0 0 28109 0 0 37246 0 0 25794 0 0 21350 0 0 36312 0 0 23977 0 0 30210 0 0 27447 0 0 3497 0 0 38559 0 0 26540 0 0 37517 0 0 26795 0 0 22645 0 0 35858 0 0 24375 0 0 30645 0 0 26935 0 0 3992 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 63552000 63552000 0 0 NaN 3413 1875 150 150 2246 2374 2555 2852 2555 2852 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9959 2555 2852 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9959 2555 2852 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9959 Q9BZ95 585 Q9BZ95 Q9BZ95 Histone-lysine N-methyltransferase NSD3 WHSC1L1 sp|Q9BZ95|NSD3_HUMAN Histone-lysine N-methyltransferase NSD3 OS=Homo sapiens GN=WHSC1L1 PE=1 SV=1 0.982001 19.9761 0.0386852 54.784 26.272 54.784 1 S GSVEKKQQRRSIRTRSESEKSTEVVPKKKIK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX T(0.01)RS(0.982)ES(0.008)EK T(-19.98)RS(19.98)ES(-20.82)EK 3 2 -0.019687 6428.4 0 0 3655.5 0 0 5768.2 0 0 4138.8 0 0 3415 0 0 5050.1 0 0 3405.8 0 0 4101.9 0 0 3992 0 0 2218.1 0 0 6080.5 0 0 3456 0 0 5817.4 0 0 4234.8 0 0 3604.9 0 0 5013.6 0 0 3483.3 0 0 4218.1 0 0 3914.1 0 0 2183.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 3966800 3966800 0 0 NaN 3414 1875 585 585 4898 5223 5564 6185 5564 6185 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5464 5564 6185 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5464 5564 6185 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5464 Q9BZD4 247 Q9BZD4 Q9BZD4 Kinetochore protein Nuf2 NUF2 sp|Q9BZD4|NUF2_HUMAN Kinetochore protein Nuf2 OS=Homo sapiens GN=NUF2 PE=1 SV=2 1 67.4565 0.00167024 112.75 56.019 67.456 1 S SLKEIQESLKTKIVDSPEKLKNYKEKMKDTV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX IVDS(1)PEKLK IVDS(67.46)PEKLK 4 3 -0.099574 29256 0 0 46461 0 0 32992 0 0 42480 0 0 25285 0 0 32697 0 0 27057 0 0 37117 0 0 50197 0 0 14224 0 0 27697 0 0 43868 0 0 32915 0 0 43702 0 0 26161 0 0 33293 0 0 28090 0 0 37488 0 0 48548 0 0 14253 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 37509000 37509000 0 0 NaN 3415 1876 247 247 1973;1974 2086;2087 2250;2251 2512;2513 2251 2513 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15339 2250 2512 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12191 2250 2512 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12191 Q9BZE9 500 Q9BZE9 Q9BZE9 Tether containing UBX domain for GLUT4 ASPSCR1 sp|Q9BZE9|ASPC1_HUMAN Tether containing UBX domain for GLUT4 OS=Homo sapiens GN=ASPSCR1 PE=1 SV=1 0.731406 4.35061 0.000805445 99.496 85.817 99.496 1 S AADVLVARYMSRAAGSPSPLPAPDPAPKSEP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPXXX AAGS(0.731)PS(0.269)PLPAPDPAPK AAGS(4.35)PS(-4.35)PLPAPDPAPK 4 3 0.43331 13813 0 0 14729 0 0 16899 0 0 15198 0 0 17152 0 0 13612 0 0 14832 0 0 15664 0 0 16971 0 0 10119 0 0 13083 0 0 13917 0 0 16837 0 0 15551 0 0 17360 0 0 13760 0 0 15268 0 0 15937 0 0 16654 0 0 9890.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30166000 30166000 0 0 NaN 3416 1877 500 500 35 37 41 51 41 51 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14547 41 51 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14547 41 51 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14547 Q9BZF2 272 Q9BZF2 Q9BZF2 Oxysterol-binding protein-related protein 7 OSBPL7 sp|Q9BZF2|OSBL7_HUMAN Oxysterol-binding protein-related protein 7 OS=Homo sapiens GN=OSBPL7 PE=2 SV=1 0.999998 57.8483 0.001512 97.273 79.2 97.273 1 S FAKDDTIGRVGRLHGSVPNLSRYLESRDSSG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX LHGS(1)VPNLSR LHGS(57.85)VPNLS(-57.85)R 4 3 -0.15279 18512 0 0 20586 0 0 19998 0 0 20175 0 0 18054 0 0 19366 0 0 15736 0 0 18126 0 0 21297 0 0 3518.8 0 0 17523 0 0 19445 0 0 20023 0 0 20727 0 0 18409 0 0 19438 0 0 16281 0 0 18336 0 0 20778 0 0 3732.9 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 19859000 19859000 0 0 NaN 3417 1878 272 272 2397 2534 2727 3046;3047 2727 3046 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12035 2727 3046 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12035 2727 3046 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12035 Q9BZL6 396 Q9BZL6 Q9BZL6 Serine/threonine-protein kinase D2 PRKD2 sp|Q9BZL6|KPCD2_HUMAN Serine/threonine-protein kinase D2 OS=Homo sapiens GN=PRKD2 PE=1 SV=2 0.557903 3.12804 0.00148304 105.2 70.474 105.2 1 S LMRVVQSVRHTTRKSSTTLREGWVVHYSNKD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX KS(0.009)S(0.558)T(0.162)T(0.271)LR KS(-17.94)S(3.13)T(-5.38)T(-3.13)LR 3 3 -0.39378 67998 0 0 38981 0 0 67312 0 0 41198 0 0 48295 0 0 71058 0 0 51504 0 0 53571 0 0 41926 0 0 2130.7 0 0 64341 0 0 36836 0 0 67592 0 0 42645 0 0 50169 0 0 69677 0 0 52010 0 0 54477 0 0 41775 0 0 3246.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 55942000 55942000 0 0 NaN 3418 1879 396 396 2237 2365 2546 2843 2546 2843 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7186 2546 2843 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7186 2546 2843 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7186 Q9BZZ5 464 Q9BZZ5 Q9BZZ5 Apoptosis inhibitor 5 API5 sp|Q9BZZ5|API5_HUMAN Apoptosis inhibitor 5 OS=Homo sapiens GN=API5 PE=1 SV=3 0.999739 36.7078 3.36474E-07 157.33 136.91 128.11 1 S VEIGQKRASEDTTSGSPPKKSSAGPKRDARQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPXXXXXXXXXXX ASEDTTSGS(1)PPKK AS(-88.2)EDT(-56.51)T(-43.46)S(-36.71)GS(36.71)PPKK 9 3 0.21216 270340 0 0 270020 0 0 281640 0 0 262130 0 0 224630 0 0 267970 0 0 217540 0 0 255260 0 0 284030 0 0 16329 0 0 255850 0 0 255030 0 0 282230 0 0 269730 0 0 231290 0 0 268210 0 0 223590 0 0 257030 0 0 277430 0 0 21283 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 351040000 351040000 0 0 NaN 3419 1880 464 464 446;447 476;477 512 573;574 512 573 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7894 511 572 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7552 511 572 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7552 Q9C004 125 Q9C004 Q9C004 Protein sprouty homolog 4 SPRY4 sp|Q9C004|SPY4_HUMAN Protein sprouty homolog 4 OS=Homo sapiens GN=SPRY4 PE=1 SV=2 1 108.144 8.09705E-05 108.14 83.857 108.14 1 S RLLDHMAPPPVADQASPRAVRIQPKVVHCQP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX LLDHMAPPPVADQAS(1)PR LLDHMAPPPVADQAS(108.14)PR 15 3 -0.38368 4694.2 0 0 8432.4 0 0 5103.7 0 0 8529.7 0 0 3574 0 0 4337.3 0 0 4047.2 0 0 6792.7 0 0 8900.5 0 0 6726.8 0 0 4443.4 0 0 7966.4 0 0 5097.8 0 0 8684.7 0 0 3728.5 0 0 4578 0 0 4229.9 0 0 6921.1 0 0 8576.3 0 0 6491.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23735000 23735000 0 0 NaN 3420 1881 125 125 2429 2567 2761 3083 2761 3083 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17197 2761 3083 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17197 2761 3083 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17197 Q9C073 67 Q9C073 Q9C073 Protein FAM117A FAM117A sp|Q9C073|F117A_HUMAN Protein FAM117A OS=Homo sapiens GN=FAM117A PE=1 SV=1 0.999301 31.5495 7.55934E-16 217.12 175.55 217.12 1 S LQQPHQRRDGGGRAASVPCSVAPEKSVCRPQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX AAS(0.999)VPCS(0.001)VAPEK AAS(31.55)VPCS(-31.55)VAPEK 3 2 -1.6932 7787.4 0 0 17103 0 0 8392.3 0 0 16923 0 0 45067 0 0 8159 0 0 41927 0 0 22889 0 0 17632 0 0 10250 0 0 7371.1 0 0 16155 0 0 8858.9 0 0 17246 0 0 43501 0 0 8773.3 0 0 42163 0 0 22697 0 0 18428 0 0 10182 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16904000 16904000 0 0 NaN 3421 1882 67 67 81 86 94 107 94 107 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12661 94 107 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12661 94 107 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12661 Q9C073 29 Q9C073 Q9C073 Protein FAM117A FAM117A sp|Q9C073|F117A_HUMAN Protein FAM117A OS=Homo sapiens GN=FAM117A PE=1 SV=1 0.999951 43.1378 0.0138378 76.563 66.908 47.942 1 S WGPGRGGAGGLRRGCSPPAPAGSPRAGLQPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX RGCS(1)PPAPAGSPR RGCS(43.14)PPAPAGS(-43.14)PR 4 3 0.15651 13964 0 0 15491 0 0 13478 0 0 14943 0 0 21740 0 0 14007 0 0 22916 0 0 16918 0 0 17147 0 0 5330 0 0 13212 0 0 14631 0 0 13703 0 0 15361 0 0 21585 0 0 14128 0 0 23112 0 0 17018 0 0 17163 0 0 5410.4 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 18955000 18955000 0 0 NaN 3422 1882 29 29 1380;3241 1456;3438 1565;3674 1729;4077 3674 4077 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6043 1565 1729 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7156 1565 1729 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7156 Q9C073 207 Q9C073 Q9C073 Protein FAM117A FAM117A sp|Q9C073|F117A_HUMAN Protein FAM117A OS=Homo sapiens GN=FAM117A PE=1 SV=1 1 104.2 0.00131771 104.2 73.127 104.2 1 S ASPPSFPSGSPVLRLSPCLHRSLEGLNQELE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPXXXXXXXXXX LS(1)PCLHR LS(104.2)PCLHR 2 3 0.20648 8088.4 0 0 8526.9 0 0 9347.4 0 0 8956 0 0 13701 0 0 8904.3 0 0 13891 0 0 9763.8 0 0 9155 0 0 335.25 0 0 7658.4 0 0 8057.5 0 0 9393.6 0 0 9168.7 0 0 13645 0 0 8938.9 0 0 14001 0 0 9770.6 0 0 9234.1 0 0 541.65 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17224000 17224000 0 0 NaN 3423 1882 207 207 2568 2712 2910 3244 2910 3244 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10424 2910 3244 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10424 2910 3244 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10424 Q9C073 145 Q9C073 Q9C073 Protein FAM117A FAM117A sp|Q9C073|F117A_HUMAN Protein FAM117A OS=Homo sapiens GN=FAM117A PE=1 SV=1 0.855362 10.6487 0.0102349 73.834 38.177 73.834 1 S LEGERASSCAHKRSASWGSTDHRKEISKLKQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX S(0.011)AS(0.855)WGS(0.06)T(0.074)DHRK S(-18.88)AS(10.65)WGS(-11.55)T(-10.65)DHRK 3 3 0.050774 10992 0 0 16090 0 0 12660 0 0 14913 0 0 14796 0 0 10941 0 0 33135 0 0 21994 0 0 15985 0 0 2104.2 0 0 10408 0 0 15193 0 0 12713 0 0 15320 0 0 15132 0 0 11286 0 0 32378 0 0 21696 0 0 16499 0 0 2490.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16362000 16362000 0 0 NaN 3424 1882 145 145 3627 3856 4109 4566 4109 4566 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7983 4109 4566 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7983 4109 4566 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7983 Q9C073 213 Q9C073 Q9C073 Protein FAM117A FAM117A sp|Q9C073|F117A_HUMAN Protein FAM117A OS=Homo sapiens GN=FAM117A PE=1 SV=1 1 238.797 3.36341E-16 238.8 210.46 238.8 1 S PSGSPVLRLSPCLHRSLEGLNQELEEVFVKE X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPX S(1)LEGLNQELEEVFVK S(238.8)LEGLNQELEEVFVK 1 3 -0.080187 3457.2 0 0 7640.1 0 0 2558.3 0 0 14585 0 0 21904 0 0 4871.9 0 0 17692 0 0 17101 0 0 16964 0 0 513660 0 0 3268 0 0 7257 0 0 2856.6 0 0 14396 0 0 21025 0 0 6437.5 0 0 18191 0 0 32157 0 0 16769 0 0 484060 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 399040000 399040000 0 0 NaN 3425 1882 213 213 3930 4189 4471 4970 4471 4970 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24043 4471 4970 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24043 4471 4970 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24043 Q9C086 351 Q9C086 Q9C086 INO80 complex subunit B INO80B sp|Q9C086|IN80B_HUMAN INO80 complex subunit B OS=Homo sapiens GN=INO80B PE=1 SV=2 0.999999 62.5021 0.000136455 122.55 103.93 122.55 1 S RINLQMRLGGPEGPGSPLLAT__________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPXXXXXXXXXX LGGPEGPGS(1)PLLAT LGGPEGPGS(62.5)PLLAT(-62.5) 9 2 -0.16302 13467 0 0 10822 0 0 13402 0 0 11226 0 0 11988 0 0 13310 0 0 12154 0 0 12053 0 0 10649 0 0 15896 0 0 12743 0 0 10226 0 0 13482 0 0 11536 0 0 12250 0 0 13262 0 0 12322 0 0 12618 0 0 10571 0 0 15247 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26002000 26002000 0 0 NaN 3426 1883 351 351 2368 2501 2690 3003 2690 3003 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20016 2690 3003 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20016 2690 3003 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20016 Q9C0B5 380 Q9C0B5 Q9C0B5 Palmitoyltransferase ZDHHC5 ZDHHC5 sp|Q9C0B5|ZDHC5_HUMAN Palmitoyltransferase ZDHHC5 OS=Homo sapiens GN=ZDHHC5 PE=1 SV=2 0.997865 28.65 0.0251223 56.38 36.542 56.38 1 S AAMPHSSSAKLSRGDSLKEPTSIAESSRHPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX GDS(0.998)LKEPT(0.001)S(0.001)IAESSR GDS(28.65)LKEPT(-28.65)S(-32.56)IAES(-38.58)S(-40.86)R 3 3 0.56321 51369 0 0 29060 0 0 57908 0 0 26981 0 0 29649 0 0 58361 0 0 29907 0 0 40267 0 0 29248 0 0 7064.9 0 0 48632 0 0 27440 0 0 57589 0 0 28334 0 0 31760 0 0 56884 0 0 30412 0 0 41305 0 0 28887 0 0 7584.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 49488000 49488000 0 0 NaN 3427 1884 380 380 1395 1471 1580 1745 1580 1745 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12405 1580 1745 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12405 1580 1745 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12405 Q9C0B5 621 Q9C0B5 Q9C0B5 Palmitoyltransferase ZDHHC5 ZDHHC5 sp|Q9C0B5|ZDHC5_HUMAN Palmitoyltransferase ZDHHC5 OS=Homo sapiens GN=ZDHHC5 PE=1 SV=2 0.997184 25.492 6.24915E-05 128.22 95.725 128.22 1 S PRFGKPDGLRGRGVGSPEPGPTAPYLGRSMS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPXXX GVGS(0.997)PEPGPT(0.003)APYLGR GVGS(25.49)PEPGPT(-25.49)APY(-69.16)LGR 4 2 -0.37334 11715 0 0 6427.6 0 0 12332 0 0 7947.6 0 0 6444.6 0 0 12572 0 0 7086.3 0 0 11304 0 0 8213.1 0 0 16717 0 0 11087 0 0 6080.6 0 0 12312 0 0 8141.9 0 0 6897.7 0 0 12410 0 0 7213.3 0 0 11891 0 0 8056.1 0 0 16002 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12020000 12020000 0 0 NaN 3428 1884 621 621 1671 1763 1905 2123 1905 2123 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15236 1905 2123 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15236 1905 2123 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15236 Q9C0B5 694 Q9C0B5 Q9C0B5 Palmitoyltransferase ZDHHC5 ZDHHC5 sp|Q9C0B5|ZDHC5_HUMAN Palmitoyltransferase ZDHHC5 OS=Homo sapiens GN=ZDHHC5 PE=1 SV=2 0.541146 2.67407 1.59908E-07 147.26 134.49 147.26 1 S SLGSASPGPGQPPLSSPTRGGVKKVSGVGGT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX SLGSASPGPGQPPLS(0.292)S(0.541)PT(0.167)R S(-114.25)LGS(-105.66)AS(-94.98)PGPGQPPLS(-2.67)S(2.67)PT(-5.12)R 16 3 -0.1731 45913 0 0 38089 0 0 50032 0 0 37508 0 0 40122 0 0 51998 0 0 43795 0 0 44194 0 0 46309 0 0 16609 0 0 43461 0 0 35978 0 0 50028 0 0 38780 0 0 41356 0 0 51407 0 0 44472 0 0 45132 0 0 45586 0 0 16663 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 58010000 58010000 0 0 NaN 3429 1884 694 694 3940 4199 4481 4980;4981 4481 4981 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13039 4481 4981 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13039 4481 4981 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13039 Q9C0C2 672 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein TNKS1BP1 sp|Q9C0C2|TB182_HUMAN 182 kDa tankyrase-1-binding protein OS=Homo sapiens GN=TNKS1BP1 PE=1 SV=4 1 125.992 1.2322E-15 215.61 178.1 215.61 1 S ETTQARTEAQDLCRASPEPPGPESSSRWLDD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPPXXXX AS(1)PEPPGPESSSR AS(125.99)PEPPGPES(-125.99)S(-136.86)S(-145.04)R 2 2 -0.10746 17747 0 0 17404 0 0 18286 0 0 18687 0 0 18632 0 0 19559 0 0 17842 0 0 20016 0 0 19774 0 0 7712.2 0 0 16795 0 0 16448 0 0 18385 0 0 19123 0 0 18878 0 0 19586 0 0 18253 0 0 20293 0 0 19430 0 0 7725.3 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 22347000 22347000 0 0 NaN 3430 1885 672 672 478;4676 509;4987 548;5312 612;5904 548 612 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7375 548 612 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7375 548 612 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7375 Q9C0C2 712 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein TNKS1BP1 sp|Q9C0C2|TB182_HUMAN 182 kDa tankyrase-1-binding protein OS=Homo sapiens GN=TNKS1BP1 PE=1 SV=4 0.646407 5.92911 0.000687292 99.666 77.036 99.666 1 S GGARRGAGAELKDTQSPSTCSEGLLGWSQKD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPX DT(0.082)QS(0.646)PS(0.165)T(0.106)CS(0.001)EGLLGWSQK DT(-8.97)QS(5.93)PS(-5.93)T(-7.86)CS(-29.31)EGLLGWS(-85.41)QK 4 3 -0.27923 10047 0 0 10678 0 0 10272 0 0 11294 0 0 5892.3 0 0 10095 0 0 6847.9 0 0 10655 0 0 10686 0 0 17519 0 0 9507.8 0 0 10091 0 0 10278 0 0 11539 0 0 6255.2 0 0 10213 0 0 7029.8 0 0 11194 0 0 10381 0 0 16743 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9106200 9106200 0 0 NaN 3431 1885 712 712 829 877 933 1028 933 1028 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19743 933 1028 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19743 933 1028 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19743 Q9C0C2 1110 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein TNKS1BP1 sp|Q9C0C2|TB182_HUMAN 182 kDa tankyrase-1-binding protein OS=Homo sapiens GN=TNKS1BP1 PE=1 SV=4 0.589454 1.57088 0.0305224 60.401 35.471 60.401 1 S GPQREAAFSPGQQDWSRDFCIEASERSYQFG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPXXXXXXXXXXXXXX EAAFS(0.411)PGQQDWS(0.589)R EAAFS(-1.57)PGQQDWS(1.57)R 12 2 1.1571 8606.2 0 0 14651 0 0 9177.5 0 0 22193 0 0 8411.6 0 0 9921.2 0 0 8950.8 0 0 8611.3 0 0 11426 0 0 24457 0 0 8145.8 0 0 13883 0 0 9200 0 0 22130 0 0 8591.3 0 0 10522 0 0 9153 0 0 9425.4 0 0 11169 0 0 23228 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10647000 10647000 0 0 NaN 3432 1885 1110 1110 858 910 987 1090 987 1090 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14950 987 1090 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14950 987 1090 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14950 Q9C0C2 836 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein TNKS1BP1 sp|Q9C0C2|TB182_HUMAN 182 kDa tankyrase-1-binding protein OS=Homo sapiens GN=TNKS1BP1 PE=1 SV=4 1 225.372 5.70179E-16 225.37 179.86 225.37 1 S QDRVVGKPAQLGTQRSQEADVQDWEFRKRDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(1)QEADVQDWEFR S(225.37)QEADVQDWEFR 1 2 -0.53837 12867 0 0 14807 0 0 12947 0 0 14584 0 0 19243 0 0 10826 0 0 19982 0 0 15490 0 0 15636 0 0 36986 0 0 12175 0 0 13986 0 0 13111 0 0 14928 0 0 19162 0 0 11147 0 0 20186 0 0 16471 0 0 15613 0 0 35186 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25874000 25874000 0 0 NaN 3433 1885 836 836 4221 4499 4795 5321 4795 5321 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17794 4795 5321 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17794 4795 5321 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17794 Q9C0C2 1138 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein TNKS1BP1 sp|Q9C0C2|TB182_HUMAN 182 kDa tankyrase-1-binding protein OS=Homo sapiens GN=TNKS1BP1 PE=1 SV=4 0.6962 3.82964 0.0114291 80.187 60.023 80.187 1 S QFGIIGNDRVSGAGFSPSSKMEGGHFVPPGK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX VSGAGFS(0.696)PS(0.288)S(0.015)K VS(-41.32)GAGFS(3.83)PS(-3.83)S(-16.52)K 7 2 -1.1713 21403 0 0 31341 0 0 21059 0 0 30787 0 0 16725 0 0 21034 0 0 17768 0 0 24307 0 0 35122 0 0 20088 0 0 20251 0 0 29604 0 0 21174 0 0 31488 0 0 17260 0 0 21598 0 0 18512 0 0 24860 0 0 33919 0 0 19478 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22607000 22607000 0 0 NaN 3434 1885 1138 1138 5245 5591 5960 6624 5960 6624 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13485 5960 6624 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13485 5960 6624 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13485 Q9C0C2 691 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein TNKS1BP1 sp|Q9C0C2|TB182_HUMAN 182 kDa tankyrase-1-binding protein OS=Homo sapiens GN=TNKS1BP1 PE=1 SV=4 0.999811 37.2245 0.00867257 77.847 58.269 77.847 1 S PGPESSSRWLDDLLASPPPSGGGARRGAGAE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPXXXXXX WLDDLLAS(1)PPPSGGGAR WLDDLLAS(37.22)PPPS(-37.22)GGGAR 8 3 -0.26999 8443 0 0 10903 0 0 7942 0 0 9856.9 0 0 6923.6 0 0 7540.2 0 0 7462.9 0 0 8576.7 0 0 10862 0 0 20860 0 0 7987.3 0 0 10294 0 0 8014.5 0 0 10147 0 0 7097.1 0 0 7713.6 0 0 7663.8 0 0 9191.5 0 0 10574 0 0 19841 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 44988000 44988000 0 0 NaN 3435 1885 691 691 5340 5688 6066 6740 6066 6740 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23581 6066 6740 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23581 6066 6740 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23581 Q9C0C2 601 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein TNKS1BP1 sp|Q9C0C2|TB182_HUMAN 182 kDa tankyrase-1-binding protein OS=Homo sapiens GN=TNKS1BP1 PE=1 SV=4 0.999998 56.9283 4.5972E-11 188.08 174.66 188.08 1 S AEERYESQEPLAGQESPLPLATREAALPILE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPXXXXXXXX YESQEPLAGQES(1)PLPLATR Y(-139.25)ES(-127.69)QEPLAGQES(56.93)PLPLAT(-56.93)R 12 3 0.37612 8335.4 0 0 8913 0 0 8319.8 0 0 9363.8 0 0 6726.7 0 0 8333.5 0 0 7392.3 0 0 9587.7 0 0 10170 0 0 17565 0 0 7887.4 0 0 8422.4 0 0 8360.2 0 0 9570.4 0 0 6932.3 0 0 8447.8 0 0 7568.9 0 0 10098 0 0 9916.5 0 0 16762 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 33343000 33343000 0 0 NaN 3436 1885 601 601 5368 5718 6097 6776 6097 6776 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17540 6097 6776 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17540 6097 6776 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17540 Q9C0C9 401 Q9C0C9 Q9C0C9 E2/E3 hybrid ubiquitin-protein ligase UBE2O UBE2O sp|Q9C0C9|UBE2O_HUMAN E2/E3 hybrid ubiquitin-protein ligase UBE2O OS=Homo sapiens GN=UBE2O PE=1 SV=3 0.989842 20.1224 1.31389E-10 176.58 162.59 176.58 1 S VKRLLKKQVVRIMSCSPDTQCSRDHSMEDPD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX IMS(0.01)CS(0.99)PDT(0.001)QCSR IMS(-20.12)CS(20.12)PDT(-32.67)QCS(-94.7)R 5 2 0.66044 19196 0 0 30066 0 0 20762 0 0 29203 0 0 30072 0 0 20683 0 0 27434 0 0 23117 0 0 31617 0 0 7168.8 0 0 18170 0 0 28397 0 0 20925 0 0 29901 0 0 29934 0 0 21156 0 0 28167 0 0 23309 0 0 31020 0 0 7285.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23591000 23591000 0 0 NaN 3437 1886 401 401 1894 1999 2158 2418 2158 2418 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10714 2158 2418 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10714 2158 2418 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10714 Q9C0C9 839 Q9C0C9 Q9C0C9 E2/E3 hybrid ubiquitin-protein ligase UBE2O UBE2O sp|Q9C0C9|UBE2O_HUMAN E2/E3 hybrid ubiquitin-protein ligase UBE2O OS=Homo sapiens GN=UBE2O PE=1 SV=3 0.967571 15.5907 3.32001E-12 190.48 170.1 190.48 1 S LKNMTVEQLLTGSPTSPTVEPEKPTREKKFL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPPPPPPXXXXX NMTVEQLLTGSPT(0.027)S(0.968)PT(0.006)VEPEKPTR NMT(-139.61)VEQLLT(-93.68)GS(-45.7)PT(-15.59)S(15.59)PT(-22.3)VEPEKPT(-52.14)R 14 3 0.36894 3685.8 0 0 4759.8 0 0 3276.5 0 0 5497 0 0 4626.5 0 0 3828.4 0 0 4457.3 0 0 5480.7 0 0 6359.7 0 0 28323 0 0 3486.2 0 0 4500.7 0 0 3339 0 0 5572.3 0 0 4614.7 0 0 3985.9 0 0 4597.4 0 0 6286.9 0 0 6194.4 0 0 26796 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11613000 11613000 0 0 NaN 3438 1886 839 839 2873 3046 3262 3618 3262 3618 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20743 3262 3618 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20743 3262 3618 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20743 Q9C0C9 515 Q9C0C9 Q9C0C9 E2/E3 hybrid ubiquitin-protein ligase UBE2O UBE2O sp|Q9C0C9|UBE2O_HUMAN E2/E3 hybrid ubiquitin-protein ligase UBE2O OS=Homo sapiens GN=UBE2O PE=1 SV=3 0.999947 42.7373 0.0213178 68.846 8.0177 68.846 1 S STTSSQSGSGTSRKKSIPLSIKNLKRKHKRK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX S(1)IPLSIK S(42.74)IPLS(-42.74)IK 1 2 0.67748 9375 0 0 11470 0 0 10882 0 0 9942.7 0 0 22645 0 0 10445 0 0 20268 0 0 14219 0 0 9417.9 0 0 16938 0 0 8876.8 0 0 10826 0 0 11010 0 0 10310 0 0 22242 0 0 10526 0 0 20448 0 0 14626 0 0 9752.8 0 0 16278 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9237400 9237400 0 0 NaN 3439 1886 515 515 3854 4107 4383 4874 4383 4874 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18751 4383 4874 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18751 4383 4874 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18751 Q9C0E2 521 Q9C0E2 Q9C0E2 Exportin-4 XPO4 sp|Q9C0E2|XPO4_HUMAN Exportin-4 OS=Homo sapiens GN=XPO4 PE=1 SV=2 0.997352 25.8368 2.0103E-08 174.26 157.95 174.26 1 S RLHGQLQRHQQQLLASPGSSTVDNKMLDDLY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPXXXXXX HQQQLLAS(0.997)PGS(0.003)STVDNK HQQQLLAS(25.84)PGS(-25.84)S(-43.51)T(-55.5)VDNK 8 3 0.56754 20211 0 0 12570 0 0 21634 0 0 13331 0 0 12535 0 0 21380 0 0 13103 0 0 17712 0 0 14783 0 0 28268 0 0 19130 0 0 11879 0 0 21592 0 0 13771 0 0 13267 0 0 21078 0 0 13356 0 0 18760 0 0 14515 0 0 27027 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 61732000 61732000 0 0 NaN 3440 1887 521 521 1737 1831 1976 2202 1976 2202 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11763 1976 2202 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11763 1976 2202 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11763 Q9C0I1 564 Q9C0I1 Q9C0I1 Myotubularin-related protein 12 MTMR12 sp|Q9C0I1|MTMRC_HUMAN Myotubularin-related protein 12 OS=Homo sapiens GN=MTMR12 PE=1 SV=2 1 75.138 1.41389E-06 154.1 125.14 154.1 1 S KGQRKGMRFKHQRQLSLPLTQSKSSPKRGFF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX QLS(1)LPLTQSK QLS(75.14)LPLT(-75.14)QS(-123.1)K 3 3 0.49441 5757 0 0 3288.9 0 0 5122.6 0 0 3750 0 0 8998.7 0 0 6450.2 0 0 8168.7 0 0 6600.2 0 0 3238.7 0 0 2542.9 0 0 5445.2 0 0 3109.6 0 0 5240.6 0 0 3865.6 0 0 8886.7 0 0 6351.5 0 0 8219.9 0 0 6691.3 0 0 3404.8 0 0 2547.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 39607000 39607000 0 0 NaN 3441 1888 564 564 3076 3262 3490 3866 3490 3866 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18832 3490 3866 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18832 3490 3866 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18832 Q9GZN8 165 Q9GZN8 Q9GZN8 UPF0687 protein C20orf27 C20orf27 sp|Q9GZN8|CT027_HUMAN UPF0687 protein C20orf27 OS=Homo sapiens GN=C20orf27 PE=1 SV=3 1 70.7915 5.44368E-23 268.65 256.87 268.65 1 S LLDGVKCVGAELEYDSEHSDWHGFD______ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPXXXXXX CVGAELEYDS(1)EHSDWHGFD CVGAELEY(-173.73)DS(70.79)EHS(-70.79)DWHGFD 10 3 -1.5633 9042.8 0 0 9418.6 0 0 9410.6 0 0 8524.1 0 0 8427.5 0 0 9764.5 0 0 8473.4 0 0 10439 0 0 10366 0 0 73633 0 0 8558.2 0 0 8892.3 0 0 9442.8 0 0 8826.8 0 0 8612.7 0 0 9879.2 0 0 8674.8 0 0 12663 0 0 10148 0 0 69576 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 34624000 34624000 0 0 NaN 3442 1889 165 165 627 668 712 789;790 712 789 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18490 712 789 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18490 712 789 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18490 Q9GZR1 352 Q9GZR1 Q9GZR1 Sentrin-specific protease 6 SENP6 sp|Q9GZR1|SENP6_HUMAN Sentrin-specific protease 6 OS=Homo sapiens GN=SENP6 PE=1 SV=2 0.976983 16.2788 2.33127E-16 216.76 199.27 216.76 1 S DDDDDNDRTNRRESISPQPADSACSSPAPST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP ES(0.023)IS(0.977)PQPADSACSSPAPSTGK ES(-16.28)IS(16.28)PQPADS(-57.18)ACS(-118.13)S(-138.89)PAPS(-179.4)T(-183.31)GK 4 3 -1.3083 19639 0 0 9962.5 0 0 22473 0 0 8078.6 0 0 10240 0 0 20291 0 0 10501 0 0 14786 0 0 9052.1 0 0 8281.1 0 0 18594 0 0 9400.5 0 0 22317 0 0 8606.1 0 0 11116 0 0 19740 0 0 10637 0 0 15295 0 0 8993.2 0 0 8139.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 57948000 57948000 0 0 NaN 3443 1890 352 352 1153 1213 1305 1436 1305 1436 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11273 1305 1436 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11273 1305 1436 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11273 Q9GZR2 111 Q9GZR2 Q9GZR2 RNA exonuclease 4 REXO4 sp|Q9GZR2|REXO4_HUMAN RNA exonuclease 4 OS=Homo sapiens GN=REXO4 PE=1 SV=2 0.904886 9.78348 0.00510984 96.665 53.223 96.665 1 S SKKKPKIIQQNKKETSPQVKGEEMPAGKDQE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX ET(0.095)S(0.905)PQVK ET(-9.78)S(9.78)PQVK 3 2 -0.55773 26705 0 0 42039 0 0 25803 0 0 44697 0 0 20515 0 0 25802 0 0 20277 0 0 32792 0 0 45864 0 0 7249.5 0 0 25266 0 0 39728 0 0 25969 0 0 45427 0 0 21152 0 0 26807 0 0 21353 0 0 32840 0 0 44169 0 0 7585.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23276000 23276000 0 0 NaN 3444 1891 111 111 1196 1258 1357 1504 1357 1504 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8441 1357 1504 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8441 1357 1504 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8441 Q9GZR2 15 Q9GZR2 Q9GZR2 RNA exonuclease 4 REXO4 sp|Q9GZR2|REXO4_HUMAN RNA exonuclease 4 OS=Homo sapiens GN=REXO4 PE=1 SV=2 0.730595 4.33271 0.0394136 47.113 33.083 47.113 1 S _MGKAKVPASKRAPSSPVAKPGPVKTLTRKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPXXXXXX RAPS(0.269)S(0.731)PVAKPGPVK RAPS(-4.33)S(4.33)PVAKPGPVK 5 4 0.19394 9568.6 0 0 17846 0 0 11721 0 0 17938 0 0 8366.2 0 0 12139 0 0 9290 0 0 15250 0 0 19100 0 0 3978 0 0 9062.4 0 0 16859 0 0 11640 0 0 18320 0 0 8710.5 0 0 12473 0 0 9680.7 0 0 15296 0 0 18430 0 0 4098.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20514000 20514000 0 0 NaN 3445 1891 15 15 3185 3378 3610 4001 3610 4001 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10039 3610 4001 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10039 3610 4001 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10039 Q9GZT3 15 Q9GZT3 Q9GZT3 SRA stem-loop-interacting RNA-binding protein, mitochondrial SLIRP sp|Q9GZT3|SLIRP_HUMAN SRA stem-loop-interacting RNA-binding protein, mitochondrial OS=Homo sapiens GN=SLIRP PE=1 SV=1 1 89.4403 0.00651677 89.44 59.631 89.44 1 S _MAASAARGAAALRRSINQPVAFVRRIPWTA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPXXXXXX S(1)INQPVAFVR S(89.44)INQPVAFVR 1 2 -0.52154 10881 0 0 10955 0 0 9671.5 0 0 13087 0 0 15531 0 0 10015 0 0 16687 0 0 12098 0 0 13289 0 0 52240 0 0 10292 0 0 10361 0 0 9882.1 0 0 13258 0 0 15428 0 0 10300 0 0 16837 0 0 13629 0 0 13256 0 0 49471 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12684000 12684000 0 0 NaN 3446 1892 15 15 3852 4105 4381 4872 4381 4872 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16664 4381 4872 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16664 4381 4872 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16664 Q9GZU8 167 Q9GZU8 Q9GZU8 Protein FAM192A FAM192A sp|Q9GZU8|F192A_HUMAN Protein FAM192A OS=Homo sapiens GN=FAM192A PE=1 SV=1 0.989179 19.6589 0.00694733 82.55 53.807 82.55 1 S LLAGAVKHKSSESGNSVKRLKPDPEPDDKNQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX SSES(0.011)GNS(0.989)VKR S(-42.44)S(-41.83)ES(-19.66)GNS(19.66)VKR 7 3 -0.31193 8909.7 0 0 7829 0 0 9543.2 0 0 9718.9 0 0 6659.6 0 0 9191.8 0 0 6259.8 0 0 7607.6 0 0 7890.8 0 0 2761 0 0 8433.2 0 0 7406.5 0 0 9536.9 0 0 9855.3 0 0 6924.3 0 0 9222.3 0 0 6435.8 0 0 7775.5 0 0 7716.7 0 0 2775.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13503000 13503000 0 0 NaN 3447 1893 167 167 4340 4626 4929 5473 4929 5473 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5580 4929 5473 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5580 4929 5473 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5580 Q9GZY6 102 Q9GZY6 Q9GZY6 Linker for activation of T-cells family member 2 LAT2 sp|Q9GZY6|NTAL_HUMAN Linker for activation of T-cells family member 2 OS=Homo sapiens GN=LAT2 PE=1 SV=1 0.959161 13.7091 0.0275814 51.135 27.385 51.135 1 S LEDPASSRYQNFSKGSRHGSEEAYIDPIAME X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPXXXXXXXXXXXXXX YQNFS(0.041)KGS(0.959)R Y(-50.3)QNFS(-13.71)KGS(13.71)R 8 3 0.56462 35015 0 0 8346.4 0 0 38583 0 0 7222.5 0 0 11447 0 0 37037 0 0 13003 0 0 19637 0 0 9071.8 0 0 2127.7 0 0 33147 0 0 7878.1 0 0 38316 0 0 7963.5 0 0 13237 0 0 35579 0 0 13054 0 0 20436 0 0 9117.9 0 0 2458 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26971000 26971000 0 0 NaN 3448 1894 102 102 5417 5770 6160 6855 6160 6855 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10362 6160 6855 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10362 6160 6855 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10362 Q9GZY8 155 Q9GZY8 Q9GZY8 Mitochondrial fission factor MFF sp|Q9GZY8|MFF_HUMAN Mitochondrial fission factor OS=Homo sapiens GN=MFF PE=1 SV=1 0.983024 17.6273 1.1668E-06 164.06 127.47 164.06 1 S QNEEIRAVGRLKRERSMSENAVRQNGQLVRN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX ERS(0.983)MS(0.017)ENAVR ERS(17.63)MS(-17.63)ENAVR 3 2 -0.36819 19694 0 0 16946 0 0 19607 0 0 17681 0 0 16132 0 0 21990 0 0 16499 0 0 18426 0 0 18707 0 0 3017.8 0 0 18636 0 0 16012 0 0 19706 0 0 18179 0 0 16583 0 0 21810 0 0 16837 0 0 18712 0 0 18364 0 0 3268.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26169000 26169000 0 0 NaN 3449 1895 155 155 1134 1193 1283 1410 1283 1410 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6550 1283 1410 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6550 1283 1410 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6550 Q9H019 41 Q9H019 Q9H019 Mitochondrial fission regulator 1-like MTFR1L sp|Q9H019|MFR1L_HUMAN Mitochondrial fission regulator 1-like OS=Homo sapiens GN=MTFR1L PE=1 SV=2 0.902721 9.67564 0.0286735 54.253 32.719 54.253 1 S RRIGTNLPLKPCARASFETLPNISDLCLRDV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPXX AS(0.903)FET(0.097)LPNISDLCLR AS(9.68)FET(-9.68)LPNIS(-51.02)DLCLR 2 3 -0.41487 6053.4 0 0 11261 0 0 6855.1 0 0 12519 0 0 5463.7 0 0 7394.4 0 0 5536.3 0 0 8332 0 0 12310 0 0 15960 0 0 5731.1 0 0 10645 0 0 6839.7 0 0 12695 0 0 5634.2 0 0 7682.3 0 0 5817.5 0 0 8802.2 0 0 11859 0 0 15222 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28697000 28697000 0 0 NaN 3450 1896 41 41 455 484 519 581 519 581 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23545 519 581 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23545 519 581 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23545 Q9H019 237 Q9H019 Q9H019 Mitochondrial fission regulator 1-like MTFR1L sp|Q9H019|MFR1L_HUMAN Mitochondrial fission regulator 1-like OS=Homo sapiens GN=MTFR1L PE=1 SV=2 0.601281 1.7841 3.72155E-08 172.57 141.92 172.57 1 S CSSSEEDDCVSLSKASSFADMMGILKDFHRM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPXXXXX AS(0.601)S(0.399)FADMMGILK AS(1.78)S(-1.78)FADMMGILK 2 3 -0.36859 4260.8 0 0 5199.4 0 0 4473.5 0 0 6314.3 0 0 7105.3 0 0 4004.5 0 0 6422.5 0 0 5642.7 0 0 5735.9 0 0 30045 0 0 4032.6 0 0 4918 0 0 4523.3 0 0 6378.2 0 0 7044.8 0 0 4194.1 0 0 6551.6 0 0 6501.9 0 0 5688.7 0 0 28421 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28718000 28718000 0 0 NaN 3451 1896 237 237 495 526 566 631 566 631 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23863 566 631 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23863 566 631 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23863 Q9H019 103 Q9H019 Q9H019 Mitochondrial fission regulator 1-like MTFR1L sp|Q9H019|MFR1L_HUMAN Mitochondrial fission regulator 1-like OS=Homo sapiens GN=MTFR1L PE=1 SV=2 1 97.8134 0.00352353 97.813 57.241 97.813 1 S HTWKPSPLIVMQRNASVPNLRGSEERLLALK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX NAS(1)VPNLR NAS(97.81)VPNLR 3 2 1.3052 35354 0 0 34358 0 0 36904 0 0 31129 0 0 51392 0 0 35713 0 0 52150 0 0 41356 0 0 36696 0 0 5224.6 0 0 33460 0 0 32438 0 0 37250 0 0 32233 0 0 51294 0 0 35673 0 0 52625 0 0 41422 0 0 36864 0 0 5876.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 62245000 62245000 0 0 NaN 3452 1896 103 103 2781 2950 3160 3510 3160 3510 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11208 3160 3510 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11208 3160 3510 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11208 Q9H063 68 Q9H063 Q9H063 Repressor of RNA polymerase III transcription MAF1 homolog MAF1 sp|Q9H063|MAF1_HUMAN Repressor of RNA polymerase III transcription MAF1 homolog OS=Homo sapiens GN=MAF1 PE=1 SV=2 0.794278 7.47233 4.7051E-13 211.43 194.08 211.43 1 S PHVLEALSPPQTSGLSPSRLSKSQGGEEEGP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX QFCQEGQPHVLEALSPPQT(0.022)S(0.041)GLS(0.794)PS(0.142)R QFCQEGQPHVLEALS(-47.27)PPQT(-15.52)S(-12.84)GLS(7.47)PS(-7.47)R 23 3 0.62247 3368.5 0 0 2674.2 0 0 3646.8 0 0 3345.4 0 0 2772 0 0 3339 0 0 2844.8 0 0 4645.4 0 0 3042.1 0 0 19451 0 0 3188.5 0 0 2530 0 0 3645.5 0 0 3393.9 0 0 2865.9 0 0 3400.1 0 0 2897.7 0 0 5195.1 0 0 2993.3 0 0 18423 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 44039000 44039000 0 0 NaN 3453 1897 68 68 3026 3207 3430 3803 3430 3803 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18168 3430 3803 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18168 3430 3803 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18168 Q9H0B6 582 Q9H0B6 Q9H0B6 Kinesin light chain 2 KLC2 sp|Q9H0B6|KLC2_HUMAN Kinesin light chain 2 OS=Homo sapiens GN=KLC2 PE=1 SV=1 0.995406 23.3585 5.53643E-09 176.61 124.66 176.61 1 S GTPQEPPNPRMKRASSLNFLNKSVEEPTQPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX AS(0.005)S(0.995)LNFLNK AS(-23.36)S(23.36)LNFLNK 3 2 0.27656 15325 0 0 59032 0 0 16196 0 0 57193 0 0 13132 0 0 14681 0 0 13185 0 0 28919 0 0 62135 0 0 16960 0 0 14505 0 0 55755 0 0 16221 0 0 58154 0 0 13554 0 0 16824 0 0 14759 0 0 28967 0 0 59232 0 0 16639 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 115700000 115700000 0 0 NaN 3454 1899 582 582 502;3201 533;3395 573;3629 639;4025 573 639 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19281 573 639 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19281 573 639 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19281 Q9H0C5 30 Q9H0C5 Q9H0C5 BTB/POZ domain-containing protein 1 BTBD1 sp|Q9H0C5|BTBD1_HUMAN BTB/POZ domain-containing protein 1 OS=Homo sapiens GN=BTBD1 PE=1 SV=1 0.861763 9.27802 9.9268E-06 77.858 66.335 77.858 1 S GAEAEPGPAGPPPPPSPSSLGPLLPLQREPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPXXX ASLGPAAAGEQASGAEAEPGPAGPPPPPS(0.862)PS(0.102)S(0.036)LGPLLPLQR AS(-36.38)LGPAAAGEQAS(-36.38)GAEAEPGPAGPPPPPS(9.28)PS(-9.28)S(-13.78)LGPLLPLQR 29 4 0.80356 2654.5 0 0 2844.7 0 0 2457.9 0 0 3011.8 0 0 2557.9 0 0 3106.5 0 0 2461.6 0 0 3019.3 0 0 3421.4 0 0 32625 0 0 2511.1 0 0 2688.3 0 0 2487.3 0 0 3083.7 0 0 2589.4 0 0 3169.9 0 0 2536.6 0 0 4015 0 0 3335.2 0 0 30790 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 54306000 54306000 0 0 NaN 3455 1900 30 30 472 502 539 603 539 603 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23767 539 603 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23767 539 603 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23767 Q9H0C8 13 Q9H0C8 Q9H0C8 Integrin-linked kinase-associated serine/threonine phosphatase 2C ILKAP sp|Q9H0C8|ILKAP_HUMAN Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Homo sapiens GN=ILKAP PE=1 SV=1 1 139.278 2.2783E-11 139.28 127.51 139.28 1 S ___MDLFGDLPEPERSPRPAAGKEAQKGPLL X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPXXXXXXXX MDLFGDLPEPERS(1)PRPAAGK MDLFGDLPEPERS(139.28)PRPAAGK 13 3 -0.43589 34634 0 0 32455 0 0 35193 0 0 35562 0 0 29961 0 0 35100 0 0 28930 0 0 35599 0 0 38442 0 0 49857 0 0 32775 0 0 30677 0 0 35339 0 0 36317 0 0 30708 0 0 35303 0 0 29758 0 0 37192 0 0 37527 0 0 47770 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 132030000 132030000 0 0 NaN 3456 1901 13 13 2672 2823;2824 3028;3029 3373;3374 3029 3374 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22239 3029 3374 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22239 3029 3374 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22239 Q9H0D6 475 Q9H0D6 Q9H0D6 5'-3' exoribonuclease 2 XRN2 sp|Q9H0D6|XRN2_HUMAN 5'-3' exoribonuclease 2 OS=Homo sapiens GN=XRN2 PE=1 SV=1 0.984785 19.1343 1.33986E-12 209.36 193.75 209.36 1 S AAYEMRMQNNSSPSISPNTSFTSDGSPSPLG X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPPPPPP MQNNS(0.001)S(0.002)PS(0.012)IS(0.985)PNTSFTSDGSPSPLGGIK MQNNS(-32.49)S(-26.56)PS(-19.13)IS(19.13)PNT(-33.41)S(-48.23)FT(-84.34)S(-104.97)DGS(-124.32)PS(-136.13)PLGGIK 10 3 1.2235 8410.8 0 0 8311.6 0 0 9357.1 0 0 7075 0 0 10039 0 0 9159.2 0 0 11645 0 0 11432 0 0 8399.7 0 0 43974 0 0 7962.3 0 0 7844.6 0 0 9379.1 0 0 7373.4 0 0 10167 0 0 9199 0 0 11688 0 0 12705 0 0 8425.6 0 0 41672 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 24163000 24163000 0 0 NaN 3457 1902 475 475 2732 2897;2898 3106;3107 3453;3454 3107 3454 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19823 3107 3454 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19823 3107 3454 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19823 Q9H0D6 448 Q9H0D6 Q9H0D6 5'-3' exoribonuclease 2 XRN2 sp|Q9H0D6|XRN2_HUMAN 5'-3' exoribonuclease 2 OS=Homo sapiens GN=XRN2 PE=1 SV=1 0.999869 38.8158 3.30123E-12 212.43 188.21 212.43 1 S TPSGILTPHALGSRNSPGSQVASNPRQAAYE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPXXXXX NS(1)PGSQVASNPR NS(38.82)PGS(-38.82)QVAS(-74.86)NPR 2 2 0.19786 12049 0 0 12130 0 0 11169 0 0 11687 0 0 11539 0 0 12020 0 0 12747 0 0 13200 0 0 13500 0 0 4067.9 0 0 11398 0 0 11456 0 0 11304 0 0 12032 0 0 11706 0 0 12056 0 0 12938 0 0 13317 0 0 13288 0 0 4135.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20519000 20519000 0 0 NaN 3458 1902 448 448 2925 3101 3321 3681 3321 3681 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6134 3321 3681 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6134 3321 3681 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6134 Q9H0E3 442 Q9H0E3 Q9H0E3 Histone deacetylase complex subunit SAP130 SAP130 sp|Q9H0E3|SP130_HUMAN Histone deacetylase complex subunit SAP130 OS=Homo sapiens GN=SAP130 PE=1 SV=1 0.630984 2.38086 0.0100244 71.241 35.134 71.241 1 S NIPVAKVVPQQITHTSPRIQPDYPAERSSLI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX VVPQQIT(0.004)HT(0.365)S(0.631)PR VVPQQIT(-21.65)HT(-2.38)S(2.38)PR 10 3 0.029916 16604 0 0 20334 0 0 17081 0 0 24347 0 0 14494 0 0 16328 0 0 15749 0 0 17923 0 0 22287 0 0 3604.4 0 0 15714 0 0 19231 0 0 17143 0 0 24624 0 0 14886 0 0 16751 0 0 16149 0 0 18025 0 0 21714 0 0 3808.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 56040000 56040000 0 0 NaN 3459 1903 442 442 5310 5658 6034 6706 6034 6706 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11033 6034 6706 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11033 6034 6706 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11033 Q9H0F6 165 Q9H0F6 Q9H0F6 Sharpin SHARPIN sp|Q9H0F6|SHRPN_HUMAN Sharpin OS=Homo sapiens GN=SHARPIN PE=1 SV=1 0.984453 18.0282 0.035065 49.924 28.83 49.924 1 S ASTLKGPPPEADLPRSPGNLTEREELAGSLA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.984)PGNLT(0.016)EREELAGSLAR S(18.03)PGNLT(-18.03)EREELAGS(-43.32)LAR 1 3 0.76051 6071.2 0 0 6419 0 0 6897.6 0 0 7298 0 0 6647.7 0 0 7287.5 0 0 5868.3 0 0 6621.7 0 0 6858.4 0 0 7237.8 0 0 5748 0 0 6068.8 0 0 6893.4 0 0 7439.5 0 0 6750.8 0 0 7310.4 0 0 6037.9 0 0 6886 0 0 6725.2 0 0 6968.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7093900 7093900 0 0 NaN 3460 1904 165 165 4106 4378 4668 5183 4668 5183 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14837 4668 5183 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14837 4668 5183 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14837 Q9H0K1 587 Q9H0K1 Q9H0K1 Serine/threonine-protein kinase SIK2 SIK2 sp|Q9H0K1|SIK2_HUMAN Serine/threonine-protein kinase SIK2 OS=Homo sapiens GN=SIK2 PE=1 SV=1 0.998661 28.8117 5.74419E-07 153.06 126.09 153.06 1 S VHNRSPVSFREGRRASDTSLTQGIVAFRQHL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX RAS(0.999)DT(0.001)SLTQGIVAFR RAS(28.81)DT(-28.81)S(-45.91)LT(-80.85)QGIVAFR 3 3 0.17206 4535.2 0 0 4036.6 0 0 3567.6 0 0 4132.9 0 0 4237.2 0 0 3842.6 0 0 5478.3 0 0 3341.5 0 0 4132.4 0 0 5356.4 0 0 4287.8 0 0 3813.8 0 0 3658.5 0 0 4233 0 0 4276.7 0 0 3868.4 0 0 5480 0 0 3532.6 0 0 4134.5 0 0 5121.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7343600 7343600 0 0 NaN 3461 1906 587 587 3190 3383 3615 4006 3615 4006 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17700 3615 4006 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17700 3615 4006 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17700 Q9H0L4 563 Q9H0L4 Q9H0L4 Cleavage stimulation factor subunit 2 tau variant CSTF2T sp|Q9H0L4|CSTFT_HUMAN Cleavage stimulation factor subunit 2 tau variant OS=Homo sapiens GN=CSTF2T PE=1 SV=1 0.985174 19.0493 2.1001E-12 191.15 167.35 191.15 1 S IQGASKQGGSQPSSFSPGQSQVTPQDQEKAA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPPPPXX QGGSQPS(0.002)S(0.012)FS(0.985)PGQSQVTPQDQEK QGGS(-33.94)QPS(-26.58)S(-19.05)FS(19.05)PGQS(-68.48)QVT(-123.78)PQDQEK 10 3 -1.0025 10975 0 0 8304.1 0 0 12663 0 0 10216 0 0 8951 0 0 11893 0 0 9955.3 0 0 10838 0 0 9818.9 0 0 17613 0 0 10392 0 0 7855.5 0 0 12611 0 0 10400 0 0 9316.8 0 0 11866 0 0 10082 0 0 11443 0 0 9694.1 0 0 16836 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 39297000 39297000 0 0 NaN 3462 1907 563 563 3032 3214 3437 3810 3437 3810 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11646 3437 3810 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11646 3437 3810 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11646 Q9H0W8 450 Q9H0W8 Q9H0W8 Protein SMG9 SMG9 sp|Q9H0W8|SMG9_HUMAN Protein SMG9 OS=Homo sapiens GN=SMG9 PE=1 SV=1 0.5 0 0.000448971 100.48 86.394 100.48 1 S DSEAESENPPRAGPGSSPLFSLLPGYRGHPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPXXXX AGPGS(0.5)S(0.5)PLFSLLPGYR AGPGS(0)S(0)PLFS(-69.49)LLPGY(-91.69)R 5 3 0.15271 3016.4 0 0 3830.9 0 0 3320.9 0 0 3877 0 0 4055.6 0 0 2149.2 0 0 3342 0 0 5084.2 0 0 4404.3 0 0 15197 0 0 2855.5 0 0 3619.1 0 0 3334.1 0 0 3950.2 0 0 4063.1 0 0 2296.8 0 0 3465.3 0 0 5444 0 0 4300.7 0 0 14427 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29531000 29531000 0 0 NaN 3463 1909 450 450 219 233 251 279 251 279 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23774 251 279 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23774 251 279 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23774 Q9H0W8 451 Q9H0W8 Q9H0W8 Protein SMG9 SMG9 sp|Q9H0W8|SMG9_HUMAN Protein SMG9 OS=Homo sapiens GN=SMG9 PE=1 SV=1 0.5 0 0.000448971 100.48 86.394 100.48 1 S SEAESENPPRAGPGSSPLFSLLPGYRGHPSF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AGPGS(0.5)S(0.5)PLFSLLPGYR AGPGS(0)S(0)PLFS(-69.49)LLPGY(-91.69)R 6 3 0.15271 3016.4 0 0 3830.9 0 0 3320.9 0 0 3877 0 0 4055.6 0 0 2149.2 0 0 3342 0 0 5084.2 0 0 4404.3 0 0 15197 0 0 2855.5 0 0 3619.1 0 0 3334.1 0 0 3950.2 0 0 4063.1 0 0 2296.8 0 0 3465.3 0 0 5444 0 0 4300.7 0 0 14427 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29531000 29531000 0 0 NaN 3464 1909 451 451 219 233 251 279 251 279 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23774 251 279 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23774 251 279 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23774 Q9H0W8 32 Q9H0W8 Q9H0W8 Protein SMG9 SMG9 sp|Q9H0W8|SMG9_HUMAN Protein SMG9 OS=Homo sapiens GN=SMG9 PE=1 SV=1 0.999999 60.9725 0.00162102 97.068 79.58 97.068 1 S RRRWKEPGSGGPQNLSGPGGRERDYIAPWER X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPXXXXXXXXXX WKEPGSGGPQNLS(1)GPGGR WKEPGS(-60.97)GGPQNLS(60.97)GPGGR 13 3 -0.58553 23363 0 0 14323 0 0 25140 0 0 15421 0 0 24318 0 0 24927 0 0 22365 0 0 22241 0 0 18018 0 0 10383 0 0 22114 0 0 13537 0 0 25199 0 0 15919 0 0 24695 0 0 24547 0 0 22741 0 0 22727 0 0 17963 0 0 10291 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22074000 22074000 0 0 NaN 3465 1909 32 32 5339 5687 6065 6739 6065 6739 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13175 6065 6739 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13175 6065 6739 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13175 Q9H165 86 Q9H165 Q9H165 B-cell lymphoma/leukemia 11A BCL11A sp|Q9H165|BC11A_HUMAN B-cell lymphoma/leukemia 11A OS=Homo sapiens GN=BCL11A PE=1 SV=2 0.970161 15.1205 1.39661E-05 136.04 111.45 136.04 1 S CNGSLCLEKAVDKPPSPSPIEMKKASNPVEV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPXXXXXXXX AVDKPPS(0.97)PS(0.03)PIEMK AVDKPPS(15.12)PS(-15.12)PIEMK 7 3 -0.02387 42436 0 0 6058.4 0 0 45144 0 0 6334.1 0 0 9223 0 0 42233 0 0 9615.4 0 0 19211 0 0 6123.7 0 0 10538 0 0 40166 0 0 5724.7 0 0 44863 0 0 7063.7 0 0 11483 0 0 40462 0 0 9673.2 0 0 20479 0 0 6190.4 0 0 10367 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 42135000 42135000 0 0 NaN 3466 1910 86 86 550 586 627 700 627 700 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15602 627 700 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15602 627 700 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15602 Q9H165 608 Q9H165 Q9H165 B-cell lymphoma/leukemia 11A BCL11A sp|Q9H165|BC11A_HUMAN B-cell lymphoma/leukemia 11A OS=Homo sapiens GN=BCL11A PE=1 SV=2 0.999227 31.1605 0.00482866 88.319 64.714 88.319 1 S ESDRIDDGTVNGRGCSPGESASGGLSKKLLL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX GCS(0.999)PGES(0.001)ASGGLSK GCS(31.16)PGES(-31.16)AS(-50.77)GGLS(-83.77)K 3 3 -0.63455 17648 0 0 14600 0 0 17640 0 0 15109 0 0 15251 0 0 19925 0 0 12814 0 0 19078 0 0 13735 0 0 3900.5 0 0 16699 0 0 13795 0 0 17729 0 0 15560 0 0 15584 0 0 19754 0 0 13185 0 0 19287 0 0 13513 0 0 4114.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19647000 19647000 0 0 NaN 3467 1910 608 608 1379 1455 1564 1728 1564 1728 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10321 1564 1728 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10321 1564 1728 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10321 Q9H165 630 Q9H165 Q9H165 B-cell lymphoma/leukemia 11A BCL11A sp|Q9H165|BC11A_HUMAN B-cell lymphoma/leukemia 11A OS=Homo sapiens GN=BCL11A PE=1 SV=2 0.999636 36.6533 0.000127052 113.47 91.916 113.47 1 S GGLSKKLLLGSPSSLSPFSKRIKLEKEFDLP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPXXXXXXXXXXX LLLGSPSSLS(1)PFSK LLLGS(-68.91)PS(-52.98)S(-38.46)LS(36.65)PFS(-36.65)K 10 3 -0.10292 6730.9 0 0 3668.3 0 0 6798.8 0 0 4963.6 0 0 4712.2 0 0 6678.9 0 0 4347.6 0 0 5399.4 0 0 4154 0 0 17346 0 0 6369.4 0 0 3472.7 0 0 6815.9 0 0 5045 0 0 4899.8 0 0 6634.7 0 0 4437.7 0 0 5988.2 0 0 4106.9 0 0 16458 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24592000 24592000 0 0 NaN 3468 1910 630 630 2442 2580 2774 3097 2774 3097 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23629 2774 3097 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23629 2774 3097 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23629 Q9H1A4 688 Q9H1A4 Q9H1A4 Anaphase-promoting complex subunit 1 ANAPC1 sp|Q9H1A4|APC1_HUMAN Anaphase-promoting complex subunit 1 OS=Homo sapiens GN=ANAPC1 PE=1 SV=1 0.961145 13.9334 6.69079E-07 145.05 128.74 145.05 1 S DRLAWTRNFDFEGSLSPVIAPKKARPSETGS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPXXXXXXXXX NFDFEGS(0.039)LS(0.961)PVIAPK NFDFEGS(-13.93)LS(13.93)PVIAPK 9 3 -0.2077 8257.1 0 0 9405.7 0 0 8660.2 0 0 9494.2 0 0 5701.6 0 0 8101 0 0 6784.5 0 0 8557.1 0 0 10249 0 0 21671 0 0 7814.8 0 0 8885.7 0 0 8663 0 0 9720.5 0 0 5979.3 0 0 8228.8 0 0 6948.9 0 0 9218.7 0 0 9966.2 0 0 20604 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 54144000 54144000 0 0 NaN 3469 1911 688 688 2806 2975 3187 3539 3187 3539 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22898 3187 3539 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22898 3187 3539 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22898 Q9H1B7 547 Q9H1B7 Q9H1B7 Interferon regulatory factor 2-binding protein-like IRF2BPL sp|Q9H1B7|I2BPL_HUMAN Interferon regulatory factor 2-binding protein-like OS=Homo sapiens GN=IRF2BPL PE=1 SV=1 0.999998 56.8522 2.64273E-11 208.98 152.33 208.98 1 S PSGRGAAASLRKRKASPEPPDSAEGALKLGE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX KAS(1)PEPPDSAEGALK KAS(56.85)PEPPDS(-56.85)AEGALK 3 3 1.0531 12735 0 0 31170 0 0 14224 0 0 29183 0 0 19318 0 0 10943 0 0 21579 0 0 21853 0 0 32388 0 0 13688 0 0 12056 0 0 29434 0 0 14303 0 0 29793 0 0 19346 0 0 11946 0 0 22153 0 0 21910 0 0 31499 0 0 13394 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 40518000 40518000 0 0 NaN 3470 1912 547 547 2014 2131 2296 2563 2296 2563 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12431 2296 2563 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12431 2296 2563 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12431 Q9H1E3 181 Q9H1E3 Q9H1E3 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 NUCKS1 sp|Q9H1E3|NUCKS_HUMAN Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 OS=Homo sapiens GN=NUCKS1 PE=1 SV=1 0.999998 56.893 2.96091E-05 134.49 113.59 134.49 1;2 S EKKMPKPRLKATVTPSPVKGKGKVGRPTASK X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPXXXXXXXXXX AT(0.003)VT(0.997)PS(1)PVKGK AT(-25.77)VT(25.77)PS(56.89)PVKGK 6 2 1.2521 105990 28513 0 79623 25938 0 104140 29419 0 80547 25002 0 72570 26150 0 96710 26950 0 84719 25394 0 96616 27458 0 83138 27538 0 12839 55577 0 100290 26984 0 75223 24497 0 104610 29530 0 82907 25760 0 75678 26722 0 96239 27038 0 85610 25944 0 97303 29198 0 82099 27081 0 14325 52968 0 3 2 0 3 2 0 3 2 0 3 2 0 3 2 0 3 2 0 3 2 0 3 2 0 3 2 0 3 2 0 3014300000 2990200000 24049000 0 NaN 3471 1913 181 181 546;547;2414 580;581;582;583;2551 621;622;623;624;2744 694;695;696;697;3064 624 697 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11372 624 697 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11372 624 697 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11372 Q9H1E3 214 Q9H1E3 Q9H1E3 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 NUCKS1 sp|Q9H1E3|NUCKS_HUMAN Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 OS=Homo sapiens GN=NUCKS1 PE=1 SV=1 1 190.241 1.037E-10 190.24 159.82 190.24 1 S KEKTPSPKEEDEEPESPPEKKTSTSPPPEKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPXXXXXXXXXX EEDEEPES(1)PPEKK EEDEEPES(190.24)PPEKK 8 3 -0.19269 72178 0 0 61584 0 0 71172 0 0 58295 0 0 61749 0 0 69554 0 0 68110 0 0 64826 0 0 61224 0 0 17867 0 0 68295 0 0 58157 0 0 71620 0 0 60238 0 0 63303 0 0 69190 0 0 68836 0 0 65746 0 0 60702 0 0 18324 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 100010000 100010000 0 0 NaN 3472 1913 214 214 919 973 1055 1164;1165 1055 1164 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9465 1055 1164 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9465 1055 1164 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9465 Q9H1E3 58 Q9H1E3 Q9H1E3 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 NUCKS1 sp|Q9H1E3|NUCKS_HUMAN Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 OS=Homo sapiens GN=NUCKS1 PE=1 SV=1 0.99994 42.1924 7.36651E-05 119.87 95.862 119.87 2 S EAKNKRRSGKNSQEDSEDSEDKDVKTKKDDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPXXXXXX NSQEDS(1)EDS(1)EDKDVK NS(-42.19)QEDS(42.19)EDS(62.86)EDKDVK 6 3 -0.20357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3473 1913 58 58 2933 3110;3111 3331 3693 3331 3693 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9641 3331 3693 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9641 3331 3693 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9641 Q9H1E3 61 Q9H1E3 Q9H1E3 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 NUCKS1 sp|Q9H1E3|NUCKS_HUMAN Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 OS=Homo sapiens GN=NUCKS1 PE=1 SV=1 0.999999 62.864 3.05313E-11 207.43 184.96 119.87 1;2 S NKRRSGKNSQEDSEDSEDKDVKTKKDDSHSA X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPXXXXXXXXX NSQEDS(1)EDS(1)EDKDVK NS(-42.19)QEDS(42.19)EDS(62.86)EDKDVK 9 3 -0.20357 58659 0 0 35434 0 0 61356 0 0 34860 0 0 29375 0 0 56997 0 0 27965 0 0 42726 0 0 42031 0 0 12056 0 0 55516 0 0 33470 0 0 61233 0 0 36184 0 0 31691 0 0 55987 0 0 28919 0 0 43774 0 0 40875 0 0 12341 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 44314000 44314000 0 0 1.5771 3474 1913 61 61 2933 3110;3111 3330;3331 3691;3692;3693 3331 3693 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9641 3330 3691 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8630 3330 3691 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8630 Q9H1E3 223 Q9H1E3 Q9H1E3 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 NUCKS1 sp|Q9H1E3|NUCKS_HUMAN Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 OS=Homo sapiens GN=NUCKS1 PE=1 SV=1 0.736421 4.47715 4.75045E-06 156.14 130.7 156.14 1 S EDEEPESPPEKKTSTSPPPEKSGDEGSEDEA X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX T(0.001)ST(0.263)S(0.736)PPPEK T(-30.97)S(-33.63)T(-4.48)S(4.48)PPPEK 4 2 0.63691 66905 0 0 41741 0 0 70874 0 0 42445 0 0 53967 0 0 75462 0 0 62441 0 0 58010 0 0 49703 0 0 5424.8 0 0 63324 0 0 39435 0 0 70947 0 0 44068 0 0 55872 0 0 73957 0 0 62804 0 0 59028 0 0 49582 0 0 6450.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 112690000 112690000 0 0 NaN 3475 1913 223 223 4972 5301 5648 6277 5648 6277 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7912 5648 6277 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7912 5648 6277 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7912 Q9H1E3 19 Q9H1E3 Q9H1E3 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 NUCKS1 sp|Q9H1E3|NUCKS_HUMAN Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 OS=Homo sapiens GN=NUCKS1 PE=1 SV=1 1 91.3744 2.76132E-08 171.06 157.47 171.06 1 S PVRNRKVVDYSQFQESDDADEDYGRDSGPPT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPXXXXXX VVDYSQFQES(1)DDADEDYGR VVDY(-111)S(-91.37)QFQES(91.37)DDADEDY(-108.86)GR 10 3 0.3125 41163 0 0 50417 0 0 39053 0 0 50062 0 0 45439 0 0 44680 0 0 49542 0 0 49506 0 0 52207 0 0 239410 0 0 38943 0 0 47625 0 0 39531 0 0 51337 0 0 45795 0 0 45537 0 0 50306 0 0 56685 0 0 51400 0 0 226580 0 0 7 0 0 7 0 0 7 0 0 7 0 0 7 0 0 7 0 0 7 0 0 7 0 0 7 0 0 7 0 0 70623000 70623000 0 0 NaN 3476 1913 19 19 5303 5650 6022;6023;6024;6025 6689;6690;6691;6692;6693;6694;6695;6696;6697 6022 6690 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16517 6022 6690 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16517 6022 6690 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16517 Q9H1H9 636 Q9H1H9 Q9H1H9 Kinesin-like protein KIF13A KIF13A sp|Q9H1H9|KI13A_HUMAN Kinesin-like protein KIF13A OS=Homo sapiens GN=KIF13A PE=1 SV=2 0.999318 34.6715 0.0468886 42.123 30.853 42.123 1 S RLMYERELEQLRQQLSPDRQPQSSGPDRLAY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPXXX QQLS(0.999)PDRQPQSSGPDR QQLS(34.67)PDRQPQS(-34.67)S(-34.67)GPDR 4 3 1.7719 6752.3 0 0 12174 0 0 7063.1 0 0 11284 0 0 8336.7 0 0 9509.1 0 0 8496.9 0 0 10890 0 0 13074 0 0 4150 0 0 6390.6 0 0 11495 0 0 7110.2 0 0 11612 0 0 8391.5 0 0 9635.8 0 0 8766.8 0 0 10995 0 0 12706 0 0 4159.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6248500 6248500 0 0 NaN 3477 1914 636 636 3115 3304 3534 3918 3534 3918 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6684 3534 3918 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6684 3534 3918 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6684 Q9H1H9 1698 Q9H1H9 Q9H1H9 Kinesin-like protein KIF13A KIF13A sp|Q9H1H9|KI13A_HUMAN Kinesin-like protein KIF13A OS=Homo sapiens GN=KIF13A PE=1 SV=2 0.555998 0.978388 1.19744E-07 171.93 148.18 171.93 1 S QSIPEKNSKSLCRTGSCSELDACPSKISQPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX TGS(0.556)CS(0.444)ELDACPSK T(-35.72)GS(0.98)CS(-0.98)ELDACPS(-50.84)K 3 2 0.093321 2937.8 0 0 23788 0 0 2796.4 0 0 23093 0 0 11632 0 0 3915 0 0 9767.2 0 0 12960 0 0 27032 0 0 6523.9 0 0 2779.4 0 0 22468 0 0 2928.6 0 0 23446 0 0 11273 0 0 4905.9 0 0 10505 0 0 12846 0 0 25940 0 0 6443 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11517000 11517000 0 0 NaN 3478 1914 1698 1698 4725 5037 5366 5967 5366 5967 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11379 5366 5967 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11379 5366 5967 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11379 Q9H1K1 14 Q9H1K1 Q9H1K1 Iron-sulfur cluster assembly enzyme ISCU, mitochondrial ISCU sp|Q9H1K1|ISCU_HUMAN Iron-sulfur cluster assembly enzyme ISCU, mitochondrial OS=Homo sapiens GN=ISCU PE=1 SV=2 1 122.939 0.000684983 122.94 29.29 122.94 1 S __MAAAGAFRLRRAASALLLRSPRLPARELS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX AAS(1)ALLLR AAS(122.94)ALLLR 3 2 0.54911 4714.1 0 0 25833 0 0 5177.6 0 0 24917 0 0 18986 0 0 3999.7 0 0 18202 0 0 15990 0 0 27841 0 0 3423.9 0 0 4462.5 0 0 24398 0 0 5354.5 0 0 25304 0 0 18449 0 0 5099.5 0 0 18829 0 0 15678 0 0 27062 0 0 3594.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28653000 28653000 0 0 NaN 3479 1915 14 14 62 66 71 83 71 83 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17520 71 83 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17520 71 83 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17520 Q9H211 318 Q9H211 Q9H211 DNA replication factor Cdt1 CDT1 sp|Q9H211|CDT1_HUMAN DNA replication factor Cdt1 OS=Homo sapiens GN=CDT1 PE=1 SV=3 0.974962 15.9039 2.67385E-05 124.4 107.73 124.4 1 S VEHVKEHHKAFLASLSPAMVVPEDQLTRWHP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPXXX AFLAS(0.025)LS(0.975)PAMVVPEDQLTR AFLAS(-15.9)LS(15.9)PAMVVPEDQLT(-95.3)R 7 3 -0.34242 6551.3 0 0 6794.8 0 0 6509 0 0 7102.7 0 0 9074.1 0 0 6433.5 0 0 8804.6 0 0 9773 0 0 6401.5 0 0 63386 0 0 6199.1 0 0 6420.6 0 0 6587.5 0 0 7263.3 0 0 9050.9 0 0 6639.8 0 0 8909.5 0 0 11584 0 0 6418.3 0 0 59912 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 50150000 50150000 0 0 NaN 3480 1916 318 318 178 186 200 225 200 225 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23727 200 225 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23727 200 225 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23727 Q9H257 460 Q9H257 Q9H257 Caspase recruitment domain-containing protein 9 CARD9 sp|Q9H257|CARD9_HUMAN Caspase recruitment domain-containing protein 9 OS=Homo sapiens GN=CARD9 PE=1 SV=2 1 115.327 0.000169232 115.33 80.572 115.33 1 S EDTQLSDKGCLAGGGSPKQPFAALHQEQVLR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX GCLAGGGS(1)PK GCLAGGGS(115.33)PK 8 3 0.042019 11332 0 0 11475 0 0 12292 0 0 12582 0 0 14342 0 0 12343 0 0 14642 0 0 11697 0 0 13236 0 0 1522.6 0 0 10727 0 0 10846 0 0 12348 0 0 12847 0 0 14436 0 0 12377 0 0 14852 0 0 11804 0 0 13119 0 0 1704.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13899000 13899000 0 0 NaN 3481 1917 460 460 1378 1454 1563 1727 1563 1727 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9722 1563 1727 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9722 1563 1727 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9722 Q9H2G2 372 Q9H2G2 Q9H2G2 STE20-like serine/threonine-protein kinase SLK sp|Q9H2G2|SLK_HUMAN STE20-like serine/threonine-protein kinase OS=Homo sapiens GN=SLK PE=1 SV=1 0.97017 15.1258 0.0148632 61.444 45.016 61.444 1 S ACILESVSEKTERSNSEDKLNSKILNEKPTT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX S(0.03)NS(0.97)EDKLNSK S(-15.13)NS(15.13)EDKLNS(-45.65)K 3 3 -0.70306 38707 0 0 30676 0 0 43142 0 0 26607 0 0 60433 0 0 42638 0 0 61608 0 0 46938 0 0 32278 0 0 10189 0 0 36643 0 0 28955 0 0 43400 0 0 27825 0 0 60296 0 0 42096 0 0 61852 0 0 47223 0 0 33093 0 0 10681 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 62555000 62555000 0 0 NaN 3482 1918 372 372 4052 4320 4609 5119 4609 5119 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9518 4609 5119 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9518 4609 5119 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9518 Q9H2H9 49 Q9H2H9 Q9H2H9 Sodium-coupled neutral amino acid transporter 1 SLC38A1 sp|Q9H2H9|S38A1_HUMAN Sodium-coupled neutral amino acid transporter 1 OS=Homo sapiens GN=SLC38A1 PE=1 SV=1 0.999861 38.5713 0.0519979 47.621 17.071 47.621 1 S VENGQINSKFISDRESRRSLTNSHLEKKKCD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX FISDRES(1)RR FIS(-38.57)DRES(38.57)RR 7 3 -0.15644 26520 0 0 17806 0 0 30634 0 0 15287 0 0 12792 0 0 26127 0 0 12044 0 0 19638 0 0 18081 0 0 2873.3 0 0 25110 0 0 16807 0 0 30390 0 0 16024 0 0 14030 0 0 25628 0 0 12461 0 0 20036 0 0 17584 0 0 3160.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20550000 20550000 0 0 NaN 3483 1919 49 49 1282 1351 1453 1612 1453 1612 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8259 1453 1612 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8259 1453 1612 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8259 Q9H2H9 52 Q9H2H9 Q9H2H9 Sodium-coupled neutral amino acid transporter 1 SLC38A1 sp|Q9H2H9|S38A1_HUMAN Sodium-coupled neutral amino acid transporter 1 OS=Homo sapiens GN=SLC38A1 PE=1 SV=1 0.999797 36.9382 2.42028E-09 186.51 122.56 186.51 1;2 S GQINSKFISDRESRRSLTNSHLEKKKCDEYI X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPXXXXXXX S(1)LTNSHLEK S(36.94)LT(-36.94)NS(-67.75)HLEK 1 3 0.36218 95876 15285 0 47268 18169 0 94289 14262 0 58596 17752 0 36501 11579 0 104700 14286 0 37811 11945 0 60089 14356 0 59512 19755 0 9013.3 8930.8 0 90718 14459 0 44717 17161 0 94330 14388 0 60214 18197 0 40492 11922 0 102350 14492 0 39020 12355 0 62274 14666 0 57800 19161 0 9877.7 8741.6 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 266920000 256290000 10629000 0 NaN 3484 1919 52 52 3473;4012 3689;4277;4278 3935;4565;4566 4370;5073;5074 4565 5073 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11036 4565 5073 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11036 4565 5073 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11036 Q9H2H9 56 Q9H2H9 Q9H2H9 Sodium-coupled neutral amino acid transporter 1 SLC38A1 sp|Q9H2H9|S38A1_HUMAN Sodium-coupled neutral amino acid transporter 1 OS=Homo sapiens GN=SLC38A1 PE=1 SV=1 0.591242 1.56313 0.00718551 97.631 54.248 97.631 2 S SKFISDRESRRSLTNSHLEKKKCDEYIPGTT X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX S(0.995)LT(0.414)NS(0.591)HLEK S(20.35)LT(-1.56)NS(1.56)HLEK 5 2 0.029754 0 15285 0 0 18169 0 0 14262 0 0 17752 0 0 11579 0 0 14286 0 0 11945 0 0 14356 0 0 19755 0 0 8930.8 0 0 14459 0 0 17161 0 0 14388 0 0 18197 0 0 11922 0 0 14492 0 0 12355 0 0 14666 0 0 19161 0 0 8741.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 10629000 0 10629000 0 NaN 3485 1919 56 56 3473;4012 3689;4277;4278 4566 5074 4566 5074 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11894 4566 5074 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11894 4566 5074 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11894 Q9H2K8 442 Q9H2K8 Q9H2K8 Serine/threonine-protein kinase TAO3 TAOK3 sp|Q9H2K8|TAOK3_HUMAN Serine/threonine-protein kinase TAO3 OS=Homo sapiens GN=TAOK3 PE=1 SV=2 0.977542 16.4247 0.00530438 96.331 35.895 96.331 1 S LHYRNRERFATIKSASLVTRQIHEHEQENEL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX S(0.022)AS(0.978)LVTR S(-16.42)AS(16.42)LVT(-37.09)R 3 2 0.42204 35462 0 0 13691 0 0 32024 0 0 14408 0 0 23401 0 0 32423 0 0 24928 0 0 23200 0 0 13390 0 0 2318.5 0 0 33543 0 0 12937 0 0 32341 0 0 15039 0 0 24267 0 0 31584 0 0 24985 0 0 23698 0 0 13701 0 0 2720.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 47206000 47206000 0 0 NaN 3486 1920 442 442 3610 3837 4090 4547 4090 4547 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9406 4090 4547 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9406 4090 4547 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9406 Q9H2P0 709 Q9H2P0 Q9H2P0 Activity-dependent neuroprotector homeobox protein ADNP sp|Q9H2P0|ADNP_HUMAN Activity-dependent neuroprotector homeobox protein OS=Homo sapiens GN=ADNP PE=1 SV=1 0.614575 2.02635 0.0066218 84.375 63.422 84.375 1 S QNGQDKTNAPSRLNQSPSLAPVKRTYEQMEF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX LNQS(0.615)PS(0.385)LAPVKR LNQS(2.03)PS(-2.03)LAPVKR 4 3 0.056352 17589 0 0 15816 0 0 15340 0 0 15970 0 0 18513 0 0 16703 0 0 19241 0 0 18197 0 0 18784 0 0 3405.7 0 0 16635 0 0 14941 0 0 15616 0 0 16400 0 0 18610 0 0 16734 0 0 19538 0 0 18297 0 0 18553 0 0 3628 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28373000 28373000 0 0 NaN 3487 1921 709 709 2484 2623 2817 3144 2817 3144 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13333 2817 3144 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13333 2817 3144 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13333 Q9H2P0 98 Q9H2P0 Q9H2P0 Activity-dependent neuroprotector homeobox protein ADNP sp|Q9H2P0|ADNP_HUMAN Activity-dependent neuroprotector homeobox protein OS=Homo sapiens GN=ADNP PE=1 SV=1 1 114.786 0.000289295 114.79 88.662 114.79 1 S SKFFSAYKSHFRNVHSEDFENRILLNCPYCT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX NVHS(1)EDFENR NVHS(114.79)EDFENR 4 2 0.00062245 13831 0 0 15129 0 0 13638 0 0 17244 0 0 18652 0 0 14374 0 0 17537 0 0 15619 0 0 16120 0 0 4346.7 0 0 13087 0 0 14304 0 0 13804 0 0 17530 0 0 18615 0 0 14559 0 0 17866 0 0 15749 0 0 15966 0 0 4454.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10674000 10674000 0 0 NaN 3488 1921 98 98 2956 3135 3357 3722 3357 3722 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7623 3357 3722 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7623 3357 3722 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7623 Q9H2S9 491 Q9H2S9 Q9H2S9 Zinc finger protein Eos IKZF4 sp|Q9H2S9|IKZF4_HUMAN Zinc finger protein Eos OS=Homo sapiens GN=IKZF4 PE=1 SV=2 0.999944 42.5057 0.0142166 64.654 35.957 64.654 1 S GPPPQPPPTIVVGRHSPAYAKEDPKPQEGLL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPXXXXXXXXXX HS(1)PAYAK HS(42.51)PAY(-42.51)AK 2 3 -0.2684 18666 0 0 31571 0 0 18012 0 0 29222 0 0 18313 0 0 17456 0 0 19672 0 0 22313 0 0 32039 0 0 1891.5 0 0 17660 0 0 29811 0 0 18180 0 0 29959 0 0 18597 0 0 18087 0 0 20298 0 0 22250 0 0 31088 0 0 2297.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7687900 7687900 0 0 NaN 3489 1922 491 491 1750 1847 1993 2221 1993 2221 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7088 1993 2221 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7088 1993 2221 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7088 Q9H2U1 2 Q9H2U1 Q9H2U1 ATP-dependent RNA helicase DHX36 DHX36 sp|Q9H2U1|DHX36_HUMAN ATP-dependent RNA helicase DHX36 OS=Homo sapiens GN=DHX36 PE=1 SV=2 0.642531 2.54676 8.32925E-07 111.01 101.72 111.01 1 S ______________MSYDYHQNWGRDGGPRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPXXXXXX S(0.643)Y(0.357)DYHQNWGR S(2.55)Y(-2.55)DY(-45.76)HQNWGR 1 2 -0.091857 11253 0 0 11067 0 0 11198 0 0 11504 0 0 17277 0 0 12271 0 0 17553 0 0 13685 0 0 12053 0 0 16168 0 0 10648 0 0 10457 0 0 11354 0 0 11797 0 0 17172 0 0 12314 0 0 17703 0 0 14160 0 0 12126 0 0 15541 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12850000 12850000 0 0 NaN 3490 1923 2 2 4592 4897 5217 5793 5217 5793 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11676 5217 5793 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11676 5217 5793 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11676 Q9H2V7 518 Q9H2V7 Q9H2V7 Protein spinster homolog 1 SPNS1 sp|Q9H2V7|SPNS1_HUMAN Protein spinster homolog 1 OS=Homo sapiens GN=SPNS1 PE=1 SV=1 0.597819 1.78455 0.0297184 60.246 42.92 60.246 1 S AGSTDDRIVVPQRGRSTRVPVASVLI_____ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX GRS(0.598)T(0.396)RVPVAS(0.006)VLI GRS(1.78)T(-1.78)RVPVAS(-20.13)VLI 3 3 -0.59342 3984.1 0 0 4526.4 0 0 4347.3 0 0 4242.4 0 0 7408.5 0 0 4391.4 0 0 5478.9 0 0 4605.2 0 0 4449.2 0 0 2898.7 0 0 3771.3 0 0 4274.3 0 0 4390.4 0 0 4375.6 0 0 7309.1 0 0 4403.2 0 0 5641.5 0 0 4698.4 0 0 4433.7 0 0 2836.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5393800 5393800 0 0 NaN 3491 1924 518 518 1594 1680 1816 2017 1816 2017 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18332 1816 2017 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18332 1816 2017 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18332 Q9H2Y7 1279 Q9H2Y7 Q9H2Y7 Zinc finger protein 106 ZNF106 sp|Q9H2Y7|ZN106_HUMAN Zinc finger protein 106 OS=Homo sapiens GN=ZNF106 PE=1 SV=1 0.98367 18.2587 1.06045E-22 258.86 207.64 258.86 1 S LKFSVEQRNTRNRENSPSSQSAGLSSINKEG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPXX NRENS(0.984)PS(0.015)S(0.002)QSAGLSSINK NRENS(18.26)PS(-18.26)S(-27.78)QS(-79.62)AGLS(-161.36)S(-181.28)INK 5 3 0.94599 68866 0 0 57728 0 0 72492 0 0 58720 0 0 43169 0 0 79848 0 0 45756 0 0 60850 0 0 67763 0 0 62619 0 0 65178 0 0 54540 0 0 72433 0 0 60570 0 0 45597 0 0 78972 0 0 47054 0 0 63660 0 0 65928 0 0 60372 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 50049000 50049000 0 0 NaN 3492 1925 1279 1279 2902 3076 3294 3651;3652;3653 3294 3651 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10902 3294 3651 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10902 3294 3651 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10902 Q9H2Y7 861 Q9H2Y7 Q9H2Y7 Zinc finger protein 106 ZNF106 sp|Q9H2Y7|ZN106_HUMAN Zinc finger protein 106 OS=Homo sapiens GN=ZNF106 PE=1 SV=1 0.990883 24.0584 1.08015E-06 147.42 103.12 100.31 1 S VSISSSPGLARKRSLSESSVIMDRAPSVYSF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX S(0.004)LS(0.991)ES(0.003)S(0.003)VIMDR S(-24.06)LS(24.06)ES(-25.79)S(-25.79)VIMDR 3 2 -0.50263 45027 0 0 41567 0 0 41505 0 0 38892 0 0 29104 0 0 44899 0 0 30693 0 0 37269 0 0 41901 0 0 39529 0 0 42594 0 0 39252 0 0 41847 0 0 40193 0 0 30300 0 0 44715 0 0 31473 0 0 38871 0 0 40869 0 0 38084 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 54244000 54244000 0 0 NaN 3493 1925 861 861 3981 4243;4244 4528;4529 5034;5035 4528 5034 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13627 4529 5035 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16132 4529 5035 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16132 Q9H307 66 Q9H307 Q9H307 Pinin PNN sp|Q9H307|PININ_HUMAN Pinin OS=Homo sapiens GN=PNN PE=1 SV=4 0.995253 23.2148 5.53208E-07 145.29 127.13 142.72 1 S GGGRGRGSLLLRRGFSDSGGGPPAKQRDLEG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX RGFS(0.995)DS(0.005)GGGPPAK RGFS(23.21)DS(-23.21)GGGPPAK 4 3 -0.063696 82589 0 0 61987 0 0 79834 0 0 64004 0 0 123470 0 0 82564 0 0 129450 0 0 87486 0 0 62120 0 0 15407 0 0 78140 0 0 58568 0 0 81092 0 0 65892 0 0 122740 0 0 82020 0 0 129640 0 0 88028 0 0 64149 0 0 16532 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 249090000 249090000 0 0 NaN 3494 1926 66 66 1423;3243 1500;3440 1609;3676 1779;4079 3676 4079 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9762 1609 1779 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11878 1609 1779 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11878 Q9H307 690 Q9H307 Q9H307 Pinin PNN sp|Q9H307|PININ_HUMAN Pinin OS=Homo sapiens GN=PNN PE=1 SV=4 0.999171 30.8128 0.000228303 126.09 80.96 126.09 1 S TKGSKDKNSRSDRKRSISESSRSGKRSSRSE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX KRS(0.999)IS(0.001)ESSR KRS(30.81)IS(-30.81)ES(-71.89)S(-96.54)R 3 3 0.31657 36071 0 0 20573 0 0 37917 0 0 18497 0 0 64867 0 0 34843 0 0 68130 0 0 45701 0 0 19728 0 0 4101.9 0 0 34140 0 0 19423 0 0 38411 0 0 19381 0 0 64236 0 0 34339 0 0 67868 0 0 45544 0 0 21519 0 0 4920.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 105910000 105910000 0 0 NaN 3495 1926 690 690 2201 2327 2508 2799 2508 2799 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5866 2508 2799 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5866 2508 2799 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5866 Q9H307 381 Q9H307 Q9H307 Pinin PNN sp|Q9H307|PININ_HUMAN Pinin OS=Homo sapiens GN=PNN PE=1 SV=4 1 166.787 4.02492E-08 166.79 144.35 166.79 1 S MEEETEVRESEKQQDSQPEEVMDVLEMVENV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP QQDS(1)QPEEVMDVLEMVENVK QQDS(166.79)QPEEVMDVLEMVENVK 4 3 -0.33701 9474.8 0 0 12411 0 0 10004 0 0 11151 0 0 12977 0 0 10726 0 0 15373 0 0 16926 0 0 13762 0 0 183880 0 0 8967.6 0 0 11717 0 0 10084 0 0 11519 0 0 13026 0 0 11194 0 0 15490 0 0 22279 0 0 13648 0 0 173540 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 67240000 67240000 0 0 NaN 3496 1926 381 381 3112 3300;3301 3530;3531 3913;3914 3531 3914 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24212 3531 3914 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24212 3531 3914 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24212 Q9H307 441 Q9H307 Q9H307 Pinin PNN sp|Q9H307|PININ_HUMAN Pinin OS=Homo sapiens GN=PNN PE=1 SV=4 0.508365 0.145348 2.99659E-07 161.22 142.81 161.22 1 S EPEMEFEIEPDKECKSLSPGKENVSALDMEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.508)LS(0.492)PGKENVSALDMEK S(0.15)LS(-0.15)PGKENVS(-55.72)ALDMEK 1 4 0.031976 11964 0 0 11635 0 0 13829 0 0 12490 0 0 13337 0 0 12810 0 0 15007 0 0 13536 0 0 14960 0 0 5228.7 0 0 11328 0 0 10996 0 0 13815 0 0 12777 0 0 13588 0 0 12845 0 0 15194 0 0 13707 0 0 14763 0 0 5236.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 56784000 56784000 0 0 NaN 3497 1926 441 441 3992 4256;4257 4544 5052 4544 5052 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16984 4544 5052 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16984 4544 5052 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16984 Q9H307 443 Q9H307 Q9H307 Pinin PNN sp|Q9H307|PININ_HUMAN Pinin OS=Homo sapiens GN=PNN PE=1 SV=4 0.989727 19.8438 2.60935E-10 178.22 145.85 178.22 1 S EMEFEIEPDKECKSLSPGKENVSALDMEKES X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX S(0.01)LS(0.99)PGKENVSALDMEK S(-19.84)LS(19.84)PGKENVS(-48.71)ALDMEK 3 3 0.11869 51766 0 0 56651 0 0 59257 0 0 54217 0 0 51093 0 0 54382 0 0 55177 0 0 59943 0 0 60795 0 0 10431 0 0 49012 0 0 53502 0 0 59145 0 0 55820 0 0 52395 0 0 54591 0 0 56123 0 0 60226 0 0 59748 0 0 11209 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 96671000 96671000 0 0 NaN 3498 1926 443 443 3992 4256;4257 4543 5051 4543 5051 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15163 4543 5051 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15163 4543 5051 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15163 Q9H322;Q9NNX9;Q9H320;Q9H321 27;27;27;27 Q9H322 Q9H322 Variable charge X-linked protein 2;Variable charge X-linked protein 3;Variable charge X-linked protein 1;Variable charge X-linked protein 3B VCX2;VCX3A;VCX;VCX3B sp|Q9H322|VCX2_HUMAN Variable charge X-linked protein 2 OS=Homo sapiens GN=VCX2 PE=2 SV=3;sp|Q9NNX9|VCX3_HUMAN Variable charge X-linked protein 3 OS=Homo sapiens GN=VCX3A PE=2 SV=1;sp|Q9H320|VCX1_HUMAN Variable charge X-linked protein 1 OS=Homo sapiens GN= 0.955806 13.5396 0.0055929 91.28 69.132 91.28 1 S AKATEAGKRKSSSQPSPSDPKKKTTKVAKKG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX SSS(0.002)QPS(0.956)PS(0.042)DPK S(-44.92)S(-39.55)S(-27.37)QPS(13.54)PS(-13.54)DPK 6 2 0.57113 4838.9 0 0 20847 0 0 4925.2 0 0 21025 0 0 5077.9 0 0 6147.3 0 0 4519.8 0 0 9540 0 0 24691 0 0 4023.1 0 0 4579.2 0 0 19695 0 0 4955.3 0 0 21338 0 0 5155.2 0 0 6875.9 0 0 5180 0 0 9559.1 0 0 23507 0 0 4009 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16338000 16338000 0 0 NaN 3499 1927 27 27 4461 4752 5057 5612 5057 5612 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7383 5057 5612 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7383 5057 5612 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7383 Q9H330 332 Q9H330 Q9H330 Transmembrane protein 245 TMEM245 sp|Q9H330|TM245_HUMAN Transmembrane protein 245 OS=Homo sapiens GN=TMEM245 PE=1 SV=2 0.82854 8.73947 1.30189E-17 215.15 181.86 215.15 1 S LSTSPSPSSPSPTSPSPTLGRRRPEIGTFLR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX GESAPTLSTSPSPSSPSPT(0.003)S(0.058)PS(0.829)PT(0.111)LGR GES(-151.49)APT(-134.59)LS(-121.65)T(-109.54)S(-98.63)PS(-76.26)PS(-51.42)S(-53.82)PS(-36.43)PT(-25)S(-11.56)PS(8.74)PT(-8.74)LGR 22 3 -0.56864 3544.7 0 0 4971.4 0 0 3488.1 0 0 4707.7 0 0 6209.9 0 0 3860.7 0 0 8017.9 0 0 6366.3 0 0 4665.9 0 0 11876 0 0 3354 0 0 4694.8 0 0 3552.3 0 0 4836.2 0 0 6163.6 0 0 3961.4 0 0 7982.9 0 0 6646.6 0 0 4746 0 0 11330 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28160000 28160000 0 0 NaN 3500 1928 332 332 1410 1487 1596 1766 1596 1766 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13954 1596 1766 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13954 1596 1766 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13954 Q9H3H1 455 Q9H3H1 Q9H3H1 tRNA dimethylallyltransferase, mitochondrial TRIT1 sp|Q9H3H1|MOD5_HUMAN tRNA dimethylallyltransferase, mitochondrial OS=Homo sapiens GN=TRIT1 PE=1 SV=1 1 59.5852 0.0192445 59.585 33.461 59.585 1 S QSVSPDHNKEPKEKGSPGQNDQELKCSV___ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX EKGS(1)PGQNDQELK EKGS(59.59)PGQNDQELK 4 3 1.294 11926 0 0 27610 0 0 11379 0 0 27776 0 0 15544 0 0 12589 0 0 15927 0 0 18311 0 0 28752 0 0 5876.6 0 0 11283 0 0 26083 0 0 11541 0 0 28266 0 0 15546 0 0 13379 0 0 16545 0 0 18323 0 0 27826 0 0 5957.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15519000 15519000 0 0 NaN 3501 1929 455 455 1015 1071 1158 1276 1158 1276 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9750 1158 1276 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9750 1158 1276 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9750 Q9H3N1 247 Q9H3N1 Q9H3N1 Thioredoxin-related transmembrane protein 1 TMX1 sp|Q9H3N1|TMX1_HUMAN Thioredoxin-related transmembrane protein 1 OS=Homo sapiens GN=TMX1 PE=1 SV=1 1 154.36 4.79094E-42 345.29 304.86 345.29 1 S LKKVEEEQEADEEDVSEEEAESKEGTNKDFP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPPPXXXXXXXX KVEEEQEADEEDVS(1)EEEAESK KVEEEQEADEEDVS(154.36)EEEAES(-154.36)K 14 3 0.082443 78637 0 0 45265 0 0 78163 0 0 46078 0 0 56282 0 0 72319 0 0 58645 0 0 63950 0 0 47414 0 0 29157 0 0 74409 0 0 42765 0 0 78470 0 0 47684 0 0 58430 0 0 71267 0 0 59274 0 0 65349 0 0 47260 0 0 28935 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 333940000 333940000 0 0 NaN 3502 1931 247 247 2260;5087 2388;5422 2570;5774 2868;6417;6418 2570 2868 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11813 2570 2868 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11813 2570 2868 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11813 Q9H3N1 270 Q9H3N1 Q9H3N1 Thioredoxin-related transmembrane protein 1 TMX1 sp|Q9H3N1|TMX1_HUMAN Thioredoxin-related transmembrane protein 1 OS=Homo sapiens GN=TMX1 PE=1 SV=1 0.999999 58.6132 6.40295E-10 180.61 118.66 122.44 1 S EGTNKDFPQNAIRQRSLGPSLATDKS_____ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX QRS(1)LGPSLATDK QRS(58.61)LGPS(-58.61)LAT(-98.76)DK 3 3 0.48861 90675 0 0 42644 0 0 90931 0 0 42134 0 0 49710 0 0 89739 0 0 52225 0 0 64654 0 0 42154 0 0 20692 0 0 85803 0 0 40281 0 0 91047 0 0 44058 0 0 52906 0 0 87550 0 0 52764 0 0 66448 0 0 42021 0 0 20980 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 99560000 99560000 0 0 NaN 3503 1931 270 270 3126;3127;3939 3317;3318;4198 3547;3548;4480 3931;3932;4979 3547 3931 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12279 4480 4979 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15011 4480 4979 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15011 Q9H3P2 363 Q9H3P2 Q9H3P2 Negative elongation factor A NELFA sp|Q9H3P2|NELFA_HUMAN Negative elongation factor A OS=Homo sapiens GN=NELFA PE=1 SV=3 0.875614 8.52968 3.68967E-05 122.73 117.41 122.73 1 S SSREASRPPEEPSAPSPTLPAQFKQRAPMYN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPXXXXXXX EASRPPEEPS(0.002)APS(0.876)PT(0.123)LPAQFK EAS(-45.16)RPPEEPS(-27.61)APS(8.53)PT(-8.53)LPAQFK 13 4 -0.094672 8933.7 0 0 8718.5 0 0 10085 0 0 9296.3 0 0 7051.5 0 0 9948 0 0 9178.5 0 0 9476.4 0 0 9226.5 0 0 6488.6 0 0 8457.9 0 0 8239.3 0 0 10056 0 0 9520.4 0 0 7365.2 0 0 9948.6 0 0 9242.1 0 0 9719.3 0 0 9101.8 0 0 6329.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 32459000 32459000 0 0 NaN 3504 1932 363 363 886 939 1017 1124 1017 1124 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16170 1017 1124 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16170 1017 1124 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16170 Q9H410 58 Q9H410 Q9H410 Kinetochore-associated protein DSN1 homolog DSN1 sp|Q9H410|DSN1_HUMAN Kinetochore-associated protein DSN1 homolog OS=Homo sapiens GN=DSN1 PE=1 SV=2 0.865117 8.07119 1.85224E-05 141.88 112.14 141.88 1 S EMNQGVSEERIHLGSSPKKGGNCDLSHQERL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPXXXXXXXXXXXXX IHLGS(0.135)S(0.865)PK IHLGS(-8.07)S(8.07)PK 6 3 0.19895 19453 0 0 18439 0 0 18339 0 0 18161 0 0 12453 0 0 21777 0 0 15113 0 0 21527 0 0 18439 0 0 1176.4 0 0 18404 0 0 17417 0 0 18464 0 0 18722 0 0 13025 0 0 21666 0 0 15347 0 0 21638 0 0 18053 0 0 1605.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 79114000 79114000 0 0 NaN 3505 1934 58 58 1849 1952 2109 2363 2109 2363 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12182 2109 2363 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12182 2109 2363 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12182 Q9H4A3 185 Q9H4A3 Q9H4A3 Serine/threonine-protein kinase WNK1 WNK1 sp|Q9H4A3|WNK1_HUMAN Serine/threonine-protein kinase WNK1 OS=Homo sapiens GN=WNK1 PE=1 SV=2 0.896203 9.36855 3.78909E-08 174.26 145.9 174.26 1 S SLVGSKEEPPPARSGSGGGSAKEPQEERSQQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX S(0.104)GS(0.896)GGGSAKEPQEER S(-9.37)GS(9.37)GGGS(-37.72)AKEPQEER 3 3 0.14634 45207 0 0 16016 0 0 48995 0 0 17112 0 0 24297 0 0 47226 0 0 24170 0 0 32944 0 0 18261 0 0 8533.7 0 0 42792 0 0 15136 0 0 48815 0 0 17987 0 0 26107 0 0 45830 0 0 24447 0 0 33856 0 0 18269 0 0 8798 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 116230000 116230000 0 0 NaN 3506 1936 185 185 3806 4054 4325 4805 4325 4805 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5971 4325 4805 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5971 4325 4805 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5971 Q9H4A3 2372 Q9H4A3 Q9H4A3 Serine/threonine-protein kinase WNK1 WNK1 sp|Q9H4A3|WNK1_HUMAN Serine/threonine-protein kinase WNK1 OS=Homo sapiens GN=WNK1 PE=1 SV=2 0.955071 13.2787 0.000257648 106.03 71.943 106.03 1 S ASLQNFNISNLQKSISNPPGSNLRTT_____ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX S(0.045)IS(0.955)NPPGSNLR S(-13.28)IS(13.28)NPPGS(-44.04)NLR 3 2 -0.096607 33506 0 0 21940 0 0 31991 0 0 21087 0 0 16192 0 0 33585 0 0 17973 0 0 21686 0 0 22391 0 0 11703 0 0 31699 0 0 20721 0 0 32110 0 0 21905 0 0 17394 0 0 32979 0 0 18330 0 0 22567 0 0 21906 0 0 11522 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22445000 22445000 0 0 NaN 3507 1936 2372 2372 3868 4121 4397 4891 4397 4891 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11236 4397 4891 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11236 4397 4891 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11236 Q9H4A3 2140 Q9H4A3 Q9H4A3 Serine/threonine-protein kinase WNK1 WNK1 sp|Q9H4A3|WNK1_HUMAN Serine/threonine-protein kinase WNK1 OS=Homo sapiens GN=WNK1 PE=1 SV=2 0.94314 13.098 0.009044 89.913 50.064 89.913 1 S RRPTKSKGSKSSRSSSLGNKSPQLSGNLSGQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX S(0.011)S(0.046)S(0.943)LGNK S(-19.47)S(-13.1)S(13.1)LGNK 3 2 -0.26766 117000 0 0 43885 0 0 122440 0 0 38178 0 0 72178 0 0 122080 0 0 70643 0 0 77746 0 0 42804 0 0 5783.5 0 0 110730 0 0 41424 0 0 122360 0 0 40897 0 0 76167 0 0 118080 0 0 71219 0 0 79878 0 0 43416 0 0 7245.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 77029000 77029000 0 0 NaN 3508 1936 2140 2140 4428 4719 5023 5572 5023 5572 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8484 5023 5572 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8484 5023 5572 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8484 Q9H4E7 597 Q9H4E7 Q9H4E7 Differentially expressed in FDCP 6 homolog DEF6 sp|Q9H4E7|DEFI6_HUMAN Differentially expressed in FDCP 6 homolog OS=Homo sapiens GN=DEF6 PE=1 SV=1 0.839444 7.18433 3.32528E-10 194.3 147.66 194.3 1 S LKRLTRWGSQGNRTPSPNSNEQQKSLNGGDE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX T(0.161)PS(0.839)PNSNEQQK T(-7.18)PS(7.18)PNS(-45.28)NEQQK 3 2 0.12384 21399 0 0 8175.1 0 0 20400 0 0 8202.6 0 0 12751 0 0 20519 0 0 13532 0 0 12595 0 0 7447.7 0 0 1592.7 0 0 20246 0 0 7722.9 0 0 20507 0 0 8618.3 0 0 13397 0 0 19921 0 0 13571 0 0 12989 0 0 7606.8 0 0 1791.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17954000 17954000 0 0 NaN 3509 1937 597 597 4853 5178 5517 6135 5517 6135 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7113 5517 6135 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7113 5517 6135 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7113 Q9H4L4 169 Q9H4L4 Q9H4L4 Sentrin-specific protease 3 SENP3 sp|Q9H4L4|SENP3_HUMAN Sentrin-specific protease 3 OS=Homo sapiens GN=SENP3 PE=1 SV=2 1 90.4809 5.61569E-12 208.99 177.48 208.99 1 S HRGRRRGLAHPKNHLSPQQGGATPQVPSPCC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP NHLS(1)PQQGGATPQVPSPCCR NHLS(90.48)PQQGGAT(-90.48)PQVPS(-168.02)PCCR 4 3 -1.3711 11937 0 0 15976 0 0 15383 0 0 15193 0 0 32175 0 0 15516 0 0 34317 0 0 23384 0 0 18083 0 0 22661 0 0 11309 0 0 15088 0 0 15501 0 0 15652 0 0 31675 0 0 15679 0 0 34385 0 0 23834 0 0 18531 0 0 21880 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 71959000 71959000 0 0 NaN 3510 1938 169 169 2821 2991 3204 3557 3204 3557 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10741 3204 3557 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10741 3204 3557 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10741 Q9H4L5 186 Q9H4L5 Q9H4L5 Oxysterol-binding protein-related protein 3 OSBPL3 sp|Q9H4L5|OSBL3_HUMAN Oxysterol-binding protein-related protein 3 OS=Homo sapiens GN=OSBPL3 PE=1 SV=1 0.923383 10.8106 0.00496855 91.265 22.531 91.265 1 S SSSGVFDSISSRKRSSISKQNLFQTGSNVSF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX KRS(0.077)S(0.923)ISK KRS(-10.81)S(10.81)IS(-60.7)K 4 4 0.4696 8045.1 0 0 19322 0 0 9899.8 0 0 17570 0 0 10829 0 0 10042 0 0 10603 0 0 13132 0 0 20802 0 0 1768 0 0 7619.6 0 0 18242 0 0 9872.9 0 0 18026 0 0 10941 0 0 10444 0 0 11083 0 0 13106 0 0 20093 0 0 1968.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7117200 7117200 0 0 NaN 3511 1939 186 186 2204 2330 2511 2803 2511 2803 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7051 2511 2803 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7051 2511 2803 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7051 Q9H4L5 304 Q9H4L5 Q9H4L5 Oxysterol-binding protein-related protein 3 OSBPL3 sp|Q9H4L5|OSBL3_HUMAN Oxysterol-binding protein-related protein 3 OS=Homo sapiens GN=OSBPL3 PE=1 SV=1 0.811927 6.35191 9.46147E-11 184.29 166.13 184.29 1 S LQVPKPFSGPVRLHSSNPNLSTLDFGEEKNY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPXX LHS(0.188)S(0.812)NPNLSTLDFGEEK LHS(-6.35)S(6.35)NPNLS(-89.25)T(-110.18)LDFGEEK 4 3 -0.92454 6848.3 0 0 17214 0 0 8086.5 0 0 18444 0 0 6234.2 0 0 7979.7 0 0 7379.3 0 0 11678 0 0 19713 0 0 10712 0 0 6484.9 0 0 16268 0 0 8051 0 0 18695 0 0 6463.7 0 0 8532.1 0 0 7794.3 0 0 11893 0 0 18928 0 0 10357 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 156060000 156060000 0 0 NaN 3512 1939 304 304 2399 2536 2729 3049 2729 3049 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18166 2729 3049 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18166 2729 3049 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18166 Q9H4L5 374 Q9H4L5 Q9H4L5 Oxysterol-binding protein-related protein 3 OSBPL3 sp|Q9H4L5|OSBL3_HUMAN Oxysterol-binding protein-related protein 3 OS=Homo sapiens GN=OSBPL3 PE=1 SV=1 0.824049 8.4679 0.0150078 63.302 36.867 63.302 1 S EKLKQLMEQDASSSPSAQVIGLKNALSSALA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPXXXXXXXX QLMEQDAS(0.011)S(0.048)S(0.117)PS(0.824)AQVIGLK QLMEQDAS(-18.83)S(-12.36)S(-8.47)PS(8.47)AQVIGLK 12 3 1.5083 4337.2 0 0 12895 0 0 5586.2 0 0 13918 0 0 7093.9 0 0 6979.8 0 0 7864 0 0 9677.6 0 0 15388 0 0 14024 0 0 4108.8 0 0 12188 0 0 5573.1 0 0 14117 0 0 7127.9 0 0 7366.1 0 0 8174 0 0 10025 0 0 14864 0 0 13429 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14257000 14257000 0 0 NaN 3513 1939 374 374 3068 3254 3482 3858 3482 3858 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19287 3482 3858 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19287 3482 3858 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19287 Q9H4L5 251 Q9H4L5 Q9H4L5 Oxysterol-binding protein-related protein 3 OSBPL3 sp|Q9H4L5|OSBL3_HUMAN Oxysterol-binding protein-related protein 3 OS=Homo sapiens GN=OSBPL3 PE=1 SV=1 0.999923 41.1545 9.73053E-17 243.35 220.92 243.35 1 S MSQLLQSMDVLHRTYSAPAINAIQGGSFESP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP TYS(1)APAINAIQGGSFESPKK T(-41.15)Y(-105.31)S(41.15)APAINAIQGGS(-134.71)FES(-161.17)PKK 3 3 0.66041 8826.6 0 0 43538 0 0 8577.6 0 0 39747 0 0 15941 0 0 9155 0 0 17399 0 0 20807 0 0 45628 0 0 31245 0 0 8351.3 0 0 41108 0 0 8744.4 0 0 40551 0 0 15790 0 0 10747 0 0 18413 0 0 21361 0 0 43824 0 0 29903 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 36230000 36230000 0 0 NaN 3514 1939 251 251 5032;5033 5366;5367 5718;5719 6357;6358 5719 6358 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18163 5719 6358 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18163 5719 6358 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18163 Q9H4L7 79 Q9H4L7 Q9H4L7 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 SMARCAD1 sp|Q9H4L7|SMRCD_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 OS=Homo sapiens GN=SMARCAD1 PE=1 SV=2 0.812732 6.37484 0.000383534 126.12 101.42 126.12 1 S EDSSVPETPDNERKASISYFKNQRGIQYIDL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX KAS(0.813)IS(0.187)YFK KAS(6.37)IS(-6.37)Y(-64.44)FK 3 3 1.7842 30685 0 0 12476 0 0 28000 0 0 11722 0 0 35089 0 0 28656 0 0 37777 0 0 29438 0 0 13058 0 0 2926.8 0 0 29026 0 0 11782 0 0 28440 0 0 12354 0 0 35205 0 0 27983 0 0 37648 0 0 29586 0 0 13933 0 0 3437.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 44456000 44456000 0 0 NaN 3515 1940 79 79 2013 2130 2295 2562 2295 2562 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16289 2295 2562 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16289 2295 2562 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16289 Q9H4Z3 144 Q9H4Z3 Q9H4Z3 Phosphorylated CTD-interacting factor 1 PCIF1 sp|Q9H4Z3|PCIF1_HUMAN Phosphorylated CTD-interacting factor 1 OS=Homo sapiens GN=PCIF1 PE=1 SV=1 0.78235 5.64814 3.91775E-05 123.21 108.28 123.21 1 S KIEIPVTPTGQSVPSSPSIPGTPTLKMWGTS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPPPPPPPPXXXXX IEIPVTPTGQSVPS(0.213)S(0.782)PS(0.005)IPGTPTLK IEIPVT(-70.14)PT(-62.87)GQS(-50.08)VPS(-5.65)S(5.65)PS(-22.37)IPGT(-54.98)PT(-59.79)LK 15 3 0.78238 3791.9 0 0 4421.8 0 0 4560.6 0 0 4252.8 0 0 4851.4 0 0 4688.4 0 0 5398.6 0 0 4142.6 0 0 4698 0 0 26308 0 0 3591 0 0 4176.1 0 0 4552.7 0 0 4383.9 0 0 4913.1 0 0 4722.7 0 0 5449.9 0 0 4969.2 0 0 4665.3 0 0 24868 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 39709000 39709000 0 0 NaN 3516 1941 144 144 1818 1919 2073 2323 2073 2323 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22805 2073 2323 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22805 2073 2323 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22805 Q9H501 153 Q9H501 Q9H501 ESF1 homolog ESF1 sp|Q9H501|ESF1_HUMAN ESF1 homolog OS=Homo sapiens GN=ESF1 PE=1 SV=1 0.999906 40.2558 0.00631889 92.112 23.576 85.536 1 S KKMKTSCKFKIDSNISPKKDSKEFTQKNKKE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX FKIDSNIS(1)PK FKIDS(-40.26)NIS(40.26)PK 8 4 0.41661 84670 0 0 73393 0 0 87462 0 0 72957 0 0 47667 0 0 81609 0 0 54032 0 0 67024 0 0 77593 0 0 28973 0 0 80130 0 0 69330 0 0 87433 0 0 75076 0 0 50835 0 0 81286 0 0 55339 0 0 68668 0 0 75561 0 0 28833 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 146820000 146820000 0 0 NaN 3517 1942 153 153 1285;1798 1354;1898 1456;2045 1615;2281 1456 1615 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16580 2045 2281 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12842 1456 1615 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16580 Q9H501 735 Q9H501 Q9H501 ESF1 homolog ESF1 sp|Q9H501|ESF1_HUMAN ESF1 homolog OS=Homo sapiens GN=ESF1 PE=1 SV=1 1 70.6282 0.00955808 70.628 48.997 70.628 1 S KKHFNYNKIVEHQNLSKKKKKQLMKKKELIE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPXXXXXXXXXXXXXX IVEHQNLS(1)K IVEHQNLS(70.63)K 8 3 -0.57416 20746 0 0 19117 0 0 18690 0 0 18377 0 0 15885 0 0 20082 0 0 16447 0 0 17303 0 0 18669 0 0 3525.6 0 0 19623 0 0 18055 0 0 18905 0 0 18941 0 0 16296 0 0 20025 0 0 16776 0 0 17570 0 0 18326 0 0 3720.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19906000 19906000 0 0 NaN 3518 1942 735 735 1975 2088 2252 2514 2252 2514 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11044 2252 2514 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11044 2252 2514 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11044 Q9H501 198 Q9H501 Q9H501 ESF1 homolog ESF1 sp|Q9H501|ESF1_HUMAN ESF1 homolog OS=Homo sapiens GN=ESF1 PE=1 SV=1 1 78.4807 1.8778E-10 178.72 153.8 178.72 1 S EKQRTLDSGTSEIVKSPRIECSKTRREMQSV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPXXXXXXXXXXXXX TLDSGTSEIVKS(1)PR T(-115.41)LDS(-106.81)GT(-90.12)S(-78.48)EIVKS(78.48)PR 12 3 0.54162 30664 0 0 32896 0 0 30665 0 0 32949 0 0 19167 0 0 31789 0 0 19187 0 0 28371 0 0 36514 0 0 3912.6 0 0 29016 0 0 31076 0 0 30737 0 0 33809 0 0 20146 0 0 31880 0 0 20004 0 0 28708 0 0 35293 0 0 4340.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 129090000 129090000 0 0 NaN 3519 1942 198 198 4764 5081 5414 6020 5414 6020 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12691 5414 6020 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12691 5414 6020 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12691 Q9H5H4 83 Q9H5H4 Q9H5H4 Zinc finger protein 768 ZNF768 sp|Q9H5H4|ZN768_HUMAN Zinc finger protein 768 OS=Homo sapiens GN=ZNF768 PE=1 SV=2 1 68.1883 2.35639E-09 175.98 124 175.98 1 S QSPEFEPQSPRFEPESPGFESRSPGLVPPSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX FEPES(1)PGFESR FEPES(68.19)PGFES(-68.19)R 5 2 -0.46646 14877 0 0 29177 0 0 13636 0 0 29254 0 0 27194 0 0 15094 0 0 29142 0 0 24454 0 0 33063 0 0 14731 0 0 14073 0 0 27563 0 0 13972 0 0 29805 0 0 26827 0 0 15906 0 0 29678 0 0 24610 0 0 32457 0 0 14437 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 76277000 76277000 0 0 NaN 3520 1943 83 83 1255 1320 1421 1574 1421 1574 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15142 1421 1574 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15142 1421 1574 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15142 Q9H5H4 90 Q9H5H4 Q9H5H4 Zinc finger protein 768 ZNF768 sp|Q9H5H4|ZN768_HUMAN Zinc finger protein 768 OS=Homo sapiens GN=ZNF768 PE=1 SV=2 1 102.085 0.000871068 102.08 71.014 102.08 2 S QSPRFEPESPGFESRSPGLVPPSPEFAPRSP X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPXX S(1)PGLVPPS(1)PEFAPR S(102.08)PGLVPPS(102.08)PEFAPR 1 2 -0.99996 0 5415.6 0 0 8099.2 0 0 5243.7 0 0 7613 0 0 9535 0 0 5509.2 0 0 9406.3 0 0 8339.5 0 0 7536.7 0 0 39470 0 0 5123.9 0 0 7648.2 0 0 5342.3 0 0 7812.6 0 0 9419.1 0 0 5725.9 0 0 9529.7 0 0 9444.7 0 0 7515.8 0 0 37359 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 8049500 0 8049500 0 NaN 3521 1943 90 90 4104 4376 4666 5181 4666 5181 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18371 4666 5181 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18371 4666 5181 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18371 Q9H5H4 97 Q9H5H4 Q9H5H4 Zinc finger protein 768 ZNF768 sp|Q9H5H4|ZN768_HUMAN Zinc finger protein 768 OS=Homo sapiens GN=ZNF768 PE=1 SV=2 1 102.085 0.000871068 102.08 71.014 102.08 2 S ESPGFESRSPGLVPPSPEFAPRSPESDSQSP X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPXXXXXXXXX S(1)PGLVPPS(1)PEFAPR S(102.08)PGLVPPS(102.08)PEFAPR 8 2 -0.99996 0 5415.6 0 0 8099.2 0 0 5243.7 0 0 7613 0 0 9535 0 0 5509.2 0 0 9406.3 0 0 8339.5 0 0 7536.7 0 0 39470 0 0 5123.9 0 0 7648.2 0 0 5342.3 0 0 7812.6 0 0 9419.1 0 0 5725.9 0 0 9529.7 0 0 9444.7 0 0 7515.8 0 0 37359 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 8049500 0 8049500 0 NaN 3522 1943 97 97 4104 4376 4666 5181 4666 5181 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18371 4666 5181 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18371 4666 5181 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18371 Q9H5H4 125 Q9H5H4 Q9H5H4 Zinc finger protein 768 ZNF768 sp|Q9H5H4|ZN768_HUMAN Zinc finger protein 768 OS=Homo sapiens GN=ZNF768 PE=1 SV=2 1 112.645 8.40385E-15 224.75 203.6 224.75 1 S QSPEFESQSPRYEPQSPGYEPRSPGYEPRSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX YEPQS(1)PGYEPR Y(-120.88)EPQS(112.65)PGY(-112.65)EPR 5 2 -0.10613 30422 0 0 62071 0 0 28650 0 0 54578 0 0 58769 0 0 30293 0 0 59062 0 0 51174 0 0 57126 0 0 18335 0 0 28781 0 0 58594 0 0 29320 0 0 56106 0 0 57863 0 0 31744 0 0 60053 0 0 51075 0 0 56449 0 0 18449 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 123660000 123660000 0 0 NaN 3523 1943 125 125 4115;5365 4388;5715 4679;6094 5195;6773 6094 6773 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10740 6094 6773 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10740 6094 6773 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10740 Q9H5H4 139 Q9H5H4 Q9H5H4 Zinc finger protein 768 ZNF768 sp|Q9H5H4|ZN768_HUMAN Zinc finger protein 768 OS=Homo sapiens GN=ZNF768 PE=1 SV=2 1 69.9566 5.83763E-11 180.9 162.6 180.9 1 S QSPGYEPRSPGYEPRSPGYESESSRYESQNT X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(1)PGYESESSRYESQNTELK S(69.96)PGY(-70.3)ES(-69.96)ES(-85.58)S(-91.63)RY(-135.46)ES(-122.54)QNT(-146.92)ELK 1 3 0.16158 10315 0 0 16581 0 0 10618 0 0 15134 0 0 15288 0 0 11198 0 0 19399 0 0 15497 0 0 17031 0 0 18753 0 0 9761.6 0 0 15655 0 0 10739 0 0 15564 0 0 15294 0 0 11489 0 0 19485 0 0 15943 0 0 16905 0 0 18017 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16985000 16985000 0 0 NaN 3524 1943 139 139 4116 4389 4680 5196 4680 5196 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12082 4680 5196 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12082 4680 5196 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12082 Q9H5H4 160 Q9H5H4 Q9H5H4 Zinc finger protein 768 ZNF768 sp|Q9H5H4|ZN768_HUMAN Zinc finger protein 768 OS=Homo sapiens GN=ZNF768 PE=1 SV=2 0.734847 4.42701 3.63025E-07 142.32 90.055 142.32 1 S ESSRYESQNTELKTQSPEFEAQSSKFQEGAE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX T(0.265)QS(0.735)PEFEAQSSK T(-4.43)QS(4.43)PEFEAQS(-105.38)S(-113.3)K 3 3 0.53083 14617 0 0 24561 0 0 18331 0 0 24448 0 0 21641 0 0 15531 0 0 22014 0 0 19252 0 0 26302 0 0 5921.1 0 0 13846 0 0 23202 0 0 18286 0 0 24966 0 0 21776 0 0 16023 0 0 22508 0 0 19345 0 0 25770 0 0 6021 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 65038000 65038000 0 0 NaN 3525 1943 160 160 4885 5210 5550 6169 5550 6169 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10981 5550 6169 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10981 5550 6169 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10981 Q9H6F5 58 Q9H6F5 Q9H6F5 Coiled-coil domain-containing protein 86 CCDC86 sp|Q9H6F5|CCD86_HUMAN Coiled-coil domain-containing protein 86 OS=Homo sapiens GN=CCDC86 PE=1 SV=1 1 59.2252 0.0182232 59.225 13.224 59.225 1 S REPGSPPSVQRAGLGSPERPPKTSPGSPRLQ X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX AGLGS(1)PERPPK AGLGS(59.23)PERPPK 5 3 0.46634 21576 0 0 24941 0 0 21717 0 0 24545 0 0 24748 0 0 20857 0 0 19375 0 0 22968 0 0 22915 0 0 3410 0 0 20417 0 0 23559 0 0 21887 0 0 25167 0 0 24863 0 0 21103 0 0 20077 0 0 23060 0 0 22460 0 0 3742.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 135230000 135230000 0 0 NaN 3526 1944 58 58 211 221 239 267 239 267 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10125 239 267 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10125 239 267 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10125 Q9H6F5 47 Q9H6F5 Q9H6F5 Coiled-coil domain-containing protein 86 CCDC86 sp|Q9H6F5|CCD86_HUMAN Coiled-coil domain-containing protein 86 OS=Homo sapiens GN=CCDC86 PE=1 SV=1 0.997899 27.2181 1.06117E-17 224.56 202 224.56 1 S LVEFESNPEETREPGSPPSVQRAGLGSPERP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X PPPPPPPPPPPPPPPPPPPPPPXXXXXXXXX ALVEFESNPEETREPGS(0.998)PPS(0.002)VQR ALVEFES(-102.03)NPEET(-36.81)REPGS(27.22)PPS(-27.22)VQR 17 3 -0.60735 7018.9 0 0 8299.8 0 0 7520 0 0 8073.4 0 0 6300.4 0 0 7208.6 0 0 6878.7 0 0 7620.2 0 0 8895.7 0 0 21604 0 0 6643.6 0 0 7839.2 0 0 7529.5 0 0 8289.4 0 0 6475.7 0 0 7310 0 0 7029.4 0 0 8278.6 0 0 8691.9 0 0 20519 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 102160000 102160000 0 0 NaN 3527 1944 47 47 328 349 374 415 374 415 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16294 374 415 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16294 374 415 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16294 Q9H6F5 217 Q9H6F5 Q9H6F5 Coiled-coil domain-containing protein 86 CCDC86 sp|Q9H6F5|CCD86_HUMAN Coiled-coil domain-containing protein 86 OS=Homo sapiens GN=CCDC86 PE=1 SV=1 0.938355 13.3203 0.000132866 123.76 76.456 123.76 1 S GETVTGGFGAKKRKGSSSQAPASKKLNKEEL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX KGS(0.938)S(0.044)S(0.018)QAPASK KGS(13.32)S(-13.32)S(-17.18)QAPAS(-65.59)K 3 2 -1.1487 12504 0 0 1821.9 0 0 11674 0 0 1971.1 0 0 5258.5 0 0 12959 0 0 5293 0 0 7015.3 0 0 2328.5 0 0 1175.8 0 0 11828 0 0 1721.9 0 0 11724 0 0 2191.3 0 0 5712.8 0 0 12427 0 0 5305 0 0 7302.6 0 0 2423.2 0 0 1269.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5433100 5433100 0 0 NaN 3528 1944 217 217 2082 2202 2371 2641 2371 2641 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7024 2371 2641 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7024 2371 2641 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7024 Q9H6F5 18 Q9H6F5 Q9H6F5 Coiled-coil domain-containing protein 86 CCDC86 sp|Q9H6F5|CCD86_HUMAN Coiled-coil domain-containing protein 86 OS=Homo sapiens GN=CCDC86 PE=1 SV=1 0.999894 39.8079 4.61208E-31 294.93 252.45 139.77 1 S TPLRRSRRLGGLRPESPESLTSVSRTRRALV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPXXXXXX RLGGLRPES(1)PESLTSVSR RLGGLRPES(39.81)PES(-39.81)LT(-57.5)S(-68.12)VS(-90.19)R 9 3 0.13848 20568 0 0 21625 0 0 21462 0 0 22993 0 0 16814 0 0 19310 0 0 17286 0 0 22001 0 0 24133 0 0 81983 0 0 19466 0 0 20436 0 0 21503 0 0 23466 0 0 17350 0 0 19708 0 0 17760 0 0 24435 0 0 23522 0 0 77706 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 146150000 146150000 0 0 NaN 3529 1944 18 18 2367;3310 2500;3511 2689;3748 3002;4164 3748 4164 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14009 2689 3002 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16542 2689 3002 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16542 Q9H6F5 80 Q9H6F5 Q9H6F5 Coiled-coil domain-containing protein 86 CCDC86 sp|Q9H6F5|CCD86_HUMAN Coiled-coil domain-containing protein 86 OS=Homo sapiens GN=CCDC86 PE=1 SV=1 1 196.724 2.20881E-12 196.72 176.28 196.72 2 S TSPGSPRLQQGAGLESPQGQPEPGAASPQRQ X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPPPPPX LQQGAGLES(1)PQGQPEPGAAS(1)PQR LQQGAGLES(196.72)PQGQPEPGAAS(196.72)PQR 9 3 -0.43611 0 5281 0 0 4694.3 0 0 5115.4 0 0 5391.1 0 0 4732.2 0 0 6183.5 0 0 4303.5 0 0 5171.7 0 0 5178.7 0 0 7403.3 0 0 4996.6 0 0 4438.5 0 0 5155 0 0 5505.6 0 0 4819.6 0 0 6164 0 0 4425.1 0 0 5449.9 0 0 5072.7 0 0 7090.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 27050000 0 27050000 0 NaN 3530 1944 80 80 2527;2528 2669;2670;2671 2866 3198 2866 3198 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12806 2866 3198 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12806 2866 3198 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12806 Q9H6F5 91 Q9H6F5 Q9H6F5 Coiled-coil domain-containing protein 86 CCDC86 sp|Q9H6F5|CCD86_HUMAN Coiled-coil domain-containing protein 86 OS=Homo sapiens GN=CCDC86 PE=1 SV=1 1 196.724 2.1173E-13 211.79 193.65 196.72 1;2 S AGLESPQGQPEPGAASPQRQQDLHLESPQRQ X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPX LQQGAGLES(1)PQGQPEPGAAS(1)PQR LQQGAGLES(196.72)PQGQPEPGAAS(196.72)PQR 20 3 -0.43611 19894 5281 0 23852 4694.3 0 21681 5115.4 0 24710 5391.1 0 17304 4732.2 0 13851 6183.5 0 14303 4303.5 0 23289 5171.7 0 25230 5178.7 0 24277 7403.3 0 18832 4996.6 0 22537 4438.5 0 21669 5155 0 25144 5505.6 0 17786 4819.6 0 14244 6164 0 14678 4425.1 0 23726 5449.9 0 24431 5072.7 0 23398 7090.8 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 1 1 0 1 1 0 2 1 0 2 1 0 2 1 0 610000000 582950000 27050000 0 NaN 3531 1944 91 91 2527;2528 2669;2670;2671 2865;2866;2867 3197;3198;3199 2866 3198 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12806 2867 3199 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13435 2867 3199 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13435 Q9H6F5 102 Q9H6F5 Q9H6F5 Coiled-coil domain-containing protein 86 CCDC86 sp|Q9H6F5|CCD86_HUMAN Coiled-coil domain-containing protein 86 OS=Homo sapiens GN=CCDC86 PE=1 SV=1 0.999987 48.8754 2.98286E-11 179.66 164.02 179.66 2 S PGAASPQRQQDLHLESPQRQPEYSPESPRCQ X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPXX QQDLHLES(1)PQRQPEYSPES(1)PR QQDLHLES(48.88)PQRQPEY(-91.66)S(-36.59)PES(36.59)PR 8 3 0.14019 0 7101.6 0 0 5951.8 0 0 6441 0 0 6405.3 0 0 4269.3 0 0 6426.5 0 0 4714.9 0 0 7121 0 0 5624.2 0 0 6208.3 0 0 6717.4 0 0 5625.1 0 0 6498 0 0 6549.4 0 0 4467.9 0 0 6461.1 0 0 4802.9 0 0 7303 0 0 5510.8 0 0 6010.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 27528000 0 27528000 0 NaN 3532 1944 102 102 2528;3111 2671;3299 3529 3912 3529 3912 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12048 3529 3912 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12048 3529 3912 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12048 Q9H6F5 113 Q9H6F5 Q9H6F5 Coiled-coil domain-containing protein 86 CCDC86 sp|Q9H6F5|CCD86_HUMAN Coiled-coil domain-containing protein 86 OS=Homo sapiens GN=CCDC86 PE=1 SV=1 0.999781 36.5927 2.98286E-11 179.66 164.02 179.66 1;2 S LHLESPQRQPEYSPESPRCQPKPSEEAPKCS X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX QQDLHLES(1)PQRQPEYSPES(1)PR QQDLHLES(48.88)PQRQPEY(-91.66)S(-36.59)PES(36.59)PR 19 3 0.14019 21396 7101.6 0 34771 5951.8 0 23053 6441 0 31444 6405.3 0 25898 4269.3 0 23321 6426.5 0 25021 4714.9 0 24036 7121 0 34406 5624.2 0 3285.5 6208.3 0 20252 6717.4 0 32828 5625.1 0 23151 6498 0 32359 6549.4 0 26110 4467.9 0 23754 6461.1 0 25769 4802.9 0 24181 7303 0 33550 5510.8 0 3650 6010.6 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 193450000 165920000 27528000 0 NaN 3533 1944 113 113 3097;3111 3285;3299 3515;3529 3897;3912 3529 3912 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12048 3529 3912 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12048 3529 3912 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12048 Q9H6F5 69 Q9H6F5 Q9H6F5 Coiled-coil domain-containing protein 86 CCDC86 sp|Q9H6F5|CCD86_HUMAN Coiled-coil domain-containing protein 86 OS=Homo sapiens GN=CCDC86 PE=1 SV=1 0.945488 13.8337 0.0448884 53.753 6.1538 53.753 1 S AGLGSPERPPKTSPGSPRLQQGAGLESPQGQ X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX T(0.015)S(0.039)PGS(0.945)PR T(-17.88)S(-13.83)PGS(13.83)PR 5 2 -0.27546 3440.2 0 0 2951.1 0 0 3190.7 0 0 3201 0 0 3568.4 0 0 3029.5 0 0 2724.1 0 0 2838.1 0 0 3128.4 0 0 4187.9 0 0 3254.4 0 0 2789.2 0 0 3230.2 0 0 3268.7 0 0 3587.4 0 0 3049.8 0 0 2824.5 0 0 2980.4 0 0 3069.6 0 0 4009.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1886400 1886400 0 0 NaN 3534 1944 69 69 4934 5259 5602 6226 5602 6226 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5250 5602 6226 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5250 5602 6226 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5250 Q9H6H4 152 Q9H6H4 Q9H6H4 Receptor expression-enhancing protein 4 REEP4 sp|Q9H6H4|REEP4_HUMAN Receptor expression-enhancing protein 4 OS=Homo sapiens GN=REEP4 PE=1 SV=1 0.99756 26.1153 0.00100142 115.29 66.685 115.29 1 S ATKSQGALAGRLRSFSMQDLRSISDAPAPAY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX S(0.002)FS(0.998)MQDLR S(-26.12)FS(26.12)MQDLR 3 2 -0.21438 19217 0 0 12895 0 0 19838 0 0 12051 0 0 9091.5 0 0 21078 0 0 10214 0 0 14995 0 0 15979 0 0 10617 0 0 18187 0 0 12176 0 0 19811 0 0 12570 0 0 9881.9 0 0 20668 0 0 10501 0 0 15596 0 0 15522 0 0 10344 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 62744000 62744000 0 0 NaN 3535 1945 152 152 3760 4000 4265 4740 4265 4740 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16697 4265 4740 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16697 4265 4740 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16697 Q9H6K1 215 Q9H6K1 Q9H6K1 Uncharacterized protein C6orf106 C6orf106 sp|Q9H6K1|CF106_HUMAN Uncharacterized protein C6orf106 OS=Homo sapiens GN=C6orf106 PE=1 SV=2 1 105.906 0.00019098 105.91 82.577 105.91 1 S TQPHRKVEGNFNPFASPQKNRQSDENNLKDP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPXXXXXXXXXXXX KVEGNFNPFAS(1)PQK KVEGNFNPFAS(105.91)PQK 11 3 0.47811 10982 0 0 20794 0 0 12151 0 0 19721 0 0 8358.8 0 0 12181 0 0 10799 0 0 13725 0 0 20563 0 0 15650 0 0 10396 0 0 19638 0 0 12126 0 0 20193 0 0 8750.2 0 0 12595 0 0 11143 0 0 14179 0 0 19876 0 0 15054 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23182000 23182000 0 0 NaN 3536 1946 215 215 2261 2389 2571 2869 2571 2869 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17829 2571 2869 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17829 2571 2869 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17829 Q9H6S0 1202 Q9H6S0 Q9H6S0 Probable ATP-dependent RNA helicase YTHDC2 YTHDC2 sp|Q9H6S0|YTDC2_HUMAN Probable ATP-dependent RNA helicase YTHDC2 OS=Homo sapiens GN=YTHDC2 PE=1 SV=2 0.970604 15.204 2.19088E-23 282.77 249.53 282.77 1 S LPLASSWRSNNSRKSSADTEFSDECTTAERV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX KS(0.029)S(0.971)ADTEFSDECTTAER KS(-15.2)S(15.2)ADT(-39.42)EFS(-96.71)DECT(-172.44)T(-189.22)AER 3 3 -2.3626 51425 0 0 43166 0 0 54419 0 0 41643 0 0 42557 0 0 57800 0 0 43704 0 0 47227 0 0 44136 0 0 46630 0 0 48672 0 0 40769 0 0 54482 0 0 43110 0 0 43904 0 0 57170 0 0 44444 0 0 49187 0 0 43531 0 0 45001 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 43975000 43975000 0 0 NaN 3537 1947 1202 1202 2226 2353 2534 2830;2831 2534 2830 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10447 2534 2830 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10447 2534 2830 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10447 Q9H6Z4 211 Q9H6Z4 Q9H6Z4 Ran-binding protein 3 RANBP3 sp|Q9H6Z4|RANB3_HUMAN Ran-binding protein 3 OS=Homo sapiens GN=RANBP3 PE=1 SV=1 0.905853 9.9205 1.38598E-05 117.29 96.695 117.29 1 S GVSLPADCTGAVPAASPDTAAWRSPSEAADE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPXXXXXXXX ALSQTVPSSGTNGVSLPADCT(0.002)GAVPAAS(0.906)PDT(0.092)AAWR ALS(-92.28)QT(-84.83)VPS(-75.72)S(-71.52)GT(-67.91)NGVS(-50.57)LPADCT(-26.83)GAVPAAS(9.92)PDT(-9.92)AAWR 28 4 0.95379 2169.1 0 0 1665.7 0 0 2355.1 0 0 1893.4 0 0 2940.6 0 0 2107.9 0 0 2463.8 0 0 2543.8 0 0 2490.2 0 0 14964 0 0 2053.2 0 0 1574.8 0 0 2367 0 0 1933.7 0 0 2942.8 0 0 2137 0 0 2531.6 0 0 2985.6 0 0 2455.9 0 0 14150 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12257000 12257000 0 0 NaN 3538 1948 211 211 320 341 364 404 364 404 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19433 364 404 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19433 364 404 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19433 Q9H6Z4 125 Q9H6Z4 Q9H6Z4 Ran-binding protein 3 RANBP3 sp|Q9H6Z4|RANB3_HUMAN Ran-binding protein 3 OS=Homo sapiens GN=RANBP3 PE=1 SV=1 0.354318 0 0.00544775 92.236 67.3 92.236 S REDGNYCPPVKRERTSSLTQFPPSQSEERSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T(0.354)S(0.354)S(0.271)LT(0.021)QFPPSQSEER T(0)S(0)S(-1.17)LT(-12.32)QFPPS(-87.36)QS(-87.6)EER 2 3 -0.87448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3539 1948 125 125 4964 5292 5636 6265 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14366 5636 6265 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14366 5636 6265 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14366 Q9H6Z4 126 Q9H6Z4 Q9H6Z4 Ran-binding protein 3 RANBP3 sp|Q9H6Z4|RANB3_HUMAN Ran-binding protein 3 OS=Homo sapiens GN=RANBP3 PE=1 SV=1 0.989147 19.9457 6.34972E-23 276.47 226.26 244.36 1 S EDGNYCPPVKRERTSSLTQFPPSQSEERSSG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX TSS(0.989)LT(0.01)QFPPSQSEER T(-33.73)S(-33.73)S(19.95)LT(-19.95)QFPPS(-120.44)QS(-132.27)EER 3 2 -0.1928 7383.9 0 0 5024.7 0 0 8781.8 0 0 5650.9 0 0 6878 0 0 8394 0 0 7033.6 0 0 7173.2 0 0 5451 0 0 9699.9 0 0 6992.3 0 0 4750.2 0 0 8739.4 0 0 5808 0 0 7092.9 0 0 8294.3 0 0 7108.8 0 0 7534.8 0 0 5445.6 0 0 9299.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14613000 14613000 0 0 NaN 3540 1948 126 126 4964 5292 5637;5638 6266;6267 5638 6267 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14617 5637 6266 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14167 5637 6266 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14167 Q9H6Z4 333 Q9H6Z4 Q9H6Z4 Ran-binding protein 3 RANBP3 sp|Q9H6Z4|RANB3_HUMAN Ran-binding protein 3 OS=Homo sapiens GN=RANBP3 PE=1 SV=1 0.998808 30.6636 1.40719E-10 179.5 145.82 179.5 1 S SNKFVFGQNMSERVLSPPKLNEVSSDANREN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX VLS(0.999)PPKLNEVS(0.001)SDANR VLS(30.66)PPKLNEVS(-30.66)S(-34.75)DANR 3 3 -0.21096 116070 0 0 116610 0 0 104270 0 0 124140 0 0 76108 0 0 109780 0 0 79185 0 0 109580 0 0 125390 0 0 25725 0 0 109780 0 0 110200 0 0 105330 0 0 126770 0 0 78984 0 0 110730 0 0 81721 0 0 110700 0 0 121760 0 0 26760 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 203340000 203340000 0 0 NaN 3541 1948 333 333 5179 5518 5880 6534;6535 5880 6535 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16625 5880 6535 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16625 5880 6535 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16625 Q9H7D7 121 Q9H7D7 Q9H7D7 WD repeat-containing protein 26 WDR26 sp|Q9H7D7|WDR26_HUMAN WD repeat-containing protein 26 OS=Homo sapiens GN=WDR26 PE=1 SV=3 0.97931 16.7515 0.000356497 117.48 80.808 117.48 1 S ATPELGSSLKKKKRLSQSDEDVIRLIGQHLN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX RLS(0.979)QS(0.021)DEDVIR RLS(16.75)QS(-16.75)DEDVIR 3 2 3.5019 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3542 1949 121 121 3343 3545 3782 4200 3782 4200 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11094 3782 4200 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11094 3782 4200 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11094 Q9H7F0 176 Q9H7F0 Q9H7F0 Probable cation-transporting ATPase 13A3 ATP13A3 sp|Q9H7F0|AT133_HUMAN Probable cation-transporting ATPase 13A3 OS=Homo sapiens GN=ATP13A3 PE=1 SV=4 0.986474 18.6291 0.0205318 58.981 35.961 58.981 1 S GLDEGVSCTSIYEKHSAGLTKGMHAYRKLLY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPXXXXXXXXXX HS(0.986)AGLT(0.014)K HS(18.63)AGLT(-18.63)K 2 3 -0.5053 133120 0 0 182330 0 0 137840 0 0 199780 0 0 155270 0 0 138650 0 0 150030 0 0 172630 0 0 228610 0 0 10971 0 0 125980 0 0 172340 0 0 138730 0 0 203080 0 0 156540 0 0 142150 0 0 155120 0 0 172170 0 0 222240 0 0 14326 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 93379000 93379000 0 0 NaN 3543 1950 176 176 1745 1841 1987 2214 1987 2214 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6938 1987 2214 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6938 1987 2214 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6938 Q9H7F0 98 Q9H7F0 Q9H7F0 Probable cation-transporting ATPase 13A3 ATP13A3 sp|Q9H7F0|AT133_HUMAN Probable cation-transporting ATPase 13A3 OS=Homo sapiens GN=ATP13A3 PE=1 SV=4 0.860197 7.89082 0.000165952 102.38 81.715 102.38 1 S CAKIRVLSLETYPVSSPKSMSNKLSNGHAVC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPXXXXXXXXXXXXX VLSLETYPVS(0.14)S(0.86)PK VLS(-90.21)LET(-74.29)Y(-60.98)PVS(-7.89)S(7.89)PK 11 3 0.58728 3842.1 0 0 4906.8 0 0 6223 0 0 5397 0 0 4281.2 0 0 4912.2 0 0 5116.3 0 0 5460.4 0 0 4989.4 0 0 9894 0 0 3644.5 0 0 4638.1 0 0 6107.2 0 0 5503.8 0 0 4470.9 0 0 4970.9 0 0 5164.4 0 0 5754 0 0 4928.4 0 0 9442.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 4961600 4961600 0 0 NaN 3544 1950 98 98 5175 5514 5876 6530 5876 6530 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20524 5876 6530 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20524 5876 6530 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20524 Q9H7L9 234 Q9H7L9 Q9H7L9 Sin3 histone deacetylase corepressor complex component SDS3 SUDS3 sp|Q9H7L9|SDS3_HUMAN Sin3 histone deacetylase corepressor complex component SDS3 OS=Homo sapiens GN=SUDS3 PE=1 SV=2 0.974557 13.7552 0.000506029 100.06 79.799 100.06 2 S DLRTLNKLKSPKRPASPSSPEHLPATPAESP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP RPAS(0.975)PS(0.594)S(0.398)PEHLPAT(0.034)PAESPAQR RPAS(13.76)PS(1.82)S(-1.82)PEHLPAT(-12.45)PAES(-43.59)PAQR 4 3 -0.025311 0 7058.7 0 0 7614.2 0 0 10132 0 0 7263.8 0 0 8719.7 0 0 9585.5 0 0 10847 0 0 9895.8 0 0 7645.8 0 0 4447.9 0 0 6690.8 0 0 7190.9 0 0 10012 0 0 7516.9 0 0 8959.2 0 0 9516.7 0 0 10851 0 0 10048 0 0 7679.8 0 0 4417.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 41494000 0 41494000 0 NaN 3545 1951 234 234 3376 3584 3824 4247 3824 4247 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10032 3824 4247 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10032 3824 4247 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10032 Q9H7L9 236 Q9H7L9 Q9H7L9 Sin3 histone deacetylase corepressor complex component SDS3 SUDS3 sp|Q9H7L9|SDS3_HUMAN Sin3 histone deacetylase corepressor complex component SDS3 OS=Homo sapiens GN=SUDS3 PE=1 SV=2 0.593508 1.8234 0.000506029 100.06 79.799 100.06 2 S RTLNKLKSPKRPASPSSPEHLPATPAESPAQ X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP RPAS(0.975)PS(0.594)S(0.398)PEHLPAT(0.034)PAESPAQR RPAS(13.76)PS(1.82)S(-1.82)PEHLPAT(-12.45)PAES(-43.59)PAQR 6 3 -0.025311 0 7058.7 0 0 7614.2 0 0 10132 0 0 7263.8 0 0 8719.7 0 0 9585.5 0 0 10847 0 0 9895.8 0 0 7645.8 0 0 4447.9 0 0 6690.8 0 0 7190.9 0 0 10012 0 0 7516.9 0 0 8959.2 0 0 9516.7 0 0 10851 0 0 10048 0 0 7679.8 0 0 4417.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 41494000 0 41494000 0 NaN 3546 1951 236 236 3376 3584 3824 4247 3824 4247 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10032 3824 4247 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10032 3824 4247 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10032 Q9H7M9 235 Q9H7M9 Q9H7M9 Platelet receptor Gi24 C10orf54 sp|Q9H7M9|GI24_HUMAN Platelet receptor Gi24 OS=Homo sapiens GN=C10orf54 PE=1 SV=3 1 89.776 5.54222E-12 190.72 172.85 190.72 1 S QAASNRRAQELVRMDSNIQGIENPGFEASPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP MDS(1)NIQGIENPGFEASPPAQGIPEAK MDS(89.78)NIQGIENPGFEAS(-89.78)PPAQGIPEAK 3 3 -0.029816 2547.7 0 0 2322.8 0 0 3283.3 0 0 1803.3 0 0 10909 0 0 3650.3 0 0 10788 0 0 6713.3 0 0 2363.7 0 0 24562 0 0 2413.5 0 0 2191.3 0 0 3356.9 0 0 1913 0 0 10610 0 0 3661 0 0 10756 0 0 7355.3 0 0 2689.6 0 0 23283 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14660000 14660000 0 0 NaN 3547 1952 235 235 2679 2832 3037 3382 3037 3382 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19900 3037 3382 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19900 3037 3382 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19900 Q9H7N4 453 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 SCAF1 sp|Q9H7N4|SFR19_HUMAN Splicing factor, arginine/serine-rich 19 OS=Homo sapiens GN=SCAF1 PE=1 SV=3 0.999223 31.0913 3.21934E-46 349.58 325.47 349.58 1 S PRAPEGDDFLSLHAESDGEGALQVDLGEPAP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPPPPPPPPPPP APEGDDFLS(0.001)LHAES(0.999)DGEGALQVDLGEPAPAPPAADSR APEGDDFLS(-31.09)LHAES(31.09)DGEGALQVDLGEPAPAPPAADS(-267.68)R 14 3 -1.1657 885.64 0 0 2215.6 0 0 453.1 0 0 2284.3 0 0 1009.7 0 0 728 0 0 1532.7 0 0 3439.1 0 0 3335.9 0 0 68477 0 0 836.42 0 0 2093.4 0 0 456.3 0 0 2316.3 0 0 1000.8 0 0 962.12 0 0 1584.4 0 0 5407.9 0 0 3215.1 0 0 64559 0 0 2 0 0 2 0 0 1 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 22705000 22705000 0 0 NaN 3548 1953 453 453 351 377 409 451;452 409 451 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21777 409 451 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21777 409 451 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21777 Q9H7N4 548 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 SCAF1 sp|Q9H7N4|SFR19_HUMAN Splicing factor, arginine/serine-rich 19 OS=Homo sapiens GN=SCAF1 PE=1 SV=3 0.954528 13.2204 4.1079E-08 162.07 141.87 162.07 1 S ASSSSGTQPAPPAPASPWDSKKHRSRDRKPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPXXXXXXXXX EAASSSSGTQPAPPAPAS(0.955)PWDS(0.045)KK EAAS(-108.27)S(-103.06)S(-96.82)S(-90.19)GT(-83.32)QPAPPAPAS(13.22)PWDS(-13.22)KK 18 4 0.32698 12682 0 0 10994 0 0 13275 0 0 10580 0 0 7056.7 0 0 12782 0 0 6841.1 0 0 10523 0 0 10094 0 0 9888 0 0 12003 0 0 10384 0 0 13256 0 0 10924 0 0 7528.3 0 0 12704 0 0 7063.1 0 0 10941 0 0 9822 0 0 9554.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20872000 20872000 0 0 NaN 3549 1953 548 548 863 916 993 1099 993 1099 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14076 993 1099 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14076 993 1099 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14076 Q9H7N4 239 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 SCAF1 sp|Q9H7N4|SFR19_HUMAN Splicing factor, arginine/serine-rich 19 OS=Homo sapiens GN=SCAF1 PE=1 SV=3 0.959462 15.3087 6.08341E-05 104.87 90.104 104.87 1 S RFDIYDPFHPTDEAYSPPPAPEQKYDPFEPT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPPPPPPXXXXXXX FDIYDPFHPT(0.028)DEAY(0.012)S(0.959)PPPAPEQK FDIY(-58.3)DPFHPT(-15.31)DEAY(-18.93)S(15.31)PPPAPEQK 15 4 -0.97189 17638 0 0 22775 0 0 16341 0 0 21121 0 0 14134 0 0 22291 0 0 25794 0 0 25442 0 0 24095 0 0 137420 0 0 16685 0 0 21505 0 0 16524 0 0 21806 0 0 14637 0 0 22589 0 0 25650 0 0 29538 0 0 23847 0 0 129980 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 27462000 27462000 0 0 NaN 3550 1953 239 239 1244 1309 1410 1562;1563 1410 1562 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23043 1410 1562 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23043 1410 1562 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23043 Q9H7N4 965 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 SCAF1 sp|Q9H7N4|SFR19_HUMAN Splicing factor, arginine/serine-rich 19 OS=Homo sapiens GN=SCAF1 PE=1 SV=3 0.99999 50.3601 6.41413E-16 222.21 190.61 222.21 1 S CSQAAGTKGAEETSWSGEERAAKVPSTPPPK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX GAEETSWS(1)GEER GAEET(-64.21)S(-50.36)WS(50.36)GEER 8 2 -0.2727 38480 0 0 53426 0 0 33361 0 0 51413 0 0 59792 0 0 42224 0 0 57283 0 0 51792 0 0 56058 0 0 6418.3 0 0 36392 0 0 50458 0 0 34206 0 0 52764 0 0 59080 0 0 42866 0 0 58396 0 0 51773 0 0 55364 0 0 7242.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 94467000 94467000 0 0 NaN 3551 1953 965 965 1355 1429 1537 1700 1537 1700 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9790 1537 1700 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9790 1537 1700 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9790 Q9H7N4 719 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 SCAF1 sp|Q9H7N4|SFR19_HUMAN Splicing factor, arginine/serine-rich 19 OS=Homo sapiens GN=SCAF1 PE=1 SV=3 1 65.2054 2.34628E-05 132.39 99.869 132.39 2 S TITVGRLDKSDPRGPSPAPASSPKREVLYDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX GPS(1)PAPAS(0.009)S(0.991)PKR GPS(65.21)PAPAS(-20.3)S(20.3)PKR 3 2 -0.060228 0 24926 0 0 30030 0 0 24158 0 0 27383 0 0 19871 0 0 24645 0 0 21566 0 0 25150 0 0 30693 0 0 5217.1 0 0 23584 0 0 28354 0 0 24320 0 0 28234 0 0 20450 0 0 24842 0 0 22121 0 0 25365 0 0 29898 0 0 5494.6 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 27264000 0 27264000 0 NaN 3552 1953 719 719 1562;1563 1646;1647 1779;1780 1977;1978 1780 1978 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6927 1780 1978 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6927 1780 1978 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6927 Q9H7N4 724 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 SCAF1 sp|Q9H7N4|SFR19_HUMAN Splicing factor, arginine/serine-rich 19 OS=Homo sapiens GN=SCAF1 PE=1 SV=3 0.685448 3.38277 0.011652 94.09 67.492 94.09 2 S RLDKSDPRGPSPAPASSPKREVLYDSEGLSG X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX GPS(1)PAPAS(0.685)S(0.315)PK GPS(49.27)PAPAS(3.38)S(-3.38)PK 8 2 1.3104 0 13146 0 0 14565 0 0 12530 0 0 13360 0 0 11293 0 0 12485 0 0 10818 0 0 13232 0 0 14981 0 0 3661 0 0 12437 0 0 13752 0 0 12637 0 0 13777 0 0 11531 0 0 12570 0 0 11149 0 0 13354 0 0 14606 0 0 3753.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 10945000 0 10945000 0 NaN 3553 1953 724 724 1562;1563 1646;1647 1779 1977 1779 1977 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8362 1779 1977 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8362 1779 1977 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8362 Q9H7N4 725 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 SCAF1 sp|Q9H7N4|SFR19_HUMAN Splicing factor, arginine/serine-rich 19 OS=Homo sapiens GN=SCAF1 PE=1 SV=3 0.990745 20.2958 2.34628E-05 132.39 99.869 132.39 2 S LDKSDPRGPSPAPASSPKREVLYDSEGLSGE X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPXXXXXXXXXXXX GPS(1)PAPAS(0.009)S(0.991)PKR GPS(65.21)PAPAS(-20.3)S(20.3)PKR 9 2 -0.060228 0 11781 0 0 15465 0 0 11627 0 0 14023 0 0 8577.4 0 0 12160 0 0 10748 0 0 11919 0 0 15712 0 0 1556.1 0 0 11147 0 0 14601 0 0 11684 0 0 14457 0 0 8919.8 0 0 12272 0 0 10972 0 0 12011 0 0 15292 0 0 1741.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 16319000 0 16319000 0 NaN 3554 1953 725 725 1562;1563 1646;1647 1780 1978 1780 1978 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6927 1780 1978 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6927 1780 1978 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6927 Q9H7N4 526 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 SCAF1 sp|Q9H7N4|SFR19_HUMAN Splicing factor, arginine/serine-rich 19 OS=Homo sapiens GN=SCAF1 PE=1 SV=3 1 77.1399 0.00992138 77.14 10.027 77.14 1 S AGPPTRKKSRRERKRSGEAKEAASSSSGTQP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX KRS(1)GEAK KRS(77.14)GEAK 3 4 0.22258 18906 0 0 25453 0 0 18780 0 0 23353 0 0 18180 0 0 18039 0 0 19137 0 0 22101 0 0 26835 0 0 5107.2 0 0 17890 0 0 24033 0 0 18912 0 0 24020 0 0 18505 0 0 18379 0 0 19645 0 0 22166 0 0 26152 0 0 5320.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9594100 9594100 0 0 NaN 3555 1953 526 526 2199 2325 2506 2797 2506 2797 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5650 2506 2797 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5650 2506 2797 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5650 Q9H7N4 498 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 SCAF1 sp|Q9H7N4|SFR19_HUMAN Splicing factor, arginine/serine-rich 19 OS=Homo sapiens GN=SCAF1 PE=1 SV=3 0.999996 54.5025 0.0145353 67.571 57.472 67.571 2 S RRKILTQRRERYRQRSPSPAPAPAPAAAAGP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP QRS(1)PS(1)PAPAPAPAAAAGPPTR QRS(54.5)PS(47.36)PAPAPAPAAAAGPPT(-47.36)R 3 3 0.2816 0 12505 0 0 12978 0 0 13219 0 0 12757 0 0 11792 0 0 13349 0 0 12133 0 0 11886 0 0 14159 0 0 12124 0 0 11835 0 0 12259 0 0 13252 0 0 13122 0 0 12058 0 0 13358 0 0 12390 0 0 12344 0 0 13885 0 0 11691 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 28577000 0 28577000 0 NaN 3556 1953 498 498 3129 3320 3550 3935 3550 3935 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8505 3550 3935 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8505 3550 3935 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8505 Q9H7N4 500 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 SCAF1 sp|Q9H7N4|SFR19_HUMAN Splicing factor, arginine/serine-rich 19 OS=Homo sapiens GN=SCAF1 PE=1 SV=3 0.999982 47.3557 0.0145353 67.571 57.472 67.571 2 S KILTQRRERYRQRSPSPAPAPAPAAAAGPPT X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP QRS(1)PS(1)PAPAPAPAAAAGPPTR QRS(54.5)PS(47.36)PAPAPAPAAAAGPPT(-47.36)R 5 3 0.2816 0 12505 0 0 12978 0 0 13219 0 0 12757 0 0 11792 0 0 13349 0 0 12133 0 0 11886 0 0 14159 0 0 12124 0 0 11835 0 0 12259 0 0 13252 0 0 13122 0 0 12058 0 0 13358 0 0 12390 0 0 12344 0 0 13885 0 0 11691 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 28577000 0 28577000 0 NaN 3557 1953 500 500 3129 3320 3550 3935 3550 3935 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8505 3550 3935 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8505 3550 3935 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8505 Q9H7N4 874 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 SCAF1 sp|Q9H7N4|SFR19_HUMAN Splicing factor, arginine/serine-rich 19 OS=Homo sapiens GN=SCAF1 PE=1 SV=3 1 57.7917 0.0192189 57.792 29.56 57.792 1 S LGSIGVKFSRDRESRSPFLKPDERAPTEMAK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(1)PFLKPDER S(57.79)PFLKPDER 1 3 0.75476 13257 0 0 15256 0 0 15391 0 0 16857 0 0 9433.8 0 0 14188 0 0 8823.5 0 0 13535 0 0 15526 0 0 3256 0 0 12552 0 0 14421 0 0 15301 0 0 17168 0 0 9922.9 0 0 14338 0 0 9194.5 0 0 13700 0 0 15036 0 0 3379.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30822000 30822000 0 0 NaN 3558 1953 874 874 4096 4367 4657 5170 4657 5170 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13731 4657 5170 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13731 4657 5170 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13731 Q9H7N4 975 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 SCAF1 sp|Q9H7N4|SFR19_HUMAN Splicing factor, arginine/serine-rich 19 OS=Homo sapiens GN=SCAF1 PE=1 SV=3 0.5 0 0.00774427 80.688 58.696 80.688 1 S EETSWSGEERAAKVPSTPPPKAAPPPPALTP X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX VPS(0.5)T(0.5)PPPK VPS(0)T(0)PPPK 3 3 0.14087 11525 0 0 10918 0 0 13484 0 0 9932.5 0 0 10768 0 0 12562 0 0 10905 0 0 10968 0 0 11155 0 0 1444 0 0 10913 0 0 10308 0 0 13432 0 0 10301 0 0 11090 0 0 12457 0 0 11101 0 0 11107 0 0 10996 0 0 1613.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18063000 18063000 0 0 NaN 3559 1953 975 975 5214 5558 5922 6580 5922 6580 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11302 5922 6580 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11302 5922 6580 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11302 Q9H7Z6 42 Q9H7Z6 Q9H7Z6 Histone acetyltransferase KAT8 KAT8 sp|Q9H7Z6|KAT8_HUMAN Histone acetyltransferase KAT8 OS=Homo sapiens GN=KAT8 PE=1 SV=2 0.753769 5.35942 1.9075E-36 216.49 190.7 216.49 1 S ENAAAEGTAPSPGRVSPPTPARGEPEVTVEI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPXXXXXXXXX AAQGAAAAVAAGTSGVAGEGEPGPGENAAAEGTAPS(0.027)PGRVS(0.754)PPT(0.219)PAR AAQGAAAAVAAGT(-180.4)S(-173.6)GVAGEGEPGPGENAAAEGT(-39.02)APS(-14.51)PGRVS(5.36)PPT(-5.36)PAR 41 4 -0.40416 1644.4 0 0 1768.4 0 0 1390 0 0 685.14 0 0 1262.6 0 0 1687.9 0 0 1309.7 0 0 1460.9 0 0 1666.4 0 0 10854 0 0 1555.1 0 0 1664.4 0 0 1412.8 0 0 785.7 0 0 1289.8 0 0 1664.7 0 0 1340.7 0 0 1801.2 0 0 1629.1 0 0 10254 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 67445000 67445000 0 0 NaN 3560 1954 42 42 57 61 66 78 66 78 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16679 66 78 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16679 66 78 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16679 Q9H813 7 Q9H813 Q9H813 Transmembrane protein 206 TMEM206 sp|Q9H813|TM206_HUMAN Transmembrane protein 206 OS=Homo sapiens GN=TMEM206 PE=1 SV=1 0.356394 0 2.11891E-25 261.81 232.54 261.81 S _________MIRQERSTSYQELSEELVQVVE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.356)T(0.356)S(0.286)Y(0.001)QELSEELVQVVENSELADEQDKETVR S(0)T(0)S(-0.95)Y(-25.21)QELS(-66.6)EELVQVVENS(-232.7)ELADEQDKET(-256.29)VR 1 4 -0.16698 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3561 1955 7 7 4537 4839 5156 5725 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23738 5156 5725 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23738 5156 5725 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23738 Q9H814 350 Q9H814 Q9H814 Phosphorylated adapter RNA export protein PHAX sp|Q9H814|PHAX_HUMAN Phosphorylated adapter RNA export protein OS=Homo sapiens GN=PHAX PE=1 SV=1 0.706861 3.8289 1.55E-86 447.06 417.48 447.06 1 S KQAIKSLNFQEDDDTSRETFASDTNEALASL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPPPPPPP SLNFQEDDDT(0.293)S(0.707)RETFASDTNEALASLDESQEGHAEAK S(-76.82)LNFQEDDDT(-3.83)S(3.83)RET(-32.22)FAS(-106.68)DT(-150.25)NEALAS(-283.19)LDES(-340.59)QEGHAEAK 11 4 0.18332 523.45 0 0 2437.2 0 0 1648.9 0 0 2674.3 0 0 1352.5 0 0 2008.7 0 0 1329.2 0 0 3848 0 0 1975.7 0 0 55164 0 0 499.54 0 0 2303.7 0 0 1592 0 0 2720.8 0 0 1390.3 0 0 2170.1 0 0 1371.9 0 0 5450.8 0 0 1922 0 0 52033 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 32472000 32472000 0 0 NaN 3562 1956 350 350 3952 4211 4494 4996 4494 4996 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20487 4494 4996 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20487 4494 4996 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20487 Q9H814 368 Q9H814 Q9H814 Phosphorylated adapter RNA export protein PHAX sp|Q9H814|PHAX_HUMAN Phosphorylated adapter RNA export protein OS=Homo sapiens GN=PHAX PE=1 SV=1 1 78.8783 4.90588E-72 403.89 378.61 403.89 1 S TFASDTNEALASLDESQEGHAEAKLEAEEAI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPXXXXXXX SLNFQEDDDTSRETFASDTNEALASLDES(1)QEGHAEAK S(-308.04)LNFQEDDDT(-238.65)S(-231.29)RET(-219.22)FAS(-206.98)DT(-178.77)NEALAS(-78.88)LDES(78.88)QEGHAEAK 29 4 0.33521 3367.9 0 0 1102.9 0 0 2508 0 0 2127.8 0 0 1522.6 0 0 3247.6 0 0 2718.3 0 0 3846.5 0 0 2799.1 0 0 94897 0 0 3183.7 0 0 1047.7 0 0 2565.1 0 0 2140.2 0 0 1620.3 0 0 3391.5 0 0 2711.8 0 0 6694.6 0 0 2758.4 0 0 89446 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 12817000 12817000 0 0 NaN 3563 1956 368 368 3952 4211 4493 4994;4995 4493 4994 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19881 4493 4994 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19881 4493 4994 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19881 Q9H869;Q3T8J9 711;1255 Q9H869 Q9H869 YY1-associated protein 1;GON-4-like protein YY1AP1;GON4L sp|Q9H869|YYAP1_HUMAN YY1-associated protein 1 OS=Homo sapiens GN=YY1AP1 PE=1 SV=2;sp|Q3T8J9|GON4L_HUMAN GON-4-like protein OS=Homo sapiens GN=GON4L PE=1 SV=1 0.997232 25.6859 0.00865805 77.871 56.918 77.871 1 S NAFQGLEPKLEPQELSPLSATVFPKVEHSPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X XXXXXXXXXPPPPPPPPPPPPPPPPXXXXXX LEPQELS(0.997)PLS(0.003)ATVFPK LEPQELS(25.69)PLS(-25.69)AT(-41.23)VFPK 7 3 1.0378 11686 0 0 14904 0 0 11849 0 0 14102 0 0 11248 0 0 15628 0 0 10718 0 0 15938 0 0 17407 0 0 153080 0 0 11058 0 0 14075 0 0 11913 0 0 14553 0 0 11449 0 0 15889 0 0 11118 0 0 20588 0 0 16892 0 0 144510 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 70984000 70984000 0 0 NaN 3564 1957 711 711 2334 2467 2656 2968 2656 2968 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23479 2656 2968 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23479 2656 2968 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23479 Q9H869 724 Q9H869 Q9H869 YY1-associated protein 1 YY1AP1 sp|Q9H869|YYAP1_HUMAN YY1-associated protein 1 OS=Homo sapiens GN=YY1AP1 PE=1 SV=2 1 97.7666 0.00132744 97.767 75.189 97.767 1 S ELSPLSATVFPKVEHSPGPPPVDKQCQEGLS X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX VEHS(1)PGPPPVDK VEHS(97.77)PGPPPVDK 4 3 1.3964 18095 0 0 20131 0 0 19390 0 0 22280 0 0 14277 0 0 17747 0 0 15809 0 0 18952 0 0 18798 0 0 3411.3 0 0 17128 0 0 19029 0 0 19390 0 0 22673 0 0 14814 0 0 18013 0 0 16101 0 0 19067 0 0 18421 0 0 3650.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21839000 21839000 0 0 NaN 3565 1957 724 724 5090 5425 5777 6421 5777 6421 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10103 5777 6421 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10103 5777 6421 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10103 Q9H8G2 312 Q9H8G2 Q9H8G2 Caspase activity and apoptosis inhibitor 1 CAAP1 sp|Q9H8G2|CAAP1_HUMAN Caspase activity and apoptosis inhibitor 1 OS=Homo sapiens GN=CAAP1 PE=1 SV=2 0.923637 10.8262 0.00378774 91.238 74.554 91.238 1 S DIEKSVNEILGLAESSPNEPKAATLAVPPPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPXXXXXXXXXX SVNEILGLAES(0.076)S(0.924)PNEPK S(-71.93)VNEILGLAES(-10.83)S(10.83)PNEPK 12 3 0.5764 6718.3 0 0 5978 0 0 7607.1 0 0 5473.1 0 0 5567.3 0 0 7377 0 0 5772.1 0 0 8176.7 0 0 6626.4 0 0 27201 0 0 6360.6 0 0 5644.4 0 0 7584.2 0 0 5681 0 0 5773.9 0 0 7370.6 0 0 5889.1 0 0 8990.4 0 0 6502.1 0 0 25803 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14480000 14480000 0 0 NaN 3566 1958 312 312 4556 4860 5177 5749 5177 5749 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21940 5177 5749 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21940 5177 5749 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21940 Q9H8M2 566 Q9H8M2 Q9H8M2 Bromodomain-containing protein 9 BRD9 sp|Q9H8M2|BRD9_HUMAN Bromodomain-containing protein 9 OS=Homo sapiens GN=BRD9 PE=1 SV=2 0.62779 2.27026 0.0010029 98.943 51.384 98.943 1 S SSLSNASERDQHHLGSPSRLSVGEQPDVTHD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX DQHHLGS(0.628)PS(0.372)R DQHHLGS(2.27)PS(-2.27)R 7 3 0.78056 3789.1 0 0 3930.5 0 0 3918.4 0 0 3276 0 0 3350.9 0 0 4312.8 0 0 4415.8 0 0 4361 0 0 4290.2 0 0 3885.5 0 0 3585.9 0 0 3709.2 0 0 3933.3 0 0 3420.3 0 0 3448.9 0 0 4284.6 0 0 4440.3 0 0 4489.6 0 0 4238.4 0 0 3759.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 4906800 4906800 0 0 NaN 3567 1959 566 566 779 826 881 972 881 972 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5064 881 972 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5064 881 972 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5064 Q9H8N7 447 Q9H8N7 Q9H8N7 Zinc finger protein 395 ZNF395 sp|Q9H8N7|ZN395_HUMAN Zinc finger protein 395 OS=Homo sapiens GN=ZNF395 PE=1 SV=2 0.478776 0 7.79812E-05 121.34 105.25 121.34 S AAPSAACSLSPVRSRSLSFSEPQQPAPAMKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPX S(0.479)LS(0.479)FS(0.042)EPQQPAPAMK S(0)LS(0)FS(-10.52)EPQQPAPAMK 1 3 0.032229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3568 1960 447 447 3983 4246 4531 5037 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17505 4531 5037 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17505 4531 5037 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17505 Q9H8N7 449 Q9H8N7 Q9H8N7 Zinc finger protein 395 ZNF395 sp|Q9H8N7|ZN395_HUMAN Zinc finger protein 395 OS=Homo sapiens GN=ZNF395 PE=1 SV=2 0.478776 0 7.79812E-05 121.34 105.25 121.34 S PSAACSLSPVRSRSLSFSEPQQPAPAMKSHL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.479)LS(0.479)FS(0.042)EPQQPAPAMK S(0)LS(0)FS(-10.52)EPQQPAPAMK 3 3 0.032229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3569 1960 449 449 3983 4246 4531 5037 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17505 4531 5037 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17505 4531 5037 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17505 Q9H8S9;Q7L9L4 38;38 Q9H8S9 Q9H8S9 MOB kinase activator 1A;MOB kinase activator 1B MOB1A;MOB1B sp|Q9H8S9|MOB1A_HUMAN MOB kinase activator 1A OS=Homo sapiens GN=MOB1A PE=1 SV=4;sp|Q7L9L4|MOB1B_HUMAN MOB kinase activator 1B OS=Homo sapiens GN=MOB1B PE=1 SV=3 0.99961 34.0852 6.53086E-07 139.74 110.08 139.74 1 S SHQYELLKHAEATLGSGNLRQAVMLPEGEDL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX HAEATLGS(1)GNLR HAEAT(-34.09)LGS(34.09)GNLR 8 2 0.080227 10454 0 0 12063 0 0 11092 0 0 10691 0 0 19714 0 0 11614 0 0 18731 0 0 13892 0 0 12242 0 0 5168.8 0 0 9894.4 0 0 11388 0 0 11236 0 0 11076 0 0 19477 0 0 11638 0 0 18936 0 0 14002 0 0 12354 0 0 5188.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6549200 6549200 0 0 NaN 3570 1961 38 38 1692 1784 1926 2145 1926 2145 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8792 1926 2145 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8792 1926 2145 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8792 Q9H8S9 2 Q9H8S9 Q9H8S9 MOB kinase activator 1A MOB1A sp|Q9H8S9|MOB1A_HUMAN MOB kinase activator 1A OS=Homo sapiens GN=MOB1A PE=1 SV=4 0.999999 60.042 0.00867011 79.146 70.132 79.146 1 S ______________MSFLFSSRSSKTFKPKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX S(1)FLFSSR S(60.04)FLFS(-60.04)S(-69.44)R 1 2 -0.58362 1553.3 0 0 636.83 0 0 1363.8 0 0 1056.7 0 0 1493.8 0 0 1704.6 0 0 1256.3 0 0 1433.4 0 0 1118.1 0 0 1743 0 0 1469.2 0 0 603.99 0 0 1385.3 0 0 1069.8 0 0 1504.7 0 0 1679.6 0 0 1286.4 0 0 1500.8 0 0 1109.1 0 0 1674.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 4330600 4330600 0 0 NaN 3571 1961 2 2 3747 3987 4251 4726 4251 4726 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22767 4251 4726 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22767 4251 4726 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22767 Q9H8W4 16 Q9H8W4 Q9H8W4 Pleckstrin homology domain-containing family F member 2 PLEKHF2 sp|Q9H8W4|PKHF2_HUMAN Pleckstrin homology domain-containing family F member 2 OS=Homo sapiens GN=PLEKHF2 PE=1 SV=1 1 127.759 2.76092E-11 182.82 168.13 182.82 1 S MVDRLANSEANTRRISIVENCFGAAGQPLTI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RIS(1)IVENCFGAAGQPLTIPGR RIS(127.76)IVENCFGAAGQPLT(-127.76)IPGR 3 3 -0.087582 4318.7 0 0 4383.5 0 0 4627.1 0 0 3733.2 0 0 5780.8 0 0 4979.6 0 0 6457.1 0 0 6474.5 0 0 4261 0 0 19053 0 0 4087.8 0 0 4137.2 0 0 4656.9 0 0 3892.8 0 0 5805.8 0 0 4990.3 0 0 6480.1 0 0 7010.5 0 0 4297.4 0 0 18090 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17128000 17128000 0 0 NaN 3572 1962 16 16 3281 3481 3718 4131 3718 4131 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20634 3718 4131 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20634 3718 4131 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20634 Q9H8Y5 675 Q9H8Y5 Q9H8Y5 Ankyrin repeat and zinc finger domain-containing protein 1 ANKZF1 sp|Q9H8Y5|ANKZ1_HUMAN Ankyrin repeat and zinc finger domain-containing protein 1 OS=Homo sapiens GN=ANKZF1 PE=1 SV=1 0.926837 11.0272 6.84328E-05 101.86 80.329 101.86 1 S LAAERRLAAQLGAPTSPIPDSAIVNTRRCWS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPPXXXX LAAQLGAPT(0.073)S(0.927)PIPDSAIVNTR LAAQLGAPT(-11.03)S(11.03)PIPDS(-59.69)AIVNT(-76.18)R 10 3 -0.56974 4361.2 0 0 4951.7 0 0 4853 0 0 4613.3 0 0 5954.4 0 0 4907.3 0 0 5491.1 0 0 5809.1 0 0 5397.7 0 0 41312 0 0 4128.7 0 0 4675.8 0 0 4871.1 0 0 4762.2 0 0 5970.9 0 0 4994.8 0 0 5609.2 0 0 7036.8 0 0 5329.8 0 0 39035 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11986000 11986000 0 0 NaN 3573 1963 675 675 2281 2410 2593 2898 2593 2898 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20216 2593 2898 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20216 2593 2898 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20216 Q9H8Y5 56 Q9H8Y5 Q9H8Y5 Ankyrin repeat and zinc finger domain-containing protein 1 ANKZF1 sp|Q9H8Y5|ANKZ1_HUMAN Ankyrin repeat and zinc finger domain-containing protein 1 OS=Homo sapiens GN=ANKZF1 PE=1 SV=1 1 83.8107 1.93278E-10 176.48 146.51 176.48 1 S ARAPRTSCSGSGERESPERKLLQGPMDISEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPXXXXXXXXXXX TSCSGSGERES(1)PERK T(-146.07)S(-143.34)CS(-127)GS(-83.81)GERES(83.81)PERK 11 4 -0.40123 3322.6 0 0 4701.8 0 0 3608.7 0 0 4563.9 0 0 3308.2 0 0 3801.4 0 0 3721.9 0 0 3681.6 0 0 5135.7 0 0 1467.2 0 0 3145.1 0 0 4440.9 0 0 3614.4 0 0 4682.2 0 0 3382.1 0 0 3845.6 0 0 3807.5 0 0 3741.8 0 0 5007.5 0 0 1466.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25640000 25640000 0 0 NaN 3574 1963 56 56 4907 5232 5575 6197 5575 6197 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5431 5575 6197 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5431 5575 6197 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5431 Q9H8Y5 533 Q9H8Y5 Q9H8Y5 Ankyrin repeat and zinc finger domain-containing protein 1 ANKZF1 sp|Q9H8Y5|ANKZ1_HUMAN Ankyrin repeat and zinc finger domain-containing protein 1 OS=Homo sapiens GN=ANKZF1 PE=1 SV=1 0.992586 23.5736 0.0115218 71.651 56.059 71.651 1 S PADPRVLSLLSAPLGSGGFTLLHAAAAAGRG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPPPPPPX VLSLLS(0.003)APLGS(0.993)GGFT(0.004)LLHAAAAAGR VLS(-40.73)LLS(-25.24)APLGS(23.57)GGFT(-23.57)LLHAAAAAGR 11 3 1.904 4286.1 0 0 3564.8 0 0 4052.5 0 0 5247.9 0 0 3576.8 0 0 3538 0 0 4880.9 0 0 6171.4 0 0 4600.3 0 0 43141 0 0 4054.8 0 0 3377.1 0 0 4090.7 0 0 5258.2 0 0 3676 0 0 3736.9 0 0 4898 0 0 7388.2 0 0 4551 0 0 40765 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13544000 13544000 0 0 NaN 3575 1963 533 533 5176 5515 5877 6531 5877 6531 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24090 5877 6531 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24090 5877 6531 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24090 Q9H8Y8 451 Q9H8Y8 Q9H8Y8 Golgi reassembly-stacking protein 2 GORASP2 sp|Q9H8Y8|GORS2_HUMAN Golgi reassembly-stacking protein 2 OS=Homo sapiens GN=GORASP2 PE=1 SV=3 0.9999 40 1.69436E-18 246.4 226.4 246.4 1 S SEKPVSAAVDANASESP______________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPXXXXXXXXXXXXXX VGDSTPVSEKPVSAAVDANASES(1)P VGDS(-191.93)T(-186.37)PVS(-174.17)EKPVS(-145.06)AAVDANAS(-40)ES(40)P 23 3 -0.073452 6611.1 0 0 23319 0 0 7386.3 0 0 25102 0 0 9082.5 0 0 6856.4 0 0 9442.6 0 0 14663 0 0 26838 0 0 15006 0 0 6258.7 0 0 22039 0 0 7414.4 0 0 25372 0 0 9138.3 0 0 7813.1 0 0 10071 0 0 14857 0 0 25743 0 0 14470 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 115810000 115810000 0 0 NaN 3576 1964 451 451 5111 5448 5802 6451 5802 6451 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15402 5802 6451 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15402 5802 6451 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15402 Q9H910 69 Q9H910 Q9H910 Hematological and neurological expressed 1-like protein HN1L sp|Q9H910|HN1L_HUMAN Hematological and neurological expressed 1-like protein OS=Homo sapiens GN=HN1L PE=1 SV=1 0.999366 32.1799 1.74276E-11 190.79 154.53 190.79 1 S PQNIPKRTNPPGGKGSGIFDESTPVQTRQHL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPPPXXX TNPPGGKGS(0.999)GIFDES(0.001)TPVQTR T(-71.65)NPPGGKGS(32.18)GIFDES(-32.18)T(-45.45)PVQT(-72.96)R 9 3 -0.30814 13031 0 0 35587 0 0 14525 0 0 37072 0 0 22968 0 0 15217 0 0 19698 0 0 24727 0 0 39078 0 0 21577 0 0 12336 0 0 33627 0 0 14637 0 0 37622 0 0 22782 0 0 16388 0 0 20739 0 0 25085 0 0 37737 0 0 20890 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 51818000 51818000 0 0 NaN 3577 1965 69 69 1611;3521;4808 1697;3738;5128 1833;5467 2039;6084 5467 6084 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14816 5467 6084 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14816 5467 6084 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14816 Q9H930 180 Q9H930 Q9H930 Nuclear body protein SP140-like protein SP140L sp|Q9H930|SP14L_HUMAN Nuclear body protein SP140-like protein OS=Homo sapiens GN=SP140L PE=2 SV=3 1 71.5134 0.0159923 71.513 45.954 71.513 1 S RPDIKLSLKQGEVPESPEARKESDQACGKMD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX QGEVPES(1)PEAR QGEVPES(71.51)PEAR 7 2 -1.3292 20539 0 0 12059 0 0 17393 0 0 13155 0 0 15175 0 0 19216 0 0 15278 0 0 16680 0 0 12222 0 0 4975.8 0 0 19424 0 0 11398 0 0 17667 0 0 13538 0 0 15530 0 0 18968 0 0 15463 0 0 16979 0 0 12189 0 0 5071.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6447600 6447600 0 0 NaN 3578 1966 180 180 3030 3212 3435 3808 3435 3808 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7637 3435 3808 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7637 3435 3808 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7637 Q9H9A7 284 Q9H9A7 Q9H9A7 RecQ-mediated genome instability protein 1 RMI1 sp|Q9H9A7|RMI1_HUMAN RecQ-mediated genome instability protein 1 OS=Homo sapiens GN=RMI1 PE=1 SV=3 0.957966 13.5775 9.81854E-07 142.4 118.11 142.4 1 S FTTGSSSNTIPTRQSSFEPEFVISPRPKEEP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX QS(0.042)S(0.958)FEPEFVISPR QS(-13.58)S(13.58)FEPEFVIS(-84.12)PR 3 2 -0.74307 9231.3 0 0 8039.4 0 0 8508.7 0 0 7991.4 0 0 10937 0 0 10086 0 0 11626 0 0 12038 0 0 8559.5 0 0 31720 0 0 8732.4 0 0 7594.3 0 0 8640.4 0 0 8241.9 0 0 10962 0 0 10100 0 0 11717 0 0 12955 0 0 8575.7 0 0 30147 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9723800 9723800 0 0 NaN 3579 1967 284 284 3146 3337 3568 3957 3568 3957 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20055 3568 3957 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20055 3568 3957 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20055 Q9H9C1 90 Q9H9C1 Q9H9C1 Spermatogenesis-defective protein 39 homolog VIPAS39 sp|Q9H9C1|SPE39_HUMAN Spermatogenesis-defective protein 39 homolog OS=Homo sapiens GN=VIPAS39 PE=1 SV=1 0.707665 3.91663 5.03973E-07 146.86 97.23 146.86 1 S AGNSGSTHEGREQLKSRNSFSSYAQLPKPTS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX S(0.708)RNS(0.287)FS(0.005)SYAQLPK S(3.92)RNS(-3.92)FS(-21.41)S(-43.85)Y(-80.85)AQLPK 1 3 0.87279 10457 0 0 9995.7 0 0 10788 0 0 8423.9 0 0 13624 0 0 9724.5 0 0 12905 0 0 11394 0 0 9909.4 0 0 6987 0 0 9895.8 0 0 9433.7 0 0 10878 0 0 8766.2 0 0 13645 0 0 9723.4 0 0 13089 0 0 11575 0 0 9904.7 0 0 6842.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21308000 21308000 0 0 NaN 3580 1968 90 90 4267 4546 4845 5377 4845 5377 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15553 4845 5377 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15553 4845 5377 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15553 Q9H9C1 121 Q9H9C1 Q9H9C1 Spermatogenesis-defective protein 39 homolog VIPAS39 sp|Q9H9C1|SPE39_HUMAN Spermatogenesis-defective protein 39 homolog OS=Homo sapiens GN=VIPAS39 PE=1 SV=1 0.994845 24.5482 1.74518E-23 281.75 243.02 281.75 1 S TYSLSSFFRGRTRPGSFQSLSDALSDTPAKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPX T(0.002)RPGS(0.995)FQS(0.003)LSDALSDTPAK T(-27.77)RPGS(24.55)FQS(-24.55)LS(-90.1)DALS(-148.6)DT(-179.88)PAK 5 3 0.29837 8945.5 0 0 10292 0 0 12019 0 0 9555.3 0 0 14837 0 0 10202 0 0 14579 0 0 14007 0 0 11681 0 0 12381 0 0 8476.3 0 0 9717.9 0 0 11959 0 0 9866.4 0 0 14884 0 0 10268 0 0 14773 0 0 14275 0 0 11648 0 0 11982 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 100840000 100840000 0 0 NaN 3581 1968 121 121 4895 5220 5561 6182 5561 6182 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18671 5561 6182 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18671 5561 6182 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18671 Q9H9J4 936 Q9H9J4 Q9H9J4 Ubiquitin carboxyl-terminal hydrolase 42 USP42 sp|Q9H9J4|UBP42_HUMAN Ubiquitin carboxyl-terminal hydrolase 42 OS=Homo sapiens GN=USP42 PE=1 SV=3 1 89.6786 0.00799808 89.679 59.905 89.679 1 S GERVEDAAAPKAPGPSPAKEKIGSLRKVDRG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX APGPS(1)PAK APGPS(89.68)PAK 5 2 0.47276 10827 0 0 20451 0 0 13620 0 0 18813 0 0 13365 0 0 13244 0 0 14133 0 0 15816 0 0 20758 0 0 5840.2 0 0 10256 0 0 19310 0 0 13552 0 0 19327 0 0 13595 0 0 13566 0 0 14531 0 0 15941 0 0 20201 0 0 5865.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8977500 8977500 0 0 NaN 3582 1969 936 936 354 380 412 455 412 455 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8289 412 455 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8289 412 455 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8289 Q9H9J4 1263 Q9H9J4 Q9H9J4 Ubiquitin carboxyl-terminal hydrolase 42 USP42 sp|Q9H9J4|UBP42_HUMAN Ubiquitin carboxyl-terminal hydrolase 42 OS=Homo sapiens GN=USP42 PE=1 SV=3 0.948343 15.6234 6.89972E-15 229.4 172.83 229.4 1 S EDFVKDSELHLPRVTSLETVAQFRRAQGGFP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX VT(0.026)S(0.948)LET(0.026)VAQFR VT(-15.62)S(15.62)LET(-15.67)VAQFR 3 2 -0.38444 8855.8 0 0 15697 0 0 8311.4 0 0 16026 0 0 14699 0 0 8943.4 0 0 13830 0 0 12241 0 0 16391 0 0 16944 0 0 8377.8 0 0 14831 0 0 8476.9 0 0 16321 0 0 14529 0 0 9353.8 0 0 14190 0 0 12661 0 0 16064 0 0 16238 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16910000 16910000 0 0 NaN 3583 1969 1263 1263 5298 5645 6017 6684 6017 6684 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19597 6017 6684 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19597 6017 6684 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19597 Q9HAH7 447 Q9HAH7 Q9HAH7 Probable fibrosin-1 FBRS sp|Q9HAH7|FBRS_HUMAN Probable fibrosin-1 OS=Homo sapiens GN=FBRS PE=1 SV=3 0.5 0 2.30853E-05 128.43 103.22 128.43 1 S ALLGAPPPLVPAPRPSSPPRGPGPARADR__ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX TPPGALLGAPPPLVPAPRPS(0.5)S(0.5)PPR T(-116.46)PPGALLGAPPPLVPAPRPS(0)S(0)PPR 20 3 -0.030402 5529.2 0 0 4676.1 0 0 5176.1 0 0 4627.4 0 0 4223.6 0 0 4505.5 0 0 5742.9 0 0 5250.2 0 0 5373.8 0 0 12569 0 0 5230.7 0 0 4417.1 0 0 5223.6 0 0 4752.2 0 0 4363.5 0 0 4554.6 0 0 5762.7 0 0 5616.2 0 0 5318 0 0 11957 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11002000 11002000 0 0 NaN 3584 1970 447 447 4832 5157 5496 6114 5496 6114 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20022 5496 6114 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20022 5496 6114 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20022 Q9HAH7 448 Q9HAH7 Q9HAH7 Probable fibrosin-1 FBRS sp|Q9HAH7|FBRS_HUMAN Probable fibrosin-1 OS=Homo sapiens GN=FBRS PE=1 SV=3 0.5 0 2.30853E-05 128.43 103.22 128.43 1 S LLGAPPPLVPAPRPSSPPRGPGPARADR___ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TPPGALLGAPPPLVPAPRPS(0.5)S(0.5)PPR T(-116.46)PPGALLGAPPPLVPAPRPS(0)S(0)PPR 21 3 -0.030402 5529.2 0 0 4676.1 0 0 5176.1 0 0 4627.4 0 0 4223.6 0 0 4505.5 0 0 5742.9 0 0 5250.2 0 0 5373.8 0 0 12569 0 0 5230.7 0 0 4417.1 0 0 5223.6 0 0 4752.2 0 0 4363.5 0 0 4554.6 0 0 5762.7 0 0 5616.2 0 0 5318 0 0 11957 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11002000 11002000 0 0 NaN 3585 1970 448 448 4832 5157 5496 6114 5496 6114 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20022 5496 6114 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20022 5496 6114 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20022 Q9HAH7 281 Q9HAH7 Q9HAH7 Probable fibrosin-1 FBRS sp|Q9HAH7|FBRS_HUMAN Probable fibrosin-1 OS=Homo sapiens GN=FBRS PE=1 SV=3 0.99986 38.5381 0.00142242 116.73 91.558 116.73 1 S EKDRDLPFSRPQLRVSPATPKARAGEEGPRP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPXXXXXXXXXX VS(1)PATPK VS(38.54)PAT(-38.54)PK 2 2 1.1501 24110 0 0 33827 0 0 22470 0 0 29762 0 0 26337 0 0 22604 0 0 27850 0 0 26975 0 0 34573 0 0 4877.2 0 0 22808 0 0 31932 0 0 22770 0 0 30692 0 0 26526 0 0 23041 0 0 28460 0 0 27035 0 0 33828 0 0 5216.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24263000 24263000 0 0 NaN 3586 1970 281 281 5259 5605 5975 6639 5975 6639 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9825 5975 6639 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9825 5975 6639 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9825 Q9HAP2 9 Q9HAP2 Q9HAP2 MLX-interacting protein MLXIP sp|Q9HAP2|MLXIP_HUMAN MLX-interacting protein OS=Homo sapiens GN=MLXIP PE=1 SV=2 1 60.4007 0.00158583 60.401 51.187 60.401 1 S _______MAADVFMCSPRRPRSRGRQVLLKP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX AADVFMCS(1)PR AADVFMCS(60.4)PR 8 2 0.29961 5825.5 0 0 5599.4 0 0 5017.6 0 0 6765.4 0 0 6070.4 0 0 5728.5 0 0 5841.9 0 0 6527.3 0 0 6828.7 0 0 5920.5 0 0 5509.3 0 0 5296.2 0 0 5111.3 0 0 6858.7 0 0 6095.8 0 0 5809.4 0 0 5984.6 0 0 6694.8 0 0 6696 0 0 5725.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5208300 5208300 0 0 NaN 3587 1971 9 9 21 23 26 34 26 34 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18120 26 34 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18120 26 34 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18120 Q9HAU0 855 Q9HAU0 Q9HAU0 Pleckstrin homology domain-containing family A member 5 PLEKHA5 sp|Q9HAU0|PKHA5_HUMAN Pleckstrin homology domain-containing family A member 5 OS=Homo sapiens GN=PLEKHA5 PE=1 SV=1 0.835763 7.26428 2.63598E-16 238.2 206.16 238.2 1 S KGSHFPVGVVPPRAKSPTPESSTIASYVTLR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP AKS(0.836)PT(0.157)PES(0.007)S(0.001)TIASYVTLR AKS(7.26)PT(-7.26)PES(-20.91)S(-31.86)T(-59.41)IAS(-91.18)Y(-151.04)VT(-131.73)LR 3 3 -0.62733 23475 0 0 34776 0 0 24089 0 0 34860 0 0 15334 0 0 25325 0 0 18585 0 0 28045 0 0 38170 0 0 18897 0 0 22216 0 0 32853 0 0 24120 0 0 35635 0 0 16142 0 0 25880 0 0 19298 0 0 28596 0 0 36831 0 0 18443 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 50920000 50920000 0 0 NaN 3588 1972 855 855 278 299 320 357 320 357 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18336 320 357 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18336 320 357 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18336 Q9HAU0 410 Q9HAU0 Q9HAU0 Pleckstrin homology domain-containing family A member 5 PLEKHA5 sp|Q9HAU0|PKHA5_HUMAN Pleckstrin homology domain-containing family A member 5 OS=Homo sapiens GN=PLEKHA5 PE=1 SV=1 0.785155 5.62831 2.61685E-07 151.73 122.4 151.73 1 S GPLYTEADRVIQRTNSMQQLEQWIKIQKGRG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX T(0.215)NS(0.785)MQQLEQWIK T(-5.63)NS(5.63)MQQLEQWIK 3 3 0.49621 6928.7 0 0 7012.6 0 0 6285.8 0 0 6617.3 0 0 5301.2 0 0 8483.6 0 0 4611 0 0 6830.7 0 0 7260 0 0 14336 0 0 6553.9 0 0 6622.3 0 0 6353 0 0 6848.6 0 0 5430.6 0 0 8426.5 0 0 4799.3 0 0 7347.7 0 0 7051.1 0 0 13657 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10159000 10159000 0 0 NaN 3589 1972 410 410 4813 5135 5474 6092 5474 6092 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23083 5474 6092 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23083 5474 6092 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23083 Q9HAW0 353 Q9HAW0 Q9HAW0 Transcription factor IIIB 50 kDa subunit BRF2 sp|Q9HAW0|BRF2_HUMAN Transcription factor IIIB 50 kDa subunit OS=Homo sapiens GN=BRF2 PE=1 SV=1 1 103.17 0.000183964 103.17 80.972 103.17 1 S VGNNSLGLPQGKRPASPALLLPPCMLKSPKR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPXXXX RPAS(1)PALLLPPCMLK RPAS(103.17)PALLLPPCMLK 4 3 -0.48031 6858.3 0 0 8105.6 0 0 7400.2 0 0 8144.6 0 0 5441.6 0 0 6147.6 0 0 5001.6 0 0 7972.7 0 0 8106.9 0 0 15533 0 0 6491.8 0 0 7657.3 0 0 7395.6 0 0 8328.2 0 0 5634.5 0 0 6303.3 0 0 5197.4 0 0 8394.5 0 0 7867.4 0 0 14810 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29000000 29000000 0 0 NaN 3590 1974 353 353 3375 3583 3823 4246 3823 4246 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22164 3823 4246 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22164 3823 4246 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22164 Q9HAW4 1289 Q9HAW4 Q9HAW4 Claspin CLSPN sp|Q9HAW4|CLSPN_HUMAN Claspin OS=Homo sapiens GN=CLSPN PE=1 SV=3 0.991391 20.6128 2.98746E-05 132.01 113.42 132.01 1 S PSAPRNSRNFVFHTLSPVKAEAAKESSKSQV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPXXXXXXX NFVFHT(0.009)LS(0.991)PVKAEAAK NFVFHT(-20.61)LS(20.61)PVKAEAAK 8 4 0.31069 14943 0 0 14817 0 0 13866 0 0 17092 0 0 10507 0 0 14252 0 0 8559.1 0 0 13949 0 0 16181 0 0 11424 0 0 14136 0 0 14010 0 0 13979 0 0 17365 0 0 10840 0 0 14430 0 0 9014.7 0 0 14348 0 0 15642 0 0 11080 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 40284000 40284000 0 0 NaN 3591 1975 1289 1289 2811;2812 2981;2982 3194;3195 3546;3547 3195 3547 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19397 3195 3547 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19397 3195 3547 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19397 Q9HAW4 808 Q9HAW4 Q9HAW4 Claspin CLSPN sp|Q9HAW4|CLSPN_HUMAN Claspin OS=Homo sapiens GN=CLSPN PE=1 SV=3 0.980407 16.9931 0.00106875 113.66 93.205 113.66 1 S TGRGTSFFPTAGGFRSPSPGLFRASLVSSAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX S(0.98)PS(0.02)PGLFR S(16.99)PS(-16.99)PGLFR 1 2 -0.043347 12759 0 0 22196 0 0 13101 0 0 22025 0 0 12205 0 0 12534 0 0 11377 0 0 16340 0 0 22512 0 0 4189.9 0 0 12075 0 0 20967 0 0 13160 0 0 22473 0 0 12438 0 0 13042 0 0 11925 0 0 16369 0 0 21740 0 0 4323.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 59259000 59259000 0 0 NaN 3592 1975 808 808 4186 4461 4754 5273 4754 5273 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15232 4754 5273 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15232 4754 5273 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15232 Q9HB19 401 Q9HB19 Q9HB19 Pleckstrin homology domain-containing family A member 2 PLEKHA2 sp|Q9HB19|PKHA2_HUMAN Pleckstrin homology domain-containing family A member 2 OS=Homo sapiens GN=PLEKHA2 PE=1 SV=2 1 68.034 0.0128265 68.034 47.081 68.034 1 S GAPPGVLPSSRIRHRSEPQHPKEKPFMFNLD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX HRS(1)EPQHPK HRS(68.03)EPQHPK 3 4 -0.056757 8692.2 0 0 7907.6 0 0 8895.1 0 0 8033.3 0 0 16315 0 0 8922.8 0 0 15493 0 0 11898 0 0 7979.1 0 0 10026 0 0 8225.8 0 0 7470.7 0 0 9034.5 0 0 8255 0 0 16099 0 0 8960.2 0 0 15605 0 0 12122 0 0 8191.7 0 0 9715.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8448100 8448100 0 0 NaN 3593 1976 401 401 1741 1836 1982 2209 1982 2209 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4799 1982 2209 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4799 1982 2209 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4799 Q9HB19 314 Q9HB19 Q9HB19 Pleckstrin homology domain-containing family A member 2 PLEKHA2 sp|Q9HB19|PKHA2_HUMAN Pleckstrin homology domain-containing family A member 2 OS=Homo sapiens GN=PLEKHA2 PE=1 SV=2 0.979201 16.9676 4.78793E-05 112.62 94.52 112.62 1 S ALKCHPRETSFSRSISLTRPGSSSLSSGPNS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.02)IS(0.979)LT(0.001)RPGSSSLSSGPNSILCR S(-16.97)IS(16.97)LT(-29.46)RPGS(-54)S(-57.46)S(-66.95)LS(-77.85)S(-87.68)GPNS(-90.92)ILCR 3 3 -0.64999 8218 0 0 8783.4 0 0 7748 0 0 9945.4 0 0 14807 0 0 9354 0 0 20151 0 0 14179 0 0 9146.1 0 0 15875 0 0 7774.5 0 0 8304 0 0 7925.4 0 0 10131 0 0 14675 0 0 9492.8 0 0 19954 0 0 14514 0 0 9491.2 0 0 15276 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 67497000 67497000 0 0 NaN 3594 1976 314 314 3867 4120 4396 4890 4396 4890 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17721 4396 4890 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17721 4396 4890 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17721 Q9HB90;Q9NQL2 95;96 Q9HB90 Q9HB90 Ras-related GTP-binding protein C;Ras-related GTP-binding protein D RRAGC;RRAGD sp|Q9HB90|RRAGC_HUMAN Ras-related GTP-binding protein C OS=Homo sapiens GN=RRAGC PE=1 SV=1;sp|Q9NQL2|RRAGD_HUMAN Ras-related GTP-binding protein D OS=Homo sapiens GN=RRAGD PE=1 SV=1 0.879475 8.63145 0.000155823 107.72 89.828 107.72 1 S VVFHKMSPNETLFLESTNKIYKDDISNSSFV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPXXXXXXXXXXXX MSPNETLFLES(0.879)T(0.121)NK MS(-84.39)PNET(-82.83)LFLES(8.63)T(-8.63)NK 11 3 -1.9036 3877.7 0 0 5579.8 0 0 4776.8 0 0 5821.5 0 0 5974.9 0 0 4046.5 0 0 6793.6 0 0 6170.7 0 0 6519.1 0 0 11364 0 0 3672.7 0 0 5272.4 0 0 4774.5 0 0 5934.1 0 0 6003.9 0 0 4183.3 0 0 6868.4 0 0 6449.8 0 0 6444.1 0 0 10843 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7451800 7451800 0 0 NaN 3595 1978 95 95 2746 2912 3122 3469 3122 3469 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20064 3122 3469 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20064 3122 3469 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20064 Q9HB90 2 Q9HB90 Q9HB90 Ras-related GTP-binding protein C RRAGC sp|Q9HB90|RRAGC_HUMAN Ras-related GTP-binding protein C OS=Homo sapiens GN=RRAGC PE=1 SV=1 0.525502 2.74984 0.0101552 46.273 35.615 46.273 1 S ______________MSLQYGAEETPLAGSYG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.526)LQY(0.186)GAEET(0.279)PLAGS(0.005)Y(0.005)GAADSFPK S(2.75)LQY(-4.51)GAEET(-2.75)PLAGS(-20.6)Y(-20.34)GAADS(-39.71)FPK 1 3 2.4674 3291 0 0 5177 0 0 3723.7 0 0 5253.5 0 0 7947.8 0 0 3942.6 0 0 9266.3 0 0 6867.2 0 0 4632.5 0 0 24219 0 0 3115.7 0 0 4890.9 0 0 3778.9 0 0 5368.4 0 0 7830.3 0 0 4092.6 0 0 9242 0 0 7504.8 0 0 4767.4 0 0 22964 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12675000 12675000 0 0 NaN 3596 1978 2 2 3974 4234 4518 5021 4518 5021 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22281 4518 5021 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22281 4518 5021 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22281 Q9HBL0 1177 Q9HBL0 Q9HBL0 Tensin-1 TNS1 sp|Q9HBL0|TENS1_HUMAN Tensin-1 OS=Homo sapiens GN=TNS1 PE=1 SV=2 0.99752 26.0456 4.42228E-05 115.02 76.297 115.02 1 S ARAQFSVAGVHTVPGSPQARHRTVGTNTPPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPXXXXXXXXXXX AQFSVAGVHT(0.002)VPGS(0.998)PQAR AQFS(-65.94)VAGVHT(-26.05)VPGS(26.05)PQAR 14 3 0.3826 7435.5 0 0 7423.9 0 0 6833.2 0 0 7754.7 0 0 7507.4 0 0 7419.5 0 0 7928.2 0 0 6796.5 0 0 8844.3 0 0 5446.3 0 0 7033.7 0 0 7015 0 0 6924.3 0 0 7936.7 0 0 7585.5 0 0 7454.4 0 0 8075.1 0 0 7005.7 0 0 8687.8 0 0 5285.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10553000 10553000 0 0 NaN 3597 1980 1177 1177 391 418 453 502 453 502 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14288 453 502 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14288 453 502 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14288 Q9HC35 146 Q9HC35 Q9HC35 Echinoderm microtubule-associated protein-like 4 EML4 sp|Q9HC35|EMAL4_HUMAN Echinoderm microtubule-associated protein-like 4 OS=Homo sapiens GN=EML4 PE=1 SV=3 0.811913 6.35161 3.15165E-05 129.89 115.2 129.89 1 S ESHSNDQSPQIRASPSPQPSSQPLQIHRQTP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPXXX AS(0.188)PS(0.812)PQPSSQPLQIHR AS(-6.35)PS(6.35)PQPS(-52.76)S(-68.96)QPLQIHR 4 3 -2.1727 14568 0 0 19386 0 0 15561 0 0 17078 0 0 23468 0 0 18177 0 0 26430 0 0 18407 0 0 17107 0 0 8600.4 0 0 13788 0 0 18300 0 0 15714 0 0 17693 0 0 23381 0 0 18190 0 0 26506 0 0 18714 0 0 17275 0 0 8524.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20600000 20600000 0 0 NaN 3598 1981 146 146 488 519 558 623 558 623 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10213 558 623 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10213 558 623 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10213 Q9HC35 176 Q9HC35 Q9HC35 Echinoderm microtubule-associated protein-like 4 EML4 sp|Q9HC35|EMAL4_HUMAN Echinoderm microtubule-associated protein-like 4 OS=Homo sapiens GN=EML4 PE=1 SV=3 1 52.1672 0.0539079 52.167 16.287 52.167 1 S PESKNATPTKSIKRPSPAEKSHNSWENSDDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX RPS(1)PAEK RPS(52.17)PAEK 3 2 -0.49766 8657.2 0 0 10610 0 0 8311.2 0 0 10059 0 0 8270.6 0 0 9082.4 0 0 9952.9 0 0 8347.6 0 0 9676 0 0 2748.7 0 0 8190.6 0 0 10020 0 0 8391.5 0 0 10346 0 0 8419 0 0 9143.3 0 0 10043 0 0 8484.5 0 0 9559 0 0 2781.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5362400 5362400 0 0 NaN 3599 1981 176 176 3408 3620 3861 4286 3861 4286 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6375 3861 4286 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6375 3861 4286 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6375 Q9HC44 76 Q9HC44 Q9HC44 Vasculin-like protein 1 GPBP1L1 sp|Q9HC44|GPBL1_HUMAN Vasculin-like protein 1 OS=Homo sapiens GN=GPBP1L1 PE=1 SV=1 0.999874 38.995 0.000201551 110.8 105.31 110.8 1 S TAGDSWHQPSLFRHDSVDSGVSKGAYAGITG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX HDS(1)VDSGVSK HDS(38.99)VDS(-38.99)GVS(-98.66)K 3 3 -0.32246 8787.6 0 0 10147 0 0 10160 0 0 10318 0 0 9103.2 0 0 11335 0 0 9148.1 0 0 10282 0 0 11108 0 0 3640.9 0 0 8320.4 0 0 9586.1 0 0 10139 0 0 10600 0 0 9302.8 0 0 11310 0 0 9363.5 0 0 10464 0 0 10878 0 0 3666.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10187000 10187000 0 0 NaN 3600 1982 76 76 1704 1797 1941 2163 1941 2163 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7638 1941 2163 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7638 1941 2163 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7638 Q9HC44 49 Q9HC44 Q9HC44 Vasculin-like protein 1 GPBP1L1 sp|Q9HC44|GPBL1_HUMAN Vasculin-like protein 1 OS=Homo sapiens GN=GPBP1L1 PE=1 SV=1 0.997699 26.3717 5.78253E-11 202.81 190.14 202.81 1 S PRGEGRFGVSRRRHNSSDGFFNNGPLRTAGD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX HNS(0.998)S(0.002)DGFFNNGPLR HNS(26.37)S(-26.37)DGFFNNGPLR 3 3 0.49559 4371.2 0 0 4522.2 0 0 4588 0 0 5100.3 0 0 4945.8 0 0 4489.8 0 0 6205.1 0 0 4993.9 0 0 5213.3 0 0 3772.1 0 0 4137 0 0 4275.2 0 0 4614.1 0 0 5191.7 0 0 5014.7 0 0 4541 0 0 6228.6 0 0 5103.4 0 0 5186.1 0 0 3667.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14328000 14328000 0 0 NaN 3601 1982 49 49 1732 1826 1971 2197 1971 2197 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15595 1971 2197 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15595 1971 2197 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15595 Q9HC52 191 Q9HC52 Q9HC52 Chromobox protein homolog 8 CBX8 sp|Q9HC52|CBX8_HUMAN Chromobox protein homolog 8 OS=Homo sapiens GN=CBX8 PE=1 SV=3 0.984327 17.99 3.48152E-07 155.88 111.68 155.88 1 S RERERGTSRVDDKPSSPGDSSKKRGPKPRKE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPXXXXXXXXX VDDKPS(0.016)S(0.984)PGDSSK VDDKPS(-17.99)S(17.99)PGDS(-45.14)S(-52)K 7 3 -0.04457 35775 0 0 28895 0 0 37119 0 0 28388 0 0 26597 0 0 39220 0 0 26065 0 0 34065 0 0 28749 0 0 17133 0 0 33858 0 0 27293 0 0 37169 0 0 29353 0 0 27607 0 0 38796 0 0 26631 0 0 34885 0 0 28253 0 0 16921 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 43469000 43469000 0 0 NaN 3602 1983 191 191 5065 5399 5751 6390 5751 6390 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9211 5751 6390 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9211 5751 6390 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9211 Q9HC77 260 Q9HC77 Q9HC77 Centromere protein J CENPJ sp|Q9HC77|CENPJ_HUMAN Centromere protein J OS=Homo sapiens GN=CENPJ PE=1 SV=2 0.978974 16.6812 1.85011E-07 147.28 127.03 147.28 1 S CRTAHGDFVLTSKRASPNLFSEAQYQEAPVE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RAS(0.979)PNLFS(0.021)EAQYQEAPVEK RAS(16.68)PNLFS(-16.68)EAQY(-53)QEAPVEK 3 3 1.1625 19942 0 0 23621 0 0 19940 0 0 23049 0 0 17922 0 0 20683 0 0 18366 0 0 22656 0 0 24354 0 0 64580 0 0 18871 0 0 22311 0 0 20055 0 0 23663 0 0 18319 0 0 20983 0 0 18837 0 0 24595 0 0 23776 0 0 61334 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 22453000 22453000 0 0 NaN 3603 1984 260 260 3194 3388 3621 4016;4017 3621 4016 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17224 3621 4016 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17224 3621 4016 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17224 Q9HCD5 29 Q9HCD5 Q9HCD5 Nuclear receptor coactivator 5 NCOA5 sp|Q9HCD5|NCOA5_HUMAN Nuclear receptor coactivator 5 OS=Homo sapiens GN=NCOA5 PE=1 SV=2 1 52.2654 0.0254924 52.265 34.898 52.265 2 S DPYGFGDSRDSRRDRSPIRGSPRREPRDGRN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX DRS(1)PIRGS(1)PR DRS(52.27)PIRGS(52.27)PR 3 2 -0.70627 0 2543.4 0 0 1754.3 0 0 3082.4 0 0 2062.8 0 0 1645.9 0 0 2427.1 0 0 2044.7 0 0 1472.6 0 0 1924.6 0 0 1859.1 0 0 2408.7 0 0 1659 0 0 3056 0 0 2105.1 0 0 1760.6 0 0 2408.1 0 0 2058.9 0 0 1570.1 0 0 1904.1 0 0 1784.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 2674700 0 2674700 0 NaN 3604 1985 29 29 793 841 897 988 897 988 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5434 897 988 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5434 897 988 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5434 Q9HCD5 34 Q9HCD5 Q9HCD5 Nuclear receptor coactivator 5 NCOA5 sp|Q9HCD5|NCOA5_HUMAN Nuclear receptor coactivator 5 OS=Homo sapiens GN=NCOA5 PE=1 SV=2 1 52.2654 0.0254924 52.265 34.898 52.265 2 S GDSRDSRRDRSPIRGSPRREPRDGRNGRDAR X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX DRS(1)PIRGS(1)PR DRS(52.27)PIRGS(52.27)PR 8 2 -0.70627 0 2543.4 0 0 1754.3 0 0 3082.4 0 0 2062.8 0 0 1645.9 0 0 2427.1 0 0 2044.7 0 0 1472.6 0 0 1924.6 0 0 1859.1 0 0 2408.7 0 0 1659 0 0 3056 0 0 2105.1 0 0 1760.6 0 0 2408.1 0 0 2058.9 0 0 1570.1 0 0 1904.1 0 0 1784.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 2674700 0 2674700 0 NaN 3605 1985 34 34 793 841 897 988 897 988 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5434 897 988 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5434 897 988 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5434 Q9HCD5 9 Q9HCD5 Q9HCD5 Nuclear receptor coactivator 5 NCOA5 sp|Q9HCD5|NCOA5_HUMAN Nuclear receptor coactivator 5 OS=Homo sapiens GN=NCOA5 PE=1 SV=2 0.804424 6.29462 5.12137E-07 99.498 86.12 99.498 1 S _______MNTAPSRPSPTRRDPYGFGDSRDS X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPXXXXXXXXXXXX MNTAPS(0.189)RPS(0.804)PT(0.007)R MNT(-52.85)APS(-6.29)RPS(6.29)PT(-20.75)R 9 2 -0.093586 1095.2 0 0 650.7 0 0 359.54 0 0 441.43 0 0 1131.3 0 0 591.51 0 0 1161.5 0 0 864.15 0 0 407.08 0 0 2075.1 0 0 1033.6 0 0 613.5 0 0 413.83 0 0 468.43 0 0 1102.2 0 0 593.53 0 0 1160.2 0 0 918.77 0 0 433.66 0 0 1973.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20290000 20290000 0 0 NaN 3606 1985 9 9 2720 2886 3095 3442 3095 3442 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5547 3095 3442 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5547 3095 3442 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5547 Q9HCD5 377 Q9HCD5 Q9HCD5 Nuclear receptor coactivator 5 NCOA5 sp|Q9HCD5|NCOA5_HUMAN Nuclear receptor coactivator 5 OS=Homo sapiens GN=NCOA5 PE=1 SV=2 0.968897 14.9729 3.19639E-16 236.5 192.29 236.5 1 S KIINYLRERKERLMRSSTDSLPGPISRQPLG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(0.969)S(0.031)TDSLPGPISR S(14.97)S(-14.97)T(-35.52)DS(-66.51)LPGPIS(-184.93)R 1 2 0.19631 16368 0 0 21449 0 0 19262 0 0 20411 0 0 18309 0 0 19523 0 0 17415 0 0 21963 0 0 23092 0 0 22615 0 0 15499 0 0 20256 0 0 19216 0 0 21007 0 0 18629 0 0 19682 0 0 17925 0 0 22617 0 0 22544 0 0 21803 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25369000 25369000 0 0 NaN 3607 1985 377 377 4478 4770 5077 5634 5077 5634 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13141 5077 5634 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13141 5077 5634 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13141 Q9HCG8 829 Q9HCG8 Q9HCG8 Pre-mRNA-splicing factor CWC22 homolog CWC22 sp|Q9HCG8|CWC22_HUMAN Pre-mRNA-splicing factor CWC22 homolog OS=Homo sapiens GN=CWC22 PE=1 SV=3 0.999823 37.5165 3.28978E-15 249.04 210.24 249.04 1 S NKHGDPKKKRGERRNSFSENEKHTHRIKDSE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX RNS(1)FSENEK RNS(37.52)FS(-37.52)ENEK 3 3 0.19251 34143 0 0 33621 0 0 33568 0 0 30373 0 0 28656 0 0 34508 0 0 25970 0 0 30234 0 0 33948 0 0 2895.7 0 0 32306 0 0 31742 0 0 33769 0 0 31451 0 0 29340 0 0 34356 0 0 26782 0 0 30579 0 0 33158 0 0 3426.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 384170000 384170000 0 0 NaN 3608 1986 829 829 3359 3562 3800 4218 3800 4218 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7895 3800 4218 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7895 3800 4218 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7895 Q9HCH0 473 Q9HCH0 Q9HCH0 Nck-associated protein 5-like NCKAP5L sp|Q9HCH0|NCK5L_HUMAN Nck-associated protein 5-like OS=Homo sapiens GN=NCKAP5L PE=1 SV=2 1 81.3183 0.000117654 112.43 89.544 112.43 1 S PPTSEKSPSPGGPQLSPQLPRNSRIPCRNSG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPXXXXXXXXXX SPSPGGPQLS(1)PQLPR S(-81.32)PS(-81.32)PGGPQLS(81.32)PQLPR 10 3 0.072115 5792.9 0 0 5843.4 0 0 5356.5 0 0 6111.3 0 0 5191.1 0 0 5133.6 0 0 5448.7 0 0 5512.1 0 0 6268 0 0 2941.9 0 0 5479.9 0 0 5521.6 0 0 5417.2 0 0 6242.8 0 0 5282.1 0 0 5199.6 0 0 5556.4 0 0 5603 0 0 6149.9 0 0 2897.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10474000 10474000 0 0 NaN 3609 1987 473 473 4185 4460 4753 5272 4753 5272 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14428 4753 5272 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14428 4753 5272 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14428 Q9HCI7 211 Q9HCI7 Q9HCI7 E3 ubiquitin-protein ligase MSL2 MSL2 sp|Q9HCI7|MSL2_HUMAN E3 ubiquitin-protein ligase MSL2 OS=Homo sapiens GN=MSL2 PE=1 SV=2 0.998625 28.6355 2.70401E-12 181.62 141.11 181.62 1 S TYNGLSIDRFGINIPSPEHSNTIDVCNTVDI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPPPP FGINIPS(0.999)PEHS(0.001)NTIDVCNTVDIK FGINIPS(28.64)PEHS(-28.64)NT(-50.84)IDVCNT(-125.57)VDIK 7 4 -1.1256 4546.2 0 0 3515 0 0 4304.9 0 0 3862.8 0 0 3514.4 0 0 4303.8 0 0 4038.4 0 0 5221 0 0 3869.7 0 0 19337 0 0 4300.9 0 0 3322.5 0 0 4340 0 0 3952.1 0 0 3620.4 0 0 4342.2 0 0 4081 0 0 5784.1 0 0 3825.4 0 0 18329 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9045300 9045300 0 0 NaN 3610 1988 211 211 1265 1331 1433 1590 1433 1590 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21962 1433 1590 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21962 1433 1590 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21962 Q9HCI7 345 Q9HCI7 Q9HCI7 E3 ubiquitin-protein ligase MSL2 MSL2 sp|Q9HCI7|MSL2_HUMAN E3 ubiquitin-protein ligase MSL2 OS=Homo sapiens GN=MSL2 PE=1 SV=2 0.996327 27.5059 0.00121093 100.04 65.345 100.04 1 S AATPKIAKLNRKRSRSESDSEKVQPLPISTI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX S(0.002)RS(0.996)ES(0.002)DSEK S(-27.51)RS(27.51)ES(-27.51)DS(-38.69)EK 3 2 0.59782 6099.3 0 0 2793.3 0 0 6274.4 0 0 2932.5 0 0 2505 0 0 5520 0 0 3964.2 0 0 4501.1 0 0 3616.3 0 0 1487.2 0 0 5772.1 0 0 2639.5 0 0 6264.5 0 0 3044.1 0 0 2784.9 0 0 5407.5 0 0 3955.6 0 0 4599.2 0 0 3583 0 0 1504.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 2802100 2802100 0 0 NaN 3611 1988 345 345 4278 4558 4858 5390 4858 5390 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5395 4858 5390 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5395 4858 5390 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5395 Q9HCK8 2519 Q9HCK8 Q9HCK8 Chromodomain-helicase-DNA-binding protein 8 CHD8 sp|Q9HCK8|CHD8_HUMAN Chromodomain-helicase-DNA-binding protein 8 OS=Homo sapiens GN=CHD8 PE=1 SV=5 0.98038 17.3187 0.00709186 82.189 63.825 82.189 1 S HHHHHPGLRAPGYPSSPVTTASGTTLRLPPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPXXXX APGYPS(0.018)S(0.98)PVT(0.001)TASGTTLR APGY(-52.04)PS(-17.32)S(17.32)PVT(-29.92)T(-35.38)AS(-39.36)GT(-47.02)T(-47.02)LR 7 3 0.59196 10980 0 0 10452 0 0 11825 0 0 9615.4 0 0 12270 0 0 12050 0 0 14128 0 0 11285 0 0 10235 0 0 5850.4 0 0 10393 0 0 9868.7 0 0 11868 0 0 9963 0 0 12448 0 0 11971 0 0 14185 0 0 11526 0 0 10264 0 0 5770.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21625000 21625000 0 0 NaN 3612 1989 2519 2519 356 382 414 457 414 457 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13900 414 457 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13900 414 457 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13900 Q9HCK8 2220 Q9HCK8 Q9HCK8 Chromodomain-helicase-DNA-binding protein 8 CHD8 sp|Q9HCK8|CHD8_HUMAN Chromodomain-helicase-DNA-binding protein 8 OS=Homo sapiens GN=CHD8 PE=1 SV=5 0.346668 0.587517 0.00442502 90.534 73.849 90.534 S PGEYGDSPVPTPRSSSAASMAEEEASAVSTA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.303)S(0.303)S(0.347)AAS(0.048)MAEEEASAVSTAAAQFTK S(-0.59)S(-0.59)S(0.59)AAS(-8.61)MAEEEAS(-54.59)AVS(-65.51)T(-65.13)AAAQFT(-88.09)K 3 3 2.3752 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3613 1989 2220 2220 4412 4700 5004 5552 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23084 5004 5552 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23084 5004 5552 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23084 Q9HCK8 1995 Q9HCK8 Q9HCK8 Chromodomain-helicase-DNA-binding protein 8 CHD8 sp|Q9HCK8|CHD8_HUMAN Chromodomain-helicase-DNA-binding protein 8 OS=Homo sapiens GN=CHD8 PE=1 SV=5 0.950182 12.8042 3.68126E-06 138.03 120.11 138.03 1 S CSTPLLHQQYTSRTASPLPLRPDAPVEKSPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX T(0.05)AS(0.95)PLPLRPDAPVEK T(-12.8)AS(12.8)PLPLRPDAPVEK 3 3 -0.37739 31987 0 0 24051 0 0 35998 0 0 26829 0 0 18700 0 0 37874 0 0 19813 0 0 29096 0 0 27689 0 0 8121.5 0 0 30283 0 0 22736 0 0 35807 0 0 27555 0 0 20021 0 0 37375 0 0 20330 0 0 29771 0 0 26986 0 0 8320.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 75221000 75221000 0 0 NaN 3614 1989 1995 1995 4635 4944 5266 5849 5266 5849 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15860 5266 5849 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15860 5266 5849 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15860 Q9HCM7 937 Q9HCM7 Q9HCM7 Fibrosin-1-like protein FBRSL1 sp|Q9HCM7|FBSL_HUMAN Fibrosin-1-like protein OS=Homo sapiens GN=FBRSL1 PE=1 SV=4 0.993804 22.0516 0.0395865 43.297 15 43.297 1 S EPPERPYRDREPHGYSPERLRGELERARAPH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX DREPHGY(0.006)S(0.994)PER DREPHGY(-22.05)S(22.05)PER 8 3 -0.29893 5388.2 0 0 3596.8 0 0 6209.7 0 0 3174.9 0 0 3516.6 0 0 7239.3 0 0 4591 0 0 4270.3 0 0 3652.6 0 0 2236.2 0 0 5101.7 0 0 3395.4 0 0 6174.6 0 0 3350.9 0 0 3742 0 0 7041.9 0 0 4596 0 0 4465.9 0 0 3643.9 0 0 2204.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7122900 7122900 0 0 NaN 3615 1990 937 937 785 833 889 980 889 980 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5771 889 980 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5771 889 980 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5771 Q9HCS7 851 Q9HCS7 Q9HCS7 Pre-mRNA-splicing factor SYF1 XAB2 sp|Q9HCS7|SYF1_HUMAN Pre-mRNA-splicing factor SYF1 OS=Homo sapiens GN=XAB2 PE=1 SV=2 1 78.8425 1.96176E-05 131.33 110.96 131.33 1 S EVRLEQQSVPAAVFGSLKED___________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPXXXXXXXXXXX LEQQSVPAAVFGS(1)LKED LEQQS(-78.84)VPAAVFGS(78.84)LKED 13 3 -0.26445 5637.7 0 0 5054.7 0 0 5612.6 0 0 5013.9 0 0 13047 0 0 6537.7 0 0 13822 0 0 9627.2 0 0 5136.3 0 0 36377 0 0 5334.6 0 0 4774.7 0 0 5745.5 0 0 5175.1 0 0 12804 0 0 6592.3 0 0 13795 0 0 10633 0 0 5436.4 0 0 34476 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 44603000 44603000 0 0 NaN 3616 1991 851 851 2338 2471 2660 2972 2660 2972 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21340 2660 2972 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21340 2660 2972 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21340 Q9HCU9 237 Q9HCU9 Q9HCU9 Breast cancer metastasis-suppressor 1 BRMS1 sp|Q9HCU9|BRMS1_HUMAN Breast cancer metastasis-suppressor 1 OS=Homo sapiens GN=BRMS1 PE=1 SV=1 1 106.618 0.000942214 106.62 59.8 106.62 1 S ILEDWTAIKKARAAVSPQKRKSDGP______ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX AAVS(1)PQKR AAVS(106.62)PQKR 4 3 0.0023056 72947 0 0 61721 0 0 70866 0 0 60517 0 0 63382 0 0 79367 0 0 58540 0 0 75096 0 0 70829 0 0 10007 0 0 69019 0 0 58299 0 0 71377 0 0 62513 0 0 64705 0 0 78678 0 0 60158 0 0 75794 0 0 69366 0 0 11160 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 86507000 86507000 0 0 NaN 3617 1992 237 237 87;88 93;94 101;102 114;115 102 115 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6691 102 115 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6691 102 115 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6691 Q9HD20 899 Q9HD20 Q9HD20 Manganese-transporting ATPase 13A1 ATP13A1 sp|Q9HD20|AT131_HUMAN Manganese-transporting ATPase 13A1 OS=Homo sapiens GN=ATP13A1 PE=1 SV=2 0.999881 39.2363 4.10991E-10 189.8 160.41 189.8 1 S NAPERVVERRRRPRDSPTLSNSGIRATSRTA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPXXXXXX DS(1)PTLSNSGIR DS(39.24)PT(-39.24)LS(-91.63)NS(-95.26)GIR 2 2 0.66864 26494 0 0 22516 0 0 26631 0 0 25522 0 0 25569 0 0 31409 0 0 24647 0 0 25843 0 0 22611 0 0 8481.8 0 0 25071 0 0 21287 0 0 26793 0 0 26116 0 0 25995 0 0 31166 0 0 25077 0 0 26394 0 0 22397 0 0 8584.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14131000 14131000 0 0 NaN 3618 1993 899 899 817 865 921 1016 921 1016 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10622 921 1016 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10622 921 1016 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10622 Q9NP64 114 Q9NP64 Q9NP64 Nucleolar protein of 40 kDa ZCCHC17 sp|Q9NP64|NO40_HUMAN Nucleolar protein of 40 kDa OS=Homo sapiens GN=ZCCHC17 PE=1 SV=1 0.999996 55.9297 0.000216612 119.21 83.799 119.21 1 S DPNNVIIEQEERRRRSFQDYTGQKITLEAVL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(1)FQDYTGQK S(55.93)FQDY(-55.93)T(-58.91)GQK 1 3 -1.6778 7463.8 0 0 11458 0 0 9177.5 0 0 10015 0 0 14868 0 0 9051.8 0 0 15607 0 0 11502 0 0 12475 0 0 1377.4 0 0 7069.1 0 0 10816 0 0 9213.7 0 0 10356 0 0 14759 0 0 9149.4 0 0 15765 0 0 11484 0 0 12442 0 0 1563.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8405400 8405400 0 0 NaN 3619 1994 114 114 3753 3993 4257 4732 4257 4732 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13859 4257 4732 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13859 4257 4732 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13859 Q9NP66 105 Q9NP66 Q9NP66 High mobility group protein 20A HMG20A sp|Q9NP66|HM20A_HUMAN High mobility group protein 20A OS=Homo sapiens GN=HMG20A PE=1 SV=1 0.997666 26.3172 3.64412E-11 206.63 179.29 206.63 1 S GRKRKKPLRDSNAPKSPLTGYVRFMNERREQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPXXXXXXXX DSNAPKS(0.998)PLT(0.002)GYVR DS(-53.73)NAPKS(26.32)PLT(-26.32)GY(-100.34)VR 7 3 -0.28558 69783 0 0 127650 0 0 71106 0 0 124670 0 0 115310 0 0 68167 0 0 125990 0 0 106890 0 0 138980 0 0 17647 0 0 66038 0 0 120570 0 0 72085 0 0 127280 0 0 114570 0 0 71368 0 0 128090 0 0 106250 0 0 136580 0 0 19090 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 192350000 192350000 0 0 NaN 3620 1995 105 105 815 863 919 1013;1014 919 1014 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13303 919 1014 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13303 919 1014 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13303 Q9NPF5 454 Q9NPF5 Q9NPF5 DNA methyltransferase 1-associated protein 1 DMAP1 sp|Q9NPF5|DMAP1_HUMAN DNA methyltransferase 1-associated protein 1 OS=Homo sapiens GN=DMAP1 PE=1 SV=1 0.99176 20.8364 0.000225936 104.21 68.792 104.21 1 S VVGAPLTPNSRKRRESASSSSSVKKAKKP__ X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX RRES(0.992)AS(0.008)SSSSVK RRES(20.84)AS(-20.84)S(-42.24)S(-63.12)S(-68.73)S(-70.9)VK 4 3 -0.44498 3785.8 0 0 3902.5 0 0 4016.4 0 0 3792.7 0 0 3428.6 0 0 4737.3 0 0 4191 0 0 4072.7 0 0 4016 0 0 3219 0 0 3583.2 0 0 3686 0 0 4025.2 0 0 3916.1 0 0 3524.7 0 0 4704 0 0 4224.7 0 0 4208 0 0 3970 0 0 3125.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5720800 5720800 0 0 NaN 3621 1996 454 454 3433 3646 3888 4316 3888 4316 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5359 3888 4316 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5359 3888 4316 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5359 Q9NPH3 556 Q9NPH3 Q9NPH3 Interleukin-1 receptor accessory protein IL1RAP sp|Q9NPH3|IL1AP_HUMAN Interleukin-1 receptor accessory protein OS=Homo sapiens GN=IL1RAP PE=1 SV=2 0.344984 0 2.00304E-10 180.16 120.44 180.16 S QLQVAMPVKKSPRRSSSDEQGLSYSSLKNV_ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX RS(0.31)S(0.345)S(0.345)DEQGLSYSSLK RS(-0.46)S(0)S(0)DEQGLS(-86.39)Y(-122.09)S(-128.45)S(-146.9)LK 3 3 0.12458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3622 1997 556 556 3507 3724 3970 4408 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13506 3970 4408 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13506 3970 4408 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13506 Q9NPH3 557 Q9NPH3 Q9NPH3 Interleukin-1 receptor accessory protein IL1RAP sp|Q9NPH3|IL1AP_HUMAN Interleukin-1 receptor accessory protein OS=Homo sapiens GN=IL1RAP PE=1 SV=2 0.344984 0 2.00304E-10 180.16 120.44 180.16 S LQVAMPVKKSPRRSSSDEQGLSYSSLKNV__ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RS(0.31)S(0.345)S(0.345)DEQGLSYSSLK RS(-0.46)S(0)S(0)DEQGLS(-86.39)Y(-122.09)S(-128.45)S(-146.9)LK 4 3 0.12458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3623 1997 557 557 3507 3724 3970 4408 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13506 3970 4408 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13506 3970 4408 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13506 Q9NPI6 315 Q9NPI6 Q9NPI6 mRNA-decapping enzyme 1A DCP1A sp|Q9NPI6|DCP1A_HUMAN mRNA-decapping enzyme 1A OS=Homo sapiens GN=DCP1A PE=1 SV=2 0.990735 22.5927 3.59831E-12 191.82 180.69 191.82 1 S TQSNEKHAPTYTIPLSPVLSPTLPAEAPTAQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPPPPPP HAPT(0.001)YT(0.003)IPLS(0.991)PVLS(0.005)PTLPAEAPTAQVPPSLPR HAPT(-32.63)Y(-111.9)T(-24.82)IPLS(22.59)PVLS(-22.59)PT(-58.36)LPAEAPT(-138.56)AQVPPS(-155.62)LPR 10 4 0.77953 8371.2 0 0 10171 0 0 7367 0 0 10936 0 0 8622.5 0 0 9393.9 0 0 12059 0 0 11810 0 0 9959.6 0 0 56192 0 0 7917.5 0 0 9612.1 0 0 7497.7 0 0 11158 0 0 8722.6 0 0 9621 0 0 12052 0 0 13446 0 0 9916.2 0 0 53185 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 29363000 29363000 0 0 NaN 3624 1998 315 315 1694 1786 1928 2147;2148 1928 2147 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23088 1928 2147 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23088 1928 2147 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23088 Q9NPI6 523 Q9NPI6 Q9NPI6 mRNA-decapping enzyme 1A DCP1A sp|Q9NPI6|DCP1A_HUMAN mRNA-decapping enzyme 1A OS=Homo sapiens GN=DCP1A PE=1 SV=2 0.728525 4.43262 4.75345E-07 139.77 120.38 139.77 1 S QQTVTRSSDLERKASSPSPLTIGTPESQRKP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPXX KAS(0.263)S(0.729)PS(0.009)PLTIGTPESQR KAS(-4.43)S(4.43)PS(-19.11)PLT(-56.72)IGT(-97.71)PES(-113.22)QR 4 3 1.6206 26197 0 0 34260 0 0 28009 0 0 40170 0 0 31004 0 0 21362 0 0 26916 0 0 27377 0 0 39750 0 0 13865 0 0 24796 0 0 32398 0 0 28128 0 0 40582 0 0 31240 0 0 22353 0 0 27946 0 0 27646 0 0 38677 0 0 13689 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 41293000 41293000 0 0 NaN 3625 1998 523 523 2016 2133 2299 2566 2299 2566 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13363 2299 2566 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13363 2299 2566 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13363 Q9NPI6 525 Q9NPI6 Q9NPI6 mRNA-decapping enzyme 1A DCP1A sp|Q9NPI6|DCP1A_HUMAN mRNA-decapping enzyme 1A OS=Homo sapiens GN=DCP1A PE=1 SV=2 0.958738 15.5678 2.94487E-07 153.57 135.33 153.57 1 S TVTRSSDLERKASSPSPLTIGTPESQRKPSI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXPPPPPPPPPPPPPPPPPXXXX KAS(0.014)S(0.027)PS(0.959)PLTIGTPESQR KAS(-18.24)S(-15.57)PS(15.57)PLT(-35.51)IGT(-75.04)PES(-98.55)QR 6 3 1.3729 31481 0 0 27619 0 0 33016 0 0 30082 0 0 26207 0 0 33625 0 0 25712 0 0 31869 0 0 26573 0 0 13155 0 0 29795 0 0 26105 0 0 33073 0 0 30794 0 0 26991 0 0 33549 0 0 26220 0 0 32431 0 0 26183 0 0 13125 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 59792000 59792000 0 0 NaN 3626 1998 525 525 2016 2133 2298 2565 2298 2565 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12815 2298 2565 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12815 2298 2565 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12815 Q9NPI6 539 Q9NPI6 Q9NPI6 mRNA-decapping enzyme 1A DCP1A sp|Q9NPI6|DCP1A_HUMAN mRNA-decapping enzyme 1A OS=Homo sapiens GN=DCP1A PE=1 SV=2 0.999877 39.1047 0.0338011 63.091 25.947 63.091 1 S PSPLTIGTPESQRKPSIILSKSQLQDTLIHL X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX KPS(1)IILSK KPS(39.1)IILS(-39.1)K 3 3 -0.77464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3627 1998 539 539 2166 2288 2462 2742 2462 2742 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16257 2462 2742 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16257 2462 2742 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16257 Q9NPI6 60 Q9NPI6 Q9NPI6 mRNA-decapping enzyme 1A DCP1A sp|Q9NPI6|DCP1A_HUMAN mRNA-decapping enzyme 1A OS=Homo sapiens GN=DCP1A PE=1 SV=2 0.793895 5.85813 3.23752E-05 131.72 102.98 131.72 1 S WEKTDIEGTLFVYRRSASPYHGFTIVNRLNM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX S(0.794)AS(0.206)PYHGFTIVNR S(5.86)AS(-5.86)PY(-40.86)HGFT(-63.31)IVNR 1 3 -1.3709 6787.3 0 0 6101.2 0 0 5798.5 0 0 5367.1 0 0 6926.9 0 0 7352.4 0 0 6454.3 0 0 6654.1 0 0 5756.6 0 0 8668.4 0 0 6418.9 0 0 5759.4 0 0 5908.5 0 0 5587.5 0 0 6955.5 0 0 7288.6 0 0 6573.5 0 0 6962.8 0 0 5709.6 0 0 8316.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9147100 9147100 0 0 NaN 3628 1998 60 60 3616 3844 4097 4554 4097 4554 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14819 4097 4554 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14819 4097 4554 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14819 Q9NPQ8 502 Q9NPQ8 Q9NPQ8 Synembryn-A RIC8A sp|Q9NPQ8|RIC8A_HUMAN Synembryn-A OS=Homo sapiens GN=RIC8A PE=1 SV=3 1 137.396 1.94182E-05 137.4 109.22 137.4 1 S FDKLSRNRVIQPMGMSPRGHLTSLQDAMCET X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX VIQPMGMS(1)PR VIQPMGMS(137.4)PR 8 2 -1.019 18378 0 0 24507 0 0 18677 0 0 22415 0 0 15561 0 0 19229 0 0 15056 0 0 21190 0 0 25690 0 0 10844 0 0 17391 0 0 23139 0 0 18750 0 0 23091 0 0 15978 0 0 19462 0 0 15641 0 0 21506 0 0 24897 0 0 10702 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27602000 27602000 0 0 NaN 3629 1999 502 502 5139 5476 5833 6484 5833 6484 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15980 5833 6484 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15980 5833 6484 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15980 Q9NQ29 336 Q9NQ29 Q9NQ29 Putative RNA-binding protein Luc7-like 1 LUC7L sp|Q9NQ29|LUC7L_HUMAN Putative RNA-binding protein Luc7-like 1 OS=Homo sapiens GN=LUC7L PE=1 SV=1 0.99962 36.1405 0.0122096 76.233 61.295 76.233 1 S SAKYKFSRERASREESWESGRSERGPPDWRL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX ASREES(1)WESGR AS(-38.62)REES(36.14)WES(-36.14)GR 6 2 -1.5698 10925 0 0 9314.5 0 0 8823.4 0 0 10738 0 0 14357 0 0 10241 0 0 15016 0 0 11660 0 0 11167 0 0 3716.3 0 0 10330 0 0 8807.2 0 0 9074.4 0 0 10930 0 0 14249 0 0 10312 0 0 15148 0 0 11753 0 0 11181 0 0 3769.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20793000 20793000 0 0 NaN 3630 2000 336 336 491 522 562 627 562 627 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7629 562 627 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7629 562 627 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7629 Q9NQ29 363 Q9NQ29 Q9NQ29 Putative RNA-binding protein Luc7-like 1 LUC7L sp|Q9NQ29|LUC7L_HUMAN Putative RNA-binding protein Luc7-like 1 OS=Homo sapiens GN=LUC7L PE=1 SV=1 1 86.9106 1.93931E-05 137.33 119.47 86.911 1 S DWRLESSNGKMASRRSEEKEAGEI_______ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPXXXXXXX S(1)EEKEAGEI S(86.91)EEKEAGEI 1 2 -0.0093242 33820 0 0 36254 0 0 33932 0 0 36150 0 0 40179 0 0 35378 0 0 40732 0 0 41366 0 0 39754 0 0 10686 0 0 32002 0 0 34247 0 0 34239 0 0 37112 0 0 40412 0 0 35591 0 0 41408 0 0 41583 0 0 39267 0 0 11020 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 70616000 70616000 0 0 NaN 3631 2000 363 363 3469;3685 3685;3920 3931;4180 4366;4646 4180 4646 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11716 3931 4366 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9812 3931 4366 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9812 Q9NQ55 238 Q9NQ55 Q9NQ55 Suppressor of SWI4 1 homolog PPAN sp|Q9NQ55|SSF1_HUMAN Suppressor of SWI4 1 homolog OS=Homo sapiens GN=PPAN PE=1 SV=1 0.977747 16.4284 1.08839E-18 237.2 222.12 237.2 1 S RLQDISELLATGAGLSESEAEPDGDHNITEL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP LQDISELLATGAGLS(0.978)ES(0.022)EAEPDGDHNITELPQAVAGR LQDIS(-134.14)ELLAT(-71.98)GAGLS(16.43)ES(-16.43)EAEPDGDHNIT(-88.69)ELPQAVAGR 15 4 -0.35394 6981.4 0 0 7020.7 0 0 7921.7 0 0 7474.2 0 0 7318.9 0 0 7012 0 0 7472.8 0 0 9729.4 0 0 8243.5 0 0 117330 0 0 6609.7 0 0 6634.8 0 0 7915.5 0 0 7639.1 0 0 7465.8 0 0 7304.1 0 0 7620.4 0 0 13189 0 0 8101.2 0 0 110700 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 215270000 215270000 0 0 NaN 3632 2001 238 238 2519 2661 2857 3186;3187 2857 3186 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23566 2857 3186 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23566 2857 3186 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23566 Q9NQ55 359 Q9NQ55 Q9NQ55 Suppressor of SWI4 1 homolog PPAN sp|Q9NQ55|SSF1_HUMAN Suppressor of SWI4 1 homolog OS=Homo sapiens GN=PPAN PE=1 SV=1 0.999723 35.5792 6.81819E-23 274.89 241.68 274.89 1 S RKKSLEGMKKARVGGSDEEASGIPSRTASLE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX VGGS(1)DEEASGIPSR VGGS(35.58)DEEAS(-35.58)GIPS(-118.37)R 4 2 -0.065482 59932 0 0 65946 0 0 57164 0 0 66757 0 0 44983 0 0 57643 0 0 44913 0 0 57940 0 0 65295 0 0 15262 0 0 56701 0 0 62302 0 0 57571 0 0 68348 0 0 46386 0 0 58217 0 0 46279 0 0 58567 0 0 63562 0 0 15712 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 305560000 305560000 0 0 NaN 3633 2001 359 359 5114 5451 5806 6456;6457 5806 6457 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10518 5806 6457 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10518 5806 6457 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10518 Q9NQ84 383 Q9NQ84 Q9NQ84 G-protein coupled receptor family C group 5 member C GPRC5C sp|Q9NQ84|GPC5C_HUMAN G-protein coupled receptor family C group 5 member C OS=Homo sapiens GN=GPRC5C PE=1 SV=2 1 67.6291 8.27058E-05 120.66 107.9 120.66 1 S SVYQPTEMALMHKVPSEGAYDIILPRATANS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX VPS(1)EGAYDIILPR VPS(67.63)EGAY(-67.63)DIILPR 3 3 0.011702 1892.4 0 0 2775 0 0 1588.6 0 0 2826.8 0 0 1582.1 0 0 1793.4 0 0 1327.1 0 0 2137 0 0 2239 0 0 8050.9 0 0 1789.5 0 0 2621.8 0 0 1616.6 0 0 2882.7 0 0 1603.1 0 0 1863.2 0 0 1388.1 0 0 2372.8 0 0 2170.5 0 0 7630.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17589000 17589000 0 0 NaN 3634 2002 383 383 5210 5554 5918 6576 5918 6576 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21809 5918 6576 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21809 5918 6576 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21809 Q9NQC3 181 Q9NQC3 Q9NQC3 Reticulon-4 RTN4 sp|Q9NQC3|RTN4_HUMAN Reticulon-4 OS=Homo sapiens GN=RTN4 PE=1 SV=2 0.896956 10.114 2.36874E-09 175.02 158.05 175.02 1 S PAAPPSTPAAPKRRGSSGSVDETLFALPAAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP RGS(0.897)S(0.087)GS(0.015)VDET(0.001)LFALPAASEPVIR RGS(10.11)S(-10.11)GS(-17.85)VDET(-29.68)LFALPAAS(-131.18)EPVIR 3 3 0.44553 7972.1 0 0 15699 0 0 6794.5 0 0 15827 0 0 10219 0 0 8128.7 0 0 10412 0 0 12886 0 0 16473 0 0 63990 0 0 7539.2 0 0 14831 0 0 6951.7 0 0 16119 0 0 10176 0 0 8671.6 0 0 10755 0 0 14669 0 0 15997 0 0 60552 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 68887000 68887000 0 0 NaN 3635 2003 181 181 1636;3260;3436 1723;3458;3649 3694;3891 4099;4319 3694 4099 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21833 3694 4099 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21833 3694 4099 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21833 Q9NQC3 184 Q9NQC3 Q9NQC3 Reticulon-4 RTN4 sp|Q9NQC3|RTN4_HUMAN Reticulon-4 OS=Homo sapiens GN=RTN4 PE=1 SV=2 0.374844 0.649693 0.00545975 87.196 67.328 87.196 S PPSTPAAPKRRGSSGSVDETLFALPAASEPV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP GS(0.281)S(0.323)GS(0.375)VDET(0.021)LFALPAASEPVIR GS(-1.25)S(-0.65)GS(0.65)VDET(-12.43)LFALPAAS(-84.58)EPVIR 5 3 1.1976 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3636 2003 184 184 1636;3260;3436 1723;3458;3649 1862 2075 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23503 1862 2075 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23503 1862 2075 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23503 Q9NQC3 15 Q9NQC3 Q9NQC3 Reticulon-4 RTN4 sp|Q9NQC3|RTN4_HUMAN Reticulon-4 OS=Homo sapiens GN=RTN4 PE=1 SV=2 0.964778 15.2015 5.53335E-18 192.18 175.46 174.86 1 S _MEDLDQSPLVSSSDSPPRPQPAFKYQFVRE X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPPPPPPPXXXXXX MEDLDQSPLVS(0.001)S(0.005)S(0.029)DS(0.965)PPRPQPAFK MEDLDQS(-66.29)PLVS(-30.16)S(-22.71)S(-15.2)DS(15.2)PPRPQPAFK 15 3 -0.14188 32831 0 0 55793 0 0 31394 0 0 54464 0 0 33614 0 0 32717 0 0 38404 0 0 46307 0 0 54079 0 0 102420 0 0 31061 0 0 52698 0 0 31731 0 0 55654 0 0 34063 0 0 34128 0 0 39291 0 0 49009 0 0 52695 0 0 97512 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 451540000 451540000 0 0 NaN 3637 2003 15 15 2680 2833;2834 3038;3039;3040;3041 3383;3384;3385;3386;3387 3039 3384 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18547 3040 3385 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21076 3040 3385 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21076 Q9NQG5 134 Q9NQG5 Q9NQG5 Regulation of nuclear pre-mRNA domain-containing protein 1B RPRD1B sp|Q9NQG5|RPR1B_HUMAN Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Homo sapiens GN=RPRD1B PE=1 SV=1 0.915489 11.2198 0.00952338 72.446 43.118 72.446 1 S GEFIQQLKLSMEDSKSPPPKATEEKKSLKRT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX LS(0.015)MEDS(0.069)KS(0.915)PPPK LS(-17.75)MEDS(-11.22)KS(11.22)PPPK 8 3 -0.44359 15076 0 0 16761 0 0 14965 0 0 16277 0 0 13588 0 0 15059 0 0 12464 0 0 15207 0 0 16085 0 0 7239.2 0 0 14265 0 0 15831 0 0 15056 0 0 16723 0 0 13858 0 0 15164 0 0 12840 0 0 15466 0 0 15717 0 0 7168.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 71182000 71182000 0 0 NaN 3638 2004 134 134 2564 2708 2906 3240 2906 3240 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13539 2906 3240 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13539 2906 3240 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13539 Q9NQG5 166 Q9NQG5 Q9NQG5 Regulation of nuclear pre-mRNA domain-containing protein 1B RPRD1B sp|Q9NQG5|RPR1B_HUMAN Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Homo sapiens GN=RPRD1B PE=1 SV=1 0.687246 6.16555 1.43295E-06 137.25 119.69 137.25 1 S QQIQEEEDDDYPGSYSPQDPSAGPLLTEELI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP TFQQIQEEEDDDY(0.006)PGS(0.166)Y(0.14)S(0.687)PQDPSAGPLLTEELIK T(-87.62)FQQIQEEEDDDY(-20.43)PGS(-6.17)Y(-6.91)S(6.17)PQDPS(-31.54)AGPLLT(-63.93)EELIK 18 4 -0.47364 8568.1 0 0 13468 0 0 9210 0 0 10754 0 0 5991.2 0 0 12128 0 0 6579.8 0 0 17197 0 0 13671 0 0 583120 0 0 8110 0 0 12707 0 0 9198.7 0 0 11229 0 0 6285 0 0 13257 0 0 6863.6 0 0 34624 0 0 13188 0 0 549480 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 419720000 419720000 0 0 NaN 3639 2004 166 166 4710 5021 5348 5943 5348 5943 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23559 5348 5943 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23559 5348 5943 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23559 Q9NQG6 59 Q9NQG6 Q9NQG6 Mitochondrial dynamics protein MID51 MIEF1 sp|Q9NQG6|MID51_HUMAN Mitochondrial dynamics protein MID51 OS=Homo sapiens GN=MIEF1 PE=1 SV=1 0.99116 21.8641 0.00137289 99.539 75.203 99.539 1 S LAVKRMYDRAISAPTSPTRLSHSGKRSWEEP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX AISAPT(0.006)S(0.991)PT(0.002)R AIS(-52.74)APT(-21.86)S(21.86)PT(-26.19)R 7 2 -0.26452 61915 0 0 81802 0 0 56992 0 0 79397 0 0 48171 0 0 55152 0 0 41225 0 0 65898 0 0 90493 0 0 13365 0 0 58569 0 0 77261 0 0 57550 0 0 81280 0 0 49353 0 0 56523 0 0 43646 0 0 66087 0 0 87200 0 0 14110 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 122830000 122830000 0 0 NaN 3640 2005 59 59 257 276 297 331 297 331 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9519 297 331 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9519 297 331 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9519 Q9NQG6 94 Q9NQG6 Q9NQG6 Mitochondrial dynamics protein MID51 MIEF1 sp|Q9NQG6|MID51_HUMAN Mitochondrial dynamics protein MID51 OS=Homo sapiens GN=MIEF1 PE=1 SV=1 0.559666 1.59014 2.58511E-05 125.62 108.25 125.62 1 S SPRLLNRDMKTGLSRSLQTLPTDSSTFDTDT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.56)LQT(0.388)LPT(0.041)DS(0.009)S(0.002)T(0.001)FDTDTFCPPRPK S(1.59)LQT(-1.59)LPT(-11.31)DS(-18.17)S(-24.94)T(-30.41)FDT(-61.33)DT(-80.49)FCPPRPK 1 3 0.0019236 4636.1 0 0 6237.9 0 0 4294.6 0 0 5820 0 0 5679.7 0 0 5360 0 0 5531.9 0 0 6861.3 0 0 7075.4 0 0 18907 0 0 4385.7 0 0 5890.3 0 0 4360.7 0 0 5993.9 0 0 5681.3 0 0 5447.6 0 0 5680.4 0 0 7394 0 0 6915.8 0 0 17962 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14816000 14816000 0 0 NaN 3641 2005 94 94 3973 4233 4517 5020 4517 5020 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19211 4517 5020 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19211 4517 5020 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19211 Q9NQP4 125 Q9NQP4 Q9NQP4 Prefoldin subunit 4 PFDN4 sp|Q9NQP4|PFD4_HUMAN Prefoldin subunit 4 OS=Homo sapiens GN=PFDN4 PE=1 SV=1 1 137.765 1.47453E-16 244.14 233.68 244.14 1 S RVLADLKVQLYAKFGSNINLEADES______ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX FGS(1)NINLEADES FGS(137.76)NINLEADES(-137.76) 3 2 -0.04745 9793.1 0 0 8826.2 0 0 10275 0 0 10702 0 0 9903.5 0 0 10913 0 0 9467.3 0 0 10766 0 0 10631 0 0 14703 0 0 9268.6 0 0 8348.5 0 0 10313 0 0 10877 0 0 10067 0 0 10955 0 0 9689.7 0 0 11248 0 0 10440 0 0 14094 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19344000 19344000 0 0 NaN 3642 2006 125 125 1267 1334 1436 1593 1436 1593 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19012 1436 1593 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19012 1436 1593 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19012 Q9NQQ7 335 Q9NQQ7 Q9NQQ7 Solute carrier family 35 member C2 SLC35C2 sp|Q9NQQ7|S35C2_HUMAN Solute carrier family 35 member C2 OS=Homo sapiens GN=SLC35C2 PE=1 SV=2 0.880852 8.68818 5.15378E-31 292.39 255.14 292.39 1 S HSRGDGGPKALKGLGSSPDLELLLRSSQREE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX GLGS(0.881)S(0.119)PDLELLLR GLGS(8.69)S(-8.69)PDLELLLR 4 2 0.018191 93782 0 0 79457 0 0 92994 0 0 78682 0 0 82423 0 0 93604 0 0 83648 0 0 90092 0 0 84991 0 0 36233 0 0 88739 0 0 75056 0 0 93557 0 0 81075 0 0 84286 0 0 93182 0 0 85124 0 0 91597 0 0 83804 0 0 36203 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 157050000 157050000 0 0 NaN 3643 2007 335 335 1499 1577 1702 1883 1702 1883 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23685 1702 1883 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23685 1702 1883 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23685 Q9NQS7 263 Q9NQS7 Q9NQS7 Inner centromere protein INCENP sp|Q9NQS7|INCE_HUMAN Inner centromere protein OS=Homo sapiens GN=INCENP PE=1 SV=3 1 70.3208 0.0161276 70.321 55.483 70.321 1 S VGTGRSASKLRIAQVSPGPRDSPAFPDSPWR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX IAQVS(1)PGPR IAQVS(70.32)PGPR 5 2 -1.6038 83342 0 0 69072 0 0 82866 0 0 69007 0 0 54625 0 0 77701 0 0 57464 0 0 74005 0 0 72004 0 0 7479.9 0 0 78861 0 0 65250 0 0 83128 0 0 70998 0 0 57155 0 0 77463 0 0 58755 0 0 74601 0 0 70430 0 0 8755.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 148250000 148250000 0 0 NaN 3644 2008 263 263 1777 1876 2023 2254 2023 2254 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10406 2023 2254 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10406 2023 2254 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10406 Q9NQS7 893 Q9NQS7 Q9NQS7 Inner centromere protein INCENP sp|Q9NQS7|INCE_HUMAN Inner centromere protein OS=Homo sapiens GN=INCENP PE=1 SV=3 0.362948 0 0.000125861 120.9 87.215 120.9 S EDIFKKSKPRYHKRTSSAVWNSPPLQGARVP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T(0.363)S(0.363)S(0.274)AVWNSPPLQGAR T(0)S(0)S(-1.22)AVWNS(-80.29)PPLQGAR 2 3 0.62055 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3645 2008 893 893 4952 5280 5623 6250 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16538 5623 6250 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16538 5623 6250 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16538 Q9NQT8 1644 Q9NQT8 Q9NQT8 Kinesin-like protein KIF13B KIF13B sp|Q9NQT8|KI13B_HUMAN Kinesin-like protein KIF13B OS=Homo sapiens GN=KIF13B PE=1 SV=2 1 51.5025 0.0325416 51.503 27.215 51.503 1 S SPGRERPDLEAPAPGSPFRVRRVRASELRSF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX ERPDLEAPAPGS(1)PFR ERPDLEAPAPGS(51.5)PFR 12 3 -1.3849 9128.9 0 0 9294.9 0 0 8706.9 0 0 7304.8 0 0 8462.3 0 0 9807 0 0 9195.4 0 0 9215.9 0 0 8260 0 0 6708.8 0 0 8636.7 0 0 8769.2 0 0 8790 0 0 7662 0 0 8611.5 0 0 9723.6 0 0 9299.3 0 0 9469.3 0 0 8189.8 0 0 6530.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13798000 13798000 0 0 NaN 3646 2009 1644 1644 1121 1180 1270 1397 1270 1397 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14137 1270 1397 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14137 1270 1397 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14137 Q9NQT8 1381 Q9NQT8 Q9NQT8 Kinesin-like protein KIF13B KIF13B sp|Q9NQT8|KI13B_HUMAN Kinesin-like protein KIF13B OS=Homo sapiens GN=KIF13B PE=1 SV=2 0.723058 5.02109 0.0108777 80.871 52.294 80.871 1 S KEQLTGKGKLSRRSISSPNVNRLSGSRQDLI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX S(0.049)IS(0.723)S(0.228)PNVNR S(-11.65)IS(5.02)S(-5.02)PNVNR 3 2 1.9372 18889 0 0 26121 0 0 17859 0 0 25935 0 0 32762 0 0 20117 0 0 31165 0 0 26996 0 0 27858 0 0 4825.2 0 0 17870 0 0 24674 0 0 18222 0 0 26547 0 0 32341 0 0 20519 0 0 31710 0 0 26957 0 0 27628 0 0 5168.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15004000 15004000 0 0 NaN 3647 2009 1381 1381 3870 4123 4399 4893 4399 4893 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8726 4399 4893 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8726 4399 4893 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8726 Q9NQW6 518 Q9NQW6 Q9NQW6 Actin-binding protein anillin ANLN sp|Q9NQW6|ANLN_HUMAN Actin-binding protein anillin OS=Homo sapiens GN=ANLN PE=1 SV=2 0.913758 10.2522 2.92054E-08 174.78 114.18 174.78 1 S STEPKGFTECEMTKSSPLKITLFLEEDKSLK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPXXXXXXXXXXXX GFTECEMTKS(0.086)S(0.914)PLK GFT(-110.33)ECEMT(-46.52)KS(-10.25)S(10.25)PLK 11 3 -0.69805 32766 0 0 31860 0 0 35362 0 0 30854 0 0 11708 0 0 35347 0 0 11660 0 0 28229 0 0 36541 0 0 18801 0 0 31015 0 0 30091 0 0 35169 0 0 31813 0 0 13301 0 0 35176 0 0 12553 0 0 29158 0 0 34999 0 0 18357 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30043000 30043000 0 0 NaN 3648 2010 518 518 1425 1502 1611 1781 1611 1781 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15669 1611 1781 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15669 1611 1781 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15669 Q9NQW6 65 Q9NQW6 Q9NQW6 Actin-binding protein anillin ANLN sp|Q9NQW6|ANLN_HUMAN Actin-binding protein anillin OS=Homo sapiens GN=ANLN PE=1 SV=2 0.971507 17.8451 0.0159415 60.401 37.522 60.401 1 S QQPLSGGEEKSCTKPSPSKKRCSDNTEVEVS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX S(0.016)CT(0.01)KPS(0.972)PS(0.002)K S(-17.85)CT(-19.68)KPS(17.85)PS(-26.72)K 6 3 0.55523 34361 0 0 40253 0 0 34351 0 0 38392 0 0 14940 0 0 33447 0 0 16202 0 0 27664 0 0 42168 0 0 3094.4 0 0 32514 0 0 38015 0 0 34355 0 0 39454 0 0 16350 0 0 33680 0 0 17143 0 0 28066 0 0 40506 0 0 3554 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 67660000 67660000 0 0 NaN 3649 2010 65 65 3650 3880 4134 4593 4134 4593 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7800 4134 4593 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7800 4134 4593 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7800 Q9NQW6 323 Q9NQW6 Q9NQW6 Actin-binding protein anillin ANLN sp|Q9NQW6|ANLN_HUMAN Actin-binding protein anillin OS=Homo sapiens GN=ANLN PE=1 SV=2 0.999084 30.3752 0.00233509 102.07 7.2174 102.07 1 S SCEGQNPELLPKTPISPLKTGVSKPIVKSTL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX T(0.001)PIS(0.999)PLK T(-30.38)PIS(30.38)PLK 4 2 -0.28457 22880 0 0 30538 0 0 24988 0 0 33465 0 0 12943 0 0 22790 0 0 13360 0 0 24039 0 0 33231 0 0 8941.3 0 0 21658 0 0 28865 0 0 24894 0 0 34011 0 0 13871 0 0 23353 0 0 14123 0 0 24334 0 0 31946 0 0 8975.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 208820000 208820000 0 0 NaN 3650 2010 323 323 4827 5152 5491 6109 5491 6109 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15611 5491 6109 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15611 5491 6109 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15611 Q9NQW6 485 Q9NQW6 Q9NQW6 Actin-binding protein anillin ANLN sp|Q9NQW6|ANLN_HUMAN Actin-binding protein anillin OS=Homo sapiens GN=ANLN PE=1 SV=2 0.999111 32.7124 9.36754E-05 134.01 99.759 134.01 1 S QSTPLKKHQGVSKTQSLPVTEKVTENQIPAK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX T(0.001)QS(0.999)LPVTEK T(-32.71)QS(32.71)LPVT(-34.51)EK 3 2 -0.51807 141280 0 0 77318 0 0 139850 0 0 76242 0 0 30138 0 0 139520 0 0 31362 0 0 85671 0 0 87691 0 0 29005 0 0 133680 0 0 73034 0 0 139560 0 0 79366 0 0 37132 0 0 136410 0 0 33407 0 0 88895 0 0 84136 0 0 29295 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 56013000 56013000 0 0 NaN 3651 2010 485 485 4884 5209 5549 6167;6168 5549 6168 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13083 5549 6168 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13083 5549 6168 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13083 Q9NR19 267 Q9NR19 Q9NR19 Acetyl-coenzyme A synthetase, cytoplasmic ACSS2 sp|Q9NR19|ACSA_HUMAN Acetyl-coenzyme A synthetase, cytoplasmic OS=Homo sapiens GN=ACSS2 PE=1 SV=1 0.999918 41.0077 1.07056E-10 184.95 167.04 184.95 1 S HLGRAELGMGDSTSQSPPIKRSCPDVQISWN X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPXXXXXXXXXX AELGMGDSTSQS(1)PPIKR AELGMGDS(-73.47)T(-56.55)S(-41.01)QS(41.01)PPIKR 12 3 -0.91405 30646 0 0 67735 0 0 28580 0 0 69109 0 0 42395 0 0 32279 0 0 46531 0 0 49888 0 0 74377 0 0 39756 0 0 28992 0 0 63995 0 0 29074 0 0 70284 0 0 42291 0 0 34295 0 0 47929 0 0 50557 0 0 72207 0 0 38590 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 96499000 96499000 0 0 NaN 3652 2011 267 267 143 149;150 161;162 182;183 162 183 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13557 162 183 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13557 162 183 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13557 Q9NR19 30 Q9NR19 Q9NR19 Acetyl-coenzyme A synthetase, cytoplasmic ACSS2 sp|Q9NR19|ACSA_HUMAN Acetyl-coenzyme A synthetase, cytoplasmic OS=Homo sapiens GN=ACSS2 PE=1 SV=1 0.99628 24.2786 5.46818E-10 204 167.32 204 1 S RGQEEAGAGGRARSWSPPPEVSRSAHVPSLQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX S(0.004)WS(0.996)PPPEVSR S(-24.28)WS(24.28)PPPEVS(-120.74)R 3 2 -0.068535 46208 0 0 185500 0 0 45033 0 0 177250 0 0 106680 0 0 54234 0 0 110480 0 0 115290 0 0 199270 0 0 32009 0 0 43720 0 0 175190 0 0 46175 0 0 180520 0 0 104760 0 0 60677 0 0 114700 0 0 114250 0 0 192850 0 0 32809 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 222390000 222390000 0 0 NaN 3653 2011 30 30 4591 4896 5216 5791;5792 5216 5792 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14515 5216 5792 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14515 5216 5792 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14515 Q9NR30 71 Q9NR30 Q9NR30 Nucleolar RNA helicase 2 DDX21 sp|Q9NR30|DDX21_HUMAN Nucleolar RNA helicase 2 OS=Homo sapiens GN=DDX21 PE=1 SV=5 0.999999 58.4875 1.08448E-10 183 142.94 183 1 S KQVKKKAEPSEVDMNSPKSKKAKKKEEPSQN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPXXXXXXXXXXXXX AEPSEVDMNS(1)PK AEPS(-58.49)EVDMNS(58.49)PK 10 2 -1.5326 45083 0 0 63642 0 0 45239 0 0 58872 0 0 28811 0 0 45008 0 0 30529 0 0 45883 0 0 66470 0 0 15749 0 0 42660 0 0 60094 0 0 45346 0 0 60516 0 0 30265 0 0 45773 0 0 31978 0 0 46465 0 0 64061 0 0 15892 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 79262000 79262000 0 0 NaN 3654 2012 71 71 151;2001 157;2116 170;2280 192;2546 170 192 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11907 170 192 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11907 170 192 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11907 Q9NR30 89 Q9NR30 Q9NR30 Nucleolar RNA helicase 2 DDX21 sp|Q9NR30|DDX21_HUMAN Nucleolar RNA helicase 2 OS=Homo sapiens GN=DDX21 PE=1 SV=5 1 91.121 1.16219E-10 206.7 159.14 206.7 1 S SKKAKKKEEPSQNDISPKTKSLRKKKEPIEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPXXXXXXXXXXXXX EEPSQNDIS(1)PK EEPS(-91.12)QNDIS(91.12)PK 9 2 -0.41162 115420 0 0 99428 0 0 117790 0 0 96292 0 0 48373 0 0 120100 0 0 47637 0 0 89000 0 0 108940 0 0 40516 0 0 109230 0 0 93908 0 0 117620 0 0 99443 0 0 53235 0 0 119010 0 0 50204 0 0 91699 0 0 104890 0 0 40211 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 361880000 361880000 0 0 NaN 3655 2012 89 89 932;2038;2102 986;2156;2223 1070;2323;2394;2395 1182;2590;2668;2669 1070 1182 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9819 1070 1182 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9819 1070 1182 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9819 Q9NR30 121 Q9NR30 Q9NR30 Nucleolar RNA helicase 2 DDX21 sp|Q9NR30|DDX21_HUMAN Nucleolar RNA helicase 2 OS=Homo sapiens GN=DDX21 PE=1 SV=5 1 64.8301 2.30572E-11 203.72 190.85 64.83 1 S VVSSKTKKVTKNEEPSEEEIDAPKPKKMKKE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPXXXXX NEEPS(1)EEEIDAPKPK NEEPS(64.83)EEEIDAPKPK 5 3 0.26303 107740 0 0 110640 0 0 109850 0 0 109490 0 0 59816 0 0 106200 0 0 58328 0 0 96203 0 0 124620 0 0 29627 0 0 101950 0 0 104510 0 0 109870 0 0 112440 0 0 63697 0 0 106520 0 0 61260 0 0 97779 0 0 120150 0 0 30124 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 717220000 717220000 0 0 NaN 3656 2012 121 121 2799;5292 2968;5639 3180;6011 3532;6677 3180 3532 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12141 6011 6677 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12907 6011 6677 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12907 Q9NR45 275 Q9NR45 Q9NR45 Sialic acid synthase NANS sp|Q9NR45|SIAS_HUMAN Sialic acid synthase OS=Homo sapiens GN=NANS PE=1 SV=2 0.845442 7.37991 0.00718079 93.111 35.151 93.111 1 S AELVRSVRLVERALGSPTKQLLPCEMACNEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX ALGS(0.845)PT(0.155)K ALGS(7.38)PT(-7.38)K 4 2 -0.0048009 36644 0 0 49907 0 0 38725 0 0 48770 0 0 29591 0 0 31665 0 0 31474 0 0 39812 0 0 47711 0 0 3441.4 0 0 34683 0 0 47139 0 0 38766 0 0 49870 0 0 30610 0 0 32611 0 0 32392 0 0 39722 0 0 46388 0 0 4161.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 126230000 126230000 0 0 NaN 3657 2013 275 275 292 313 334 373 334 373 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10570 334 373 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10570 334 373 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10570 Q9NRA8 564 Q9NRA8 Q9NRA8 Eukaryotic translation initiation factor 4E transporter EIF4ENIF1 sp|Q9NRA8|4ET_HUMAN Eukaryotic translation initiation factor 4E transporter OS=Homo sapiens GN=EIF4ENIF1 PE=1 SV=2 1 106.082 2.77459E-11 206.19 183.02 206.19 1 S GSLEPTTSLLGQRAPSPPLSQVFQTRAASAD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX APS(1)PPLSQVFQTR APS(106.08)PPLS(-106.08)QVFQT(-196.63)R 3 3 -0.32008 13548 0 0 10436 0 0 12552 0 0 11268 0 0 13120 0 0 14260 0 0 14802 0 0 13314 0 0 10415 0 0 22929 0 0 12816 0 0 9863.2 0 0 12706 0 0 11567 0 0 13300 0 0 14191 0 0 14866 0 0 14083 0 0 10463 0 0 21898 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 127180000 127180000 0 0 NaN 3658 2014 564 564 372 398 432;433 480;481 433 481 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19672 433 481 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19672 433 481 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19672 Q9NRA8 751 Q9NRA8 Q9NRA8 Eukaryotic translation initiation factor 4E transporter EIF4ENIF1 sp|Q9NRA8|4ET_HUMAN Eukaryotic translation initiation factor 4E transporter OS=Homo sapiens GN=EIF4ENIF1 PE=1 SV=2 0.546379 2.59649 0.000102725 108.9 83.488 108.9 1 S ENLLSSSSVPSADRDSSPTTNSKLSALQRSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPXXXXXXXX ASEENLLSSSS(0.001)VPS(0.011)ADRDS(0.546)S(0.301)PT(0.108)T(0.029)NS(0.005)K AS(-89.5)EENLLS(-65.97)S(-48.33)S(-44.18)S(-29.01)VPS(-17.15)ADRDS(2.6)S(-2.6)PT(-7.06)T(-12.74)NS(-20.15)K 19 4 2.821 9050 0 0 11320 0 0 9434.9 0 0 10170 0 0 8920.9 0 0 8732.1 0 0 7082 0 0 8695.5 0 0 10422 0 0 6972.6 0 0 8565 0 0 10687 0 0 9468.5 0 0 10490 0 0 9060.5 0 0 8829.5 0 0 7388.7 0 0 8933.8 0 0 10142 0 0 6766.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14659000 14659000 0 0 NaN 3659 2014 751 751 449 478 513 575 513 575 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14107 513 575 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14107 513 575 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14107 Q9NRA8 587 Q9NRA8 Q9NRA8 Eukaryotic translation initiation factor 4E transporter EIF4ENIF1 sp|Q9NRA8|4ET_HUMAN Eukaryotic translation initiation factor 4E transporter OS=Homo sapiens GN=EIF4ENIF1 PE=1 SV=2 0.999746 35.9481 4.68306E-08 154.14 131.16 154.14 1 S QTRAASADYLRPRIPSPIGFTPGPQQLLGDP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP IPS(1)PIGFTPGPQQLLGDPFQGMR IPS(35.95)PIGFT(-35.95)PGPQQLLGDPFQGMR 3 3 0.43028 18872 0 0 13633 0 0 15426 0 0 14968 0 0 14759 0 0 16686 0 0 14219 0 0 24925 0 0 15513 0 0 141810 0 0 17845 0 0 12886 0 0 15722 0 0 15314 0 0 15010 0 0 17019 0 0 14535 0 0 28955 0 0 15252 0 0 134100 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 159150000 159150000 0 0 NaN 3660 2014 587 587 1916 2024 2185 2445 2185 2445 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23782 2185 2445 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23782 2185 2445 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23782 Q9NRA8 77 Q9NRA8 Q9NRA8 Eukaryotic translation initiation factor 4E transporter EIF4ENIF1 sp|Q9NRA8|4ET_HUMAN Eukaryotic translation initiation factor 4E transporter OS=Homo sapiens GN=EIF4ENIF1 PE=1 SV=2 0.5 0 0.000445751 103.7 79.545 103.7 1 S DPEKWHASLYPASGRSSPVESLKKELDTDRP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(0.5)S(0.5)PVESLKK S(0)S(0)PVES(-60.89)LKK 1 3 -0.023338 43356 0 0 32537 0 0 44688 0 0 32025 0 0 48240 0 0 42457 0 0 51731 0 0 44952 0 0 30939 0 0 3845.4 0 0 41031 0 0 30734 0 0 44972 0 0 33081 0 0 48774 0 0 42130 0 0 51921 0 0 45110 0 0 31409 0 0 4661.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 138230000 138230000 0 0 NaN 3661 2014 77 77 4401 4689 4993 5540 4993 5540 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12596 4993 5540 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12596 4993 5540 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12596 Q9NRA8 78 Q9NRA8 Q9NRA8 Eukaryotic translation initiation factor 4E transporter EIF4ENIF1 sp|Q9NRA8|4ET_HUMAN Eukaryotic translation initiation factor 4E transporter OS=Homo sapiens GN=EIF4ENIF1 PE=1 SV=2 0.5 0 0.000445751 103.7 79.545 103.7 1 S PEKWHASLYPASGRSSPVESLKKELDTDRPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.5)S(0.5)PVESLKK S(0)S(0)PVES(-60.89)LKK 2 3 -0.023338 43356 0 0 32537 0 0 44688 0 0 32025 0 0 48240 0 0 42457 0 0 51731 0 0 44952 0 0 30939 0 0 3845.4 0 0 41031 0 0 30734 0 0 44972 0 0 33081 0 0 48774 0 0 42130 0 0 51921 0 0 45110 0 0 31409 0 0 4661.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 138230000 138230000 0 0 NaN 3662 2014 78 78 4401 4689 4993 5540 4993 5540 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12596 4993 5540 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12596 4993 5540 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12596 Q9NRA8 951 Q9NRA8 Q9NRA8 Eukaryotic translation initiation factor 4E transporter EIF4ENIF1 sp|Q9NRA8|4ET_HUMAN Eukaryotic translation initiation factor 4E transporter OS=Homo sapiens GN=EIF4ENIF1 PE=1 SV=2 0.996918 27.1037 3.43098E-06 161.67 74.411 161.67 1 S HMHSQLEHRPSQRSSSPVGLAKWFGSDVLQQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX S(0.002)S(0.001)S(0.997)PVGLAK S(-27.1)S(-29.42)S(27.1)PVGLAK 3 2 -0.26533 55684 0 0 35959 0 0 55188 0 0 38094 0 0 54118 0 0 53067 0 0 55705 0 0 48369 0 0 37346 0 0 7999.6 0 0 52689 0 0 33981 0 0 55590 0 0 39224 0 0 54987 0 0 52480 0 0 56124 0 0 48941 0 0 37628 0 0 8652 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 230070000 230070000 0 0 NaN 3663 2014 951 951 4452 4743 5048 5600 5048 5600 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12274 5048 5600 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12274 5048 5600 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12274 Q9NRF9 122 Q9NRF9 Q9NRF9 DNA polymerase epsilon subunit 3 POLE3 sp|Q9NRF9|DPOE3_HUMAN DNA polymerase epsilon subunit 3 OS=Homo sapiens GN=POLE3 PE=1 SV=1 0.999048 30.5919 0.0393955 42.568 20.695 42.568 1 S KKDKDKKTDSEEQDKSRDEDNDEDEERLEEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPXXXXXXXXXXXXXX TDS(0.001)EEQDKS(0.999)R T(-40.93)DS(-30.59)EEQDKS(30.59)R 9 3 0.25291 4439.6 0 0 5057.7 0 0 5045.6 0 0 4598.3 0 0 2832.9 0 0 4417.3 0 0 3269.9 0 0 3473.6 0 0 5352.6 0 0 2312.9 0 0 4203.2 0 0 4775.2 0 0 5019.5 0 0 4746.5 0 0 3013.6 0 0 4428.3 0 0 3364.5 0 0 3590.5 0 0 5193.1 0 0 2258.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8278500 8278500 0 0 NaN 3664 2015 122 122 4666 4977 5301 5889 5301 5889 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5555 5301 5889 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5555 5301 5889 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5555 Q9NRG9 495 Q9NRG9 Q9NRG9 Aladin AAAS sp|Q9NRG9|AAAS_HUMAN Aladin OS=Homo sapiens GN=AAAS PE=1 SV=1 1 141.196 5.19828E-05 141.2 96.114 141.2 1 S AHIPLYFVNAQFPRFSPVLGRAQEPPAGGGG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPXXXXXXXXXX FS(1)PVLGR FS(141.2)PVLGR 2 2 0.048189 13551 0 0 16736 0 0 12912 0 0 15909 0 0 15512 0 0 10362 0 0 16432 0 0 15895 0 0 16346 0 0 5471.5 0 0 12820 0 0 15805 0 0 13072 0 0 16296 0 0 15601 0 0 10713 0 0 16680 0 0 15894 0 0 16132 0 0 5519.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 347070000 347070000 0 0 NaN 3665 2016 495 495 1326 1399 1506 1668 1506 1668 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17160 1506 1668 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17160 1506 1668 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17160 Q9NRH2 351 Q9NRH2 Q9NRH2 SNF-related serine/threonine-protein kinase SNRK sp|Q9NRH2|SNRK_HUMAN SNF-related serine/threonine-protein kinase OS=Homo sapiens GN=SNRK PE=1 SV=2 0.986909 19.4029 0.000996241 115.41 61.346 115.41 1 S ILREKQEKEIQTRSASPSNIKAQFRQSWPTK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX S(0.011)AS(0.987)PS(0.002)NIK S(-19.4)AS(19.4)PS(-27.47)NIK 3 2 0.52937 30008 0 0 23994 0 0 31916 0 0 21823 0 0 33391 0 0 31861 0 0 32862 0 0 28951 0 0 24895 0 0 6538.7 0 0 28402 0 0 22654 0 0 32045 0 0 22701 0 0 33783 0 0 31464 0 0 33258 0 0 29350 0 0 24902 0 0 6827 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24443000 24443000 0 0 NaN 3666 2017 351 351 3615 3843 4096 4553 4096 4553 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9598 4096 4553 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9598 4096 4553 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9598 Q9NRL2 1413 Q9NRL2 Q9NRL2 Bromodomain adjacent to zinc finger domain protein 1A BAZ1A sp|Q9NRL2|BAZ1A_HUMAN Bromodomain adjacent to zinc finger domain protein 1A OS=Homo sapiens GN=BAZ1A PE=1 SV=2 1 63.8956 5.00099E-07 151.31 123.01 151.31 1 S SLQESESKRRCRKRQSPEPSPVTLGRRSSGR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX RQS(1)PEPSPVTLGR RQS(63.9)PEPS(-63.9)PVT(-98.05)LGR 3 3 0.19491 8004.1 0 0 10737 0 0 8961.9 0 0 10802 0 0 10278 0 0 9270.7 0 0 10760 0 0 10611 0 0 11743 0 0 2107.3 0 0 7577.5 0 0 10143 0 0 8986.1 0 0 11063 0 0 10361 0 0 9381.6 0 0 10957 0 0 10655 0 0 11545 0 0 2229.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18242000 18242000 0 0 NaN 3667 2018 1413 1413 3425 3637 3879 4305 3879 4305 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10163 3879 4305 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10163 3879 4305 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10163 Q9NRY4 975 Q9NRY4 Q9NRY4 Rho GTPase-activating protein 35 ARHGAP35 sp|Q9NRY4|RHG35_HUMAN Rho GTPase-activating protein 35 OS=Homo sapiens GN=ARHGAP35 PE=1 SV=3 0.991525 20.6817 8.08698E-05 106.69 90.592 106.69 1 S ACSTTEEVFNSPRAGSPLCNSNLQDSEEDIE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP AGS(0.992)PLCNS(0.008)NLQDSEEDIEPSYSLFR AGS(20.68)PLCNS(-20.68)NLQDS(-72.27)EEDIEPS(-101.71)Y(-101.63)S(-104.06)LFR 3 3 1.6486 4287.4 0 0 5987.4 0 0 5511.7 0 0 7894 0 0 4782.6 0 0 4966.6 0 0 4972 0 0 6413.3 0 0 7135.7 0 0 38813 0 0 4061.5 0 0 5666.9 0 0 5471 0 0 7941.9 0 0 4901.2 0 0 5200.1 0 0 5111.2 0 0 7546.4 0 0 6949.1 0 0 36695 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15915000 15915000 0 0 NaN 3668 2019 975 975 228 242 260 291 260 291 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21806 260 291 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21806 260 291 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21806 Q9NRY4 770 Q9NRY4 Q9NRY4 Rho GTPase-activating protein 35 ARHGAP35 sp|Q9NRY4|RHG35_HUMAN Rho GTPase-activating protein 35 OS=Homo sapiens GN=ARHGAP35 PE=1 SV=3 0.951119 13.508 0.00352319 91.07 62.901 91.07 1 S LKGLLDSKRNLNLVSSTASIKDLADVDLRIV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX NLNLVS(0.006)S(0.951)T(0.042)ASIK NLNLVS(-21.74)S(13.51)T(-13.51)AS(-39.75)IK 7 3 0.21533 5168.7 0 0 6105 0 0 5611 0 0 5049.2 0 0 6521.8 0 0 6459.1 0 0 5286.3 0 0 6555.6 0 0 6905.9 0 0 4535 0 0 4892.6 0 0 5761.2 0 0 5633.3 0 0 5271.5 0 0 6548.6 0 0 6421.1 0 0 5484.7 0 0 6708.7 0 0 6745.4 0 0 4422 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9950500 9950500 0 0 NaN 3669 2019 770 770 2852 3022 3236 3591 3236 3591 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18123 3236 3591 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18123 3236 3591 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18123 Q9NRY4 1176 Q9NRY4 Q9NRY4 Rho GTPase-activating protein 35 ARHGAP35 sp|Q9NRY4|RHG35_HUMAN Rho GTPase-activating protein 35 OS=Homo sapiens GN=ARHGAP35 PE=1 SV=3 0.675461 3.21583 1.25661E-22 265.16 237.57 265.16 1 S RCTRLGRFASYRTSFSVGSDDELGPIRKKEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPXXXX T(0.001)S(0.002)FS(0.675)VGS(0.322)DDELGPIR T(-30.23)S(-25.79)FS(3.22)VGS(-3.22)DDELGPIR 4 2 -0.52867 7437.4 0 0 6791.5 0 0 7147.4 0 0 6967 0 0 9975.6 0 0 7147.6 0 0 9747.9 0 0 9413.8 0 0 7476 0 0 42813 0 0 7036.6 0 0 6416.7 0 0 7247.9 0 0 7145.7 0 0 9950.9 0 0 7265.4 0 0 9871.3 0 0 10645 0 0 7472.9 0 0 40531 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8438100 8438100 0 0 NaN 3670 2019 1176 1176 4913 5238 5581 6203 5581 6203 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19004 5581 6203 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19004 5581 6203 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19004 Q9NRY5 146 Q9NRY5 Q9NRY5 Protein FAM114A2 FAM114A2 sp|Q9NRY5|F1142_HUMAN Protein FAM114A2 OS=Homo sapiens GN=FAM114A2 PE=1 SV=4 0.741954 4.5868 9.59731E-12 180.38 168.97 180.38 1 S KYVAGETNAKENENSSPVAGAFGVFSTISTA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP ENENS(0.258)S(0.742)PVAGAFGVFSTISTAVQSTGK ENENS(-4.59)S(4.59)PVAGAFGVFS(-113.59)T(-119.76)IS(-124.86)T(-130.77)AVQS(-162.06)T(-164.26)GK 6 3 0.63572 10095 0 0 14424 0 0 12473 0 0 13807 0 0 6720.7 0 0 11581 0 0 4622.4 0 0 12498 0 0 16319 0 0 66700 0 0 9560.9 0 0 13623 0 0 12348 0 0 14179 0 0 7141.2 0 0 11845 0 0 5126.3 0 0 14511 0 0 15606 0 0 63095 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37043000 37043000 0 0 NaN 3671 2020 146 146 1070 1128 1216 1337 1216 1337 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24073 1216 1337 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24073 1216 1337 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24073 Q9NRY6 230 Q9NRY6 Q9NRY6 Phospholipid scramblase 3 PLSCR3 sp|Q9NRY6|PLS3_HUMAN Phospholipid scramblase 3 OS=Homo sapiens GN=PLSCR3 PE=1 SV=2 0.999192 30.9222 0.0506871 41.967 9.9042 41.967 2 S GCGTDTNFEVKTRDESRSVGRISKQWGGLVR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX DES(0.999)RS(1)VGRIS(0.001)K DES(30.92)RS(35.4)VGRIS(-30.92)K 3 3 1.7191 0 27670 0 0 11535 0 0 28453 0 0 14172 0 0 11655 0 0 27007 0 0 12002 0 0 19914 0 0 13149 0 0 4406.9 0 0 26186 0 0 10912 0 0 28400 0 0 14597 0 0 12825 0 0 26417 0 0 12232 0 0 20383 0 0 12925 0 0 4610.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 16401000 0 16401000 0 NaN 3672 2021 230 230 664 708 755 835 755 835 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12230 755 835 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12230 755 835 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12230 Q9NRY6 232 Q9NRY6 Q9NRY6 Phospholipid scramblase 3 PLSCR3 sp|Q9NRY6|PLS3_HUMAN Phospholipid scramblase 3 OS=Homo sapiens GN=PLSCR3 PE=1 SV=2 0.999712 35.3964 0.0506871 41.967 9.9042 41.967 2 S GTDTNFEVKTRDESRSVGRISKQWGGLVREA X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX DES(0.999)RS(1)VGRIS(0.001)K DES(30.92)RS(35.4)VGRIS(-30.92)K 5 3 1.7191 0 27670 0 0 11535 0 0 28453 0 0 14172 0 0 11655 0 0 27007 0 0 12002 0 0 19914 0 0 13149 0 0 4406.9 0 0 26186 0 0 10912 0 0 28400 0 0 14597 0 0 12825 0 0 26417 0 0 12232 0 0 20383 0 0 12925 0 0 4610.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 16401000 0 16401000 0 NaN 3673 2021 232 232 664 708 755 835 755 835 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12230 755 835 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12230 755 835 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12230 Q9NS23 207 Q9NS23 Q9NS23 Ras association domain-containing protein 1 RASSF1 sp|Q9NS23|RASF1_HUMAN Ras association domain-containing protein 1 OS=Homo sapiens GN=RASSF1 PE=1 SV=1 0.499995 0 0.0192991 87.184 49.189 87.184 1 S ARRGPGRGTSVRRRTSFYLPKDAVKHLHVLS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RT(0.5)S(0.5)FYLPK RT(0)S(0)FY(-47.18)LPK 3 3 -0.6147 5901.6 0 0 6402.3 0 0 6766.4 0 0 8136 0 0 14776 0 0 6408 0 0 17259 0 0 11270 0 0 7295.8 0 0 1909.1 0 0 5587.6 0 0 6057.9 0 0 6866.4 0 0 8220.2 0 0 14548 0 0 6564.7 0 0 17176 0 0 11174 0 0 7621.3 0 0 2058.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20917000 20917000 0 0 NaN 3674 2022 207 207 3533;4914 3750;5239 3996 4436 3996 4436 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16064 3996 4436 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16064 3996 4436 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16064 Q9NS56 585 Q9NS56 Q9NS56 E3 ubiquitin-protein ligase Topors TOPORS sp|Q9NS56|TOPRS_HUMAN E3 ubiquitin-protein ligase Topors OS=Homo sapiens GN=TOPORS PE=1 SV=1 0.999397 32.4235 0.012296 81.865 54.536 81.865 1 S SPRNLNSSVRGDRVYSPYNHRHRKRGRSRSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX VYS(0.999)PY(0.001)NHR VY(-45.1)S(32.42)PY(-32.42)NHR 3 2 0.1106 19418 0 0 13664 0 0 19059 0 0 14878 0 0 13767 0 0 20414 0 0 15333 0 0 17595 0 0 15324 0 0 4570.8 0 0 18373 0 0 12915 0 0 19151 0 0 15291 0 0 14305 0 0 20189 0 0 15532 0 0 17896 0 0 15121 0 0 4711.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11678000 11678000 0 0 NaN 3675 2023 585 585 5327 5675 6051 6725 6051 6725 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8905 6051 6725 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8905 6051 6725 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8905 Q9NS69 15 Q9NS69 Q9NS69 Mitochondrial import receptor subunit TOM22 homolog TOMM22 sp|Q9NS69|TOM22_HUMAN Mitochondrial import receptor subunit TOM22 homolog OS=Homo sapiens GN=TOMM22 PE=1 SV=3 1 66.9249 4.42692E-06 66.925 54.076 66.925 1 S _MAAAVAAAGAGEPQSPDELLPKGDAEKPEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPPPXXXXXXXX AAAVAAAGAGEPQS(1)PDELLPK AAAVAAAGAGEPQS(66.92)PDELLPK 14 3 -0.77536 5319 0 0 5130.2 0 0 5958.1 0 0 4555.5 0 0 9567.3 0 0 5285.9 0 0 8843.2 0 0 7247.8 0 0 4967.4 0 0 26271 0 0 5035.5 0 0 4843 0 0 6005.5 0 0 4724.2 0 0 9481.9 0 0 5339.8 0 0 8930.3 0 0 7985.6 0 0 5065.8 0 0 24905 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20128000 20128000 0 0 NaN 3676 2024 15 15 13 14 17 24 17 24 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21486 17 24 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21486 17 24 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21486 Q9NS87 568 Q9NS87 Q9NS87 Kinesin-like protein KIF15 KIF15 sp|Q9NS87|KIF15_HUMAN Kinesin-like protein KIF15 OS=Homo sapiens GN=KIF15 PE=1 SV=1 1 77.7442 0.00611787 82.259 56.303 77.744 1 S EISGMEKSDKNQQGFSPKAQKEPCLFANTEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX NQQGFS(1)PK NQQGFS(77.74)PK 6 2 -0.45248 76856 0 0 63546 0 0 79225 0 0 62428 0 0 38612 0 0 75654 0 0 37478 0 0 61659 0 0 66084 0 0 14256 0 0 72734 0 0 60023 0 0 79140 0 0 64379 0 0 41592 0 0 75093 0 0 38987 0 0 62820 0 0 63992 0 0 14851 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 60632000 60632000 0 0 NaN 3677 2025 568 568 2896;3660 3070;3893 3288;4152 3645;4615 3288 3645 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10305 4152 4615 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9948 4152 4615 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9948 Q9NS91 471 Q9NS91 Q9NS91 E3 ubiquitin-protein ligase RAD18 RAD18 sp|Q9NS91|RAD18_HUMAN E3 ubiquitin-protein ligase RAD18 OS=Homo sapiens GN=RAD18 PE=1 SV=2 1 75.013 2.4599E-07 169.52 110.1 169.52 1 S AWEASHKNDLQDTEISPRQNRRTRAAESAEI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX NDLQDTEIS(1)PR NDLQDT(-75.01)EIS(75.01)PR 9 2 -0.18528 18336 0 0 33455 0 0 17764 0 0 33347 0 0 22631 0 0 17904 0 0 23722 0 0 27369 0 0 35134 0 0 22476 0 0 17348 0 0 31603 0 0 17981 0 0 33998 0 0 22705 0 0 18797 0 0 24407 0 0 27764 0 0 34182 0 0 21798 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 35519000 35519000 0 0 NaN 3678 2026 471 471 2792 2961 3173 3524 3173 3524 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11063 3173 3524 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11063 3173 3524 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11063 Q9NS91 99 Q9NS91 Q9NS91 E3 ubiquitin-protein ligase RAD18 RAD18 sp|Q9NS91|RAD18_HUMAN E3 ubiquitin-protein ligase RAD18 OS=Homo sapiens GN=RAD18 PE=1 SV=2 1 125.975 5.85212E-05 125.98 96.532 125.98 1 S SLNFARNHLLQFALESPAKSPASSSSKNLAV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX NHLLQFALES(1)PAK NHLLQFALES(125.98)PAK 10 3 0.088611 3935.4 0 0 5806.6 0 0 3871.1 0 0 5622.2 0 0 3586 0 0 4867.2 0 0 3888.5 0 0 3746.6 0 0 5839.9 0 0 13900 0 0 3723.7 0 0 5484.2 0 0 3898.8 0 0 5771.8 0 0 3662 0 0 4924.5 0 0 3997.1 0 0 4220.4 0 0 5679.5 0 0 13175 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5111500 5111500 0 0 NaN 3679 2026 99 99 2820 2990 3203 3556 3203 3556 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19836 3203 3556 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19836 3203 3556 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19836 Q9NS91 158 Q9NS91 Q9NS91 E3 ubiquitin-protein ligase RAD18 RAD18 sp|Q9NS91|RAD18_HUMAN E3 ubiquitin-protein ligase RAD18 OS=Homo sapiens GN=RAD18 PE=1 SV=2 0.955202 13.2884 0.0312769 49.813 15.852 49.813 1 S GSTSELLIKENKSKFSPQKEASPAAKTKETR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX S(0.045)KFS(0.955)PQK S(-13.29)KFS(13.29)PQK 4 3 0.24238 18905 0 0 32819 0 0 19154 0 0 33263 0 0 13533 0 0 19159 0 0 13002 0 0 23679 0 0 35324 0 0 3567.3 0 0 17890 0 0 31006 0 0 19203 0 0 33900 0 0 14079 0 0 19897 0 0 13871 0 0 23684 0 0 33907 0 0 3907 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 70325000 70325000 0 0 NaN 3680 2026 158 158 3884 4138 4416 4910 4416 4910 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11086 4416 4910 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11086 4416 4910 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11086 Q9NSI6 1475 Q9NSI6 Q9NSI6 Bromodomain and WD repeat-containing protein 1 BRWD1 sp|Q9NSI6|BRWD1_HUMAN Bromodomain and WD repeat-containing protein 1 OS=Homo sapiens GN=BRWD1 PE=1 SV=4 0.994772 22.7967 4.12965E-07 150.69 136.78 150.69 1 S KRLKSQTKIIPELVGSPTQSTSSRTAYLGTH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPXXXXXXX IIPELVGS(0.995)PT(0.005)QSTSSR IIPELVGS(22.8)PT(-22.8)QS(-54.49)T(-68.82)S(-72.7)S(-76.54)R 8 3 -0.41091 2871.8 0 0 3440.5 0 0 2959.2 0 0 3846.9 0 0 4464.8 0 0 3526.4 0 0 3420 0 0 3748.8 0 0 4436.4 0 0 7604.8 0 0 2717.8 0 0 3252.5 0 0 2991.2 0 0 3919.9 0 0 4428.1 0 0 3566.1 0 0 3559.3 0 0 3980.8 0 0 4334.2 0 0 7247.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10548000 10548000 0 0 NaN 3681 2027 1475 1475 1861 1965 2122 2379 2122 2379 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20647 2122 2379 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20647 2122 2379 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20647 Q9NSI8 74 Q9NSI8 Q9NSI8 SAM domain-containing protein SAMSN-1 SAMSN1 sp|Q9NSI8|SAMN1_HUMAN SAM domain-containing protein SAMSN-1 OS=Homo sapiens GN=SAMSN1 PE=1 SV=1 0.98308 17.6418 0.0492747 47.96 28.689 47.96 1 S TSNNGGGLGKKMRAISWTMKKKVGKKYIKAL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX AIS(0.983)WT(0.017)MK AIS(17.64)WT(-17.64)MK 3 2 0.26018 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3682 2028 74 74 260 280;281 302 336 302 336 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16637 302 336 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16637 302 336 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16637 Q9NSI8 90 Q9NSI8 Q9NSI8 SAM domain-containing protein SAMSN-1 SAMSN1 sp|Q9NSI8|SAMN1_HUMAN SAM domain-containing protein SAMSN-1 OS=Homo sapiens GN=SAMSN1 PE=1 SV=1 1 120.992 7.08919E-16 217.09 181.12 217.09 1 S WTMKKKVGKKYIKALSEEKDEEDGENAHPYR X;Phospho (STY);Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP ALS(1)EEKDEEDGENAHPYR ALS(120.99)EEKDEEDGENAHPY(-120.99)R 3 3 -0.57979 16261 0 0 36981 0 0 18672 0 0 32969 0 0 59389 0 0 18071 0 0 72442 0 0 39554 0 0 40464 0 0 5755.5 0 0 15396 0 0 34911 0 0 19186 0 0 33857 0 0 58018 0 0 19058 0 0 72237 0 0 39016 0 0 41282 0 0 6334.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 239900000 239900000 0 0 NaN 3683 2028 90 90 310 331 352 392 352 392 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10038 352 392 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10038 352 392 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10038 Q9NSI8 125 Q9NSI8 Q9NSI8 SAM domain-containing protein SAMSN-1 SAMSN1 sp|Q9NSI8|SAMN1_HUMAN SAM domain-containing protein SAMSN-1 OS=Homo sapiens GN=SAMSN1 PE=1 SV=1 0.954888 13.5376 6.16759E-34 298.28 282.56 298.28 1 S VIGTHTEKVSLKASDSMDSLYSGQSSSSGIT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP AS(0.042)DS(0.955)MDS(0.003)LYSGQSSSSGITSCSDGTSNR AS(-13.54)DS(13.54)MDS(-25.29)LY(-89.29)S(-92.01)GQS(-178.54)S(-198.71)S(-202.74)S(-208.34)GIT(-224.31)S(-229.34)CS(-238.95)DGT(-258.32)S(-261.29)NR 4 3 -0.057043 2476 0 0 6395.1 0 0 4018 0 0 5418.4 0 0 8667.5 0 0 4094.1 0 0 10121 0 0 6496.4 0 0 7705.3 0 0 46072 0 0 2348.7 0 0 6035.7 0 0 4016.9 0 0 5601.8 0 0 8539.6 0 0 4279.7 0 0 10166 0 0 7811.5 0 0 7705.3 0 0 43533 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 217100000 217100000 0 0 NaN 3684 2028 125 125 445 474;475 509;510 570;571 510 571 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13778 510 571 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13778 510 571 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13778 Q9NSI8 372 Q9NSI8 Q9NSI8 SAM domain-containing protein SAMSN-1 SAMSN1 sp|Q9NSI8|SAMN1_HUMAN SAM domain-containing protein SAMSN-1 OS=Homo sapiens GN=SAMSN1 PE=1 SV=1 0.999985 48.1789 0.0183169 70.919 66.563 70.919 1 S ENLSDMVHKIIITEPSD______________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPXXXXXXXXXXXXXX IIITEPS(1)D IIIT(-48.18)EPS(48.18)D 7 2 0.1544 4602.2 0 0 6174.8 0 0 4741.8 0 0 5032.2 0 0 6843.9 0 0 4814.3 0 0 6856.4 0 0 6019.7 0 0 5817.7 0 0 8716.8 0 0 4355.4 0 0 5826.6 0 0 4792.5 0 0 5233.2 0 0 6820.3 0 0 4866.8 0 0 6950.2 0 0 6254.1 0 0 5784.4 0 0 8347.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10333000 10333000 0 0 NaN 3685 2028 372 372 1857 1961 2118 2375 2118 2375 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18791 2118 2375 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18791 2118 2375 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18791 Q9NSI8 7 Q9NSI8 Q9NSI8 SAM domain-containing protein SAMSN-1 SAMSN1 sp|Q9NSI8|SAMN1_HUMAN SAM domain-containing protein SAMSN-1 OS=Homo sapiens GN=SAMSN1 PE=1 SV=1 0.999986 48.622 3.95359E-06 159.52 122.01 159.52 1 S _________MLKRKPSNVSEKEKHQKPKRSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX RKPS(1)NVSEK RKPS(48.62)NVS(-48.62)EK 4 4 0.11571 10697 0 0 23736 0 0 11321 0 0 20231 0 0 43358 0 0 9276.1 0 0 48398 0 0 24944 0 0 25231 0 0 2260.1 0 0 10124 0 0 22403 0 0 11765 0 0 20811 0 0 42158 0 0 9987.6 0 0 48388 0 0 24482 0 0 25878 0 0 2705.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 66760000 66760000 0 0 NaN 3686 2028 7 7 3296 3497 3734 4148 3734 4148 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7474 3734 4148 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7474 3734 4148 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7474 Q9NSI8 23 Q9NSI8 Q9NSI8 SAM domain-containing protein SAMSN-1 SAMSN1 sp|Q9NSI8|SAMN1_HUMAN SAM domain-containing protein SAMSN-1 OS=Homo sapiens GN=SAMSN1 PE=1 SV=1 0.94716 15.5449 2.83718E-09 194.52 127.9 61.082 1 S NVSEKEKHQKPKRSSSFGNFDRFRNNSLSKP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX RS(0.026)S(0.026)S(0.947)FGNFDR RS(-15.54)S(-15.54)S(15.54)FGNFDR 4 3 0.30766 47024 0 0 144800 0 0 48508 0 0 149600 0 0 263780 0 0 46109 0 0 287660 0 0 151980 0 0 138680 0 0 18584 0 0 44502 0 0 136810 0 0 51440 0 0 151650 0 0 255170 0 0 52199 0 0 287590 0 0 148900 0 0 143150 0 0 21017 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 1756900000 1756900000 0 0 NaN 3687 2028 23 23 3509;4420 3726;4709 3972;5013 4411;5561 3972 4411 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10484 5013 5561 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13267 5013 5561 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13267 Q9NSK0 590 Q9NSK0 Q9NSK0 Kinesin light chain 4 KLC4 sp|Q9NSK0|KLC4_HUMAN Kinesin light chain 4 OS=Homo sapiens GN=KLC4 PE=1 SV=3 0.98947 19.7299 4.74795E-05 113.23 89.668 113.23 1 S GTEPRPSSSNMKRAASLNYLNQPSAAPLQVS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP AAS(0.989)LNY(0.011)LNQPSAAPLQVSR AAS(19.73)LNY(-19.73)LNQPS(-74.49)AAPLQVS(-96.92)R 3 3 -0.69164 6307.2 0 0 7292.9 0 0 6881 0 0 7206.4 0 0 7725.6 0 0 7186.2 0 0 8254.4 0 0 7019.1 0 0 6883.8 0 0 10390 0 0 5970.4 0 0 6888.9 0 0 6907.1 0 0 7404.3 0 0 7796.3 0 0 7221.4 0 0 8339.3 0 0 7360.2 0 0 6850.3 0 0 9946.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 128590000 128590000 0 0 NaN 3688 2029 590 590 68 73 80 92 80 92 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18194 80 92 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18194 80 92 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18194 Q9NSK0 460 Q9NSK0 Q9NSK0 Kinesin light chain 4 KLC4 sp|Q9NSK0|KLC4_HUMAN Kinesin light chain 4 OS=Homo sapiens GN=KLC4 PE=1 SV=3 0.846234 7.41413 1.20075E-07 172.86 122.77 172.86 1 S PYAEYGGWYKACKVSSPTVNTTLRNLGALYR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX VS(0.153)S(0.846)PTVNTTLR VS(-7.41)S(7.41)PT(-34.84)VNT(-69.73)T(-77.35)LR 3 2 0.71537 15212 0 0 16382 0 0 15786 0 0 15391 0 0 16671 0 0 15854 0 0 17127 0 0 15448 0 0 14619 0 0 7865.3 0 0 14397 0 0 15470 0 0 15874 0 0 15871 0 0 16870 0 0 15881 0 0 17343 0 0 15749 0 0 14531 0 0 7763.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14303000 14303000 0 0 NaN 3689 2029 460 460 5278 5625 5996 6662 5996 6662 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11900 5996 6662 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11900 5996 6662 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11900 Q9NSV4 1093 Q9NSV4 Q9NSV4 Protein diaphanous homolog 3 DIAPH3 sp|Q9NSV4|DIAP3_HUMAN Protein diaphanous homolog 3 OS=Homo sapiens GN=DIAPH3 PE=1 SV=4 0.990096 20.0282 5.6387E-07 143.39 112.82 143.39 1 S RRKRTPMPKDVRQSLSPMSQRPVLKVCNHEN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX QSLS(0.99)PMS(0.01)QRPVLK QS(-41.72)LS(20.03)PMS(-20.03)QRPVLK 4 3 0.2511 40921 0 0 63557 0 0 46204 0 0 58645 0 0 27632 0 0 43996 0 0 22801 0 0 44815 0 0 66378 0 0 10008 0 0 38741 0 0 60012 0 0 45984 0 0 60279 0 0 29110 0 0 44783 0 0 24635 0 0 45222 0 0 63647 0 0 10461 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 41046000 41046000 0 0 NaN 3690 2030 1093 1093 3140 3331 3562 3948;3949 3562 3949 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14689 3562 3949 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14689 3562 3949 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14689 Q9NTI5 1358 Q9NTI5 Q9NTI5 Sister chromatid cohesion protein PDS5 homolog B PDS5B sp|Q9NTI5|PDS5B_HUMAN Sister chromatid cohesion protein PDS5 homolog B OS=Homo sapiens GN=PDS5B PE=1 SV=1 0.999532 33.3026 9.44251E-12 209.39 192.31 209.39 1;2 S SKQHRVSRRAQQRAESPESSAIESTQSTPQK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP AES(1)PESSAIESTQSTPQK AES(33.3)PES(-33.3)S(-62.16)AIES(-117.5)T(-141.81)QS(-158.47)T(-179.1)PQK 3 3 0.46821 30276 15672 0 17195 12970 0 32398 17650 0 14411 11941 0 22569 18101 0 32838 15184 0 20090 20530 0 23244 17920 0 17681 12227 0 10094 15999 0 28657 14837 0 16228 12247 0 32376 17669 0 15263 12376 0 23446 18369 0 31991 15140 0 20503 20553 0 23991 18351 0 17548 12417 0 10042 15480 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 163430000 144410000 19021000 0 NaN 3691 2031 1358 1358 160 166;167 179;180 203;204 179 203 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11787 179 203 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11787 179 203 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11787 Q9NTI5 1383 Q9NTI5 Q9NTI5 Sister chromatid cohesion protein PDS5 homolog B PDS5B sp|Q9NTI5|PDS5B_HUMAN Sister chromatid cohesion protein PDS5 homolog B OS=Homo sapiens GN=PDS5B PE=1 SV=1 0.71248 3.99392 0.0258658 67.685 46.732 67.685 2 S QSTPQKGRGRPSKTPSPSQPKKNVRVGRSKQ X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPXXXXXXXXXX GRPS(0.402)KT(0.589)PS(0.712)PS(0.297)QPK GRPS(-1.74)KT(1.74)PS(3.99)PS(-3.99)QPK 8 3 0.351 0 20674 0 0 10826 0 0 20433 0 0 10862 0 0 13450 0 0 22662 0 0 12134 0 0 14247 0 0 10670 0 0 3053.5 0 0 19562 0 0 10227 0 0 20500 0 0 11340 0 0 14042 0 0 22089 0 0 12374 0 0 14709 0 0 10590 0 0 3204.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 19421000 0 19421000 0 NaN 3692 2031 1383 1383 1590 1676 1812 2013 1812 2013 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7262 1812 2013 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7262 1812 2013 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7262 Q9NTI5 1166 Q9NTI5 Q9NTI5 Sister chromatid cohesion protein PDS5 homolog B PDS5B sp|Q9NTI5|PDS5B_HUMAN Sister chromatid cohesion protein PDS5 homolog B OS=Homo sapiens GN=PDS5B PE=1 SV=1 0.985691 18.3812 5.86728E-16 223.19 204.11 223.19 1 S RMETVSNASSSSNPSSPGRIKGRLDSSEMDH X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX METVSNASSSSNPS(0.014)S(0.986)PGR MET(-183.51)VS(-171.72)NAS(-136.91)S(-114.49)S(-96.92)S(-70.81)NPS(-18.38)S(18.38)PGR 15 3 -0.061824 20650 0 0 16884 0 0 23234 0 0 18109 0 0 20153 0 0 22494 0 0 21278 0 0 19418 0 0 20498 0 0 11450 0 0 19550 0 0 15957 0 0 23211 0 0 18590 0 0 20648 0 0 22334 0 0 21583 0 0 19941 0 0 20258 0 0 11231 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 125590000 125590000 0 0 NaN 3693 2031 1166 1166 2691 2848;2849 3055;3056 3401;3402 3056 3402 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9003 3056 3402 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9003 3056 3402 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9003 Q9NTM9 17 Q9NTM9 Q9NTM9 Copper homeostasis protein cutC homolog CUTC sp|Q9NTM9|CUTC_HUMAN Copper homeostasis protein cutC homolog OS=Homo sapiens GN=CUTC PE=1 SV=1 1 63.3202 0.0151126 63.32 37.883 63.32 1 S KRQGASSERKRARIPSGKAGAANGFLMEVCV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX ARIPS(1)GK ARIPS(63.32)GK 5 3 0.90447 54422 0 0 23628 0 0 56570 0 0 21529 0 0 51572 0 0 53479 0 0 51527 0 0 44698 0 0 24100 0 0 2442.6 0 0 51505 0 0 22309 0 0 56778 0 0 22747 0 0 52604 0 0 52073 0 0 51701 0 0 45249 0 0 24943 0 0 3334.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 39832000 39832000 0 0 NaN 3694 2033 17 17 419 448 483 539 483 539 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9365 483 539 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9365 483 539 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9365 Q9NTZ6 413 Q9NTZ6 Q9NTZ6 RNA-binding protein 12 RBM12 sp|Q9NTZ6|RBM12_HUMAN RNA-binding protein 12 OS=Homo sapiens GN=RBM12 PE=1 SV=1 0.983104 17.7231 0.000157944 133.05 94.747 133.05 1 S SGQTHPPPQTLPRSKSPSGQKRSRSRSPHEA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX SKS(0.983)PS(0.017)GQK S(-35.32)KS(17.72)PS(-17.72)GQK 3 3 -0.09716 53187 0 0 56205 0 0 53570 0 0 55192 0 0 39885 0 0 47602 0 0 44179 0 0 49723 0 0 61970 0 0 6680.7 0 0 50330 0 0 53089 0 0 53761 0 0 56609 0 0 41361 0 0 48091 0 0 45252 0 0 49995 0 0 60391 0 0 7441.5 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 421930000 421930000 0 0 NaN 3695 2034 413 413 3906;3907 4164;4165 4444;4445 4941;4942 4444 4941 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6514 4444 4941 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6514 4444 4941 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6514 Q9NTZ6 424 Q9NTZ6 Q9NTZ6 RNA-binding protein 12 RBM12 sp|Q9NTZ6|RBM12_HUMAN RNA-binding protein 12 OS=Homo sapiens GN=RBM12 PE=1 SV=1 1 66.9965 2.15558E-05 133.48 99.597 133.48 1 S PRSKSPSGQKRSRSRSPHEAGFCVYLKGLPF X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(1)PHEAGFCVYLK S(67)PHEAGFCVY(-67)LK 1 3 0.065679 6756.6 0 0 7786.7 0 0 7122.7 0 0 8149.4 0 0 7648.7 0 0 6731.8 0 0 9791.7 0 0 9858.2 0 0 7503.5 0 0 22357 0 0 6394.9 0 0 7357.9 0 0 7161.6 0 0 8322.6 0 0 7759 0 0 6892.2 0 0 9801.6 0 0 10441 0 0 7500.7 0 0 21280 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28317000 28317000 0 0 NaN 3696 2034 424 424 4117 4390 4681 5197 4681 5197 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18167 4681 5197 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18167 4681 5197 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18167 Q9NU19 154 Q9NU19 Q9NU19 TBC1 domain family member 22B TBC1D22B sp|Q9NU19|TB22B_HUMAN TBC1 domain family member 22B OS=Homo sapiens GN=TBC1D22B PE=1 SV=3 1 81.723 0.00718008 81.723 68.767 81.723 1 S NSSDTCLRNPLHKQQSLPLRPIIPLVARISD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX QQS(1)LPLRPIIPLVAR QQS(81.72)LPLRPIIPLVAR 3 3 -0.29588 4676.7 0 0 3562.5 0 0 4123.4 0 0 4412.4 0 0 2987 0 0 4233.6 0 0 3179 0 0 3979.1 0 0 4110.5 0 0 6855.9 0 0 4423.3 0 0 3370.2 0 0 4170.3 0 0 4475.8 0 0 3101.9 0 0 4261.2 0 0 3252.3 0 0 4207.8 0 0 4016.3 0 0 6547.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25289000 25289000 0 0 NaN 3697 2035 154 154 3120 3310 3540 3924 3540 3924 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22470 3540 3924 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22470 3540 3924 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22470 Q9NU22 5096 Q9NU22 Q9NU22 Midasin MDN1 sp|Q9NU22|MDN1_HUMAN Midasin OS=Homo sapiens GN=MDN1 PE=1 SV=2 0.985287 18.2586 0.0158138 66.262 28.241 66.262 1 S IAQLASQKHTRKNTQSFKRKPGQADNERSMG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX KNT(0.015)QS(0.985)FK KNT(-18.26)QS(18.26)FK 5 3 0.25161 51088 0 0 42539 0 0 51244 0 0 43215 0 0 38100 0 0 48903 0 0 41303 0 0 44311 0 0 49617 0 0 4059 0 0 48343 0 0 40189 0 0 51436 0 0 44422 0 0 39494 0 0 48714 0 0 42117 0 0 44747 0 0 48604 0 0 4847.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 92085000 92085000 0 0 NaN 3698 2036 5096 5096 2149 2271 2445 2722 2445 2722 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9809 2445 2722 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9809 2445 2722 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9809 Q9NUJ3 56 Q9NUJ3 Q9NUJ3 T-complex protein 11-like protein 1 TCP11L1 sp|Q9NUJ3|T11L1_HUMAN T-complex protein 11-like protein 1 OS=Homo sapiens GN=TCP11L1 PE=1 SV=1 0.742191 4.59218 0.0310388 48.998 33.732 48.998 1 S KSDSSSPQRVQRPHSSPPRFVTVEELLETAR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX VQRPHS(0.258)S(0.742)PPR VQRPHS(-4.59)S(4.59)PPR 7 3 -0.2782 5297.8 0 0 5322.4 0 0 6193.6 0 0 5672.3 0 0 5115.5 0 0 6211 0 0 5189.9 0 0 6885 0 0 5443.6 0 0 2853.2 0 0 5016.4 0 0 5029.9 0 0 6172.1 0 0 5811.5 0 0 5256.2 0 0 6215.4 0 0 5286.3 0 0 6966 0 0 5360.5 0 0 2845.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5576700 5576700 0 0 NaN 3699 2037 56 56 5227 5572 5940 6604 5940 6604 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5402 5940 6604 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5402 5940 6604 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5402 Q9NUL3 416 Q9NUL3 Q9NUL3 Double-stranded RNA-binding protein Staufen homolog 2 STAU2 sp|Q9NUL3|STAU2_HUMAN Double-stranded RNA-binding protein Staufen homolog 2 OS=Homo sapiens GN=STAU2 PE=1 SV=1 0.999922 41.1884 0.0104442 72.99 52.563 72.99 1 S FPEPTNNTPKGILHLSPDVYQEMEASRHKVI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPXXXX GILHLS(1)PDVYQEMEASR GILHLS(41.19)PDVY(-41.19)QEMEAS(-57.84)R 6 3 -0.080433 4437.5 0 0 4529.6 0 0 4587.7 0 0 4701.5 0 0 4790.9 0 0 4182 0 0 3969.7 0 0 5441.7 0 0 4809.6 0 0 27785 0 0 4199.5 0 0 4280 0 0 4611.8 0 0 4808.5 0 0 4839 0 0 4283.2 0 0 4103.2 0 0 6246.8 0 0 4710 0 0 26289 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6763500 6763500 0 0 NaN 3700 2038 416 416 1471 1548 1670 1850 1670 1850 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21028 1670 1850 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21028 1670 1850 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21028 Q9NUL3 485 Q9NUL3 Q9NUL3 Double-stranded RNA-binding protein Staufen homolog 2 STAU2 sp|Q9NUL3|STAU2_HUMAN Double-stranded RNA-binding protein Staufen homolog 2 OS=Homo sapiens GN=STAU2 PE=1 SV=1 0.588347 1.6389 6.70149E-08 172.93 142.95 172.93 1 S MNGTSSTAEAIGLKGSSPTPPCSPVQPSKQL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPXX GS(0.588)S(0.403)PT(0.008)PPCSPVQPSK GS(1.64)S(-1.64)PT(-18.53)PPCS(-96.21)PVQPS(-162.44)K 2 3 0.027 17462 0 0 20425 0 0 20528 0 0 23850 0 0 12904 0 0 19904 0 0 12963 0 0 19202 0 0 21821 0 0 6551.8 0 0 16535 0 0 19314 0 0 20401 0 0 24216 0 0 13554 0 0 20131 0 0 13435 0 0 19486 0 0 21155 0 0 6613.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 31841000 31841000 0 0 NaN 3701 2038 485 485 1639 1726;1727 1866 2079 1866 2079 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11174 1866 2079 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11174 1866 2079 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11174 Q9NUL3 492 Q9NUL3 Q9NUL3 Double-stranded RNA-binding protein Staufen homolog 2 STAU2 sp|Q9NUL3|STAU2_HUMAN Double-stranded RNA-binding protein Staufen homolog 2 OS=Homo sapiens GN=STAU2 PE=1 SV=1 0.999604 34.4139 0.00862857 90.718 70.337 90.718 2 S AEAIGLKGSSPTPPCSPVQPSKQLEYLARIQ X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPXXXXXXXXX GS(0.014)S(0.081)PT(0.905)PPCS(1)PVQPSK GS(-18.13)S(-10.48)PT(10.48)PPCS(34.41)PVQPS(-34.41)K 9 3 -0.4237 0 19238 0 0 17882 0 0 24126 0 0 19381 0 0 21121 0 0 21324 0 0 20165 0 0 19868 0 0 19882 0 0 6093.1 0 0 18222 0 0 16901 0 0 23974 0 0 19840 0 0 21597 0 0 21281 0 0 20564 0 0 20170 0 0 19630 0 0 6197.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 28873000 0 28873000 0 NaN 3702 2038 492 492 1639 1726;1727 1865 2078 1865 2078 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10193 1865 2078 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10193 1865 2078 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10193 Q9NUL7 524 Q9NUL7 Q9NUL7 Probable ATP-dependent RNA helicase DDX28 DDX28 sp|Q9NUL7|DDX28_HUMAN Probable ATP-dependent RNA helicase DDX28 OS=Homo sapiens GN=DDX28 PE=1 SV=2 0.999998 56.4586 0.000323435 111.93 60.834 111.93 1 S VSLVQKIELAARRRRSLPGLASSVKEPLPQA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPXXXXXX S(1)LPGLASSVK S(56.46)LPGLAS(-56.46)S(-76.85)VK 1 2 0.96608 18644 0 0 10935 0 0 19074 0 0 10120 0 0 16736 0 0 18048 0 0 18071 0 0 15083 0 0 10801 0 0 10966 0 0 17644 0 0 10325 0 0 19156 0 0 10568 0 0 17134 0 0 17720 0 0 18131 0 0 15575 0 0 10965 0 0 10675 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12663000 12663000 0 0 NaN 3703 2039 524 524 3960 4219 4502 5004 4502 5004 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18197 4502 5004 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18197 4502 5004 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18197 Q9NUQ3 97 Q9NUQ3 Q9NUQ3 Gamma-taxilin TXLNG sp|Q9NUQ3|TXLNG_HUMAN Gamma-taxilin OS=Homo sapiens GN=TXLNG PE=1 SV=2 0.99982 37.44 1.73491E-07 170.09 142.07 170.09 1 S EDEGSDFITENRNLVSPAYCTQESREEIPGG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX NLVS(1)PAYCTQESR NLVS(37.44)PAY(-86.95)CT(-37.44)QES(-82.22)R 4 2 0.74166 16487 0 0 21326 0 0 14860 0 0 17128 0 0 10639 0 0 14579 0 0 11721 0 0 14952 0 0 20995 0 0 11981 0 0 15595 0 0 20122 0 0 15007 0 0 17802 0 0 11070 0 0 14754 0 0 12133 0 0 15345 0 0 20322 0 0 11628 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12967000 12967000 0 0 NaN 3704 2040 97 97 2869 3040 3255 3611 3255 3611 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12860 3255 3611 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12860 3255 3611 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12860 Q9NV56 195 Q9NV56 Q9NV56 MRG/MORF4L-binding protein MRGBP sp|Q9NV56|MRGBP_HUMAN MRG/MORF4L-binding protein OS=Homo sapiens GN=MRGBP PE=1 SV=1 0.97298 16.0375 0.000109745 114.21 93.649 114.21 1 S SRVTDKVLTANSNPSSPSAAKRRRT______ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPXXXXXXXXXX VLTANSNPS(0.003)S(0.973)PS(0.024)AAK VLT(-80.23)ANS(-70.11)NPS(-25.43)S(16.04)PS(-16.04)AAK 10 3 -1.2441 25975 0 0 23685 0 0 25981 0 0 24468 0 0 23289 0 0 26402 0 0 20221 0 0 24294 0 0 23597 0 0 19355 0 0 24579 0 0 22378 0 0 26122 0 0 25106 0 0 23753 0 0 26387 0 0 20823 0 0 25034 0 0 23140 0 0 18787 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 29621000 29621000 0 0 NaN 3705 2043 195 195 5182 5521 5883 6538;6539 5883 6539 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12764 5883 6539 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12764 5883 6539 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12764 Q9NV70 473 Q9NV70 Q9NV70 Exocyst complex component 1 EXOC1 sp|Q9NV70|EXOC1_HUMAN Exocyst complex component 1 OS=Homo sapiens GN=EXOC1 PE=1 SV=4 0.69602 5.22085 6.63585E-10 202 122.51 202 1 S ESLHGSSGKLTGSTSSLNKLSVQSSGNRRSQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX LTGS(0.001)T(0.094)S(0.209)S(0.696)LNK LT(-73.87)GS(-30.41)T(-8.69)S(-5.22)S(5.22)LNK 7 2 0.12856 63791 0 0 44763 0 0 68203 0 0 45380 0 0 62098 0 0 64250 0 0 65467 0 0 58611 0 0 50077 0 0 9615.1 0 0 60379 0 0 42290 0 0 68355 0 0 46860 0 0 63411 0 0 63506 0 0 66056 0 0 59299 0 0 50064 0 0 10410 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 51967000 51967000 0 0 NaN 3706 2044 473 473 2623 2770 2970 3307 2970 3307 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12849 2970 3307 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12849 2970 3307 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12849 Q9NVI1 407 Q9NVI1 Q9NVI1 Fanconi anemia group I protein FANCI sp|Q9NVI1|FANCI_HUMAN Fanconi anemia group I protein OS=Homo sapiens GN=FANCI PE=1 SV=4 0.965421 14.6544 1.95249E-09 179.95 126.52 179.95 1 S SYGPKKVLDGKTIETSPSLSRMPNQHACKLG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX TIET(0.033)S(0.965)PS(0.002)LSR T(-67)IET(-14.65)S(14.65)PS(-28.03)LS(-60.9)R 5 2 -3.8972 27656 0 0 49281 0 0 32059 0 0 45515 0 0 34469 0 0 29451 0 0 34646 0 0 36533 0 0 49473 0 0 8441 0 0 26186 0 0 46533 0 0 32058 0 0 46705 0 0 34853 0 0 30341 0 0 35664 0 0 36625 0 0 48186 0 0 8793.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 45298000 45298000 0 0 NaN 3707 2045 407 407 4746 5061 5393 5996 5393 5996 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11130 5393 5996 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11130 5393 5996 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11130 Q9NVP1 86 Q9NVP1 Q9NVP1 ATP-dependent RNA helicase DDX18 DDX18 sp|Q9NVP1|DDX18_HUMAN ATP-dependent RNA helicase DDX18 OS=Homo sapiens GN=DDX18 PE=1 SV=2 0.891151 9.13127 0.0108546 73.951 13.849 73.951 1 S GGMSQEAVGNIKVTKSPQKSTVLTNGEAAMQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX VT(0.109)KS(0.891)PQK VT(-9.13)KS(9.13)PQK 4 3 -0.13872 73899 0 0 46319 0 0 73863 0 0 52717 0 0 32386 0 0 66626 0 0 25208 0 0 49267 0 0 55546 0 0 2572.1 0 0 69928 0 0 43793 0 0 73856 0 0 53961 0 0 35242 0 0 65949 0 0 26835 0 0 50169 0 0 53521 0 0 3562.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 375980000 375980000 0 0 NaN 3708 2047 86 86 5293 5640 6012 6678 6012 6678 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8717 6012 6678 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8717 6012 6678 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8717 Q9NVS9 241 Q9NVS9 Q9NVS9 Pyridoxine-5'-phosphate oxidase PNPO sp|Q9NVS9|PNPO_HUMAN Pyridoxine-5'-phosphate oxidase OS=Homo sapiens GN=PNPO PE=1 SV=1 0.999622 34.2697 0.00148166 97.713 81.574 97.713 1 S LHDRIVFRRGLPTGDSPLGPMTHRGEEDWLY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPXXXXXXX GLPTGDS(1)PLGPMTHR GLPT(-34.27)GDS(34.27)PLGPMT(-53.76)HR 7 3 1.0733 5935.2 0 0 7447.9 0 0 5783.2 0 0 6904.9 0 0 7923.9 0 0 6878.7 0 0 6918.5 0 0 6175.4 0 0 8145.6 0 0 3674.7 0 0 5615.6 0 0 7032.7 0 0 5856.4 0 0 7122.5 0 0 7901.7 0 0 6894.1 0 0 7124.4 0 0 6332.3 0 0 7985.2 0 0 3603.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6588200 6588200 0 0 NaN 3709 2048 241 241 1508 1588 1717 1909 1717 1909 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15550 1717 1909 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15550 1717 1909 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15550 Q9NVW2 228 Q9NVW2 Q9NVW2 E3 ubiquitin-protein ligase RLIM RLIM sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3 0.499999 0 0.00862897 76.378 38.002 76.378 1 S SRSPDHRRTRARAERSRSPLHPMSEIPRRSH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX S(0.5)RS(0.5)PLHPMSEIPR S(0)RS(0)PLHPMS(-53.15)EIPR 1 3 0.20014 8045.9 0 0 8727 0 0 8611.6 0 0 8169.8 0 0 8910.4 0 0 8878 0 0 9119.6 0 0 9235.5 0 0 9732.2 0 0 3804.6 0 0 7615.6 0 0 8240.9 0 0 8642.9 0 0 8433.8 0 0 9028.2 0 0 8878.9 0 0 9289.7 0 0 9364.7 0 0 9576.8 0 0 3796.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10328000 10328000 0 0 NaN 3710 2050 228 228 4293 4577 4877 5414 4877 5414 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11988 4877 5414 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11988 4877 5414 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11988 Q9NVW2 230 Q9NVW2 Q9NVW2 E3 ubiquitin-protein ligase RLIM RLIM sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3 0.499999 0 0.00862897 76.378 38.002 76.378 1 S SPDHRRTRARAERSRSPLHPMSEIPRRSHHS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.5)RS(0.5)PLHPMSEIPR S(0)RS(0)PLHPMS(-53.15)EIPR 3 3 0.20014 8045.9 0 0 8727 0 0 8611.6 0 0 8169.8 0 0 8910.4 0 0 8878 0 0 9119.6 0 0 9235.5 0 0 9732.2 0 0 3804.6 0 0 7615.6 0 0 8240.9 0 0 8642.9 0 0 8433.8 0 0 9028.2 0 0 8878.9 0 0 9289.7 0 0 9364.7 0 0 9576.8 0 0 3796.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10328000 10328000 0 0 NaN 3711 2050 230 230 4293 4577 4877 5414 4877 5414 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11988 4877 5414 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11988 4877 5414 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11988 Q9NVZ3 181 Q9NVZ3 Q9NVZ3 Adaptin ear-binding coat-associated protein 2 NECAP2 sp|Q9NVZ3|NECP2_HUMAN Adaptin ear-binding coat-associated protein 2 OS=Homo sapiens GN=NECAP2 PE=1 SV=1 0.728653 4.64824 0.00460137 88.976 73.132 88.976 1 S KKKEGAAGNPRVRPASTGGLSLLPPPPGGKT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPX VRPAS(0.729)T(0.25)GGLS(0.021)LLPPPPGGK VRPAS(4.65)T(-4.65)GGLS(-15.3)LLPPPPGGK 5 3 0.060739 5100.8 0 0 6449.3 0 0 5691.5 0 0 4640 0 0 5764.2 0 0 5892.8 0 0 5195.5 0 0 5767.8 0 0 5327.5 0 0 14323 0 0 4828.8 0 0 6082.1 0 0 5696.9 0 0 4894.7 0 0 5837.3 0 0 5876.1 0 0 5319.5 0 0 6222 0 0 5251 0 0 13620 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27237000 27237000 0 0 NaN 3712 2051 181 181 5234 5579 5947 6611 5947 6611 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18837 5947 6611 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18837 5947 6611 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18837 Q9NW64 142 Q9NW64 Q9NW64 Pre-mRNA-splicing factor RBM22 RBM22 sp|Q9NW64|RBM22_HUMAN Pre-mRNA-splicing factor RBM22 OS=Homo sapiens GN=RBM22 PE=1 SV=1 0.883447 12.788 2.14741E-09 176.62 128.72 176.62 1 S NSDGTRPVGMLGKATSTSDMLLKLARTTPYY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX AT(0.024)S(0.883)T(0.046)S(0.046)DMLLK AT(-15.74)S(12.79)T(-12.79)S(-12.79)DMLLK 3 2 -2.1819 20082 0 0 25113 0 0 21580 0 0 24565 0 0 28474 0 0 20785 0 0 31198 0 0 27438 0 0 27210 0 0 14628 0 0 19008 0 0 23721 0 0 21733 0 0 25195 0 0 28523 0 0 21113 0 0 31517 0 0 27705 0 0 27017 0 0 14409 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14959000 14959000 0 0 NaN 3713 2052 142 142 542 576 617 689 617 689 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17545 617 689 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17545 617 689 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17545 Q9NWB6 77 Q9NWB6 Q9NWB6 Arginine and glutamate-rich protein 1 ARGLU1 sp|Q9NWB6|ARGL1_HUMAN Arginine and glutamate-rich protein 1 OS=Homo sapiens GN=ARGLU1 PE=1 SV=1 0.91393 10.2606 4.25689E-07 151.39 119.56 151.39 1 S NTAVSRRERDRERASSPPDRIDIFGRTVSKR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX AS(0.086)S(0.914)PPDRIDIFGR AS(-10.26)S(10.26)PPDRIDIFGR 3 3 -0.2746 20237 0 0 13592 0 0 22044 0 0 13727 0 0 21027 0 0 20673 0 0 22553 0 0 18203 0 0 14263 0 0 5492.8 0 0 19156 0 0 12841 0 0 22084 0 0 14198 0 0 21412 0 0 20391 0 0 22657 0 0 18520 0 0 14425 0 0 5593.4 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 262100000 262100000 0 0 NaN 3714 2053 77 77 506 537 577 643;644 577 643 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17106 577 643 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17106 577 643 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17106 Q9NWB6 94 Q9NWB6 Q9NWB6 Arginine and glutamate-rich protein 1 ARGLU1 sp|Q9NWB6|ARGL1_HUMAN Arginine and glutamate-rich protein 1 OS=Homo sapiens GN=ARGLU1 PE=1 SV=1 0.927324 11.0584 0.0233692 69.65 9.5481 69.65 1 S PDRIDIFGRTVSKRSSLDEKQKREEEEKKAE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX RS(0.073)S(0.927)LDEK RS(-11.06)S(11.06)LDEK 3 2 0.18422 22914 0 0 13554 0 0 22724 0 0 14916 0 0 20606 0 0 22570 0 0 20136 0 0 18992 0 0 15265 0 0 4840.6 0 0 21682 0 0 12812 0 0 22866 0 0 15355 0 0 21024 0 0 22245 0 0 20386 0 0 19335 0 0 15269 0 0 4997.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11317000 11317000 0 0 NaN 3715 2053 94 94 3497 3714 3960 4398 3960 4398 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7295 3960 4398 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7295 3960 4398 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7295 Q9NWH9 289 Q9NWH9 Q9NWH9 SAFB-like transcription modulator SLTM sp|Q9NWH9|SLTM_HUMAN SAFB-like transcription modulator OS=Homo sapiens GN=SLTM PE=1 SV=2 1 125.523 7.99021E-11 197.85 152.71 125.52 1 S SEASKPKDGQDAIAQSPEKESKDYEMNANHK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPXXXXXXXXX DGQDAIAQS(1)PEK DGQDAIAQS(125.52)PEK 9 3 2.1114 122530 0 0 148560 0 0 135990 0 0 153430 0 0 143770 0 0 128980 0 0 145820 0 0 146010 0 0 167150 0 0 23178 0 0 116000 0 0 140360 0 0 136260 0 0 156840 0 0 145490 0 0 130630 0 0 148920 0 0 146500 0 0 164020 0 0 25204 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 417000000 417000000 0 0 NaN 3716 2054 289 289 686;687 730;731 778;779 860;861 778 860 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9814 779 861 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9940 779 861 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9940 Q9NWH9 590 Q9NWH9 Q9NWH9 SAFB-like transcription modulator SLTM sp|Q9NWH9|SLTM_HUMAN SAFB-like transcription modulator OS=Homo sapiens GN=SLTM PE=1 SV=2 1 70.4116 0.012075 70.412 18.244 70.412 1 S RYEKIHGRSKEKERASLDKKRDKDYRRKEIL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX ERAS(1)LDK ERAS(70.41)LDK 4 3 0.41273 40307 0 0 42731 0 0 38322 0 0 43044 0 0 34307 0 0 37976 0 0 31699 0 0 39137 0 0 45377 0 0 2230.1 0 0 38133 0 0 40369 0 0 38648 0 0 44096 0 0 35028 0 0 38310 0 0 32767 0 0 39280 0 0 44193 0 0 3005.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 46767000 46767000 0 0 NaN 3717 2054 590 590 1111 1170 1259 1385 1259 1385 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8026 1259 1385 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8026 1259 1385 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8026 Q9NWH9 550 Q9NWH9 Q9NWH9 SAFB-like transcription modulator SLTM sp|Q9NWH9|SLTM_HUMAN SAFB-like transcription modulator OS=Homo sapiens GN=SLTM PE=1 SV=2 0.451349 0.969498 3.13203E-05 129.85 108.65 129.85 S QTSESIKKSEEKKRISSKSPGHMVILDQTKG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;Oxidation (M);X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPX IS(0.451)S(0.361)KS(0.188)PGHMVILDQTK IS(0.97)S(-0.97)KS(-3.81)PGHMVILDQT(-53.46)K 2 3 0.16736 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3718 2054 550 550 1950 2061 2224 2485 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16209 2224 2485 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16209 2224 2485 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16209 Q9NWH9 553 Q9NWH9 Q9NWH9 SAFB-like transcription modulator SLTM sp|Q9NWH9|SLTM_HUMAN SAFB-like transcription modulator OS=Homo sapiens GN=SLTM PE=1 SV=2 1 155.833 1.98831E-16 235.93 188.02 235.93 1 S ESIKKSEEKKRISSKSPGHMVILDQTKGDHC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(1)PGHMVILDQTK S(155.83)PGHMVILDQT(-155.83)K 1 3 -0.031887 44658 0 0 63591 0 0 46874 0 0 64482 0 0 48281 0 0 45425 0 0 49173 0 0 52449 0 0 70639 0 0 9956.7 0 0 42266 0 0 60077 0 0 47091 0 0 65848 0 0 48945 0 0 46489 0 0 50599 0 0 52638 0 0 68789 0 0 10589 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 271490000 271490000 0 0 NaN 3719 2054 553 553 1950;4103 2061;4374;4375 4664;4665 5178;5179;5180 4665 5180 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15686 4665 5180 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15686 4665 5180 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15686 Q9NWH9 725 Q9NWH9 Q9NWH9 SAFB-like transcription modulator SLTM sp|Q9NWH9|SLTM_HUMAN SAFB-like transcription modulator OS=Homo sapiens GN=SLTM PE=1 SV=2 1 47.0971 0.0561142 47.097 23.067 47.097 1 S RRQQQQLRYEQEKRNSLKRPRDVDHRRDDPY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPXXXXXXXXXX NS(1)LKRPR NS(47.1)LKRPR 2 3 0.50615 16036 0 0 19260 0 0 15671 0 0 19103 0 0 23258 0 0 14359 0 0 22415 0 0 22368 0 0 21298 0 0 3260.4 0 0 15172 0 0 18193 0 0 15892 0 0 19548 0 0 23141 0 0 14711 0 0 22827 0 0 22225 0 0 21062 0 0 3587.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37997000 37997000 0 0 NaN 3720 2054 725 725 2918 3092 3312 3672 3312 3672 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6307 3312 3672 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6307 3312 3672 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6307 Q9NWT1 320 Q9NWT1 Q9NWT1 p21-activated protein kinase-interacting protein 1 PAK1IP1 sp|Q9NWT1|PK1IP_HUMAN p21-activated protein kinase-interacting protein 1 OS=Homo sapiens GN=PAK1IP1 PE=1 SV=2 0.995002 22.9909 0.00619997 84.468 59.748 84.468 1 S KVADMKESLPPAAEPSPVSKEQSKIGKKEPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPXXXXXXXXXXX ESLPPAAEPS(0.995)PVS(0.005)K ES(-66.1)LPPAAEPS(22.99)PVS(-22.99)K 10 3 2.8289 10178 0 0 9011.3 0 0 10876 0 0 8938.6 0 0 9028.8 0 0 9755.8 0 0 8122.4 0 0 9728.2 0 0 8990.8 0 0 5729.6 0 0 9633.9 0 0 8512.2 0 0 10887 0 0 9195.5 0 0 9259.6 0 0 9752.7 0 0 8335.2 0 0 9931.8 0 0 8834.4 0 0 5620.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17376000 17376000 0 0 NaN 3721 2055 320 320 1158 1219 1316 1455 1316 1455 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13818 1316 1455 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13818 1316 1455 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13818 Q9NWV8 29 Q9NWV8 Q9NWV8 BRISC and BRCA1-A complex member 1 BABAM1 sp|Q9NWV8|BABA1_HUMAN BRISC and BRCA1-A complex member 1 OS=Homo sapiens GN=BABAM1 PE=1 SV=1 0.888182 8.99992 9.20325E-05 119.04 74.279 119.04 1 S EEEEEHSAEPRPRTRSNPEGAEDRAVGAQAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX T(0.112)RS(0.888)NPEGAEDR T(-9)RS(9)NPEGAEDR 3 3 -1.968 2957.7 0 0 2905.9 0 0 3310.3 0 0 3153.2 0 0 2994.5 0 0 3872.2 0 0 4140.9 0 0 3422.7 0 0 2724.2 0 0 1372.8 0 0 2800 0 0 2746.5 0 0 3311.3 0 0 3234.1 0 0 3072.3 0 0 3846.2 0 0 4121.3 0 0 3492 0 0 2748.1 0 0 1371.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6394300 6394300 0 0 NaN 3722 2056 29 29 4902 5227 5569 6191 5569 6191 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5083 5569 6191 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5083 5569 6191 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5083 Q9NWW5 31 Q9NWW5 Q9NWW5 Ceroid-lipofuscinosis neuronal protein 6 CLN6 sp|Q9NWW5|CLN6_HUMAN Ceroid-lipofuscinosis neuronal protein 6 OS=Homo sapiens GN=CLN6 PE=1 SV=1 0.870591 8.27849 1.73073E-21 273.23 222.75 273.23 1 S PGAQLGASFLQARHGSVSADEAARTAPFHLD X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX HGS(0.871)VS(0.129)ADEAAR HGS(8.28)VS(-8.28)ADEAAR 3 2 0.18161 17560 0 0 3091.4 0 0 16224 0 0 3613.8 0 0 15559 0 0 18108 0 0 20556 0 0 14302 0 0 2586.1 0 0 3220 0 0 16611 0 0 2923.3 0 0 16415 0 0 3911.5 0 0 15882 0 0 17462 0 0 20192 0 0 14590 0 0 3313.9 0 0 3363 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 45262000 45262000 0 0 NaN 3723 2057 31 31 1716 1810 1955 2179 1955 2179 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5454 1955 2179 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5454 1955 2179 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5454 Q9NWW5 23 Q9NWW5 Q9NWW5 Ceroid-lipofuscinosis neuronal protein 6 CLN6 sp|Q9NWW5|CLN6_HUMAN Ceroid-lipofuscinosis neuronal protein 6 OS=Homo sapiens GN=CLN6 PE=1 SV=1 1 93.0537 4.19431E-06 136.49 106.4 136.49 1 S QHLGATGGPGAQLGASFLQARHGSVSADEAA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX QHLGATGGPGAQLGAS(1)FLQAR QHLGAT(-93.05)GGPGAQLGAS(93.05)FLQAR 16 3 1.177 6475.2 0 0 8173.6 0 0 6833.8 0 0 8372 0 0 8571.6 0 0 7684 0 0 7569.3 0 0 8767.3 0 0 9303 0 0 23242 0 0 6128.6 0 0 7722.5 0 0 6880 0 0 8572.9 0 0 8583.3 0 0 7790.1 0 0 7800.5 0 0 9452.6 0 0 9105.7 0 0 22088 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8238200 8238200 0 0 NaN 3724 2057 23 23 3044 3228 3453 3827 3453 3827 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17241 3453 3827 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17241 3453 3827 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17241 Q9NWZ5 56 Q9NWZ5 Q9NWZ5 Uridine-cytidine kinase-like 1 UCKL1 sp|Q9NWZ5|UCKL1_HUMAN Uridine-cytidine kinase-like 1 OS=Homo sapiens GN=UCKL1 PE=1 SV=2 0.993072 21.5639 1.95216E-07 157.7 134.1 157.7 1 S AESLDRLLPPVGTGRSPRKRTTSQCKSEPPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX LLPPVGT(0.007)GRS(0.993)PR LLPPVGT(-21.56)GRS(21.56)PR 10 3 -0.4009 12042 0 0 11250 0 0 12019 0 0 11682 0 0 7564.3 0 0 11803 0 0 7093.1 0 0 9288.4 0 0 11596 0 0 2726.6 0 0 11395 0 0 10630 0 0 12048 0 0 11970 0 0 7936.9 0 0 11799 0 0 7366.1 0 0 9496.5 0 0 11251 0 0 2782.4 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 20354000 20354000 0 0 NaN 3725 2058 56 56 2448 2586 2780 3106;3107 2780 3107 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14908 2780 3107 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14908 2780 3107 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14908 Q9NX40 108 Q9NX40 Q9NX40 OCIA domain-containing protein 1 OCIAD1 sp|Q9NX40|OCAD1_HUMAN OCIA domain-containing protein 1 OS=Homo sapiens GN=OCIAD1 PE=1 SV=1 1 91.6986 0.000111042 115.2 87.788 91.699 1 S SYVKTCQEKFKKLENSPLGEALRSGQARRSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX LENS(1)PLGEALR LENS(91.7)PLGEALR 4 2 -0.25013 22845 0 0 31117 0 0 24242 0 0 27970 0 0 20967 0 0 23626 0 0 22111 0 0 29224 0 0 32494 0 0 22182 0 0 21622 0 0 29377 0 0 24292 0 0 28841 0 0 21497 0 0 23988 0 0 22736 0 0 29765 0 0 31621 0 0 21564 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 50608000 50608000 0 0 NaN 3726 2059 108 108 2111;2332 2232;2465 2405;2654 2681;2966 2654 2966 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17400 2405 2681 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15518 2405 2681 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15518 Q9NX55 38 Q9NX55 Q9NX55 Huntingtin-interacting protein K HYPK sp|Q9NX55|HYPK_HUMAN Huntingtin-interacting protein K OS=Homo sapiens GN=HYPK PE=1 SV=2 1 81.3173 0.00750697 81.317 42.53 81.317 1 S TSGPERPPEKPRKHDSGAADLERVTDYAEEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX KHDS(1)GAADLER KHDS(81.32)GAADLER 4 3 0.70242 8819 0 0 11359 0 0 8605.2 0 0 11694 0 0 8433.7 0 0 9226.7 0 0 7988 0 0 9434.1 0 0 12035 0 0 2806.7 0 0 8344.2 0 0 10732 0 0 8674.3 0 0 11947 0 0 8566.1 0 0 9366.4 0 0 8263.3 0 0 9539.6 0 0 11703 0 0 2861.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6557600 6557600 0 0 NaN 3727 2060 38 38 2086 2206 2375 2645 2375 2645 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6954 2375 2645 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6954 2375 2645 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6954 Q9NX58 276 Q9NX58 Q9NX58 Cell growth-regulating nucleolar protein LYAR sp|Q9NX58|LYAR_HUMAN Cell growth-regulating nucleolar protein OS=Homo sapiens GN=LYAR PE=1 SV=2 1 100.183 1.35037E-10 210.02 171.86 171.46 1 S EEEAHVGAGKRKRRHSEVETDSKKKKMKLPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX RHS(1)EVETDSKK RHS(100.18)EVET(-100.18)DS(-129.84)KK 3 4 0.074429 32569 0 0 47233 0 0 34493 0 0 45726 0 0 63806 0 0 31808 0 0 70055 0 0 49543 0 0 45461 0 0 11365 0 0 30826 0 0 44611 0 0 34993 0 0 46818 0 0 63084 0 0 32748 0 0 70336 0 0 49350 0 0 45900 0 0 11848 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 135050000 135050000 0 0 NaN 3728 2061 276 276 3263;3264;3437 3461;3462;3650 3697;3698;3892 4104;4105;4320 3698 4105 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6024 3697 4104 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5540 3697 4104 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5540 Q9NX63 50 Q9NX63 Q9NX63 MICOS complex subunit MIC19 CHCHD3 sp|Q9NX63|MIC19_HUMAN MICOS complex subunit MIC19 OS=Homo sapiens GN=CHCHD3 PE=1 SV=1 0.999976 47.9042 2.8148E-07 163 127.77 163 1 S RMKESSPSGSKSQRYSGAYGASVSDEELKRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPXX YS(1)GAYGASVSDEELK Y(-47.9)S(47.9)GAY(-56.47)GAS(-52.95)VS(-107.15)DEELK 2 3 -4.3233 8520.3 0 0 7745.5 0 0 9777.8 0 0 7928.2 0 0 9851.7 0 0 9241.6 0 0 9042.5 0 0 9981.5 0 0 8868.2 0 0 9768.8 0 0 8067.1 0 0 7317.9 0 0 9772.8 0 0 8150.3 0 0 9981.5 0 0 9232.4 0 0 9238.6 0 0 10278 0 0 8757.6 0 0 9429.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10809000 10809000 0 0 NaN 3729 2062 50 50 5424 5777 6167 6863 6167 6863 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16293 6167 6863 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16293 6167 6863 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16293 Q9NXC5 766 Q9NXC5 Q9NXC5 WD repeat-containing protein mio MIOS sp|Q9NXC5|MIO_HUMAN WD repeat-containing protein mio OS=Homo sapiens GN=MIOS PE=1 SV=2 0.976758 16.2383 6.39535E-08 172.37 149.13 172.37 1 S VPHQGRGFSQYGVSGSPTKSKVTSCPGCRKP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX GFSQYGVSGS(0.977)PT(0.023)K GFS(-130.95)QY(-123.9)GVS(-47.52)GS(16.24)PT(-16.24)K 10 3 -0.18302 10089 0 0 15486 0 0 13077 0 0 14277 0 0 9001.5 0 0 13808 0 0 11291 0 0 12640 0 0 16320 0 0 5445.3 0 0 9557.9 0 0 14622 0 0 12950 0 0 14725 0 0 9412.5 0 0 13857 0 0 11521 0 0 12888 0 0 15890 0 0 5419.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 61187000 61187000 0 0 NaN 3730 2063 766 766 1424 1501 1610 1780 1610 1780 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14697 1610 1780 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14697 1610 1780 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14697 Q9NXE8 217 Q9NXE8 Q9NXE8 Pre-mRNA-splicing factor CWC25 homolog CWC25 sp|Q9NXE8|CWC25_HUMAN Pre-mRNA-splicing factor CWC25 homolog OS=Homo sapiens GN=CWC25 PE=1 SV=1 0.499413 0 0.000300315 113.86 67.83 113.86 S EDEHSAGRSQKKMANSSPVLSKVPGYGLQVR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX MANS(0.499)S(0.499)PVLS(0.001)K MANS(0)S(0)PVLS(-26.29)K 4 2 1.1254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3731 2064 217 217 2664 2813;2814 3019 3364 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13616 3019 3364 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13616 3019 3364 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13616 Q9NXE8 218 Q9NXE8 Q9NXE8 Pre-mRNA-splicing factor CWC25 homolog CWC25 sp|Q9NXE8|CWC25_HUMAN Pre-mRNA-splicing factor CWC25 homolog OS=Homo sapiens GN=CWC25 PE=1 SV=1 0.77285 5.37729 0.000300315 113.86 67.83 91.64 1 S DEHSAGRSQKKMANSSPVLSKVPGYGLQVRN X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX MANS(0.224)S(0.773)PVLS(0.003)K MANS(-5.38)S(5.38)PVLS(-23.98)K 5 2 1.6191 21682 0 0 19650 0 0 23313 0 0 20833 0 0 16692 0 0 23842 0 0 16078 0 0 19127 0 0 19371 0 0 24348 0 0 20523 0 0 18570 0 0 23298 0 0 21367 0 0 17325 0 0 23751 0 0 16486 0 0 20102 0 0 18973 0 0 23370 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9502100 9502100 0 0 NaN 3732 2064 218 218 2664 2813;2814 3018 3363 3018 3363 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11087 3019 3364 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13616 3019 3364 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13616 Q9NXH8 63 Q9NXH8 Q9NXH8 Torsin-4A TOR4A sp|Q9NXH8|TOR4A_HUMAN Torsin-4A OS=Homo sapiens GN=TOR4A PE=1 SV=2 0.999998 56.1331 1.50446E-05 130.53 112.88 130.53 1 S GGGPDVGTGAPRPGCSPRAPRADLDQPKFFT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX LLQPGGGPDVGTGAPRPGCS(1)PR LLQPGGGPDVGT(-56.13)GAPRPGCS(56.13)PR 20 3 -0.99763 16809 0 0 14242 0 0 15836 0 0 14767 0 0 18184 0 0 15601 0 0 14073 0 0 14775 0 0 13192 0 0 12932 0 0 15902 0 0 13457 0 0 16023 0 0 15143 0 0 18256 0 0 15615 0 0 14499 0 0 15242 0 0 13053 0 0 12519 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 51681000 51681000 0 0 NaN 3733 2065 63 63 2454 2592 2786 3113 2786 3113 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14359 2786 3113 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14359 2786 3113 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14359 Q9NXH9 625 Q9NXH9 Q9NXH9 tRNA (guanine(26)-N(2))-dimethyltransferase TRMT1 sp|Q9NXH9|TRM1_HUMAN tRNA (guanine(26)-N(2))-dimethyltransferase OS=Homo sapiens GN=TRMT1 PE=1 SV=1 0.992321 23.2557 8.37963E-07 140.63 125.24 140.63 1 S KEGTCQRGDQCCYSHSPPTPRVSADAAPDCP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPXXXXXXXXXX GDQCCYS(0.003)HS(0.992)PPT(0.005)PR GDQCCY(-73.95)S(-25.21)HS(23.26)PPT(-23.26)PR 9 3 -0.65441 11422 0 0 13640 0 0 11431 0 0 15204 0 0 16386 0 0 11219 0 0 15524 0 0 15158 0 0 14665 0 0 4147.3 0 0 10809 0 0 12894 0 0 11569 0 0 15451 0 0 16323 0 0 11481 0 0 15820 0 0 15177 0 0 14507 0 0 4256 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 42037000 42037000 0 0 NaN 3734 2066 625 625 1393 1469 1578 1743 1578 1743 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7080 1578 1743 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7080 1578 1743 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7080 Q9NXR1 306 Q9NXR1 Q9NXR1 Nuclear distribution protein nudE homolog 1 NDE1 sp|Q9NXR1|NDE1_HUMAN Nuclear distribution protein nudE homolog 1 OS=Homo sapiens GN=NDE1 PE=1 SV=2 0.797334 8.67772 0.00435944 90.334 49.392 90.334 1 S SGRSSKNRDGGERRPSSTSVPLGDKGLGKRL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX RPS(0.797)S(0.108)T(0.071)S(0.023)VPLGDK RPS(8.68)S(-8.68)T(-10.5)S(-15.32)VPLGDK 3 3 2.0668 22236 0 0 14434 0 0 18143 0 0 14188 0 0 17133 0 0 20215 0 0 17803 0 0 16918 0 0 16425 0 0 3226.8 0 0 21025 0 0 13634 0 0 18494 0 0 14680 0 0 17454 0 0 19958 0 0 18052 0 0 17195 0 0 16265 0 0 3430 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17388000 17388000 0 0 NaN 3735 2067 306 306 3415 3627 3869 4295 3869 4295 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11601 3869 4295 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11601 3869 4295 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11601 Q9NY27 159 Q9NY27 Q9NY27 Serine/threonine-protein phosphatase 4 regulatory subunit 2 PPP4R2 sp|Q9NY27|PP4R2_HUMAN Serine/threonine-protein phosphatase 4 regulatory subunit 2 OS=Homo sapiens GN=PPP4R2 PE=1 SV=3 0.880848 10.6812 0.0199481 68.845 53.306 68.845 1 S SNSLNRMNGVMFPGNSPSYTERSNINGPGTP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPXXXXXXXXX MNGVMFPGNS(0.881)PS(0.075)YT(0.044)ER MNGVMFPGNS(10.68)PS(-10.68)Y(-34.08)T(-13.06)ER 10 2 1.9643 6483.7 0 0 3378.5 0 0 5669.5 0 0 3258.9 0 0 6255.5 0 0 6764.7 0 0 5984.1 0 0 6744.1 0 0 2956.3 0 0 30744 0 0 6132.2 0 0 3190.9 0 0 5762.3 0 0 3409.8 0 0 6306.8 0 0 6681.8 0 0 6021.4 0 0 7692 0 0 3045.4 0 0 29105 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9434000 9434000 0 0 NaN 3736 2068 159 159 2716 2882 3091 3438 3091 3438 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18149 3091 3438 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18149 3091 3438 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18149 Q9NY27 224 Q9NY27 Q9NY27 Serine/threonine-protein phosphatase 4 regulatory subunit 2 PPP4R2 sp|Q9NY27|PP4R2_HUMAN Serine/threonine-protein phosphatase 4 regulatory subunit 2 OS=Homo sapiens GN=PPP4R2 PE=1 SV=3 0.907631 11.2942 1.29891E-07 152.66 137.02 152.66 1 S EKNHSDSSTSESEVSSVSPLKNKHPDEDAVE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPXXXXXXXXXX NHSDSSTSESEVS(0.067)S(0.908)VS(0.025)PLK NHS(-74.28)DS(-61.53)S(-58.93)T(-51.76)S(-51.76)ES(-41.06)EVS(-11.29)S(11.29)VS(-15.62)PLK 14 3 -0.5832 7302.9 0 0 7752.5 0 0 9047.3 0 0 8968.1 0 0 9997.9 0 0 12980 0 0 16149 0 0 13713 0 0 10928 0 0 14439 0 0 6916.9 0 0 7330.5 0 0 9033.1 0 0 9198.5 0 0 10172 0 0 12868 0 0 16000 0 0 14162 0 0 11005 0 0 13913 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21812000 21812000 0 0 NaN 3737 2068 224 224 2822 2992 3205 3558 3205 3558 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11217 3205 3558 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11217 3205 3558 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11217 Q9NY61 203 Q9NY61 Q9NY61 Protein AATF AATF sp|Q9NY61|AATF_HUMAN Protein AATF OS=Homo sapiens GN=AATF PE=1 SV=1 1 83.2101 5.80757E-09 174.98 153.85 174.98 1 S DSQGESEEDRAGDRNSEDDGVVMTFSSVKVS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPXX AGDRNS(1)EDDGVVMTFSSVK AGDRNS(83.21)EDDGVVMT(-83.21)FS(-123.16)S(-129.88)VK 6 3 -0.10472 17443 0 0 22714 0 0 17512 0 0 23213 0 0 14561 0 0 19398 0 0 18311 0 0 19755 0 0 21196 0 0 16448 0 0 16506 0 0 21460 0 0 17601 0 0 23743 0 0 15006 0 0 19650 0 0 18538 0 0 20298 0 0 20791 0 0 15945 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 32029000 32029000 0 0 NaN 3738 2069 203 203 191 199 214 240 214 240 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17966 214 240 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17966 214 240 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17966 Q9NYB0 36 Q9NYB0 Q9NYB0 Telomeric repeat-binding factor 2-interacting protein 1 TERF2IP sp|Q9NYB0|TE2IP_HUMAN Telomeric repeat-binding factor 2-interacting protein 1 OS=Homo sapiens GN=TERF2IP PE=1 SV=1 0.828611 11.7308 0.0484249 41.115 24.992 41.115 1 S FVRDDGSSMSFYVRPSPAKRRLSTLILHGGG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPXXXXXXXXXXXX DDGS(0.056)S(0.053)MS(0.047)FY(0.016)VRPS(0.829)PAK DDGS(-11.73)S(-11.98)MS(-12.46)FY(-17.07)VRPS(11.73)PAK 13 3 -1.5131 16549 0 0 25780 0 0 16897 0 0 25068 0 0 18549 0 0 18131 0 0 20288 0 0 24365 0 0 29356 0 0 15168 0 0 15661 0 0 24349 0 0 17018 0 0 25671 0 0 18759 0 0 18590 0 0 20816 0 0 24655 0 0 28581 0 0 14846 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22037000 22037000 0 0 NaN 3739 2070 36 36 655 698 744 824 744 824 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15695 744 824 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15695 744 824 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15695 Q9NYB0 154 Q9NYB0 Q9NYB0 Telomeric repeat-binding factor 2-interacting protein 1 TERF2IP sp|Q9NYB0|TE2IP_HUMAN Telomeric repeat-binding factor 2-interacting protein 1 OS=Homo sapiens GN=TERF2IP PE=1 SV=1 0.999528 33.7904 2.34046E-07 161.51 135.04 129.77 1 S ADDVAILTYVKENARSPSSVTGNALWKAMEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPXXXX S(1)PSSVTGNALWK S(33.79)PS(-33.79)S(-42.69)VT(-62.54)GNALWK 1 2 -0.7948 23740 0 0 33604 0 0 26533 0 0 30635 0 0 28411 0 0 27082 0 0 27199 0 0 33471 0 0 37832 0 0 37372 0 0 22475 0 0 31728 0 0 26577 0 0 31579 0 0 28713 0 0 27455 0 0 28036 0 0 34452 0 0 36878 0 0 35964 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 73014000 73014000 0 0 NaN 3740 2070 154 154 1067;4197 1125;4473 1213;4767 1334;5292 4767 5292 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18543 1213 1334 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15728 1213 1334 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15728 Q9NYB0 203 Q9NYB0 Q9NYB0 Telomeric repeat-binding factor 2-interacting protein 1 TERF2IP sp|Q9NYB0|TE2IP_HUMAN Telomeric repeat-binding factor 2-interacting protein 1 OS=Homo sapiens GN=TERF2IP PE=1 SV=1 0.998654 28.7125 1.0806E-10 193.64 154.01 193.64 1 S LRGQEHKYLLGDAPVSPSSQKLKRKAEEDPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPXXXXXXXXXX YLLGDAPVS(0.999)PS(0.001)SQK Y(-133.24)LLGDAPVS(28.71)PS(-28.71)S(-55.92)QK 9 3 0.31353 7917.4 0 0 8441.7 0 0 7895.7 0 0 8806.5 0 0 8215.8 0 0 7590.9 0 0 9847.2 0 0 7939.8 0 0 8218.4 0 0 6838.3 0 0 7491.8 0 0 7976.6 0 0 7958.8 0 0 9000.4 0 0 8340 0 0 7680.3 0 0 9900.7 0 0 8156.8 0 0 8178.2 0 0 6622.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 214840000 214840000 0 0 NaN 3741 2070 203 203 5395 5747 6134 6821 6134 6821 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18258 6134 6821 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18258 6134 6821 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18258 Q9NYF3 122 Q9NYF3 Q9NYF3 Protein FAM53C FAM53C sp|Q9NYF3|FA53C_HUMAN Protein FAM53C OS=Homo sapiens GN=FAM53C PE=1 SV=1 0.99966 34.69 2.24018E-06 155.24 111.15 155.24 1 S PVPPAPPSKRHCRSLSVPVDLSRWQPVWRPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX SLS(1)VPVDLSR S(-34.69)LS(34.69)VPVDLS(-68.78)R 3 2 0.092603 19927 0 0 16247 0 0 18491 0 0 16659 0 0 11429 0 0 18334 0 0 11302 0 0 15722 0 0 17329 0 0 11566 0 0 18850 0 0 15350 0 0 18615 0 0 17107 0 0 12019 0 0 18291 0 0 11675 0 0 16220 0 0 16843 0 0 11254 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21208000 21208000 0 0 NaN 3742 2071 122 122 4008 4273 4561 5069 4561 5069 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17900 4561 5069 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17900 4561 5069 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17900 Q9NYF8 385 Q9NYF8 Q9NYF8 Bcl-2-associated transcription factor 1 BCLAF1 sp|Q9NYF8|BCLF1_HUMAN Bcl-2-associated transcription factor 1 OS=Homo sapiens GN=BCLAF1 PE=1 SV=2 0.999862 38.5867 2.2321E-16 224.53 209.59 185.7 1 S RAEGEWEDQEALDYFSDKESGKQKFNDSEGD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XPPPPPPPPPPPPPPPPPPPPPXXXXXXXXX AEGEWEDQEALDYFS(1)DKESGK AEGEWEDQEALDY(-74.13)FS(38.59)DKES(-38.59)GK 15 3 -0.093171 9352.7 0 0 7604.9 0 0 9650.2 0 0 9085.5 0 0 8718.2 0 0 9131.4 0 0 9305 0 0 12857 0 0 9886.8 0 0 185860 0 0 8851.2 0 0 7192.5 0 0 9689.8 0 0 9239.1 0 0 8911.1 0 0 9547.5 0 0 9459.4 0 0 18352 0 0 9730.6 0 0 175300 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 71164000 71164000 0 0 NaN 3743 2072 385 385 139 145 156;157 175;176;177 156 175 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19789 157 177 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19981 157 177 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19981 Q9NYF8 512 Q9NYF8 Q9NYF8 Bcl-2-associated transcription factor 1 BCLAF1 sp|Q9NYF8|BCLF1_HUMAN Bcl-2-associated transcription factor 1 OS=Homo sapiens GN=BCLAF1 PE=1 SV=2 1 73.8716 7.7803E-07 140.16 116.83 140.16 1 S PEQVKSEKLKDLFDYSPPLHKNLDAREKSTF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPXXXXXXXXXX LKDLFDYS(1)PPLHK LKDLFDY(-73.87)S(73.87)PPLHK 8 4 -0.16764 20081 0 0 18643 0 0 20965 0 0 19729 0 0 15038 0 0 22178 0 0 16564 0 0 20215 0 0 22023 0 0 18058 0 0 19005 0 0 17618 0 0 20990 0 0 20230 0 0 15637 0 0 22130 0 0 16936 0 0 20897 0 0 21498 0 0 17472 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 88787000 88787000 0 0 NaN 3744 2072 512 512 734;2415 778;2552 829;2745 916;3065;3066 2745 3066 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22378 2745 3066 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22378 2745 3066 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22378 Q9NYF8 531 Q9NYF8 Q9NYF8 Bcl-2-associated transcription factor 1 BCLAF1 sp|Q9NYF8|BCLF1_HUMAN Bcl-2-associated transcription factor 1 OS=Homo sapiens GN=BCLAF1 PE=1 SV=2 1 88.1141 4.76682E-08 175.29 112.26 175.29 1 S HKNLDAREKSTFREESPLRIKMIASDSHRPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPXXXXXXXXXXXX STFREES(1)PLR S(-88.11)T(-99.03)FREES(88.11)PLR 7 3 0.1199 71420 0 0 71067 0 0 77897 0 0 72717 0 0 66598 0 0 72061 0 0 69969 0 0 70804 0 0 67661 0 0 16340 0 0 67606 0 0 67144 0 0 77934 0 0 74552 0 0 68296 0 0 72274 0 0 70997 0 0 71562 0 0 66859 0 0 17025 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 1438500000 1438500000 0 0 NaN 3745 2072 531 531 1019;4502 1075;4795 1162;5107 1280;5671;5672 5107 5671 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10123 5107 5671 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10123 5107 5671 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10123 Q9NYF8 496 Q9NYF8 Q9NYF8 Bcl-2-associated transcription factor 1 BCLAF1 sp|Q9NYF8|BCLF1_HUMAN Bcl-2-associated transcription factor 1 OS=Homo sapiens GN=BCLAF1 PE=1 SV=2 1 67.7228 5.40965E-10 209.77 142.22 209.77 1 S EDKNSERITVKKETQSPEQVKSEKLKDLFDY 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4.61095E-31 292.45 257.54 292.45 1 S DYFSDKESGKQKFNDSEGDDTEETEDYRQFR X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPXXX FNDS(0.924)EGDDT(0.076)EETEDYR FNDS(10.83)EGDDT(-10.83)EET(-71.81)EDY(-150.35)R 4 2 -0.045086 7810.3 0 0 7343 0 0 7808.7 0 0 6592.5 0 0 5538.9 0 0 8900.6 0 0 6127.3 0 0 7062.5 0 0 7995.9 0 0 8619.9 0 0 7390.6 0 0 6932.4 0 0 7836.4 0 0 6851.9 0 0 5765 0 0 8811.7 0 0 6260 0 0 7415.2 0 0 7810.3 0 0 8280.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16725000 16725000 0 0 NaN 3747 2072 397 397 1295 1366 1470 1630 1470 1630 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12410 1470 1630 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12410 1470 1630 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12410 Q9NYF8 658 Q9NYF8 Q9NYF8 Bcl-2-associated transcription factor 1 BCLAF1 sp|Q9NYF8|BCLF1_HUMAN Bcl-2-associated transcription factor 1 OS=Homo sapiens GN=BCLAF1 PE=1 SV=2 0.990945 20.4476 4.38233E-09 184.27 94.006 109.95 1 S STRQKSPEIHRRIDISPSTLRKHTRLAGEER X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX RIDIS(0.991)PS(0.009)TLR RIDIS(20.45)PS(-20.45)T(-39.33)LR 5 3 -0.38685 72359 0 0 76479 0 0 74650 0 0 76176 0 0 66733 0 0 75406 0 0 69595 0 0 73748 0 0 76402 0 0 21814 0 0 68479 0 0 72245 0 0 74945 0 0 78221 0 0 68235 0 0 75638 0 0 70890 0 0 74696 0 0 75097 0 0 22247 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 1118800000 1118800000 0 0 NaN 3748 2072 658 658 1794;1795;3274;3275 1894;1895;3474;3475 2041;2042;3711;3712 2276;2277;2278;4123;4124;4125 3711 4123 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14961 2041 2276 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17972 2041 2276 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17972 Q9NYF8 177 Q9NYF8 Q9NYF8 Bcl-2-associated transcription factor 1 BCLAF1 sp|Q9NYF8|BCLF1_HUMAN Bcl-2-associated transcription factor 1 OS=Homo sapiens GN=BCLAF1 PE=1 SV=2 1 152.939 4.0683E-07 152.94 107.08 152.94 1 S QEKQTKKAEGEPQEESPLKSKSQEEPKDTFE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPXXXXXXXXXX KAEGEPQEES(1)PLK KAEGEPQEES(152.94)PLK 10 4 -0.10272 44137 0 0 41684 0 0 56217 0 0 40847 0 0 38442 0 0 55948 0 0 41480 0 0 46592 0 0 47110 0 0 9266.9 0 0 41810 0 0 39372 0 0 55701 0 0 42234 0 0 40108 0 0 55305 0 0 42231 0 0 47377 0 0 46245 0 0 9491.1 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 1 0 0 117800000 117800000 0 0 NaN 3749 2072 177 177 1996;1997 2111;2112 2275;2276 2541;2542 2275 2541 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10588 2275 2541 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10588 2275 2541 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10588 Q9NYF8 648 Q9NYF8 Q9NYF8 Bcl-2-associated transcription factor 1 BCLAF1 sp|Q9NYF8|BCLF1_HUMAN Bcl-2-associated transcription factor 1 OS=Homo sapiens GN=BCLAF1 PE=1 SV=2 1 81.9717 3.48519E-06 151.78 125.37 81.972 1 S TSYQKATEEHSTRQKSPEIHRRIDISPSTLR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX S(1)PEIHRR S(81.97)PEIHRR 1 3 -0.56868 72575 0 0 65531 0 0 72360 0 0 63482 0 0 54744 0 0 70594 0 0 60497 0 0 64955 0 0 64011 0 0 34809 0 0 68673 0 0 61893 0 0 72670 0 0 65421 0 0 56679 0 0 70438 0 0 61401 0 0 66422 0 0 63011 0 0 34280 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 1122900000 1122900000 0 0 NaN 3750 2072 648 648 3059;3060;4091 3245;3246;4362 3472;3473;4652 3846;3847;5165 4652 5165 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5082 3473 3847 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5420 3473 3847 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5420 Q9NYF8 161 Q9NYF8 Q9NYF8 Bcl-2-associated transcription factor 1 BCLAF1 sp|Q9NYF8|BCLF1_HUMAN Bcl-2-associated transcription factor 1 OS=Homo sapiens GN=BCLAF1 PE=1 SV=2 1 61.3533 0.0283866 61.353 22.088 61.353 1 S SSSPYSKSPVSKRRGSQEKQTKKAEGEPQEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX RRGS(1)QEK RRGS(61.35)QEK 4 3 -0.13949 12226 0 0 9928.8 0 0 10225 0 0 9511.3 0 0 6696.7 0 0 8661.2 0 0 7884.9 0 0 9382.2 0 0 9092.6 0 0 2760.8 0 0 11561 0 0 9377 0 0 10370 0 0 9777.7 0 0 7022.1 0 0 8733.7 0 0 8002.1 0 0 9466.3 0 0 8920.5 0 0 2816.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 123270000 123270000 0 0 NaN 3751 2072 161 161 3435 3648 3890 4318 3890 4318 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4631 3890 4318 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4631 3890 4318 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4631 Q9NYF8 222 Q9NYF8 Q9NYF8 Bcl-2-associated transcription factor 1 BCLAF1 sp|Q9NYF8|BCLF1_HUMAN Bcl-2-associated transcription factor 1 OS=Homo sapiens GN=BCLAF1 PE=1 SV=2 0.999997 56.1252 3.66823E-16 231.52 202.88 231.52 1 S ATSGDIWPGLSAYDNSPRSPHSPSPIATPPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX SSATSGDIWPGLSAYDNS(1)PR S(-190.28)S(-190.28)AT(-175.31)S(-167.4)GDIWPGLS(-56.13)AY(-62.48)DNS(56.13)PR 18 2 0.16124 5285.2 0 0 3456.1 0 0 4524.4 0 0 3149.2 0 0 2776.5 0 0 6353.2 0 0 3138.7 0 0 4021.5 0 0 3524.5 0 0 25348 0 0 4998.3 0 0 3263.1 0 0 4578.8 0 0 3303.7 0 0 2926.3 0 0 6243.6 0 0 3188.1 0 0 4888 0 0 3461.2 0 0 23961 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20371000 20371000 0 0 NaN 3752 2072 222 222 4326 4612 4914 5458 4914 5458 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20194 4914 5458 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20194 4914 5458 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20194 Q9NYF8 760 Q9NYF8 Q9NYF8 Bcl-2-associated transcription factor 1 BCLAF1 sp|Q9NYF8|BCLF1_HUMAN Bcl-2-associated transcription factor 1 OS=Homo sapiens GN=BCLAF1 PE=1 SV=2 0.993863 22.8368 4.82961E-11 198.35 162.01 198.35 1 S EQDHSRSSSSSASPSSPSSREEKESKKEREE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPXXXXXXXX SSSSSASPS(0.005)S(0.994)PS(0.001)SREEK S(-96.73)S(-91.3)S(-76.88)S(-70.06)S(-56.13)AS(-54.84)PS(-22.84)S(22.84)PS(-30.3)S(-44.99)REEK 10 3 -0.66104 17190 0 0 10362 0 0 18114 0 0 8133.3 0 0 6388.5 0 0 18474 0 0 8311.4 0 0 13736 0 0 9926.9 0 0 2361.6 0 0 16269 0 0 9775.8 0 0 18047 0 0 8653.2 0 0 7204.1 0 0 18001 0 0 8412.2 0 0 14033 0 0 9726.4 0 0 2541.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 45931000 45931000 0 0 NaN 3753 2072 760 760 4466 4757 5063 5618 5063 5618 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5921 5063 5618 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5921 5063 5618 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5921 Q9NYF8 285 Q9NYF8 Q9NYF8 Bcl-2-associated transcription factor 1 BCLAF1 sp|Q9NYF8|BCLF1_HUMAN Bcl-2-associated transcription factor 1 OS=Homo sapiens GN=BCLAF1 PE=1 SV=2 0.998837 29.8311 2.22277E-08 175.02 156.19 175.02 2 S ERSGSGSVGNGSSRYSPSQNSPIHHIPSRRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPX YS(0.999)PS(0.001)QNS(1)PIHHIPSRR Y(-39.05)S(29.83)PS(-29.83)QNS(63.67)PIHHIPS(-63.67)RR 2 4 -0.071296 0 51815 0 0 47811 0 0 52225 0 0 49101 0 0 43836 0 0 60321 0 0 51173 0 0 55674 0 0 50968 0 0 19597 0 0 49032 0 0 45173 0 0 52475 0 0 50517 0 0 45084 0 0 59941 0 0 51732 0 0 56616 0 0 50299 0 0 19742 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 297060000 0 297060000 0 NaN 3754 2072 285 285 5436;5437 5789;5790;5791 6181;6182;6183 6880;6881;6882 6182 6881 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9346 6182 6881 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9346 6182 6881 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9346 Q9NYF8 290 Q9NYF8 Q9NYF8 Bcl-2-associated transcription factor 1 BCLAF1 sp|Q9NYF8|BCLF1_HUMAN Bcl-2-associated transcription factor 1 OS=Homo sapiens GN=BCLAF1 PE=1 SV=2 1 63.6709 2.22277E-08 175.02 156.19 175.02 1;2 S GSVGNGSSRYSPSQNSPIHHIPSRRSPAKTI X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPXXXXXX YS(0.999)PS(0.001)QNS(1)PIHHIPSRR Y(-39.05)S(29.83)PS(-29.83)QNS(63.67)PIHHIPS(-63.67)RR 7 4 -0.071296 10767 51815 0 9569.2 47811 0 10193 52225 0 9610.2 49101 0 7579.4 43836 0 13174 60321 0 9943.5 51173 0 11816 55674 0 9379.8 50968 0 4316.1 19597 0 10187 49032 0 9039.9 45173 0 10269 52475 0 9922.2 50517 0 7878.8 45084 0 13037 59941 0 9992.7 51732 0 12035 56616 0 9279 50299 0 4337.5 19742 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 320550000 23490000 297060000 0 NaN 3755 2072 290 290 5436;5437 5789;5790;5791 6180;6181;6182;6183 6879;6880;6881;6882 6182 6881 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9346 6182 6881 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9346 6182 6881 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9346 Q9NYI0 338 Q9NYI0 Q9NYI0 PH and SEC7 domain-containing protein 3 PSD3 sp|Q9NYI0|PSD3_HUMAN PH and SEC7 domain-containing protein 3 OS=Homo sapiens GN=PSD3 PE=1 SV=2 0.839045 7.17082 0.0233308 63.184 19.205 63.184 1 S ETSLQRTASPDSKESSKVPRHLISSAGLCNS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX ES(0.161)S(0.839)KVPR ES(-7.17)S(7.17)KVPR 3 2 0.23064 20846 0 0 22752 0 0 19285 0 0 25656 0 0 19196 0 0 17365 0 0 12776 0 0 16304 0 0 25056 0 0 7961.1 0 0 19720 0 0 21509 0 0 19496 0 0 26032 0 0 19407 0 0 17777 0 0 13649 0 0 16635 0 0 24202 0 0 7873.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24036000 24036000 0 0 NaN 3756 2073 338 338 1167 1228 1325 1464 1325 1464 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6480 1325 1464 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6480 1325 1464 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6480 Q9NYJ8 450 Q9NYJ8 Q9NYJ8 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 TAB2 sp|Q9NYJ8|TAB2_HUMAN TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 OS=Homo sapiens GN=TAB2 PE=1 SV=1 0.990717 20.3451 0.0103292 82.278 42.355 82.278 1 S HHPPKSRAIGNNSATSPRVVVTQPNTKYTFK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX AIGNNSAT(0.009)S(0.991)PR AIGNNS(-38.73)AT(-20.35)S(20.35)PR 9 2 1.5874 14536 0 0 12781 0 0 12768 0 0 11882 0 0 14339 0 0 12883 0 0 13524 0 0 12634 0 0 12371 0 0 3654.7 0 0 13748 0 0 12068 0 0 12976 0 0 12271 0 0 14446 0 0 12872 0 0 13774 0 0 12793 0 0 12255 0 0 3733.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9534600 9534600 0 0 NaN 3757 2074 450 450 250 267 285 316 285 316 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7283 285 316 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7283 285 316 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7283 Q9NYJ8 580 Q9NYJ8 Q9NYJ8 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 TAB2 sp|Q9NYJ8|TAB2_HUMAN TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 OS=Homo sapiens GN=TAB2 PE=1 SV=1 0.511646 2.04015 2.31973E-05 130.05 91.75 130.05 1 S VNEMENNLTRRRLKRSNSISQIPSLEEMQQL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.512)NS(0.32)IS(0.168)QIPSLEEMQQLR S(2.04)NS(-2.04)IS(-4.82)QIPS(-89.43)LEEMQQLR 1 3 -1.5696 4164.1 0 0 4295.5 0 0 3580.1 0 0 3242.4 0 0 3730.4 0 0 3717.6 0 0 5141.5 0 0 3795.7 0 0 4341.3 0 0 19718 0 0 3938.1 0 0 4051.8 0 0 3643 0 0 3401.1 0 0 3795.9 0 0 3743.3 0 0 5144 0 0 4398.5 0 0 4317.5 0 0 18655 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18053000 18053000 0 0 NaN 3758 2074 580 580 4059 4329 4618 5128 4618 5128 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21283 4618 5128 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21283 4618 5128 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21283 Q9NYL2 593 Q9NYL2 Q9NYL2 Mitogen-activated protein kinase kinase kinase MLT ZAK sp|Q9NYL2|MLTK_HUMAN Mitogen-activated protein kinase kinase kinase MLT OS=Homo sapiens GN=ZAK PE=1 SV=3 0.933804 11.4952 5.94987E-25 273.9 244.15 273.9 1 S RMRQIASNTSLQRSQSNPILGSPFFSHFDGQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.066)QS(0.934)NPILGSPFFSHFDGQDSYAAAVR S(-11.5)QS(11.5)NPILGS(-47.98)PFFS(-97.19)HFDGQDS(-135.08)Y(-192.17)AAAVR 3 3 0.30003 13599 0 0 19481 0 0 16367 0 0 17624 0 0 16011 0 0 23529 0 0 32973 0 0 32299 0 0 20537 0 0 63046 0 0 12878 0 0 18393 0 0 16349 0 0 18304 0 0 16497 0 0 23549 0 0 32409 0 0 33958 0 0 20792 0 0 60112 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 115300000 115300000 0 0 NaN 3759 2075 593 593 4244 4522 4819 5349 4819 5349 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23305 4819 5349 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23305 4819 5349 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23305 Q9NYL2 637 Q9NYL2 Q9NYL2 Mitogen-activated protein kinase kinase kinase MLT ZAK sp|Q9NYL2|MLTK_HUMAN Mitogen-activated protein kinase kinase kinase MLT OS=Homo sapiens GN=ZAK PE=1 SV=3 0.999717 35.595 3.37119E-30 318.13 267.07 318.13 1 S IKYQQITPVNQSRSSSPTQYGLTKNFSSLHL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX SSS(1)PTQYGLTK S(-35.6)S(-51.12)S(35.6)PT(-73.46)QY(-202.31)GLT(-173.07)K 3 2 -0.53761 58324 0 0 56413 0 0 61149 0 0 52976 0 0 52898 0 0 60340 0 0 67320 0 0 59382 0 0 55390 0 0 18042 0 0 55200 0 0 53272 0 0 61338 0 0 54722 0 0 54361 0 0 60175 0 0 67507 0 0 60146 0 0 55160 0 0 18363 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 299490000 299490000 0 0 NaN 3760 2075 637 637 4450 4741 5046 5598 5046 5598 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13362 5046 5598 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13362 5046 5598 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13362 Q9NYP9 233 Q9NYP9 Q9NYP9 Protein Mis18-alpha MIS18A sp|Q9NYP9|MS18A_HUMAN Protein Mis18-alpha OS=Homo sapiens GN=MIS18A PE=1 SV=1 0.978848 16.6543 0.0239363 65.395 37.87 65.395 1 S KLWEAESKLSFATCKS_______________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPXXXXXXXXXXXXXXX LSFAT(0.021)CKS(0.979) LS(-55.44)FAT(-16.65)CKS(16.65) 8 2 2.4845 25595 0 0 14794 0 0 25439 0 0 14011 0 0 11801 0 0 29199 0 0 14832 0 0 20391 0 0 16114 0 0 21889 0 0 24219 0 0 13971 0 0 25463 0 0 14677 0 0 12825 0 0 28521 0 0 14988 0 0 21454 0 0 15845 0 0 21083 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12484000 12484000 0 0 NaN 3761 2076 233 233 2553 2697 2895 3228 2895 3228 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16704 2895 3228 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16704 2895 3228 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16704 Q9NYV4 423 Q9NYV4 Q9NYV4 Cyclin-dependent kinase 12 CDK12 sp|Q9NYV4|CDK12_HUMAN Cyclin-dependent kinase 12 OS=Homo sapiens GN=CDK12 PE=1 SV=2 0.588669 1.55681 0.00953424 71.286 32.487 71.286 1 S AAAAAAKMDGKESKGSPVFLPRKENSSVEAK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX ES(0.411)KGS(0.589)PVFLPR ES(-1.56)KGS(1.56)PVFLPR 5 3 -0.1884 16063 0 0 13660 0 0 15639 0 0 15217 0 0 15191 0 0 16673 0 0 17072 0 0 16018 0 0 17128 0 0 12740 0 0 15198 0 0 12913 0 0 15770 0 0 15553 0 0 15469 0 0 16663 0 0 17289 0 0 16476 0 0 16897 0 0 12367 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 170940000 170940000 0 0 NaN 3762 2077 423 423 1155 1215 1307 1438 1307 1438 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14944 1307 1438 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14944 1307 1438 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14944 Q9NYV4 1083 Q9NYV4 Q9NYV4 Cyclin-dependent kinase 12 CDK12 sp|Q9NYV4|CDK12_HUMAN Cyclin-dependent kinase 12 OS=Homo sapiens GN=CDK12 PE=1 SV=2 0.995439 23.3892 3.43484E-11 208.05 163.44 208.05 1 S KETTSGTSTEPVKNSSPAPPQPAPGKVESGA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX NS(0.005)S(0.995)PAPPQPAPGK NS(-23.39)S(23.39)PAPPQPAPGK 3 2 0.40865 14190 0 0 14960 0 0 12868 0 0 15036 0 0 12236 0 0 13535 0 0 12012 0 0 13488 0 0 15730 0 0 4440.4 0 0 13422 0 0 14133 0 0 13026 0 0 15410 0 0 12455 0 0 13642 0 0 12340 0 0 13665 0 0 15364 0 0 4493.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14959000 14959000 0 0 NaN 3763 2077 1083 1083 2941 3120 3340 3704 3340 3704 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8854 3340 3704 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8854 3340 3704 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8854 Q9NYV4 274 Q9NYV4 Q9NYV4 Cyclin-dependent kinase 12 CDK12 sp|Q9NYV4|CDK12_HUMAN Cyclin-dependent kinase 12 OS=Homo sapiens GN=CDK12 PE=1 SV=2 0.987572 21.1931 0.00863225 82.302 70.652 82.302 2 S YDSYKKSPGSTSRRQSVSPPYKEPSAYQSST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RQS(0.988)VS(0.992)PPY(0.004)KEPS(0.013)AYQS(0.001)S(0.001)TR RQS(21.19)VS(22.16)PPY(-24.38)KEPS(-21.19)AY(-34.57)QS(-33.96)S(-33.54)T(-36.34)R 3 3 0.65739 0 11116 0 0 14049 0 0 12909 0 0 12245 0 0 11093 0 0 11455 0 0 12286 0 0 14529 0 0 16346 0 0 6461 0 0 10525 0 0 13261 0 0 12875 0 0 12670 0 0 11385 0 0 11568 0 0 12560 0 0 14649 0 0 15956 0 0 6420 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 17105000 0 17105000 0 NaN 3764 2077 274 274 3430 3643 3885 4313 3885 4313 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11168 3885 4313 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11168 3885 4313 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11168 Q9NYV4 276 Q9NYV4 Q9NYV4 Cyclin-dependent kinase 12 CDK12 sp|Q9NYV4|CDK12_HUMAN Cyclin-dependent kinase 12 OS=Homo sapiens GN=CDK12 PE=1 SV=2 0.992183 22.1632 0.00863225 82.302 70.652 82.302 2 S SYKKSPGSTSRRQSVSPPYKEPSAYQSSTRS X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPX RQS(0.988)VS(0.992)PPY(0.004)KEPS(0.013)AYQS(0.001)S(0.001)TR RQS(21.19)VS(22.16)PPY(-24.38)KEPS(-21.19)AY(-34.57)QS(-33.96)S(-33.54)T(-36.34)R 5 3 0.65739 0 11116 0 0 14049 0 0 12909 0 0 12245 0 0 11093 0 0 11455 0 0 12286 0 0 14529 0 0 16346 0 0 6461 0 0 10525 0 0 13261 0 0 12875 0 0 12670 0 0 11385 0 0 11568 0 0 12560 0 0 14649 0 0 15956 0 0 6420 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 17105000 0 17105000 0 NaN 3765 2077 276 276 3430 3643 3885 4313 3885 4313 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11168 3885 4313 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11168 3885 4313 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11168 Q9NYV4 332 Q9NYV4 Q9NYV4 Cyclin-dependent kinase 12 CDK12 sp|Q9NYV4|CDK12_HUMAN Cyclin-dependent kinase 12 OS=Homo sapiens GN=CDK12 PE=1 SV=2 0.877447 6.70975 0.00869467 78.69 46.627 78.69 2 S GSYSGRSPSPYGRRRSSSPFLSKRSLSRSPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX RRS(0.877)S(0.697)S(0.425)PFLSK RRS(6.71)S(2.78)S(-2.78)PFLS(-42.11)K 3 3 -0.39992 0 16167 0 0 14149 0 0 17018 0 0 15814 0 0 14392 0 0 15141 0 0 14015 0 0 15491 0 0 13869 0 0 4358 0 0 15301 0 0 13375 0 0 17054 0 0 16125 0 0 14755 0 0 15219 0 0 14281 0 0 15657 0 0 13691 0 0 4462.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 24246000 0 24246000 0 NaN 3766 2077 332 332 3456 3672 3917;3918 4352;4353 3917 4352 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11434 3917 4352 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11434 3917 4352 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11434 Q9NYV4 333 Q9NYV4 Q9NYV4 Cyclin-dependent kinase 12 CDK12 sp|Q9NYV4|CDK12_HUMAN Cyclin-dependent kinase 12 OS=Homo sapiens GN=CDK12 PE=1 SV=2 0.697025 2.77915 0.00869467 78.69 46.627 78.69 2 S SYSGRSPSPYGRRRSSSPFLSKRSLSRSPLP X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX RRS(0.877)S(0.697)S(0.425)PFLSK RRS(6.71)S(2.78)S(-2.78)PFLS(-42.11)K 4 3 -0.39992 0 16167 0 0 14149 0 0 17018 0 0 15814 0 0 14392 0 0 15141 0 0 14015 0 0 15491 0 0 13869 0 0 4358 0 0 15301 0 0 13375 0 0 17054 0 0 16125 0 0 14755 0 0 15219 0 0 14281 0 0 15657 0 0 13691 0 0 4462.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 24246000 0 24246000 0 NaN 3767 2077 333 333 3456 3672 3917;3918 4352;4353 3917 4352 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11434 3917 4352 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11434 3917 4352 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11434 Q9NZ09 207 Q9NZ09 Q9NZ09 Ubiquitin-associated protein 1 UBAP1 sp|Q9NZ09|UBAP1_HUMAN Ubiquitin-associated protein 1 OS=Homo sapiens GN=UBAP1 PE=1 SV=1 0.560332 1.0532 5.38434E-05 109.84 91.011 109.84 1 S MAQLLDNNLPRGGSGSVLQDEEVLASLERAT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPXX GGS(0.44)GS(0.56)VLQDEEVLASLER GGS(-1.05)GS(1.05)VLQDEEVLAS(-96.81)LER 5 3 0.91891 4330.5 0 0 5166.8 0 0 4161.2 0 0 4838 0 0 3932.3 0 0 5091.4 0 0 5191.5 0 0 4988 0 0 5010.7 0 0 12671 0 0 4097.1 0 0 4879 0 0 4199.4 0 0 4991.6 0 0 4021.6 0 0 5114.6 0 0 5219 0 0 5389.2 0 0 4951.8 0 0 12046 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7640000 7640000 0 0 NaN 3768 2078 207 207 1447 1524 1635 1805 1635 1805 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22713 1635 1805 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22713 1635 1805 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22713 Q9NZ09 146 Q9NZ09 Q9NZ09 Ubiquitin-associated protein 1 UBAP1 sp|Q9NZ09|UBAP1_HUMAN Ubiquitin-associated protein 1 OS=Homo sapiens GN=UBAP1 PE=1 SV=1 1 77.379 0.00883344 77.379 77.379 77.379 1 S TPTRVSSSATKQKVLSPPHIKADFNLADFEC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX VLS(1)PPHIK VLS(77.38)PPHIK 3 3 0.030523 10036 0 0 5295.5 0 0 11570 0 0 5383.4 0 0 3490 0 0 10815 0 0 2830.3 0 0 6248.3 0 0 5895.6 0 0 1685.4 0 0 9502.7 0 0 5003 0 0 11462 0 0 5609.4 0 0 4012.3 0 0 10544 0 0 2996.6 0 0 6495.3 0 0 5687.2 0 0 1731.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14425000 14425000 0 0 NaN 3769 2078 146 146 5178 5517 5879 6533 5879 6533 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16307 5879 6533 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16307 5879 6533 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16307 Q9NZ52 159 Q9NZ52 Q9NZ52 ADP-ribosylation factor-binding protein GGA3 GGA3 sp|Q9NZ52|GGA3_HUMAN ADP-ribosylation factor-binding protein GGA3 OS=Homo sapiens GN=GGA3 PE=1 SV=1 0.999999 58.4407 0.000112838 114.56 90.22 114.56 1 S VQSDPPIPVDRTLIPSPPPRPKNPVFDDEEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX TLIPS(1)PPPRPK T(-58.44)LIPS(58.44)PPPRPK 5 3 -0.23395 19653 0 0 24630 0 0 19200 0 0 27133 0 0 20508 0 0 21503 0 0 21151 0 0 22374 0 0 26577 0 0 5102.6 0 0 18595 0 0 23281 0 0 19377 0 0 27616 0 0 20749 0 0 21825 0 0 21647 0 0 22562 0 0 25993 0 0 5322.6 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 54703000 54703000 0 0 NaN 3770 2079 159 159 4771 5088 5421 6028;6029 5421 6029 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15015 5421 6029 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15015 5421 6029 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15015 Q9NZ63 261 Q9NZ63 Q9NZ63 Uncharacterized protein C9orf78 C9orf78 sp|Q9NZ63|CI078_HUMAN Uncharacterized protein C9orf78 OS=Homo sapiens GN=C9orf78 PE=1 SV=1 0.999977 46.3942 0.000121366 117.38 96.934 117.38 1 S RPLRVGDTEKPEPERSPPNRKRPANEKATDD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPXXXXXXXXXXX VGDTEKPEPERS(1)PPNR VGDT(-46.39)EKPEPERS(46.39)PPNR 12 3 0.09356 12393 0 0 18355 0 0 12538 0 0 19886 0 0 11354 0 0 10498 0 0 13181 0 0 15120 0 0 17725 0 0 14705 0 0 11727 0 0 17348 0 0 12605 0 0 20174 0 0 11622 0 0 11027 0 0 13454 0 0 15431 0 0 17297 0 0 14196 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 72060000 72060000 0 0 NaN 3771 2080 261 261 5112 5449 5804 6453 5804 6453 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8156 5804 6453 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8156 5804 6453 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8156 Q9NZI8 181 Q9NZI8 Q9NZI8 Insulin-like growth factor 2 mRNA-binding protein 1 IGF2BP1 sp|Q9NZI8|IF2B1_HUMAN Insulin-like growth factor 2 mRNA-binding protein 1 OS=Homo sapiens GN=IGF2BP1 PE=1 SV=2 1 85.5632 0.00532861 85.563 40.925 85.563 1 S GRRGGFGSRGQPRQGSPVAAGAPAKQQQVDI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX QGS(1)PVAAGAPAK QGS(85.56)PVAAGAPAK 3 3 0.19155 15507 0 0 41145 0 0 16532 0 0 40276 0 0 45301 0 0 18141 0 0 47433 0 0 34654 0 0 43046 0 0 2636.2 0 0 14677 0 0 38864 0 0 16944 0 0 41052 0 0 44299 0 0 19383 0 0 48060 0 0 34200 0 0 42660 0 0 3284.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1692800000 1692800000 0 0 NaN 3772 2081 181 181 3043 3227 3452 3826 3452 3826 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9102 3452 3826 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9102 3452 3826 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9102 Q9NZJ0 656 Q9NZJ0 Q9NZJ0 Denticleless protein homolog DTL sp|Q9NZJ0|DTL_HUMAN Denticleless protein homolog OS=Homo sapiens GN=DTL PE=1 SV=3 0.86349 8.01092 8.12051E-08 168.78 139.65 168.78 1 S RPCGEGSEMVGKENSSPENKNWLLAMAAKRK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPXX ENS(0.137)S(0.863)PENKNWLLAMAAK ENS(-8.01)S(8.01)PENKNWLLAMAAK 4 3 0.60437 7561.8 0 0 7080.4 0 0 7395.7 0 0 6931.7 0 0 4496.5 0 0 6300.2 0 0 4954.2 0 0 5923.5 0 0 6685.4 0 0 19413 0 0 7154.8 0 0 6687.8 0 0 7422 0 0 7116.2 0 0 4742.4 0 0 6375.1 0 0 5068.4 0 0 6541.2 0 0 6523 0 0 18417 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8457300 8457300 0 0 NaN 3773 2082 656 656 1080 1138 1226 1348 1226 1348 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22509 1226 1348 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22509 1226 1348 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22509 Q9NZJ4 4264 Q9NZJ4 Q9NZJ4 Sacsin SACS sp|Q9NZJ4|SACS_HUMAN Sacsin OS=Homo sapiens GN=SACS PE=1 SV=2 0.969984 15.8083 0.00940024 76.156 58.455 76.156 1 S EESSQSRDSAPSTPTSPTEFLTPGLRSIPPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPXXXXX DSAPST(0.001)PT(0.025)S(0.97)PT(0.004)EFLTPGLR DS(-44.78)APS(-37.41)T(-32.55)PT(-15.81)S(15.81)PT(-24.14)EFLT(-41.97)PGLR 9 3 -0.24351 7758.5 0 0 5776.1 0 0 7409.3 0 0 6793.6 0 0 6470.7 0 0 7141.4 0 0 6473.5 0 0 6911.2 0 0 6966 0 0 12015 0 0 7340.2 0 0 5462.2 0 0 7469.3 0 0 6918.9 0 0 6622.4 0 0 7162.4 0 0 6602.8 0 0 7303.4 0 0 6852.5 0 0 11474 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8576700 8576700 0 0 NaN 3774 2083 4264 4264 801 849 905 997 905 997 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20167 905 997 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20167 905 997 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20167 Q9NZM3 889 Q9NZM3 Q9NZM3 Intersectin-2 ITSN2 sp|Q9NZM3|ITSN2_HUMAN Intersectin-2 OS=Homo sapiens GN=ITSN2 PE=1 SV=3 0.998198 27.4349 1.14483E-42 357.88 330.75 357.88 1 S QKKSAFTRTVSPGSVSPIHGQGQVVENLKAQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPXX TVSPGS(0.002)VS(0.998)PIHGQGQVVENLK T(-129.52)VS(-87.42)PGS(-27.43)VS(27.43)PIHGQGQVVENLK 8 3 -0.34993 14077 0 0 12593 0 0 16871 0 0 12274 0 0 20698 0 0 17140 0 0 26784 0 0 19336 0 0 14897 0 0 14008 0 0 13331 0 0 11895 0 0 16886 0 0 12701 0 0 20854 0 0 17017 0 0 26646 0 0 19732 0 0 15203 0 0 13638 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 128100000 128100000 0 0 NaN 3775 2084 889 889 5017 5349 5701 6332 5701 6332 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16030 5701 6332 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16030 5701 6332 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16030 Q9NZN5 1288 Q9NZN5 Q9NZN5 Rho guanine nucleotide exchange factor 12 ARHGEF12 sp|Q9NZN5|ARHGC_HUMAN Rho guanine nucleotide exchange factor 12 OS=Homo sapiens GN=ARHGEF12 PE=1 SV=1 0.840545 7.21957 7.45936E-08 162.61 134.2 162.61 1 S SVQEDWQHFPRYRTASQGPQTDSVIQNSENI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP T(0.159)AS(0.841)QGPQTDSVIQNSENIK T(-7.22)AS(7.22)QGPQT(-48.46)DS(-70.6)VIQNS(-147.52)ENIK 3 3 2.7365 8416.4 0 0 7842 0 0 8836.9 0 0 8665.6 0 0 12093 0 0 8935.1 0 0 10157 0 0 8402.7 0 0 8173.3 0 0 21998 0 0 7965.6 0 0 7412.8 0 0 8910.2 0 0 8851.6 0 0 12050 0 0 8978.9 0 0 10377 0 0 9111.9 0 0 8148.7 0 0 20908 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11870000 11870000 0 0 NaN 3776 2085 1288 1288 4639 4950 5273 5859 5273 5859 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14865 5273 5859 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14865 5273 5859 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14865 Q9NZN8 165 Q9NZN8 Q9NZN8 CCR4-NOT transcription complex subunit 2 CNOT2 sp|Q9NZN8|CNOT2_HUMAN CCR4-NOT transcription complex subunit 2 OS=Homo sapiens GN=CNOT2 PE=1 SV=1 0.999999 58.8982 5.28665E-16 239.39 197.32 239.39 1 S GIPSRTNSMSSSGLGSPNRSSPSIICMPKQQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPXXXXXXXXXXXX TNSMSSSGLGS(1)PNR T(-120.55)NS(-89.16)MS(-86.01)S(-74.69)S(-58.9)GLGS(58.9)PNR 11 2 -0.64465 25396 0 0 39237 0 0 28141 0 0 35831 0 0 36884 0 0 26378 0 0 43911 0 0 38476 0 0 39303 0 0 5247.5 0 0 24041 0 0 37046 0 0 28299 0 0 36846 0 0 37008 0 0 27024 0 0 44234 0 0 38284 0 0 38976 0 0 5831.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 49391000 49391000 0 0 NaN 3777 2086 165 165 4814 5136 5475 6093 5475 6093 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8983 5475 6093 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8983 5475 6093 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8983 Q9NZT2 315 Q9NZT2 Q9NZT2 Opioid growth factor receptor OGFR sp|Q9NZT2|OGFR_HUMAN Opioid growth factor receptor OS=Homo sapiens GN=OGFR PE=1 SV=3 1 63.4304 2.20606E-05 126.99 104.77 126.99 1 S LPHPLEGSRKVEEEGSPGDPDHEASTQGRTC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPPXX KVEEEGS(1)PGDPDHEASTQGR KVEEEGS(63.43)PGDPDHEAS(-63.43)T(-78.03)QGR 7 4 -0.47072 6953.7 0 0 6151.1 0 0 5331 0 0 5990.5 0 0 5382.6 0 0 7307 0 0 7068.5 0 0 8045.1 0 0 6630.4 0 0 4737.9 0 0 6573.9 0 0 5809.8 0 0 5465.2 0 0 6181.8 0 0 5482.6 0 0 7283.6 0 0 7102.2 0 0 8183.9 0 0 6560.8 0 0 4647.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12067000 12067000 0 0 NaN 3778 2088 315 315 2259 2387 2569 2867 2569 2867 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7243 2569 2867 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7243 2569 2867 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7243 Q9P035 114 Q9P035 Q9P035 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 HACD3 sp|Q9P035|HACD3_HUMAN Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 OS=Homo sapiens GN=PTPLAD1 PE=1 SV=2 1 214.234 8.21002E-16 214.23 167.05 214.23 1 S RPLFLAPDFDRWLDESDAEMELRAKEEERLN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX WLDES(1)DAEMELR WLDES(214.23)DAEMELR 5 2 -0.023531 39080 0 0 73599 0 0 42562 0 0 65531 0 0 51336 0 0 40010 0 0 50295 0 0 59329 0 0 74954 0 0 174850 0 0 36992 0 0 69480 0 0 42763 0 0 67367 0 0 51586 0 0 41815 0 0 51922 0 0 64031 0 0 72911 0 0 166020 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 57077000 57077000 0 0 NaN 3779 2089 114 114 5341 5689;5690 6067;6068 6741;6742;6743;6744;6745 6068 6742 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21442 6068 6742 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21442 6068 6742 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21442 Q9P0B6 42 Q9P0B6 Q9P0B6 Coiled-coil domain-containing protein 167 CCDC167 sp|Q9P0B6|CC167_HUMAN Coiled-coil domain-containing protein 167 OS=Homo sapiens GN=CCDC167 PE=1 SV=2 1 71.4254 0.019815 71.425 24.228 71.425 1 S RDLEAVNSRLHSRELSPEARRSLEKEKNSLM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX ELS(1)PEAR ELS(71.43)PEAR 3 2 -1.3264 35912 0 0 27928 0 0 38353 0 0 29993 0 0 29576 0 0 35107 0 0 33960 0 0 36755 0 0 27583 0 0 4848 0 0 33991 0 0 26395 0 0 38380 0 0 30752 0 0 30588 0 0 34991 0 0 34184 0 0 36950 0 0 27487 0 0 5415.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30615000 30615000 0 0 NaN 3780 2090 42 42 1052 1108 1196 1315 1196 1315 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8248 1196 1315 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8248 1196 1315 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8248 Q9P0K1 834 Q9P0K1 Q9P0K1 Disintegrin and metalloproteinase domain-containing protein 22 ADAM22 sp|Q9P0K1|ADA22_HUMAN Disintegrin and metalloproteinase domain-containing protein 22 OS=Homo sapiens GN=ADAM22 PE=1 SV=1 0.992666 21.3147 0.000228377 105.17 12.305 105.17 1 S KHISDICENGRPRSNSWQGNLGGNKKKIRGK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX S(0.007)NS(0.993)WQGNLGGNK S(-21.31)NS(21.31)WQGNLGGNK 3 2 2.5489 18509 0 0 10489 0 0 15930 0 0 10900 0 0 23611 0 0 19165 0 0 21951 0 0 19244 0 0 12036 0 0 134920 0 0 17504 0 0 9910.9 0 0 16279 0 0 11300 0 0 23474 0 0 19096 0 0 22153 0 0 23365 0 0 12296 0 0 127490 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10337000 10337000 0 0 NaN 3781 2091 834 834 4069 4339 4629 5142 4629 5142 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13438 4629 5142 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13438 4629 5142 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13438 Q9P0U3 157 Q9P0U3 Q9P0U3 Sentrin-specific protease 1 SENP1 sp|Q9P0U3|SENP1_HUMAN Sentrin-specific protease 1 OS=Homo sapiens GN=SENP1 PE=1 SV=2 0.930844 11.4289 6.58786E-05 113.59 94.21 113.59 1 S HVSAYEKSFPIKPVPSPSWSGSCRRSLLSPK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPXXXXXXX SFPIKPVPS(0.931)PS(0.067)WS(0.002)GSCR S(-73.92)FPIKPVPS(11.43)PS(-11.43)WS(-26.88)GS(-35.53)CR 9 3 0.81182 17567 0 0 25962 0 0 19222 0 0 22809 0 0 8211 0 0 19458 0 0 9322 0 0 19556 0 0 25313 0 0 10255 0 0 16629 0 0 24508 0 0 19128 0 0 23559 0 0 9013.6 0 0 19674 0 0 9873.5 0 0 19921 0 0 24298 0 0 10109 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 47665000 47665000 0 0 NaN 3782 2093 157 157 3751 3991 4255 4730 4255 4730 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18700 4255 4730 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18700 4255 4730 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18700 Q9P0U4 224 Q9P0U4 Q9P0U4 CXXC-type zinc finger protein 1 CXXC1 sp|Q9P0U4|CXXC1_HUMAN CXXC-type zinc finger protein 1 OS=Homo sapiens GN=CXXC1 PE=1 SV=2 0.984928 18.6283 3.50303E-05 119.72 102.43 119.72 1 S QLRARESYKYFPSSLSPVTPSESLPRPRRPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPXXX YFPS(0.001)S(0.014)LS(0.985)PVTPSESLPRPR Y(-78.24)FPS(-29.33)S(-18.63)LS(18.63)PVT(-33.79)PS(-56.56)ES(-61.9)LPRPR 7 3 0.53204 8531.3 0 0 9038.1 0 0 8100.2 0 0 8185.8 0 0 7126.1 0 0 7785.9 0 0 9920.7 0 0 9636.4 0 0 9535.9 0 0 10976 0 0 8071.1 0 0 8533.1 0 0 8174.6 0 0 8450.5 0 0 7328.2 0 0 7865.9 0 0 9953.7 0 0 9925 0 0 9425.4 0 0 10558 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26336000 26336000 0 0 NaN 3783 2094 224 224 5374 5725 6106 6787 6106 6787 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19191 6106 6787 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19191 6106 6787 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19191 Q9P107 437 Q9P107 Q9P107 GEM-interacting protein GMIP sp|Q9P107|GMIP_HUMAN GEM-interacting protein OS=Homo sapiens GN=GMIP PE=1 SV=2 0.999984 48.1829 2.50965E-31 301.31 186.34 301.31 1 S DVDSVGGGSESRSLDSPTSSPGAGTRQLVKA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX SLDS(1)PTSSPGAGTR S(-59.48)LDS(48.18)PT(-48.18)S(-69.09)S(-105.73)PGAGT(-183.56)R 4 2 -2.4105 30368 0 0 10897 0 0 30553 0 0 12394 0 0 12466 0 0 32169 0 0 11439 0 0 17502 0 0 11201 0 0 3911.1 0 0 28737 0 0 10302 0 0 30531 0 0 12952 0 0 13704 0 0 31185 0 0 11686 0 0 18242 0 0 11062 0 0 4087.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24961000 24961000 0 0 NaN 3784 2095 437 437 3926 4185 4467 4966 4467 4966 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8744 4467 4966 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8744 4467 4966 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8744 Q9P1Y6 1202 Q9P1Y6 Q9P1Y6 PHD and RING finger domain-containing protein 1 PHRF1 sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1 OS=Homo sapiens GN=PHRF1 PE=1 SV=3 1 140.002 8.76521E-12 206.47 181.27 206.47 1 S TRSHSPERKGAVREASPAPLAQGEPGREDLP X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP EAS(1)PAPLAQGEPGREDLPTR EAS(140)PAPLAQGEPGREDLPT(-140)R 3 3 0.11233 14150 0 0 13137 0 0 13014 0 0 15430 0 0 10458 0 0 13620 0 0 9944.4 0 0 13450 0 0 14760 0 0 9881.8 0 0 13385 0 0 12423 0 0 13138 0 0 15674 0 0 10761 0 0 13749 0 0 10279 0 0 13796 0 0 14359 0 0 9616.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 84268000 84268000 0 0 NaN 3785 2096 1202 1202 885 938 1016 1123 1016 1123 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12252 1016 1123 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12252 1016 1123 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12252 Q9P1Y6 1124 Q9P1Y6 Q9P1Y6 PHD and RING finger domain-containing protein 1 PHRF1 sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1 OS=Homo sapiens GN=PHRF1 PE=1 SV=3 0.747507 5.03891 0.030488 58.487 32.368 58.487 1 S KKKRRSASRPRGRECSPTSSLERLCRHKHQR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX GRECS(0.748)PT(0.234)S(0.008)S(0.01)LER GRECS(5.04)PT(-5.04)S(-19.48)S(-18.83)LER 5 2 1.0265 7546.8 0 0 6368.3 0 0 9210.6 0 0 7248 0 0 5819 0 0 8491.4 0 0 4797.6 0 0 7007.1 0 0 7711.2 0 0 2539.4 0 0 7147.5 0 0 6021 0 0 9135.4 0 0 7408.3 0 0 6093.7 0 0 8442 0 0 5012.3 0 0 7162.7 0 0 7485 0 0 2553.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11275000 11275000 0 0 NaN 3786 2096 1124 1124 1583 1668 1803 2004 1803 2004 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7155 1803 2004 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7155 1803 2004 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7155 Q9P1Y6 814 Q9P1Y6 Q9P1Y6 PHD and RING finger domain-containing protein 1 PHRF1 sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1 OS=Homo sapiens GN=PHRF1 PE=1 SV=3 1 64.8401 7.97291E-07 145.55 68.468 145.55 1 S TFRPVDDKEQRKENPSPLFSIKKTKQLRSEV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX KENPS(1)PLFSIK KENPS(64.84)PLFS(-64.84)IK 5 3 -1.3568 8279.8 0 0 8406.6 0 0 8149.4 0 0 8700.9 0 0 6749.7 0 0 8194.9 0 0 6327.3 0 0 9400.6 0 0 8950 0 0 6439.2 0 0 7834.3 0 0 7943.1 0 0 8195.6 0 0 8907.7 0 0 6928.8 0 0 8264 0 0 6532.8 0 0 9576.8 0 0 8719.7 0 0 6280.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9416500 9416500 0 0 NaN 3787 2096 814 814 2042 2161 2328 2595 2328 2595 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18397 2328 2595 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18397 2328 2595 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18397 Q9P1Y6 1191 Q9P1Y6 Q9P1Y6 PHD and RING finger domain-containing protein 1 PHRF1 sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1 OS=Homo sapiens GN=PHRF1 PE=1 SV=3 0.999499 32.9997 0.00688931 88.37 66.133 88.37 1 S RRPRSREKWPQTRSHSPERKGAVREASPAPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX S(0.001)HS(0.999)PERK S(-33)HS(33)PERK 3 3 0.17984 10864 0 0 10566 0 0 11161 0 0 9712.4 0 0 5077.2 0 0 10280 0 0 5927.9 0 0 9513.7 0 0 11036 0 0 3677.3 0 0 10281 0 0 9976.6 0 0 11148 0 0 10034 0 0 5528.5 0 0 10276 0 0 6133.2 0 0 9683.4 0 0 10672 0 0 3682.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10195000 10195000 0 0 NaN 3788 2096 1191 1191 3839 4092 4367 4856 4367 4856 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4851 4367 4856 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4851 4367 4856 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4851 Q9P1Y6 867 Q9P1Y6 Q9P1Y6 PHD and RING finger domain-containing protein 1 PHRF1 sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1 OS=Homo sapiens GN=PHRF1 PE=1 SV=3 0.999968 45.8849 0.00966869 74.841 47.36 74.841 1 S PGLLPSEITRTISINSPKAQTVQAVRCVTSY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPXXXXXXXXXXXXX TISINS(1)PK T(-52.15)IS(-45.88)INS(45.88)PK 6 3 0.041987 8911.6 0 0 8887.9 0 0 9023 0 0 9454.7 0 0 4186.9 0 0 9533.5 0 0 5005.3 0 0 8347.2 0 0 9806 0 0 1220 0 0 8433.1 0 0 8399.3 0 0 9021.6 0 0 9674.4 0 0 4550.6 0 0 9539.8 0 0 5187.1 0 0 8455.6 0 0 9472 0 0 1341.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13920000 13920000 0 0 NaN 3789 2096 867 867 4751 5067 5400 6004 5400 6004 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13671 5400 6004 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13671 5400 6004 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13671 Q9P1Y6 973 Q9P1Y6 Q9P1Y6 PHD and RING finger domain-containing protein 1 PHRF1 sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1 OS=Homo sapiens GN=PHRF1 PE=1 SV=3 0.99999 50.1914 5.0451E-08 162.58 144.85 162.58 1 S RTVTCVTVVEPEAPPSPDVLQAATHRVVELR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPPPPPPPPXXXXX TVTCVTVVEPEAPPS(1)PDVLQAATHR T(-104.16)VT(-97.37)CVT(-75.73)VVEPEAPPS(50.19)PDVLQAAT(-50.19)HR 15 3 0.45856 3453.3 0 0 3174.7 0 0 3490.5 0 0 3367.2 0 0 4819.7 0 0 3698.5 0 0 3493.1 0 0 3448.4 0 0 3511.7 0 0 19044 0 0 3267.8 0 0 3000.1 0 0 3526.3 0 0 3450.9 0 0 4793.8 0 0 3725.2 0 0 3619.9 0 0 4042.5 0 0 3464.2 0 0 18012 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22055000 22055000 0 0 NaN 3790 2096 973 973 5024 5358 5710 6349 5710 6349 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18576 5710 6349 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18576 5710 6349 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18576 Q9P206 545 Q9P206 Q9P206 Uncharacterized protein KIAA1522 KIAA1522 sp|Q9P206|K1522_HUMAN Uncharacterized protein KIAA1522 OS=Homo sapiens GN=KIAA1522 PE=1 SV=2 1 74.9873 0.00847512 74.987 50.644 74.987 1 S GTPTLPPKGLAGPPASPGKAQPPKPERVTSL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX GLAGPPAS(1)PGK GLAGPPAS(74.99)PGK 8 3 -1.4078 6192.7 0 0 17917 0 0 7098.7 0 0 17570 0 0 9901.6 0 0 7570.1 0 0 6536.5 0 0 10107 0 0 17428 0 0 1212.2 0 0 5863.3 0 0 16923 0 0 7123.9 0 0 17901 0 0 9845.4 0 0 8068.3 0 0 7113.5 0 0 10077 0 0 16734 0 0 1375.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20445000 20445000 0 0 NaN 3791 2097 545 545 1492 1570 1695 1876 1695 1876 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11845 1695 1876 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11845 1695 1876 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11845 Q9P206 979 Q9P206 Q9P206 Uncharacterized protein KIAA1522 KIAA1522 sp|Q9P206|K1522_HUMAN Uncharacterized protein KIAA1522 OS=Homo sapiens GN=KIAA1522 PE=1 SV=2 0.947268 12.5523 0.0142779 67.76 47.922 67.76 1 S PPVARKPSVGVPPPASPSYPRAEPLTAPPTN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPXXXXXXXXXX KPSVGVPPPAS(0.947)PS(0.053)YPR KPS(-45.12)VGVPPPAS(12.55)PS(-12.55)Y(-41.21)PR 11 3 -0.61586 7050.8 0 0 15555 0 0 8777.8 0 0 15238 0 0 11522 0 0 8981.7 0 0 11318 0 0 10804 0 0 16795 0 0 11288 0 0 6678.4 0 0 14692 0 0 8772.7 0 0 15564 0 0 11533 0 0 9326.1 0 0 11681 0 0 11106 0 0 16340 0 0 10879 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15047000 15047000 0 0 NaN 3792 2097 979 979 2173 2296 2471 2751 2471 2751 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13315 2471 2751 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13315 2471 2751 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13315 Q9P209 237 Q9P209 Q9P209 Centrosomal protein of 72 kDa CEP72 sp|Q9P209|CEP72_HUMAN Centrosomal protein of 72 kDa OS=Homo sapiens GN=CEP72 PE=1 SV=2 0.999995 53.1565 1.12412E-05 134.58 117.08 134.58 1 S READSRGSQESRHLLSPQLVQYQCGDSGKQG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPXX HLLS(1)PQLVQYQCGDSGK HLLS(53.16)PQLVQY(-53.16)QCGDS(-97)GK 4 3 0.21229 12906 0 0 11817 0 0 14758 0 0 12257 0 0 10981 0 0 13748 0 0 13596 0 0 12949 0 0 13276 0 0 103920 0 0 12219 0 0 11166 0 0 14713 0 0 12583 0 0 11403 0 0 13900 0 0 13705 0 0 16151 0 0 13113 0 0 98150 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25468000 25468000 0 0 NaN 3793 2098 237 237 1725 1819 1964 2189 1964 2189 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17754 1964 2189 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17754 1964 2189 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17754 Q9P215 11 Q9P215 Q9P215 Pogo transposable element with KRAB domain POGK sp|Q9P215|POGK_HUMAN Pogo transposable element with KRAB domain OS=Homo sapiens GN=POGK PE=1 SV=2 1 67.5493 1.75079E-17 165.02 155.05 165.02 1 S _____MESTAYPLNLSLKEEEEEEEIQSREL X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPPPPPXX MESTAYPLNLS(1)LKEEEEEEEIQSR MES(-91.91)T(-80.46)AY(-102.15)PLNLS(67.55)LKEEEEEEEIQS(-67.55)R 11 3 0.99821 1924.3 0 0 2351.3 0 0 1783.7 0 0 2006.8 0 0 2838.9 0 0 1428.2 0 0 3546.1 0 0 4479.1 0 0 1953 0 0 38141 0 0 1820.3 0 0 2219.3 0 0 1818.4 0 0 2072.2 0 0 2827.1 0 0 1567.5 0 0 3532 0 0 5523.9 0 0 1994.6 0 0 36018 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10207000 10207000 0 0 NaN 3794 2099 11 11 2687 2844 3051 3397 3051 3397 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20094 3051 3397 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20094 3051 3397 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20094 Q9P244 646 Q9P244 Q9P244 Leucine-rich repeat and fibronectin type III domain-containing protein 1 LRFN1 sp|Q9P244|LRFN1_HUMAN Leucine-rich repeat and fibronectin type III domain-containing protein 1 OS=Homo sapiens GN=LRFN1 PE=1 SV=2 0.742938 5.90502 7.43867E-05 101.43 84.744 101.43 1 S ASAEPEVVLGRSLGGSATSLCLLPSEETSGE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP S(0.191)LGGS(0.743)AT(0.064)S(0.003)LCLLPSEETSGEESR S(-5.91)LGGS(5.91)AT(-10.67)S(-24.46)LCLLPS(-91.76)EET(-96.08)S(-97.81)GEES(-100.85)R 5 3 -0.55463 4756.1 0 0 4479.5 0 0 3968.5 0 0 4495.2 0 0 4890 0 0 3899.4 0 0 4848.5 0 0 4523.8 0 0 4961.4 0 0 26379 0 0 4497.5 0 0 4231.7 0 0 4052.5 0 0 4605 0 0 4907.5 0 0 3992.6 0 0 4940.4 0 0 5308.3 0 0 4890.6 0 0 24944 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6761300 6761300 0 0 NaN 3795 2100 646 646 3937 4196 4478 4977 4478 4977 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19604 4478 4977 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19604 4478 4977 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19604 Q9P246 680 Q9P246 Q9P246 Stromal interaction molecule 2 STIM2 sp|Q9P246|STIM2_HUMAN Stromal interaction molecule 2 OS=Homo sapiens GN=STIM2 PE=1 SV=2 0.993579 21.8964 6.54914E-08 170.18 134.54 170.18 1 S SPASKVYNGILEKSCSMNQLSSGIPVPKPRH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX S(0.006)CS(0.994)MNQLSSGIPVPKPR S(-21.9)CS(21.9)MNQLS(-63.76)S(-70.78)GIPVPKPR 3 3 -1.1262 9350.9 0 0 10559 0 0 10865 0 0 9920.9 0 0 15899 0 0 10282 0 0 13477 0 0 12745 0 0 11406 0 0 17635 0 0 8854 0 0 9971.2 0 0 10911 0 0 10231 0 0 15800 0 0 10355 0 0 13778 0 0 13220 0 0 11342 0 0 16900 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13353000 13353000 0 0 NaN 3796 2101 680 680 3647 3877 4131 4590 4131 4590 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16809 4131 4590 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16809 4131 4590 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16809 Q9P246 523 Q9P246 Q9P246 Stromal interaction molecule 2 STIM2 sp|Q9P246|STIM2_HUMAN Stromal interaction molecule 2 OS=Homo sapiens GN=STIM2 PE=1 SV=2 0.956316 13.4028 1.33176E-06 140.75 104.41 140.75 1 S RSSSLCRSRRSIVPSSPQPQRAQLAPHAPHP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX SIVPS(0.044)S(0.956)PQPQR S(-62.2)IVPS(-13.4)S(13.4)PQPQR 6 2 0.71102 16475 0 0 21938 0 0 17142 0 0 22044 0 0 17133 0 0 15680 0 0 16084 0 0 19364 0 0 25205 0 0 12334 0 0 15592 0 0 20724 0 0 17220 0 0 22525 0 0 17381 0 0 16071 0 0 16672 0 0 19652 0 0 24483 0 0 12062 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16076000 16076000 0 0 NaN 3797 2101 523 523 3874 4128 4405 4899 4405 4899 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10771 4405 4899 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10771 4405 4899 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10771 Q9P260 182 Q9P260 Q9P260 LisH domain and HEAT repeat-containing protein KIAA1468 KIAA1468 sp|Q9P260|K1468_HUMAN LisH domain and HEAT repeat-containing protein KIAA1468 OS=Homo sapiens GN=KIAA1468 PE=1 SV=2 0.931229 11.3762 6.94715E-23 274.64 242.21 274.64 1 S STASGGGQLNRAGSISTLDSLDFARYSDDGN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPXXXXXX AGS(0.068)IS(0.931)T(0.001)LDSLDFAR AGS(-11.38)IS(11.38)T(-29.97)LDS(-69.81)LDFAR 5 2 -0.087141 13190 0 0 18011 0 0 12622 0 0 16981 0 0 6416.2 0 0 11300 0 0 6738.5 0 0 12798 0 0 19741 0 0 18852 0 0 12479 0 0 17009 0 0 12667 0 0 17407 0 0 6894.4 0 0 11635 0 0 7199.8 0 0 13348 0 0 18927 0 0 18048 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22523000 22523000 0 0 NaN 3798 2102 182 182 223 237 255 283 255 283 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21093 255 283 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21093 255 283 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21093 Q9P275 742 Q9P275 Q9P275 Ubiquitin carboxyl-terminal hydrolase 36 USP36 sp|Q9P275|UBP36_HUMAN Ubiquitin carboxyl-terminal hydrolase 36 OS=Homo sapiens GN=USP36 PE=1 SV=3 0.999877 39.574 5.89073E-05 131.36 104.1 131.36 1 S PVVASTWPVHRARAVSPAPQSSSRLQPPFSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX AVS(1)PAPQSSSR AVS(39.57)PAPQS(-39.57)S(-49.08)S(-69.43)R 3 2 0.16509 11080 0 0 12027 0 0 10223 0 0 10878 0 0 7873 0 0 11692 0 0 6799.2 0 0 10354 0 0 11323 0 0 3629.3 0 0 10481 0 0 11355 0 0 10312 0 0 11252 0 0 8117.4 0 0 11673 0 0 7096.4 0 0 10547 0 0 10981 0 0 3657.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11945000 11945000 0 0 NaN 3799 2103 742 742 566 603 644 719 644 719 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6249 644 719 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6249 644 719 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6249 Q9P275 871 Q9P275 Q9P275 Ubiquitin carboxyl-terminal hydrolase 36 USP36 sp|Q9P275|UBP36_HUMAN Ubiquitin carboxyl-terminal hydrolase 36 OS=Homo sapiens GN=USP36 PE=1 SV=3 0.999616 34.1557 0.0240745 63.073 32.907 63.073 1 S AASALQEGQTQRQPGSPMYRREGQAQLPAVR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX QPGS(1)PMYR QPGS(34.16)PMY(-34.16)R 4 2 0.12399 17666 0 0 20900 0 0 21426 0 0 18375 0 0 18556 0 0 21499 0 0 17475 0 0 19058 0 0 19035 0 0 5010.3 0 0 16731 0 0 19729 0 0 21321 0 0 19071 0 0 18986 0 0 21389 0 0 17883 0 0 19362 0 0 18716 0 0 5158.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14421000 14421000 0 0 NaN 3800 2103 871 871 3098 3286 3516 3898 3516 3898 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9149 3516 3898 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9149 3516 3898 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9149 Q9P289 4 Q9P289 Q9P289 Serine/threonine-protein kinase 26 STK26 sp|Q9P289|STK26_HUMAN Serine/threonine-protein kinase 26 OS=Homo sapiens GN=STK26 PE=1 SV=2 1 73.3698 5.78114E-12 74.876 63.254 74.876 1 S ____________MAHSPVAVQVPGMQNNIAD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP AHS(1)PVAVQVPGMQNNIADPEELFTK AHS(73.37)PVAVQVPGMQNNIADPEELFT(-73.37)K 3 3 -0.21666 44178 0 0 74558 0 0 56119 0 0 83890 0 0 116720 0 0 56061 0 0 96887 0 0 95656 0 0 91438 0 0 153030 0 0 41848 0 0 70486 0 0 56527 0 0 85119 0 0 114580 0 0 58220 0 0 99426 0 0 99027 0 0 90453 0 0 146310 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 600640000 600640000 0 0 NaN 3801 2104 4 4 243 258;259 276;277 307;308 277 308 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23412 277 308 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23412 277 308 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23412 Q9P289 246 Q9P289 Q9P289 Serine/threonine-protein kinase 26 STK26 sp|Q9P289|STK26_HUMAN Serine/threonine-protein kinase 26 OS=Homo sapiens GN=STK26 PE=1 SV=2 1 42.8094 0.0418055 42.809 22.428 42.809 1 S IPKNNPPTLVGDFTKSFKEFIDACLNKDPSF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(1)FKEFIDACLNK S(42.81)FKEFIDACLNK 1 3 3.8288 11522 0 0 8273.8 0 0 12014 0 0 8393.1 0 0 18069 0 0 13282 0 0 20567 0 0 13244 0 0 8675.7 0 0 11777 0 0 10904 0 0 7816.6 0 0 12148 0 0 8689 0 0 18003 0 0 13117 0 0 20490 0 0 13641 0 0 9064.7 0 0 11396 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 47831000 47831000 0 0 NaN 3802 2104 246 246 3746 3986 4250 4725 4250 4725 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20133 4250 4725 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20133 4250 4725 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20133 Q9P2B4 568 Q9P2B4 Q9P2B4 CTTNBP2 N-terminal-like protein CTTNBP2NL sp|Q9P2B4|CT2NL_HUMAN CTTNBP2 N-terminal-like protein OS=Homo sapiens GN=CTTNBP2NL PE=1 SV=2 0.891419 9.14412 2.41277E-11 199.94 174.43 199.94 1 S GKVSSPLSPLSPGIKSPTIPRAERGNPPPIP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPXXXXXXXXXX VSSPLSPLSPGIKS(0.891)PT(0.109)IPR VS(-149.08)S(-137.98)PLS(-107.91)PLS(-46.29)PGIKS(9.14)PT(-9.14)IPR 14 3 -0.0013148 9729.5 0 0 19276 0 0 9853.6 0 0 17296 0 0 11649 0 0 10139 0 0 13487 0 0 14219 0 0 19183 0 0 11640 0 0 9207 0 0 18198 0 0 9940.3 0 0 17765 0 0 11746 0 0 10555 0 0 13797 0 0 14455 0 0 18686 0 0 11290 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26441000 26441000 0 0 NaN 3803 2105 568 568 5276 5623 5994 6660 5994 6660 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19393 5994 6660 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19393 5994 6660 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19393 Q9P2D0 1045 Q9P2D0 Q9P2D0 Inhibitor of Bruton tyrosine kinase IBTK sp|Q9P2D0|IBTK_HUMAN Inhibitor of Bruton tyrosine kinase OS=Homo sapiens GN=IBTK PE=1 SV=3 0.996275 24.5017 4.67514E-05 118.52 101.3 118.52 1 S SEGSYAGVGSPRDLQSPDFTTGFHSDKIEAK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP DLQS(0.996)PDFT(0.004)TGFHSDKIEAK DLQS(24.5)PDFT(-24.5)T(-37.17)GFHS(-72.46)DKIEAK 4 4 -0.62347 10127 0 0 9165.8 0 0 11142 0 0 11137 0 0 6785.3 0 0 11414 0 0 7986.6 0 0 10376 0 0 10133 0 0 29127 0 0 9586.8 0 0 8669.8 0 0 11110 0 0 11320 0 0 7162 0 0 11470 0 0 8130.8 0 0 11326 0 0 9907.3 0 0 27666 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24824000 24824000 0 0 NaN 3804 2106 1045 1045 744 788 839 926 839 926 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17300 839 926 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17300 839 926 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17300 Q9P2D3 288 Q9P2D3 Q9P2D3 HEAT repeat-containing protein 5B HEATR5B sp|Q9P2D3|HTR5B_HUMAN HEAT repeat-containing protein 5B OS=Homo sapiens GN=HEATR5B PE=1 SV=2 1 60.9729 0.0302862 60.973 11.555 60.973 1 S LMATGFLRGGSGFLKSGGEMLKVGGSVNREV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX S(1)GGEMLK S(60.97)GGEMLK 1 2 -0.03077 51079 0 0 49888 0 0 50508 0 0 52073 0 0 43420 0 0 50586 0 0 46338 0 0 49375 0 0 52228 0 0 3740.1 0 0 48331 0 0 47140 0 0 50810 0 0 53309 0 0 44528 0 0 50763 0 0 47189 0 0 49686 0 0 51283 0 0 4664.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 140920000 140920000 0 0 NaN 3805 2108 288 288 3782 4029 4298 4777 4298 4777 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12348 4298 4777 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12348 4298 4777 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12348 Q9P2E9 583 Q9P2E9 Q9P2E9 Ribosome-binding protein 1 RRBP1 sp|Q9P2E9|RRBP1_HUMAN Ribosome-binding protein 1 OS=Homo sapiens GN=RRBP1 PE=1 SV=4 1 79.6515 5.32374E-06 153.74 97.334 79.652 1 S KKAEGSPSEGKKAEGSPNQGKKADAAANQGK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX KAEGS(1)PNQGK KAEGS(79.65)PNQGK 5 3 0.64156 46308 0 0 39483 0 0 47469 0 0 34878 0 0 63830 0 0 50111 0 0 65754 0 0 50265 0 0 40888 0 0 5448.2 0 0 43824 0 0 37272 0 0 47936 0 0 36337 0 0 63813 0 0 49561 0 0 66158 0 0 50578 0 0 41398 0 0 6293.4 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 111950000 111950000 0 0 NaN 3806 2109 583 583 141;1998 147;2113 159;2277 180;2543 2277 2543 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6738 159 180 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6367 159 180 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6367 Q9P2E9 533 Q9P2E9 Q9P2E9 Ribosome-binding protein 1 RRBP1 sp|Q9P2E9|RRBP1_HUMAN Ribosome-binding protein 1 OS=Homo sapiens GN=RRBP1 PE=1 SV=4 1 118.507 0.000235498 118.51 83.304 118.51 1 S QGKKTEGAQGKKAERSPNQGKKGEGAPIQGK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX KAERS(1)PNQGK KAERS(118.51)PNQGK 5 3 -0.10768 19158 0 0 15320 0 0 20850 0 0 14143 0 0 38531 0 0 20374 0 0 35001 0 0 24805 0 0 13655 0 0 2746.5 0 0 18134 0 0 14465 0 0 21107 0 0 14694 0 0 37987 0 0 20204 0 0 35213 0 0 24792 0 0 14379 0 0 3160.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 33471000 33471000 0 0 NaN 3807 2109 533 533 2003 2118 2282 2548 2282 2548 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5828 2282 2548 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5828 2282 2548 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5828 Q9P2E9 135 Q9P2E9 Q9P2E9 Ribosome-binding protein 1 RRBP1 sp|Q9P2E9|RRBP1_HUMAN Ribosome-binding protein 1 OS=Homo sapiens GN=RRBP1 PE=1 SV=4 0.658637 2.85429 0.0147131 62.694 28.316 62.694 1 S PVATVPAMPQEKLASSPKDKKKKEKKVAKVE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX LAS(0.341)S(0.659)PKDK LAS(-2.85)S(2.85)PKDK 4 3 0.1346 26288 0 0 17969 0 0 27140 0 0 19771 0 0 30447 0 0 23643 0 0 32195 0 0 25589 0 0 20370 0 0 1975.5 0 0 24878 0 0 16985 0 0 27323 0 0 20252 0 0 30716 0 0 23554 0 0 32364 0 0 25652 0 0 20601 0 0 2452.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 96372000 96372000 0 0 NaN 3808 2109 135 135 2298 2427 2616 2924 2616 2924 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10101 2616 2924 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10101 2616 2924 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10101 Q9P2J5 720 Q9P2J5 Q9P2J5 Leucine--tRNA ligase, cytoplasmic LARS sp|Q9P2J5|SYLC_HUMAN Leucine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=LARS PE=1 SV=2 0.497647 0 0.00547765 86.497 33.969 86.497 S RANGHLLLNSEKMSKSTGNFLTLTQAIDKFS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPXX S(0.498)T(0.498)GNFLT(0.005)LTQAIDK S(0)T(0)GNFLT(-20.25)LT(-47.99)QAIDK 1 3 0.70458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3809 2110 720 720 4507 4800 5112 5677 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23416 5112 5677 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23416 5112 5677 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23416 Q9P2K5 17 Q9P2K5 Q9P2K5 Myelin expression factor 2 MYEF2 sp|Q9P2K5|MYEF2_HUMAN Myelin expression factor 2 OS=Homo sapiens GN=MYEF2 PE=1 SV=3 0.999247 31.2288 6.1811E-26 224.84 203.81 224.84 1 S ADANKAEVPGATGGDSPHLQPAEPPGEPRRE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPPXX AEVPGAT(0.001)GGDS(0.999)PHLQPAEPPGEPR AEVPGAT(-31.23)GGDS(31.23)PHLQPAEPPGEPR 11 3 1.7793 7086.8 0 0 8527.7 0 0 7179.5 0 0 8052.3 0 0 30995 0 0 7639.1 0 0 35829 0 0 18377 0 0 8014.5 0 0 25369 0 0 6706.2 0 0 8053.1 0 0 7524.7 0 0 8290.2 0 0 30089 0 0 7857.8 0 0 35477 0 0 18782 0 0 9087.6 0 0 24313 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 64777000 64777000 0 0 NaN 3810 2111 17 17 98;170 104;178 113;191 126;215 191 215 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12923 191 215 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12923 113 126 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13335 Q9P2N5 120 Q9P2N5 Q9P2N5 RNA-binding protein 27 RBM27 sp|Q9P2N5|RBM27_HUMAN RNA-binding protein 27 OS=Homo sapiens GN=RBM27 PE=1 SV=2 0.999717 35.4885 0.0127785 73.781 47.052 73.781 1 S EPAEEERDGRKKKYPSPQKTRSESSERRTRE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX KYPS(1)PQK KY(-35.49)PS(35.49)PQK 4 3 0.065482 24815 0 0 39400 0 0 28539 0 0 37388 0 0 30667 0 0 27366 0 0 32895 0 0 33665 0 0 39759 0 0 4685.9 0 0 23496 0 0 37209 0 0 28553 0 0 38351 0 0 31033 0 0 27965 0 0 33566 0 0 33666 0 0 38939 0 0 5191.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 139070000 139070000 0 0 NaN 3811 2112 120 120 2278 2407 2590 2895 2590 2895 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9611 2590 2895 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9611 2590 2895 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9611 Q9P2N6 515 Q9P2N6 Q9P2N6 KAT8 regulatory NSL complex subunit 3 KANSL3 sp|Q9P2N6|KANL3_HUMAN KAT8 regulatory NSL complex subunit 3 OS=Homo sapiens GN=KANSL3 PE=1 SV=2 0.989144 19.5961 0.00790458 76.01 41.255 76.01 1 S RDLAFEVPERGSRPASPAAKLPASPSGSEDL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX GS(0.011)RPAS(0.989)PAAK GS(-19.6)RPAS(19.6)PAAK 6 3 1.8176 14768 0 0 14241 0 0 16890 0 0 14660 0 0 11539 0 0 14723 0 0 12981 0 0 13558 0 0 13865 0 0 2626.2 0 0 13983 0 0 13456 0 0 16823 0 0 15028 0 0 12047 0 0 14746 0 0 13169 0 0 13723 0 0 13643 0 0 2786.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21148000 21148000 0 0 NaN 3812 2113 515 515 1631 1718 1857 2070 1857 2070 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6017 1857 2070 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6017 1857 2070 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6017 Q9UBB6 2 Q9UBB6 Q9UBB6 Neurochondrin NCDN sp|Q9UBB6|NCDN_HUMAN Neurochondrin OS=Homo sapiens GN=NCDN PE=1 SV=1 1 86.6243 3.72415E-07 86.624 75.473 86.624 1 S ______________MSCCDLAAAGQLGKASI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX S(1)CCDLAAAGQLGK S(86.62)CCDLAAAGQLGK 1 2 -0.42695 9537.6 0 0 12192 0 0 10403 0 0 13918 0 0 10171 0 0 11065 0 0 11251 0 0 12115 0 0 12377 0 0 21080 0 0 9028.3 0 0 11527 0 0 10425 0 0 14139 0 0 10352 0 0 11271 0 0 11432 0 0 12747 0 0 12165 0 0 20130 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12968000 12968000 0 0 NaN 3813 2115 2 2 3638 3868 4122 4579 4122 4579 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16235 4122 4579 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16235 4122 4579 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16235 Q9UBB9 2 Q9UBB9 Q9UBB9 Tuftelin-interacting protein 11 TFIP11 sp|Q9UBB9|TFP11_HUMAN Tuftelin-interacting protein 11 OS=Homo sapiens GN=TFIP11 PE=1 SV=1 0.998449 28.1438 0.00833376 51.572 46.717 51.572 1 S ______________MSLSHLYRDGEGRIDDD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX S(0.998)LS(0.002)HLYR S(28.14)LS(-28.14)HLY(-46.98)R 1 2 0.082641 6256.5 0 0 4082.2 0 0 5944.6 0 0 5215.9 0 0 6697.9 0 0 6158.9 0 0 5236.4 0 0 6577.2 0 0 4900.6 0 0 1932.9 0 0 5919.1 0 0 3862.8 0 0 6010.3 0 0 5301.5 0 0 6731.6 0 0 6140.1 0 0 5391.2 0 0 6639.4 0 0 4849.7 0 0 1972.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7629100 7629100 0 0 NaN 3814 2116 2 2 3986 4250 4537 5045 4537 5045 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13719 4537 5045 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13719 4537 5045 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13719 Q9UBC2 229 Q9UBC2 Q9UBC2 Epidermal growth factor receptor substrate 15-like 1 EPS15L1 sp|Q9UBC2|EP15R_HUMAN Epidermal growth factor receptor substrate 15-like 1 OS=Homo sapiens GN=EPS15L1 PE=1 SV=1 1 76.5753 2.37306E-05 125.82 111.56 115.46 1 S RKKTVFPGAVPVLPASPPPKDSLRSTPSHGS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPXXXXXXX TVFPGAVPVLPAS(1)PPPK T(-76.58)VFPGAVPVLPAS(76.58)PPPK 13 3 0.06743 15347 0 0 11753 0 0 14191 0 0 11169 0 0 9860 0 0 12228 0 0 9618.9 0 0 11600 0 0 11345 0 0 33518 0 0 14518 0 0 11099 0 0 14302 0 0 11521 0 0 10260 0 0 12265 0 0 9850.1 0 0 12669 0 0 11121 0 0 31830 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 73958000 73958000 0 0 NaN 3815 2117 229 229 5003;5004 5333;5334 5683;5684 6313;6314 5683 6313 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22342 5684 6314 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21100 5684 6314 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21100 Q9UBE0 12 Q9UBE0 Q9UBE0 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed SAE1 sp|Q9UBE0|SAE1_HUMAN SUMO-activating enzyme subunit 1 OS=Homo sapiens GN=SAE1 PE=1 SV=1 1 70.729 4.38367E-11 178.91 153.5 178.91 1 S ____MVEKEEAGGGISEEEAAQYDRQIRLWG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPXXXXXX VEKEEAGGGIS(1)EEEAAQYDR VEKEEAGGGIS(70.73)EEEAAQY(-70.73)DR 11 3 -0.5243 6384.2 0 0 9526 0 0 6784.7 0 0 9660.3 0 0 10057 0 0 6617.5 0 0 9540.9 0 0 9980.6 0 0 9411.6 0 0 68337 0 0 6042.6 0 0 8999.7 0 0 6847.8 0 0 9861.8 0 0 10005 0 0 6939.7 0 0 9733.1 0 0 11940 0 0 9291.9 0 0 64578 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14678000 14678000 0 0 0.66878 3816 2118 12 12 5091 5427 5779 6423 5779 6423 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12584 5779 6423 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12584 5779 6423 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12584 Q9UBF1 293 Q9UBF1 Q9UBF1 Melanoma-associated antigen C2 MAGEC2 sp|Q9UBF1|MAGC2_HUMAN Melanoma-associated antigen C2 OS=Homo sapiens GN=MAGEC2 PE=1 SV=1 0.971454 15.3188 7.81858E-11 189.34 162.9 189.34 1 S WVQGHYLEYREVPHSSPPYYEFLWGPRAHSE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPXXXX EVPHS(0.029)S(0.971)PPYYEFLWGPR EVPHS(-15.32)S(15.32)PPY(-89.59)Y(-110.02)EFLWGPR 6 3 0.39109 5050.6 0 0 13995 0 0 6203.2 0 0 13741 0 0 5783.6 0 0 6922.4 0 0 6687.6 0 0 11037 0 0 15920 0 0 29549 0 0 4783.5 0 0 13219 0 0 6176.5 0 0 14015 0 0 5915.5 0 0 7350.2 0 0 7016.8 0 0 11802 0 0 15317 0 0 28079 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29886000 29886000 0 0 NaN 3817 2119 293 293 1215 1278 1377 1528 1377 1528 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23103 1377 1528 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23103 1377 1528 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23103 Q9UBF8 266 Q9UBF8 Q9UBF8 Phosphatidylinositol 4-kinase beta PI4KB sp|Q9UBF8|PI4KB_HUMAN Phosphatidylinositol 4-kinase beta OS=Homo sapiens GN=PI4KB PE=1 SV=1 0.622957 2.75286 9.64282E-06 134.34 106.18 134.34 1 S KRELPSLSPAPDTGLSPSKRTHQRSKSDATA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXPPPPPPPPPPPPPPPPPPXXXXXXXXXXX ELPSLSPAPDT(0.331)GLS(0.623)PS(0.046)KR ELPS(-62.49)LS(-34.93)PAPDT(-2.75)GLS(2.75)PS(-11.28)KR 14 3 2.3468 12616 0 0 9670.9 0 0 13959 0 0 10925 0 0 10562 0 0 14177 0 0 12710 0 0 10832 0 0 10294 0 0 14149 0 0 11943 0 0 9142.9 0 0 13941 0 0 11194 0 0 10947 0 0 14050 0 0 12768 0 0 11422 0 0 10260 0 0 13574 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13534000 13534000 0 0 NaN 3818 2120 266 266 1041 1097 1185 1304 1185 1304 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17179 1185 1304 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17179 1185 1304 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17179 Q9UBF8 511 Q9UBF8 Q9UBF8 Phosphatidylinositol 4-kinase beta PI4KB sp|Q9UBF8|PI4KB_HUMAN Phosphatidylinositol 4-kinase beta OS=Homo sapiens GN=PI4KB PE=1 SV=1 1 65.2883 3.44741E-07 163.45 138.73 163.45 1 S KEPVFIAAGDIRRRLSEQLAHTPTAFKRDPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX RLS(1)EQLAHTPTAFK RLS(65.29)EQLAHT(-65.29)PT(-104.76)AFK 3 3 0.85886 21633 0 0 18206 0 0 23113 0 0 17163 0 0 23838 0 0 20294 0 0 24213 0 0 20943 0 0 20340 0 0 8502 0 0 20476 0 0 17192 0 0 23198 0 0 17736 0 0 24150 0 0 20226 0 0 24523 0 0 21239 0 0 20234 0 0 8490.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 90548000 90548000 0 0 NaN 3819 2120 511 511 3321 3523 3760 4176 3760 4176 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15408 3760 4176 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15408 3760 4176 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15408 Q9UBF8 277 Q9UBF8 Q9UBF8 Phosphatidylinositol 4-kinase beta PI4KB sp|Q9UBF8|PI4KB_HUMAN Phosphatidylinositol 4-kinase beta OS=Homo sapiens GN=PI4KB PE=1 SV=1 0.935794 11.6368 1.11463E-41 334.43 290.42 334.43 1 S DTGLSPSKRTHQRSKSDATASISLSSNLKRT X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX S(0.064)KS(0.936)DATASISLSSNLK S(-11.64)KS(11.64)DAT(-49.18)AS(-116.69)IS(-177.4)LS(-233.43)S(-255.4)NLK 3 3 0.44137 11474 0 0 12247 0 0 12500 0 0 13494 0 0 10063 0 0 12211 0 0 11445 0 0 13520 0 0 14265 0 0 39090 0 0 10861 0 0 11577 0 0 12501 0 0 13759 0 0 10378 0 0 12387 0 0 11661 0 0 14689 0 0 13956 0 0 37121 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19498000 19498000 0 0 NaN 3820 2120 277 277 3896 4151 4430 4924 4430 4924 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16408 4430 4924 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16408 4430 4924 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16408 Q9UBF8 428 Q9UBF8 Q9UBF8 Phosphatidylinositol 4-kinase beta PI4KB sp|Q9UBF8|PI4KB_HUMAN Phosphatidylinositol 4-kinase beta OS=Homo sapiens GN=PI4KB PE=1 SV=1 1 95.4126 1.00095E-22 269.81 225.36 269.81 1 S SVPARIPENRIRSTRSVENLPECGITHEQRA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPX S(1)VENLPECGITHEQR S(95.41)VENLPECGIT(-95.41)HEQR 1 2 0.49555 9589.5 0 0 7759.9 0 0 10675 0 0 8408.4 0 0 9461.2 0 0 10474 0 0 8966.6 0 0 10096 0 0 9119.3 0 0 5089.8 0 0 9078.2 0 0 7334.2 0 0 10671 0 0 8627.1 0 0 9666.1 0 0 10412 0 0 9155.2 0 0 10295 0 0 8991.5 0 0 5026.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17827000 17827000 0 0 NaN 3821 2120 428 428 4552 4856 5173 5745 5173 5745 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12102 5173 5745 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12102 5173 5745 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12102 Q9UBL3 623 Q9UBL3 Q9UBL3 Set1/Ash2 histone methyltransferase complex subunit ASH2 ASH2L sp|Q9UBL3|ASH2L_HUMAN Set1/Ash2 histone methyltransferase complex subunit ASH2 OS=Homo sapiens GN=ASH2L PE=1 SV=1 1 119.068 0.00143123 119.07 93.446 119.07 1 S ADVLYHVETEVDGRRSPPWEP__________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPXXXXXXXXXX RS(1)PPWEP RS(119.07)PPWEP 2 2 0.33895 30093 0 0 39711 0 0 29942 0 0 38875 0 0 32258 0 0 27653 0 0 30755 0 0 35991 0 0 40042 0 0 9267.5 0 0 28475 0 0 37509 0 0 30184 0 0 39786 0 0 32586 0 0 28341 0 0 31633 0 0 36058 0 0 39115 0 0 9559.4 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 147270000 147270000 0 0 NaN 3822 2122 623 623 3481 3698 3944 4380;4381 3944 4380 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14466 3944 4380 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14466 3944 4380 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14466 Q9UBM7 14 Q9UBM7 Q9UBM7 7-dehydrocholesterol reductase DHCR7 sp|Q9UBM7|DHCR7_HUMAN 7-dehydrocholesterol reductase OS=Homo sapiens GN=DHCR7 PE=1 SV=1 0.999984 47.9151 0.000171651 101.9 63.385 101.9 1 S __MAAKSQPNIPKAKSLDGVTNDRTASQGQW X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX AKS(1)LDGVTNDR AKS(47.92)LDGVT(-47.92)NDR 3 3 -0.31631 24133 0 0 43534 0 0 28776 0 0 50519 0 0 66078 0 0 27136 0 0 57384 0 0 45404 0 0 49685 0 0 1871.7 0 0 22854 0 0 41165 0 0 29149 0 0 51069 0 0 64723 0 0 28476 0 0 58618 0 0 44892 0 0 49350 0 0 2813.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 46013000 46013000 0 0 NaN 3823 2123 14 14 273 294 315 351 315 351 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10610 315 351 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10610 315 351 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10610 Q9UBP0 268 Q9UBP0 Q9UBP0 Spastin SPAST sp|Q9UBP0|SPAST_HUMAN Spastin OS=Homo sapiens GN=SPAST PE=1 SV=1 0.946834 12.5064 2.30279E-07 166.3 151.33 166.3 1 S MKTGSAGLSGHHRAPSYSGLSMVSGVKQGSG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX APS(0.947)YS(0.053)GLSMVSGVK APS(12.51)Y(-78.21)S(-12.51)GLS(-96.1)MVS(-153.47)GVK 3 3 -0.57491 14493 0 0 15356 0 0 13656 0 0 14733 0 0 12280 0 0 15466 0 0 13975 0 0 16162 0 0 18851 0 0 13901 0 0 13711 0 0 14502 0 0 13785 0 0 15178 0 0 12572 0 0 15505 0 0 14278 0 0 16604 0 0 18393 0 0 13464 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 44978000 44978000 0 0 NaN 3824 2124 268 268 380 406;407 441;442 490;491 442 491 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19653 442 491 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19653 442 491 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19653 Q9UBQ5 217 Q9UBQ5 Q9UBQ5 Eukaryotic translation initiation factor 3 subunit K EIF3K sp|Q9UBQ5|EIF3K_HUMAN Eukaryotic translation initiation factor 3 subunit K OS=Homo sapiens GN=EIF3K PE=1 SV=1 0.999451 32.6051 1.22856E-15 224.43 206.27 152.74 1 S VEKIDFDSVSSIMASSQ______________ X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPXXXXXXXXXXXXXX IDFDSVSSIMAS(0.001)S(0.999)Q IDFDS(-114.44)VS(-98.4)S(-89.65)IMAS(-32.61)S(32.61)Q 13 2 -1.223 29198 0 0 31690 0 0 33210 0 0 30825 0 0 31942 0 0 33526 0 0 33717 0 0 41941 0 0 33565 0 0 212180 0 0 27643 0 0 29931 0 0 33198 0 0 31746 0 0 32515 0 0 33990 0 0 34232 0 0 48137 0 0 33125 0 0 200760 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 55867000 55867000 0 0 NaN 3825 2126 217 217 1789 1888;1889 2035;2036 2267;2268;2269 2035 2267 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20443 2036 2269 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23673 2036 2269 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23673 Q9UBS0 423 Q9UBS0 Q9UBS0 Ribosomal protein S6 kinase beta-2 RPS6KB2 sp|Q9UBS0|KS6B2_HUMAN Ribosomal protein S6 kinase beta-2 OS=Homo sapiens GN=RPS6KB2 PE=1 SV=2 1 74.1727 0.0182144 74.173 49.035 74.173 1 S LRSPRRLNSSPRAPVSPLKFSPFEGFRPSPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX APVS(1)PLK APVS(74.17)PLK 4 2 0.2265 28933 0 0 40564 0 0 31674 0 0 40265 0 0 23134 0 0 30859 0 0 22600 0 0 32001 0 0 44269 0 0 6369.5 0 0 27389 0 0 38318 0 0 31630 0 0 41210 0 0 23993 0 0 31378 0 0 23623 0 0 32247 0 0 42761 0 0 6738.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 105660000 105660000 0 0 NaN 3826 2127 423 423 387 414 449 498 449 498 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13612 449 498 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13612 449 498 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13612 Q9UBS9 1081 Q9UBS9 Q9UBS9 SUN domain-containing ossification factor SUCO sp|Q9UBS9|SUCO_HUMAN SUN domain-containing ossification factor OS=Homo sapiens GN=SUCO PE=1 SV=1 0.90197 9.66431 0.00642664 80.905 56.553 80.905 1 S MNLKRRTSFPLMRSKSLQLTGKEVDPNDLYI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX S(0.097)KS(0.902)LQLT(0.001)GK S(-9.66)KS(9.66)LQLT(-31.88)GK 3 3 -0.52896 10807 0 0 17426 0 0 9595.7 0 0 17541 0 0 16299 0 0 9091.1 0 0 15941 0 0 14095 0 0 21913 0 0 2134.2 0 0 10222 0 0 16462 0 0 9813.3 0 0 17868 0 0 16145 0 0 9556.3 0 0 16408 0 0 14009 0 0 21368 0 0 2335.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14332000 14332000 0 0 NaN 3827 2128 1081 1081 3902 4159 4439 4934 4439 4934 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13223 4439 4934 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13223 4439 4934 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13223 Q9UBU7 357 Q9UBU7 Q9UBU7 Protein DBF4 homolog A DBF4 sp|Q9UBU7|DBF4A_HUMAN Protein DBF4 homolog A OS=Homo sapiens GN=DBF4 PE=1 SV=1 0.649892 2.76777 0.00963798 78.794 57.237 78.794 1 S EKDTPKKKRIKYSVGSLSPVSASVLKKTEQK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPXXXX YS(0.001)VGS(0.65)LS(0.344)PVS(0.006)ASVLKK Y(-36.15)S(-29.45)VGS(2.77)LS(-2.77)PVS(-20.67)AS(-42.59)VLKK 5 3 0.78352 12812 0 0 18894 0 0 14378 0 0 17685 0 0 11564 0 0 13922 0 0 11544 0 0 16199 0 0 22525 0 0 19815 0 0 12129 0 0 17841 0 0 14353 0 0 18172 0 0 11912 0 0 14188 0 0 12053 0 0 16757 0 0 21760 0 0 19033 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14584000 14584000 0 0 NaN 3828 2130 357 357 5446;5447 5802;5803 6197 6897 6197 6897 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19749 6197 6897 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19749 6197 6897 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19749 Q9UBU7 359 Q9UBU7 Q9UBU7 Protein DBF4 homolog A DBF4 sp|Q9UBU7|DBF4A_HUMAN Protein DBF4 homolog A OS=Homo sapiens GN=DBF4 PE=1 SV=1 0.996903 25.0984 5.44816E-08 173.51 141.87 173.51 1 S DTPKKKRIKYSVGSLSPVSASVLKKTEQKEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPXXXXXXX YSVGS(0.003)LS(0.997)PVSASVLK Y(-126)S(-48.1)VGS(-25.1)LS(25.1)PVS(-74.93)AS(-124.47)VLK 7 3 -0.46629 5100.3 0 0 12781 0 0 5529.6 0 0 9509.7 0 0 4388.6 0 0 6641.6 0 0 5529.4 0 0 8986.7 0 0 11559 0 0 8605.8 0 0 4827.8 0 0 12056 0 0 5531.5 0 0 9917.8 0 0 4542.7 0 0 6830.9 0 0 5738.8 0 0 9182.8 0 0 11150 0 0 8311.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12412000 12412000 0 0 NaN 3829 2130 359 359 5446;5447 5802;5803 6196 6896 6196 6896 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20934 6196 6896 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20934 6196 6896 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20934 Q9UBW5 357 Q9UBW5 Q9UBW5 Bridging integrator 2 BIN2 sp|Q9UBW5|BIN2_HUMAN Bridging integrator 2 OS=Homo sapiens GN=BIN2 PE=1 SV=3 0.997925 27.3252 3.7615E-18 221.21 198.72 221.21 1 S GPAQAQPSPTTERAKSQEEVLPSSTTPSPGG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP AKS(0.998)QEEVLPS(0.002)STTPSPGGALSPSGQPSSSATEVVLR AKS(27.33)QEEVLPS(-27.33)S(-37.44)T(-44.32)T(-49.84)PS(-78.99)PGGALS(-159.44)PS(-181.19)GQPS(-203.31)S(-206.83)S(-210.04)AT(-214.81)EVVLR 3 4 1.2217 5158.5 0 0 3730.4 0 0 6381.4 0 0 4288.8 0 0 12011 0 0 6419.8 0 0 13499 0 0 8567 0 0 5519.2 0 0 37505 0 0 4885.8 0 0 3527.2 0 0 6427.1 0 0 4403.8 0 0 11870 0 0 6437.4 0 0 13451 0 0 9640.2 0 0 5784.3 0 0 35514 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 34274000 34274000 0 0 NaN 3830 2131 357 357 279 300 321 358;359 321 358 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17495 321 358 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17495 321 358 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17495 Q9UBW5 444 Q9UBW5 Q9UBW5 Bridging integrator 2 BIN2 sp|Q9UBW5|BIN2_HUMAN Bridging integrator 2 OS=Homo sapiens GN=BIN2 PE=1 SV=3 0.999117 30.5669 2.13987E-34 315.86 295.09 315.86 1 S SSGNIPSSPTASGGGSPTSPRASLGTGTASP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX ATASPRPSSGNIPSSPTASGGGS(0.999)PT(0.001)SPR AT(-189.81)AS(-174.65)PRPS(-150.01)S(-151.99)GNIPS(-88.75)S(-77.48)PT(-71.82)AS(-53.39)GGGS(30.57)PT(-30.57)S(-59.4)PR 23 3 0.2641 17992 0 0 9809.8 0 0 22677 0 0 11446 0 0 36653 0 0 20688 0 0 41677 0 0 25428 0 0 10250 0 0 10420 0 0 17043 0 0 9276.3 0 0 22746 0 0 11801 0 0 36412 0 0 20403 0 0 41321 0 0 25636 0 0 11447 0 0 10400 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 98382000 98382000 0 0 NaN 3831 2131 444 444 519;2987 552;3166 592;3389 659;3759 592 659 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8965 592 659 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8965 592 659 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8965 Q9UBW5 406 Q9UBW5 Q9UBW5 Bridging integrator 2 BIN2 sp|Q9UBW5|BIN2_HUMAN Bridging integrator 2 OS=Homo sapiens GN=BIN2 PE=1 SV=3 1 56.3592 0.0381 56.359 20.025 56.359 1 S TRTASEGSEQPKKRASIQRTSAPPSRPPPPR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX KRAS(1)IQR KRAS(56.36)IQR 4 3 0.059019 69225 0 0 5487.5 0 0 72997 0 0 5648 0 0 127710 0 0 69584 0 0 117400 0 0 67063 0 0 5813.6 0 0 3912.2 0 0 65518 0 0 5184.7 0 0 73938 0 0 6816.7 0 0 126120 0 0 66869 0 0 116940 0 0 67484 0 0 10469 0 0 5235.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 108020000 108020000 0 0 NaN 3832 2131 406 406 2191 2315 2492 2775 2492 2775 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5725 2492 2775 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5725 2492 2775 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5725 Q9UBW5 259 Q9UBW5 Q9UBW5 Bridging integrator 2 BIN2 sp|Q9UBW5|BIN2_HUMAN Bridging integrator 2 OS=Homo sapiens GN=BIN2 PE=1 SV=3 0.999733 35.7299 0.000594375 106.4 78.001 106.4 1 S NKVFVVKGLSSSSRRSLVISPPVRTATVSSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(1)LVISPPVR S(35.73)LVIS(-35.73)PPVR 1 2 -0.30327 13065 0 0 6636.7 0 0 14843 0 0 7946.6 0 0 14127 0 0 13055 0 0 14665 0 0 11904 0 0 7206.9 0 0 5872.4 0 0 12370 0 0 6277 0 0 14836 0 0 8161.5 0 0 14379 0 0 12854 0 0 14697 0 0 12162 0 0 7427.4 0 0 5805.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 60821000 60821000 0 0 NaN 3833 2131 259 259 4020 4285 4573 5081 4573 5081 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17007 4573 5081 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17007 4573 5081 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17007 Q9UBW5 273 Q9UBW5 Q9UBW5 Bridging integrator 2 BIN2 sp|Q9UBW5|BIN2_HUMAN Bridging integrator 2 OS=Homo sapiens GN=BIN2 PE=1 SV=3 0.861022 8.09788 1.10536E-07 150.64 128.77 150.64 1 S RSLVISPPVRTATVSSPLTSPTSPSTLSLKS X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPX T(0.002)AT(0.004)VS(0.133)S(0.861)PLTSPTSPSTLSLK T(-26.45)AT(-23.78)VS(-8.1)S(8.1)PLT(-58.08)S(-77.53)PT(-99.29)S(-105.96)PS(-117.81)T(-119.88)LS(-121.83)LK 6 3 -0.46154 6365.3 0 0 3223 0 0 7408.9 0 0 3866.8 0 0 14881 0 0 7112.5 0 0 17977 0 0 8911.9 0 0 3147.6 0 0 9743.5 0 0 6027.1 0 0 3048.4 0 0 7497.7 0 0 3983.2 0 0 14689 0 0 7025.2 0 0 17744 0 0 9163.2 0 0 3734.7 0 0 9380.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24589000 24589000 0 0 NaN 3834 2131 273 273 4643 4954 5277 5863 5277 5863 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18597 5277 5863 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18597 5277 5863 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18597 Q9UBW7 305 Q9UBW7 Q9UBW7 Zinc finger MYM-type protein 2 ZMYM2 sp|Q9UBW7|ZMYM2_HUMAN Zinc finger MYM-type protein 2 OS=Homo sapiens GN=ZMYM2 PE=1 SV=1 0.978232 16.5282 0.000165782 101.61 80.555 101.61 1 S ASFPRNQKQPGVDSLSPVASLPKQIFQPSVQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPXXXXXXXX QPGVDS(0.022)LS(0.978)PVASLPK QPGVDS(-16.53)LS(16.53)PVAS(-49.8)LPK 8 3 0.19465 8078.1 0 0 5418.8 0 0 7285.7 0 0 5837 0 0 5963.4 0 0 8170 0 0 7114.3 0 0 7389.9 0 0 5996.6 0 0 5475.2 0 0 7641 0 0 5121.3 0 0 7367.8 0 0 6005.2 0 0 6144.9 0 0 8085.6 0 0 7155.8 0 0 7607.8 0 0 5964.3 0 0 5326.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12254000 12254000 0 0 NaN 3835 2132 305 305 3099 3287 3517 3899 3517 3899 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18595 3517 3899 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18595 3517 3899 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18595 Q9UBZ9 1097 Q9UBZ9 Q9UBZ9 DNA repair protein REV1 REV1 sp|Q9UBZ9|REV1_HUMAN DNA repair protein REV1 OS=Homo sapiens GN=REV1 PE=1 SV=1 1 67.704 0.0219832 67.704 32.435 67.704 1 S SPKRIQSPLNNKLLNSPAKTLPGACGSPQKL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX LLNS(1)PAK LLNS(67.7)PAK 4 2 -0.15609 19926 0 0 21611 0 0 22001 0 0 21440 0 0 10971 0 0 23744 0 0 11088 0 0 17440 0 0 20509 0 0 5924.5 0 0 18862 0 0 20414 0 0 21900 0 0 22061 0 0 11795 0 0 23630 0 0 11539 0 0 17916 0 0 19837 0 0 5982.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11344000 11344000 0 0 NaN 3836 2133 1097 1097 2444 2582 2776 3099 2776 3099 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14292 2776 3099 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14292 2776 3099 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14292 Q9UDY2 266 Q9UDY2 Q9UDY2 Tight junction protein ZO-2 TJP2 sp|Q9UDY2|ZO2_HUMAN Tight junction protein ZO-2 OS=Homo sapiens GN=TJP2 PE=1 SV=2 0.999992 50.747 0.000713354 128.12 74.955 128.12 1 S RAYHRAYDPDYERAYSPEYRRGARHDARSRG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX AYS(1)PEYR AY(-76.66)S(50.75)PEY(-50.75)R 3 2 1.2726 31979 0 0 85272 0 0 36814 0 0 73025 0 0 19980 0 0 33829 0 0 18761 0 0 45623 0 0 91355 0 0 4633.5 0 0 30279 0 0 80484 0 0 36584 0 0 75098 0 0 21321 0 0 35815 0 0 21143 0 0 45445 0 0 87061 0 0 5418.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 80197000 80197000 0 0 NaN 3837 2134 266 266 591 630 671 746 671 746 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9364 671 746 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9364 671 746 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9364 Q9UDY2 244 Q9UDY2 Q9UDY2 Tight junction protein ZO-2 TJP2 sp|Q9UDY2|ZO2_HUMAN Tight junction protein ZO-2 OS=Homo sapiens GN=TJP2 PE=1 SV=2 1 83.4948 0.000169029 115.09 89.374 115.09 1 S FGPSRDRDRDRSRGRSIDQDYERAYHRAYDP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX GRS(1)IDQDYER GRS(83.49)IDQDY(-83.49)ER 3 3 -0.29294 10309 0 0 10283 0 0 10452 0 0 11413 0 0 7894.2 0 0 0 0 0 0 0 0 10498 0 0 10301 0 0 2591.6 0 0 9755.4 0 0 9720 0 0 10470 0 0 11466 0 0 8060.2 0 0 0 0 0 0 0 0 10202 0 0 9727.1 0 0 2683.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 15448000 15448000 0 0 NaN 3838 2134 244 244 1593 1679 1815 2016 1815 2016 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7432 1815 2016 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7432 1815 2016 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7432 Q9UDY2 170 Q9UDY2 Q9UDY2 Tight junction protein ZO-2 TJP2 sp|Q9UDY2|ZO2_HUMAN Tight junction protein ZO-2 OS=Homo sapiens GN=TJP2 PE=1 SV=2 0.995718 23.7547 2.7335E-06 147.96 112.31 147.96 1 S YSERSRLNSHGGRSRSWEDSPERGRPHERAR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX S(0.004)RS(0.996)WEDSPER S(-23.75)RS(23.75)WEDS(-40.57)PER 3 2 0.43938 10571 0 0 17570 0 0 8825.1 0 0 18054 0 0 11592 0 0 8775.3 0 0 10255 0 0 12364 0 0 18683 0 0 6125.1 0 0 9996.3 0 0 16601 0 0 9018.1 0 0 18359 0 0 11589 0 0 9266.6 0 0 10734 0 0 12448 0 0 18077 0 0 6053.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12488000 12488000 0 0 NaN 3839 2134 170 170 4308 4593 4894 5437 4894 5437 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7886 4894 5437 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7886 4894 5437 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7886 Q9UER7 671 Q9UER7 Q9UER7 Death domain-associated protein 6 DAXX sp|Q9UER7|DAXX_HUMAN Death domain-associated protein 6 OS=Homo sapiens GN=DAXX PE=1 SV=2 0.999989 51.4805 2.68702E-12 184.94 172.11 184.94 1 S HEKNGKKICTLPSPPSPLASLAPVADSSTRV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPPPPPX ICTLPSPPS(1)PLASLAPVADSSTR ICT(-76.75)LPS(-51.48)PPS(51.48)PLAS(-53.74)LAPVADS(-108.24)S(-106.85)T(-106.85)R 9 3 0.57174 21399 0 0 35948 0 0 26692 0 0 33177 0 0 18802 0 0 26465 0 0 20290 0 0 31250 0 0 32437 0 0 69869 0 0 20268 0 0 33943 0 0 26479 0 0 34126 0 0 19579 0 0 27018 0 0 20914 0 0 33266 0 0 31491 0 0 66513 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 294410000 294410000 0 0 NaN 3840 2135 671 671 1783;2090 1882;2211 2029;2380 2260;2652 2029 2260 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23302 2029 2260 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23302 2029 2260 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23302 Q9UER7 654 Q9UER7 Q9UER7 Death domain-associated protein 6 DAXX sp|Q9UER7|DAXX_HUMAN Death domain-associated protein 6 OS=Homo sapiens GN=DAXX PE=1 SV=2 1 74.9442 0.0105123 74.944 29.807 74.944 1 S TGSGPLGNSYVERQRSVHEKNGKKICTLPSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX QRS(1)VHEK QRS(74.94)VHEK 3 3 -0.15014 9065.1 0 0 8931.1 0 0 10006 0 0 8682.8 0 0 6303.9 0 0 9410 0 0 9125.9 0 0 8759.1 0 0 9613.9 0 0 4231.3 0 0 8581.5 0 0 8435.4 0 0 9981.5 0 0 8942 0 0 6656.2 0 0 9399.4 0 0 9167.2 0 0 8938.7 0 0 9465.3 0 0 4186.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24129000 24129000 0 0 NaN 3841 2135 654 654 3132 3323 3553 3938 3553 3938 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5142 3553 3938 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5142 3553 3938 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5142 Q9UER7 688 Q9UER7 Q9UER7 Death domain-associated protein 6 DAXX sp|Q9UER7|DAXX_HUMAN Death domain-associated protein 6 OS=Homo sapiens GN=DAXX PE=1 SV=2 0.987701 19.0475 2.05494E-31 292.49 273.2 292.49 1 S LASLAPVADSSTRVDSPSHGLVTSSLCIPSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP VDS(0.988)PS(0.012)HGLVTSSLCIPSPAR VDS(19.05)PS(-19.05)HGLVT(-116.52)S(-148.28)S(-180.5)LCIPS(-251.87)PAR 3 3 -0.25187 10002 0 0 15305 0 0 10803 0 0 13352 0 0 11288 0 0 9797.8 0 0 15219 0 0 14000 0 0 14731 0 0 11862 0 0 9467.3 0 0 14447 0 0 10845 0 0 13772 0 0 11482 0 0 10055 0 0 15289 0 0 14238 0 0 14556 0 0 11494 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 79280000 79280000 0 0 NaN 3842 2135 688 688 5078 5413 5765 6407 5765 6407 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18070 5765 6407 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18070 5765 6407 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18070 Q9UEY8 681 Q9UEY8 Q9UEY8 Gamma-adducin ADD3 sp|Q9UEY8|ADDG_HUMAN Gamma-adducin OS=Homo sapiens GN=ADD3 PE=1 SV=1 0.844867 9.65331 8.97328E-09 175.23 136.99 175.23 1 S EKIEEVLSPEGSPSKSPSKKKKKFRTPSFLK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXPPPPPPPPPPPPPPPPPXXXXXXXXXXXX IEEVLSPEGS(0.027)PS(0.092)KS(0.845)PS(0.037)K IEEVLS(-38.11)PEGS(-15.03)PS(-9.65)KS(9.65)PS(-13.59)K 14 3 0.17163 18497 0 0 24840 0 0 21655 0 0 26357 0 0 24845 0 0 23907 0 0 27710 0 0 25388 0 0 28286 0 0 16924 0 0 17515 0 0 23474 0 0 21669 0 0 26930 0 0 25066 0 0 24123 0 0 28085 0 0 25918 0 0 27886 0 0 16524 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 43880000 43880000 0 0 NaN 3843 2136 681 681 1813 1913 2067 2317 2067 2317 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17058 2067 2317 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17058 2067 2317 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17058 Q9UFC0 251 Q9UFC0 Q9UFC0 Leucine-rich repeat and WD repeat-containing protein 1 LRWD1 sp|Q9UFC0|LRWD1_HUMAN Leucine-rich repeat and WD repeat-containing protein 1 OS=Homo sapiens GN=LRWD1 PE=1 SV=2 0.961564 13.9824 1.02901E-17 224.14 207.65 224.14 1 S DDVPLSLSPSKRACASPSAQVEGSPVAGSDG X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP ACAS(0.962)PS(0.038)AQVEGSPVAGSDGSQPAVK ACAS(13.98)PS(-13.98)AQVEGS(-104.17)PVAGS(-167)DGS(-180.25)QPAVK 4 3 0.87543 11125 0 0 17380 0 0 13100 0 0 17290 0 0 12754 0 0 12493 0 0 13256 0 0 17420 0 0 18153 0 0 6772.9 0 0 10535 0 0 16418 0 0 13075 0 0 17682 0 0 12975 0 0 12811 0 0 13604 0 0 17486 0 0 17704 0 0 6780.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 73562000 73562000 0 0 NaN 3844 2137 251 251 91 97 106 119 106 119 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12871 106 119 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12871 106 119 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12871 Q9UFC0 259 Q9UFC0 Q9UFC0 Leucine-rich repeat and WD repeat-containing protein 1 LRWD1 sp|Q9UFC0|LRWD1_HUMAN Leucine-rich repeat and WD repeat-containing protein 1 OS=Homo sapiens GN=LRWD1 PE=1 SV=2 0.999973 46.5756 9.53367E-08 150.62 134.13 150.62 1 S PSKRACASPSAQVEGSPVAGSDGSQPAVKLE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPPPPPPPXX ACASPSAQVEGS(1)PVAGSDGSQPAVK ACAS(-53.5)PS(-46.58)AQVEGS(46.58)PVAGS(-64.88)DGS(-82.71)QPAVK 12 3 -1.1228 6016.4 0 0 6877.9 0 0 5692.2 0 0 7525.9 0 0 7785.4 0 0 5631.3 0 0 6011.3 0 0 6587.2 0 0 7596 0 0 5225.2 0 0 5691.8 0 0 6501 0 0 5772.7 0 0 7657.3 0 0 7753.5 0 0 5750.9 0 0 6247.6 0 0 6727.8 0 0 7427.8 0 0 5072.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15838000 15838000 0 0 NaN 3845 2137 259 259 91 97 105 118 105 118 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11980 105 118 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11980 105 118 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11980 Q9UFC0 243 Q9UFC0 Q9UFC0 Leucine-rich repeat and WD repeat-containing protein 1 LRWD1 sp|Q9UFC0|LRWD1_HUMAN Leucine-rich repeat and WD repeat-containing protein 1 OS=Homo sapiens GN=LRWD1 PE=1 SV=2 0.994106 22.7427 2.81745E-07 168.62 131.45 168.62 1 S RLAALKRPDDVPLSLSPSKRACASPSAQVEG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPXXXXXXXXXXX RPDDVPLS(0.001)LS(0.994)PS(0.005)KR RPDDVPLS(-32.13)LS(22.74)PS(-22.74)KR 10 3 0.31477 19644 0 0 29833 0 0 18495 0 0 25661 0 0 14570 0 0 20020 0 0 15136 0 0 20113 0 0 26262 0 0 10264 0 0 18584 0 0 28158 0 0 18642 0 0 26512 0 0 15036 0 0 20339 0 0 15685 0 0 20480 0 0 25441 0 0 10130 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 125580000 125580000 0 0 NaN 3846 2137 243 243 3379;3380 3587;3588 3827;3828 4250;4251 3828 4251 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13560 3828 4251 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13560 3828 4251 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13560 Q9UFW8 164 Q9UFW8 Q9UFW8 CGG triplet repeat-binding protein 1 CGGBP1 sp|Q9UFW8|CGBP1_HUMAN CGG triplet repeat-binding protein 1 OS=Homo sapiens GN=CGGBP1 PE=1 SV=2 1 101.745 1.90244E-05 128.55 121.52 128.55 1 S AYLPDGYENENQLLNSQDC____________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX AYLPDGYENENQLLNS(1)QDC AY(-124.2)LPDGY(-101.74)ENENQLLNS(101.74)QDC 16 3 0.66761 4569.2 0 0 5365.9 0 0 6763.3 0 0 5033 0 0 5199.9 0 0 6432.6 0 0 6578.5 0 0 6388.8 0 0 5902.8 0 0 14641 0 0 4331.9 0 0 5067 0 0 6667.6 0 0 5210.6 0 0 5388 0 0 6412.3 0 0 6611.7 0 0 6851.3 0 0 5853 0 0 13934 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29569000 29569000 0 0 NaN 3847 2138 164 164 586 624 665 740 665 740 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19684 665 740 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19684 665 740 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19684 Q9UGP4 387 Q9UGP4 Q9UGP4 LIM domain-containing protein 1 LIMD1 sp|Q9UGP4|LIMD1_HUMAN LIM domain-containing protein 1 OS=Homo sapiens GN=LIMD1 PE=1 SV=1 0.364945 0 0.0210063 65.854 41.567 65.854 S PGCTDLGTGPKLSPTSLVHPVMSTLPELSCK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LS(0.27)PT(0.365)S(0.365)LVHPVMSTLPELSCK LS(-1.31)PT(0)S(0)LVHPVMS(-54.49)T(-54.49)LPELS(-60.95)CK 5 3 2.6851 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3848 2139 387 387 2579 2723 2921 3255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23410 2921 3255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23410 2921 3255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23410 Q9UGP4 314 Q9UGP4 Q9UGP4 LIM domain-containing protein 1 LIMD1 sp|Q9UGP4|LIMD1_HUMAN LIM domain-containing protein 1 OS=Homo sapiens GN=LIMD1 PE=1 SV=1 0.558396 1.18544 0.000117077 107.54 88.921 93.969 1 S APLALSCPRQGGLPRSNSGLGGEVSGVMSKP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.558)NS(0.425)GLGGEVS(0.005)GVMS(0.012)KPNVDPQPWFQDGPK S(1.19)NS(-1.19)GLGGEVS(-20.83)GVMS(-16.68)KPNVDPQPWFQDGPK 1 4 0.045694 7153 0 0 9330.5 0 0 6296.3 0 0 9677.2 0 0 8592.4 0 0 6782.9 0 0 6939.3 0 0 9864.2 0 0 8544.2 0 0 38249 0 0 6765.4 0 0 8816.2 0 0 6414.3 0 0 9868.6 0 0 8562.2 0 0 7038.7 0 0 7186.9 0 0 10928 0 0 8362.5 0 0 36244 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 16985000 16985000 0 0 NaN 3849 2139 314 314 4057 4325;4326 4614;4615 5124;5125 4615 5125 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21904 4614 5124 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19835 4614 5124 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19835 Q9UGP4 272 Q9UGP4 Q9UGP4 LIM domain-containing protein 1 LIMD1 sp|Q9UGP4|LIMD1_HUMAN LIM domain-containing protein 1 OS=Homo sapiens GN=LIMD1 PE=1 SV=1 0.580943 1.4186 0.00937388 77.065 65.433 77.065 1 S EKPTGLWSTASSQRVSPGLPSPNLENGAPAV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP VS(0.581)PGLPS(0.419)PNLENGAPAVGPVQPR VS(1.42)PGLPS(-1.42)PNLENGAPAVGPVQPR 2 3 -3.6468 6115.1 0 0 7910.1 0 0 7136.7 0 0 7821.7 0 0 6968.8 0 0 6933.3 0 0 7434.2 0 0 6571.6 0 0 8305.8 0 0 27649 0 0 5790.3 0 0 7471.9 0 0 7126.3 0 0 8022.2 0 0 7089.3 0 0 7036.8 0 0 7568.9 0 0 7438.9 0 0 8158.4 0 0 26187 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30017000 30017000 0 0 NaN 3850 2139 272 272 5262 5608 5978 6642 5978 6642 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18706 5978 6642 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18706 5978 6642 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18706 Q9UGU0 1322 Q9UGU0 Q9UGU0 Transcription factor 20 TCF20 sp|Q9UGU0|TCF20_HUMAN Transcription factor 20 OS=Homo sapiens GN=TCF20 PE=1 SV=3 0.999618 34.175 9.39025E-05 135.72 55.042 135.72 1 S DIKSIPKRDSSKDLPSPDSRNCPAVTLTSPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX DLPS(1)PDSR DLPS(34.18)PDS(-34.18)R 4 2 -0.40408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3851 2140 1322 1322 743 787 838 925 838 925 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9488 838 925 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9488 838 925 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9488 Q9UGU0 574 Q9UGU0 Q9UGU0 Transcription factor 20 TCF20 sp|Q9UGU0|TCF20_HUMAN Transcription factor 20 OS=Homo sapiens GN=TCF20 PE=1 SV=3 1 56.9362 0.0368411 56.936 7.9382 56.936 1 S SPAQGAQNEPPRLNASPAAREEATSPGAKDM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX LNAS(1)PAAR LNAS(56.94)PAAR 4 2 0.68108 32553 0 0 31719 0 0 29873 0 0 27532 0 0 28837 0 0 35760 0 0 26390 0 0 27637 0 0 31114 0 0 4819.2 0 0 30794 0 0 29940 0 0 30217 0 0 28657 0 0 29295 0 0 35384 0 0 27110 0 0 28181 0 0 30500 0 0 5177.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 36996000 36996000 0 0 NaN 3852 2140 574 574 2472 2610 2804 3131 2804 3131 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8278 2804 3131 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8278 2804 3131 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8278 Q9UGU0 1335 Q9UGU0 Q9UGU0 Transcription factor 20 TCF20 sp|Q9UGU0|TCF20_HUMAN Transcription factor 20 OS=Homo sapiens GN=TCF20 PE=1 SV=3 0.499945 0 0.000208887 106.14 93.003 106.14 1 S LPSPDSRNCPAVTLTSPAKTKILPPRKGRGL X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NCPAVTLT(0.5)S(0.5)PAK NCPAVT(-36.55)LT(0)S(0)PAK 9 3 -0.062465 12215 0 0 12356 0 0 15036 0 0 15558 0 0 10477 0 0 13742 0 0 11150 0 0 13049 0 0 15084 0 0 4333.8 0 0 11569 0 0 11691 0 0 14923 0 0 15750 0 0 10915 0 0 13855 0 0 11425 0 0 13247 0 0 14717 0 0 4382.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23728000 23728000 0 0 NaN 3853 2140 1335 1335 2783 2952 3162 3513 3162 3513 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13709 3162 3513 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13709 3162 3513 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13709 Q9UH92 7 Q9UH92 Q9UH92 Max-like protein X MLX sp|Q9UH92|MLX_HUMAN Max-like protein X OS=Homo sapiens GN=MLX PE=1 SV=2 0.993569 21.8892 0.00698313 81.647 51.588 81.647 1 S _________MTEPGASPEDPWVKASPVGAHA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPXXXXXXXX T(0.006)EPGAS(0.994)PEDPWVK T(-21.89)EPGAS(21.89)PEDPWVK 6 2 0.24227 6137.6 0 0 6613.4 0 0 4938.3 0 0 6027.8 0 0 5959.3 0 0 6197.5 0 0 6779 0 0 6148.1 0 0 6559.1 0 0 33041 0 0 5803.2 0 0 6244.1 0 0 5055.6 0 0 6227.7 0 0 5998.6 0 0 6266.1 0 0 6855.1 0 0 7164.5 0 0 6481.2 0 0 31254 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5368700 5368700 0 0 NaN 3854 2142 7 7 4688 4999 5325 5917 5325 5917 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18703 5325 5917 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18703 5325 5917 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18703 Q9UH99 47 Q9UH99 Q9UH99 SUN domain-containing protein 2 SUN2 sp|Q9UH99|SUN2_HUMAN SUN domain-containing protein 2 OS=Homo sapiens GN=SUN2 PE=1 SV=3 0.5 0 0.0287599 61.161 28.841 61.161 1 S STLFKDSPLRTLKRKSSNMKRLSPAPQLGPS X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX RKS(0.5)S(0.5)NMK RKS(0)S(0)NMK 3 3 1.0859 21447 0 0 11313 0 0 21990 0 0 12657 0 0 13832 0 0 25020 0 0 14151 0 0 16133 0 0 12219 0 0 2858.9 0 0 20297 0 0 10694 0 0 22013 0 0 13112 0 0 14521 0 0 24420 0 0 14337 0 0 16613 0 0 12138 0 0 3065.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15323000 15323000 0 0 NaN 3855 2143 47 47 3306 3507 3744 4160 3744 4160 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6491 3744 4160 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6491 3744 4160 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6491 Q9UH99 48 Q9UH99 Q9UH99 SUN domain-containing protein 2 SUN2 sp|Q9UH99|SUN2_HUMAN SUN domain-containing protein 2 OS=Homo sapiens GN=SUN2 PE=1 SV=3 0.5 0 0.0287599 61.161 28.841 61.161 1 S TLFKDSPLRTLKRKSSNMKRLSPAPQLGPSS X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RKS(0.5)S(0.5)NMK RKS(0)S(0)NMK 4 3 1.0859 21447 0 0 11313 0 0 21990 0 0 12657 0 0 13832 0 0 25020 0 0 14151 0 0 16133 0 0 12219 0 0 2858.9 0 0 20297 0 0 10694 0 0 22013 0 0 13112 0 0 14521 0 0 24420 0 0 14337 0 0 16613 0 0 12138 0 0 3065.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15323000 15323000 0 0 NaN 3856 2143 48 48 3306 3507 3744 4160 3744 4160 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6491 3744 4160 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6491 3744 4160 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6491 Q9UH99 38 Q9UH99 Q9UH99 SUN domain-containing protein 2 SUN2 sp|Q9UH99|SUN2_HUMAN SUN domain-containing protein 2 OS=Homo sapiens GN=SUN2 PE=1 SV=3 0.99942 33.3852 1.44243E-45 344.08 317.51 344.08 1 S GGSSVAGSQSTLFKDSPLRTLKRKSSNMKRL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX YSQGDDDGSSSSGGSSVAGSQSTLFKDS(0.999)PLR Y(-332.85)S(-302.25)QGDDDGS(-211.48)S(-204.76)S(-189.75)S(-167.22)GGS(-120.07)S(-106.74)VAGS(-54.88)QS(-39.26)T(-33.39)LFKDS(33.39)PLR 28 3 -0.57057 1564.2 0 0 1117.4 0 0 1789.5 0 0 1045.1 0 0 1192.4 0 0 1521.8 0 0 0 0 0 2306.7 0 0 1058.9 0 0 41838 0 0 1481 0 0 1055.1 0 0 1779.4 0 0 1085.2 0 0 1229.5 0 0 1592.7 0 0 0 0 0 3544 0 0 999.92 0 0 39449 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 12200000 12200000 0 0 NaN 3857 2143 38 38 5443 5799 6193 6893 6193 6893 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16011 6193 6893 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16011 6193 6893 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16011 Q9UHB6 490 Q9UHB6 Q9UHB6 LIM domain and actin-binding protein 1 LIMA1 sp|Q9UHB6|LIMA1_HUMAN LIM domain and actin-binding protein 1 OS=Homo sapiens GN=LIMA1 PE=1 SV=1 0.99998 46.9003 6.69926E-16 227 200.19 227 1 S LERPAQLANARETPHSPGVEDAPIAKVGVLA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPXXXXX ETPHS(1)PGVEDAPIAK ET(-46.9)PHS(46.9)PGVEDAPIAK 5 3 -0.14709 71876 0 0 96429 0 0 73359 0 0 99553 0 0 99249 0 0 79485 0 0 98728 0 0 91849 0 0 113130 0 0 39459 0 0 68019 0 0 91111 0 0 74099 0 0 101700 0 0 99195 0 0 80796 0 0 100920 0 0 92841 0 0 111020 0 0 39281 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 272140000 272140000 0 0 NaN 3858 2144 490 490 1189 1250 1348 1492;1493 1348 1492 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12072 1348 1492 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12072 1348 1492 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12072 Q9UHB6 225 Q9UHB6 Q9UHB6 LIM domain and actin-binding protein 1 LIMA1 sp|Q9UHB6|LIMA1_HUMAN LIM domain and actin-binding protein 1 OS=Homo sapiens GN=LIMA1 PE=1 SV=1 0.999736 35.7886 3.20597E-19 249.23 214.41 249.23 1 S KILRAQSRSASGRKISENSYSLDDLEIGPGQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP KIS(1)ENSYSLDDLEIGPGQLSSSTFDSEKNESR KIS(35.79)ENS(-35.79)Y(-102.4)S(-62.73)LDDLEIGPGQLS(-207.62)S(-211.28)S(-214.3)T(-215.09)FDS(-218.72)EKNES(-230.57)R 3 4 0.84185 2162.8 0 0 7710.9 0 0 7340.5 0 0 6940.2 0 0 8681.2 0 0 5706 0 0 7829 0 0 10630 0 0 8849.7 0 0 172290 0 0 2049.4 0 0 7279.9 0 0 7108.6 0 0 7153.2 0 0 8719.5 0 0 6160.7 0 0 8038.1 0 0 15663 0 0 8688.7 0 0 162470 0 0 2 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 55852000 55852000 0 0 NaN 3859 2144 225 225 2096;2097 2217;2218 2387;2388;2389 2660;2661;2662;2663 2389 2663 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20823 2389 2663 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20823 2389 2663 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20823 Q9UHB6 132 Q9UHB6 Q9UHB6 LIM domain and actin-binding protein 1 LIMA1 sp|Q9UHB6|LIMA1_HUMAN LIM domain and actin-binding protein 1 OS=Homo sapiens GN=LIMA1 PE=1 SV=1 1 41.8695 0.043115 41.87 9.8072 41.87 1 S KADQEEQIHPRSRLRSPPEALVQGRYPHIKD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX LRS(1)PPEALVQGR LRS(41.87)PPEALVQGR 3 3 1.5605 19142 0 0 20889 0 0 18548 0 0 20943 0 0 21110 0 0 18313 0 0 21559 0 0 21303 0 0 23686 0 0 8838.7 0 0 18111 0 0 19734 0 0 18743 0 0 21458 0 0 21280 0 0 18527 0 0 21982 0 0 21519 0 0 23280 0 0 8815.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11585000 11585000 0 0 NaN 3860 2144 132 132 2541 2685 2882 3214 2882 3214 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13667 2882 3214 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13667 2882 3214 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13667 Q9UHB6 583 Q9UHB6 Q9UHB6 LIM domain and actin-binding protein 1 LIMA1 sp|Q9UHB6|LIMA1_HUMAN LIM domain and actin-binding protein 1 OS=Homo sapiens GN=LIMA1 PE=1 SV=1 0.999373 33.2082 0.000778307 125.75 45.058 125.75 1 S PEDVDLDLKKLRRSSSLKERSRPFTVAASFQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX SSS(0.999)LKER S(-38.26)S(-33.21)S(33.21)LKER 3 2 -0.1333 37483 0 0 55051 0 0 33559 0 0 49708 0 0 84390 0 0 35148 0 0 89886 0 0 60074 0 0 51838 0 0 8932.2 0 0 35454 0 0 51975 0 0 34650 0 0 51131 0 0 82680 0 0 36210 0 0 90190 0 0 59562 0 0 52762 0 0 9801 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 135150000 135150000 0 0 NaN 3861 2144 583 583 3510;4432 3727;4723 3973;5027 4412;5576 5027 5576 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6773 5027 5576 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6773 5027 5576 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6773 Q9UHB6 362 Q9UHB6 Q9UHB6 LIM domain and actin-binding protein 1 LIMA1 sp|Q9UHB6|LIMA1_HUMAN LIM domain and actin-binding protein 1 OS=Homo sapiens GN=LIMA1 PE=1 SV=1 0.990931 20.3846 4.96119E-05 119.83 92.676 119.83 1 S QVKSEVQQPVHPKPLSPDSRASSLSESSPPK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPXXXXXXXXXXX SEVQQPVHPKPLS(0.991)PDS(0.009)R S(-86.8)EVQQPVHPKPLS(20.38)PDS(-20.38)R 13 3 1.5044 42101 0 0 49248 0 0 47367 0 0 55049 0 0 54631 0 0 48553 0 0 55552 0 0 55579 0 0 60492 0 0 18812 0 0 39858 0 0 46556 0 0 47484 0 0 56064 0 0 55029 0 0 49080 0 0 56638 0 0 56044 0 0 59478 0 0 19000 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 55416000 55416000 0 0 NaN 3862 2144 362 362 3728 3969 4232;4233 4705;4706 4232 4705 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10149 4232 4705 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10149 4232 4705 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10149 Q9UHB6 604 Q9UHB6 Q9UHB6 LIM domain and actin-binding protein 1 LIMA1 sp|Q9UHB6|LIMA1_HUMAN LIM domain and actin-binding protein 1 OS=Homo sapiens GN=LIMA1 PE=1 SV=1 0.974358 16.8728 3.67188E-05 119.14 91.99 119.14 1 S RPFTVAASFQSTSVKSPKTVSPPIRKGWSMS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX SRPFTVAASFQS(0.002)T(0.004)S(0.02)VKS(0.974)PK S(-96.04)RPFT(-101.2)VAAS(-73.59)FQS(-28.03)T(-23.77)S(-16.87)VKS(16.87)PK 17 4 -1.1688 5941.1 0 0 6457.3 0 0 5521.2 0 0 6548.2 0 0 7122.8 0 0 5625.9 0 0 6824.3 0 0 6375.7 0 0 5573 0 0 16115 0 0 5620.2 0 0 6100.5 0 0 5602.8 0 0 6703.1 0 0 7128.3 0 0 5720.1 0 0 6926.6 0 0 6851.8 0 0 5552 0 0 15322 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12961000 12961000 0 0 NaN 3863 2144 604 604 4270 4549 4848 5380 4848 5380 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15969 4848 5380 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15969 4848 5380 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15969 Q9UHB7 549 Q9UHB7 Q9UHB7 AF4/FMR2 family member 4 AFF4 sp|Q9UHB7|AFF4_HUMAN AF4/FMR2 family member 4 OS=Homo sapiens GN=AFF4 PE=1 SV=1 0.999895 40.0213 0.00010473 115.57 96.246 115.57 1 S KTIQKGSESGRGRQKSPAQSDSTTQRRTVGK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX QKS(1)PAQSDSTTQR QKS(40.02)PAQS(-40.02)DS(-53.75)T(-59.35)T(-63.46)QR 3 3 -0.43027 4558.2 0 0 6662.6 0 0 4722.9 0 0 7993.8 0 0 7610.2 0 0 5610.8 0 0 7620.5 0 0 6533.3 0 0 8214 0 0 2376.1 0 0 4313.9 0 0 6301.5 0 0 4781.6 0 0 8088.2 0 0 7553 0 0 5746.4 0 0 7772.8 0 0 6589.2 0 0 8079.5 0 0 2388.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12634000 12634000 0 0 NaN 3864 2145 549 549 3058 3244 3471 3845 3471 3845 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5506 3471 3845 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5506 3471 3845 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5506 Q9UHB7 620 Q9UHB7 Q9UHB7 AF4/FMR2 family member 4 AFF4 sp|Q9UHB7|AFF4_HUMAN AF4/FMR2 family member 4 OS=Homo sapiens GN=AFF4 PE=1 SV=1 0.744083 4.63597 0.00976919 69.554 53.673 69.554 1 S TKGSRKPNIKKESKSSPRPTAEKKKYKSTSK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPXXXXXXXX S(0.256)S(0.744)PRPTAEK S(-4.64)S(4.64)PRPT(-42.23)AEK 2 3 -0.1086 11476 0 0 13099 0 0 9896.5 0 0 14779 0 0 12267 0 0 10220 0 0 12460 0 0 13065 0 0 13960 0 0 4692.9 0 0 10853 0 0 12384 0 0 10085 0 0 14998 0 0 12313 0 0 10492 0 0 12715 0 0 13136 0 0 13711 0 0 4721.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15359000 15359000 0 0 NaN 3865 2145 620 620 4397 4685 4989 5536 4989 5536 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6411 4989 5536 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6411 4989 5536 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6411 Q9UHB7 836 Q9UHB7 Q9UHB7 AF4/FMR2 family member 4 AFF4 sp|Q9UHB7|AFF4_HUMAN AF4/FMR2 family member 4 OS=Homo sapiens GN=AFF4 PE=1 SV=1 0.774677 7.19998 0.027928 59.935 20.67 59.935 1 S SKDPKTEHGSRKRTISQSSSLKSSSNSNKET X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX T(0.044)IS(0.775)QS(0.148)S(0.029)S(0.006)LK T(-12.51)IS(7.2)QS(-7.2)S(-14.33)S(-21.38)LK 3 2 1.3603 28222 0 0 31648 0 0 32756 0 0 33994 0 0 27755 0 0 30792 0 0 29008 0 0 28209 0 0 33992 0 0 14183 0 0 26722 0 0 29910 0 0 32663 0 0 34709 0 0 28483 0 0 31002 0 0 29604 0 0 28823 0 0 33329 0 0 14008 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15940000 15940000 0 0 NaN 3866 2145 836 836 4756 5073 5406 6010 5406 6010 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12481 5406 6010 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12481 5406 6010 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12481 Q9UHD8 85 Q9UHD8 Q9UHD8 Septin-9 SEPT9 sp|Q9UHD8|SEPT9_HUMAN Septin-9 OS=Homo sapiens GN=SEPT9 PE=1 SV=2 0.999915 40.7678 5.17874E-05 127.71 101.67 127.71 1 S NSEPSARHVDSLSQRSPKASLRRVELSGPKA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX HVDSLSQRS(1)PK HVDS(-60.6)LS(-40.77)QRS(40.77)PK 9 3 -0.15324 8719.8 0 0 12294 0 0 9244.7 0 0 9428.7 0 0 8557.3 0 0 12409 0 0 23315 0 0 21466 0 0 11011 0 0 4444.7 0 0 8253.1 0 0 11597 0 0 9298.1 0 0 9903.8 0 0 8921.6 0 0 12427 0 0 22687 0 0 21315 0 0 11387 0 0 4682 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 42957000 42957000 0 0 NaN 3867 2146 85 85 1760 1859 2006 2236 2006 2236 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7462 2006 2236 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7462 2006 2236 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7462 Q9UHD8 30 Q9UHD8 Q9UHD8 Septin-9 SEPT9 sp|Q9UHD8|SEPT9_HUMAN Septin-9 OS=Homo sapiens GN=SEPT9 PE=1 SV=2 1 96.9087 1.55224E-10 176.42 150.17 176.42 1 S RLRRLGDSSGPALKRSFEVEEVETPNSTPPR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(1)FEVEEVETPNSTPPR S(96.91)FEVEEVET(-96.91)PNS(-142.12)T(-148.09)PPR 1 3 3.2436 27777 0 0 37525 0 0 30313 0 0 33876 0 0 30683 0 0 32185 0 0 29712 0 0 37101 0 0 37798 0 0 37800 0 0 26294 0 0 35428 0 0 30380 0 0 34978 0 0 31109 0 0 32469 0 0 30512 0 0 38163 0 0 36952 0 0 36452 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 29785000 29785000 0 0 NaN 3868 2146 30 30 3739;3740 3979;3980 4243;4244 4716;4717;4718;4719 4243 4717 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15749 4243 4717 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15749 4243 4717 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15749 Q9UMX0;Q9UHD9 586;621 Q9UMX0 Q9UMX0 Ubiquilin-1;Ubiquilin-2 UBQLN1;UBQLN2 sp|Q9UMX0|UBQL1_HUMAN Ubiquilin-1 OS=Homo sapiens GN=UBQLN1 PE=1 SV=2;sp|Q9UHD9|UBQL2_HUMAN Ubiquilin-2 OS=Homo sapiens GN=UBQLN2 PE=1 SV=2 0.999861 38.5568 0.0252167 63.48 62.13 63.48 1 S ATGGDINAAIERLLGSQPS____________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX LLGS(1)QPS LLGS(38.56)QPS(-38.56) 4 2 -0.39957 3479 0 0 3665.4 0 0 5461.7 0 0 4299.8 0 0 5244.7 0 0 4499.4 0 0 5569.3 0 0 5433.4 0 0 3965.4 0 0 2232.6 0 0 3299.5 0 0 3466.2 0 0 5383.6 0 0 4379.4 0 0 5338.2 0 0 4517 0 0 5609.5 0 0 5481.2 0 0 3980.7 0 0 2228 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5766600 5766600 0 0 NaN 3869 2147 586 586 2434 2572 2766 3089 2766 3089 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15459 2766 3089 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15459 2766 3089 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15459 Q9UHI6 500 Q9UHI6 Q9UHI6 Probable ATP-dependent RNA helicase DDX20 DDX20 sp|Q9UHI6|DDX20_HUMAN Probable ATP-dependent RNA helicase DDX20 OS=Homo sapiens GN=DDX20 PE=1 SV=2 0.83845 7.16287 0.00805019 86.43 58.516 86.43 1 S IQKAHGDHMASSRNNSVSGLSVKSKNNTKQK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX NNS(0.838)VS(0.161)GLSVK NNS(7.16)VS(-7.16)GLS(-33.06)VK 3 2 0.49403 45335 0 0 25149 0 0 43992 0 0 23909 0 0 19566 0 0 48345 0 0 22492 0 0 29785 0 0 26189 0 0 36591 0 0 42893 0 0 23750 0 0 44081 0 0 25017 0 0 21342 0 0 47205 0 0 22855 0 0 31699 0 0 25684 0 0 35144 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30679000 30679000 0 0 NaN 3870 2148 500 500 2879 3052 3269 3625 3269 3625 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13286 3269 3625 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13286 3269 3625 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13286 Q9UHI6 714 Q9UHI6 Q9UHI6 Probable ATP-dependent RNA helicase DDX20 DDX20 sp|Q9UHI6|DDX20_HUMAN Probable ATP-dependent RNA helicase DDX20 OS=Homo sapiens GN=DDX20 PE=1 SV=2 0.999999 58.7641 0.000233531 106.32 79.186 106.32 1 S PPNGSDTPNPEKYQESPGIQMKTRLKEGASQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX YQES(1)PGIQMK Y(-58.76)QES(58.76)PGIQMK 4 3 -0.43031 10578 0 0 11399 0 0 11024 0 0 10265 0 0 8129.5 0 0 11123 0 0 8438.1 0 0 10533 0 0 12960 0 0 4085.1 0 0 10011 0 0 10762 0 0 11040 0 0 10622 0 0 8429.4 0 0 11111 0 0 8698.3 0 0 10711 0 0 12596 0 0 4090.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16186000 16186000 0 0 NaN 3871 2148 714 714 5414 5767 6157 6852 6157 6852 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14204 6157 6852 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14204 6157 6852 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14204 Q9UHR4 414 Q9UHR4 Q9UHR4 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 BAIAP2L1 sp|Q9UHR4|BI2L1_HUMAN Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 OS=Homo sapiens GN=BAIAP2L1 PE=1 SV=2 0.602837 2.83445 6.20268E-08 156.7 142.97 156.7 1 S LLEENETEAVTVPTPSPTPVRSISTVNLSEN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX LLEENETEAVTVPT(0.314)PS(0.603)PT(0.083)PVR LLEENET(-78.58)EAVT(-39.49)VPT(-2.83)PS(2.83)PT(-8.6)PVR 16 3 0.14478 6787.7 0 0 11662 0 0 7689 0 0 9557.4 0 0 7443.8 0 0 6413.5 0 0 6121.6 0 0 8367 0 0 12525 0 0 32205 0 0 6426.3 0 0 11004 0 0 7685.1 0 0 9891.1 0 0 7555.8 0 0 6654 0 0 6470.1 0 0 9287.4 0 0 12087 0 0 30519 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 50541000 50541000 0 0 NaN 3872 2149 414 414 2432 2570 2764 3086;3087 2764 3087 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19208 2764 3087 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19208 2764 3087 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19208 Q9UHY1 2 Q9UHY1 Q9UHY1 Nuclear receptor-binding protein NRBP1 sp|Q9UHY1|NRBP_HUMAN Nuclear receptor-binding protein OS=Homo sapiens GN=NRBP1 PE=1 SV=1 0.49985 0 1.03323E-10 91.961 78.507 91.961 S ______________MSEGESQTVLSSGSDPK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.5)EGES(0.5)QTVLSSGSDPK S(0)EGES(0)QT(-32.25)VLS(-54.78)S(-61.39)GS(-65.67)DPK 1 2 -0.028154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3873 2151 2 2 3687 3922 4182 4648 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12949 4182 4648 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12949 4182 4648 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12949 Q9UHY1 6 Q9UHY1 Q9UHY1 Nuclear receptor-binding protein NRBP1 sp|Q9UHY1|NRBP_HUMAN Nuclear receptor-binding protein OS=Homo sapiens GN=NRBP1 PE=1 SV=1 0.49985 0 1.03323E-10 91.961 78.507 91.961 S __________MSEGESQTVLSSGSDPKVESS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.5)EGES(0.5)QTVLSSGSDPK S(0)EGES(0)QT(-32.25)VLS(-54.78)S(-61.39)GS(-65.67)DPK 5 2 -0.028154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3874 2151 6 6 3687 3922 4182 4648 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12949 4182 4648 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12949 4182 4648 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12949 Q9UI08 331 Q9UI08 Q9UI08 Ena/VASP-like protein EVL sp|Q9UI08|EVL_HUMAN Ena/VASP-like protein OS=Homo sapiens GN=EVL PE=1 SV=2 0.970274 15.1382 0.000126381 113.33 97.787 113.33 1 S PNSSEAGRKPWERSNSVEKPVSSILSRTPSV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX S(0.03)NS(0.97)VEKPVSSILSR S(-15.14)NS(15.14)VEKPVS(-55.32)S(-58.14)ILS(-85.81)R 3 3 -0.1061 18227 0 0 6353.1 0 0 22597 0 0 6218 0 0 17712 0 0 21504 0 0 19104 0 0 16641 0 0 5473.1 0 0 6806 0 0 17263 0 0 6000.8 0 0 22445 0 0 6638.3 0 0 18270 0 0 20825 0 0 19006 0 0 17086 0 0 5978.4 0 0 6793.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 655690000 655690000 0 0 NaN 3875 2152 331 331 4066 4336 4626 5139 4626 5139 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16086 4626 5139 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16086 4626 5139 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16086 Q9UI08 349 Q9UI08 Q9UI08 Ena/VASP-like protein EVL sp|Q9UI08|EVL_HUMAN Ena/VASP-like protein OS=Homo sapiens GN=EVL PE=1 SV=2 0.999904 40.1051 0.0113689 88.319 68.925 88.319 2 S KPVSSILSRTPSVAKSPEAKSPLQSQPHSRM X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX T(0.983)PS(0.017)VAKS(1)PEAK T(17.57)PS(-17.57)VAKS(40.11)PEAK 7 3 0.83106 0 66403 0 0 12752 0 0 61266 0 0 13160 0 0 22449 0 0 64832 0 0 26929 0 0 38551 0 0 13339 0 0 49473 0 0 62815 0 0 12048 0 0 61520 0 0 14318 0 0 25123 0 0 62442 0 0 26824 0 0 41179 0 0 13738 0 0 47477 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 54575000 0 54575000 0 NaN 3876 2152 349 349 4861 5186 5525 6143 5525 6143 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10739 5525 6143 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10739 5525 6143 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10739 Q9UI36 493 Q9UI36 Q9UI36 Dachshund homolog 1 DACH1 sp|Q9UI36|DACH1_HUMAN Dachshund homolog 1 OS=Homo sapiens GN=DACH1 PE=1 SV=3 0.998041 27.0702 1.40737E-22 262.42 234.13 262.42 1 S PSRVETSVIKERVPDSPSPAPSLEEGRRPGS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPXXXX VPDS(0.998)PS(0.002)PAPSLEEGR VPDS(27.07)PS(-27.07)PAPS(-96.53)LEEGR 4 2 0.89768 37595 0 0 22536 0 0 41180 0 0 23192 0 0 32683 0 0 41338 0 0 35036 0 0 32372 0 0 23654 0 0 27274 0 0 35588 0 0 21292 0 0 41160 0 0 24064 0 0 33691 0 0 40564 0 0 35239 0 0 33640 0 0 23822 0 0 26431 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 50849000 50849000 0 0 NaN 3877 2154 493 493 1143;5203 1203;5547 1295;5911 1424;1425;6568 5911 6568 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13263 5911 6568 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13263 5911 6568 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13263 Q9UID6 200 Q9UID6 Q9UID6 Zinc finger protein 639 ZNF639 sp|Q9UID6|ZN639_HUMAN Zinc finger protein 639 OS=Homo sapiens GN=ZNF639 PE=1 SV=1 0.499956 0 0.00259588 99.5 59.878 99.5 1 S LNVTAQQKWPLLRANSSGLYKCELCEFNSKY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX ANS(0.5)S(0.5)GLYK ANS(0)S(0)GLY(-37.54)K 3 2 -0.14356 45815 0 0 35033 0 0 49803 0 0 30234 0 0 33872 0 0 50158 0 0 36835 0 0 39889 0 0 36417 0 0 6952.2 0 0 43368 0 0 33067 0 0 49730 0 0 31656 0 0 35356 0 0 49271 0 0 37342 0 0 40619 0 0 35951 0 0 7469.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 58506000 58506000 0 0 NaN 3878 2155 200 200 347 373 404 445 404 445 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11507 404 445 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11507 404 445 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11507 Q9UID6 201 Q9UID6 Q9UID6 Zinc finger protein 639 ZNF639 sp|Q9UID6|ZN639_HUMAN Zinc finger protein 639 OS=Homo sapiens GN=ZNF639 PE=1 SV=1 0.499956 0 0.00259588 99.5 59.878 99.5 1 S NVTAQQKWPLLRANSSGLYKCELCEFNSKYF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ANS(0.5)S(0.5)GLYK ANS(0)S(0)GLY(-37.54)K 4 2 -0.14356 45815 0 0 35033 0 0 49803 0 0 30234 0 0 33872 0 0 50158 0 0 36835 0 0 39889 0 0 36417 0 0 6952.2 0 0 43368 0 0 33067 0 0 49730 0 0 31656 0 0 35356 0 0 49271 0 0 37342 0 0 40619 0 0 35951 0 0 7469.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 58506000 58506000 0 0 NaN 3879 2155 201 201 347 373 404 445 404 445 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11507 404 445 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11507 404 445 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11507 Q9UID6 88 Q9UID6 Q9UID6 Zinc finger protein 639 ZNF639 sp|Q9UID6|ZN639_HUMAN Zinc finger protein 639 OS=Homo sapiens GN=ZNF639 PE=1 SV=1 1 87.4093 5.58513E-07 145 112.39 145 1 S DGIKARNRNQNYLVPSPVLRILDHTAFSTEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX NQNYLVPS(1)PVLR NQNY(-87.41)LVPS(87.41)PVLR 8 2 -0.29353 8925.3 0 0 9384.7 0 0 7943.1 0 0 8791.6 0 0 7163.5 0 0 8596.1 0 0 6316 0 0 8184.5 0 0 10174 0 0 18420 0 0 8441.9 0 0 8862 0 0 8043.6 0 0 9060 0 0 7307.2 0 0 8654.5 0 0 6575.5 0 0 8780.6 0 0 9874.9 0 0 17534 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8993200 8993200 0 0 NaN 3880 2155 88 88 2895 3069 3287 3644 3287 3644 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18282 3287 3644 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18282 3287 3644 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18282 Q9UIF8 1465 Q9UIF8 Q9UIF8 Bromodomain adjacent to zinc finger domain protein 2B BAZ2B sp|Q9UIF8|BAZ2B_HUMAN Bromodomain adjacent to zinc finger domain protein 2B OS=Homo sapiens GN=BAZ2B PE=1 SV=3 0.998242 27.5419 5.82693E-07 148.75 131.45 148.75 1 S LKEKDNTNLFLQKPGSFSKLSKLLEVAKMPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX DNTNLFLQKPGS(0.998)FS(0.002)K DNT(-110.48)NLFLQKPGS(27.54)FS(-27.54)K 12 3 1.2678 25466 0 0 11097 0 0 25888 0 0 10025 0 0 14401 0 0 26107 0 0 14283 0 0 17880 0 0 12076 0 0 13480 0 0 24099 0 0 10477 0 0 25903 0 0 10617 0 0 15289 0 0 25372 0 0 14484 0 0 18660 0 0 12009 0 0 13106 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15887000 15887000 0 0 NaN 3881 2156 1465 1465 771 817 872 963 872 963 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19300 872 963 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19300 872 963 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19300 Q9UIF8 1680 Q9UIF8 Q9UIF8 Bromodomain adjacent to zinc finger domain protein 2B BAZ2B sp|Q9UIF8|BAZ2B_HUMAN Bromodomain adjacent to zinc finger domain protein 2B OS=Homo sapiens GN=BAZ2B PE=1 SV=3 0.782978 5.57247 0.0256156 53.388 28.533 53.388 1 S GNSFLTSNVASSKSESPVPQNEKATSAQPAA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX S(0.217)ES(0.783)PVPQNEK S(-5.57)ES(5.57)PVPQNEK 3 3 -0.17303 10380 0 0 8815.5 0 0 9609 0 0 8590.7 0 0 9151.3 0 0 9669.6 0 0 8198.4 0 0 9216.5 0 0 8299 0 0 2395 0 0 9819.3 0 0 8326.4 0 0 9712.6 0 0 8851.7 0 0 9300.4 0 0 9643 0 0 8393.8 0 0 9334.5 0 0 8184.4 0 0 2468.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5784100 5784100 0 0 NaN 3882 2156 1680 1680 3714 3949 4209 4676 4209 4676 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8371 4209 4676 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8371 4209 4676 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8371 Q9UIF9 1783 Q9UIF9 Q9UIF9 Bromodomain adjacent to zinc finger domain protein 2A BAZ2A sp|Q9UIF9|BAZ2A_HUMAN Bromodomain adjacent to zinc finger domain protein 2A OS=Homo sapiens GN=BAZ2A PE=1 SV=4 0.98249 17.4969 0.00363695 95.094 40.896 95.094 1 S RESPAAGPRYSEEGLSPSKRRRLSMRNHHSD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX YSEEGLS(0.982)PS(0.017)K Y(-57.54)S(-46.1)EEGLS(17.5)PS(-17.5)K 7 2 0.38403 36085 0 0 31836 0 0 38193 0 0 33368 0 0 17261 0 0 39576 0 0 17906 0 0 30593 0 0 33768 0 0 11136 0 0 34153 0 0 30083 0 0 38082 0 0 34268 0 0 18777 0 0 39300 0 0 18630 0 0 31371 0 0 32646 0 0 11194 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 32711000 32711000 0 0 NaN 3883 2157 1783 1783 5423 5776 6166 6862 6166 6862 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12393 6166 6862 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12393 6166 6862 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12393 Q9UIG0 947 Q9UIG0 Q9UIG0 Tyrosine-protein kinase BAZ1B BAZ1B sp|Q9UIG0|BAZ1B_HUMAN Tyrosine-protein kinase BAZ1B OS=Homo sapiens GN=BAZ1B PE=1 SV=2 0.992266 21.0825 1.092E-22 265.34 244.91 265.34 1 S SIDYRFNHHCKDHTVSGDEDYCPRSKKANLG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPXXXXXXX DHT(0.008)VS(0.992)GDEDYCPR DHT(-21.08)VS(21.08)GDEDY(-115.07)CPR 5 2 0.089549 6924.7 0 0 15140 0 0 7389.9 0 0 13576 0 0 7873.2 0 0 8823.6 0 0 9200.8 0 0 9295 0 0 14091 0 0 3986.1 0 0 6554.3 0 0 14293 0 0 7422.9 0 0 13958 0 0 7984.6 0 0 9069.9 0 0 9435.8 0 0 9425.4 0 0 13696 0 0 3968.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10761000 10761000 0 0 NaN 3884 2158 947 947 698 742 792 874 792 874 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7891 792 874 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7891 792 874 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7891 Q9UIG0 349 Q9UIG0 Q9UIG0 Tyrosine-protein kinase BAZ1B BAZ1B sp|Q9UIG0|BAZ1B_HUMAN Tyrosine-protein kinase BAZ1B OS=Homo sapiens GN=BAZ1B PE=1 SV=2 0.999406 32.5498 0.000392769 130.01 34.483 130.01 1 S PKLWCHVHLKKSLSGSPLKVKNSKNSKSPEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX SLS(0.001)GS(0.999)PLK S(-44.2)LS(-32.55)GS(32.55)PLK 5 2 -0.16651 150970 0 0 202040 0 0 143020 0 0 188040 0 0 97312 0 0 151210 0 0 110260 0 0 153750 0 0 204270 0 0 23926 0 0 142830 0 0 190780 0 0 143940 0 0 193340 0 0 101720 0 0 153290 0 0 114190 0 0 154840 0 0 197570 0 0 26087 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 244090000 244090000 0 0 NaN 3885 2158 349 349 2214;3984 2340;4247 2521;4532 2814;5038;5039 4532 5038 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13611 4532 5038 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13611 4532 5038 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13611 Q9UIG0 1468 Q9UIG0 Q9UIG0 Tyrosine-protein kinase BAZ1B BAZ1B sp|Q9UIG0|BAZ1B_HUMAN Tyrosine-protein kinase BAZ1B OS=Homo sapiens GN=BAZ1B PE=1 SV=2 1 89.5863 6.92658E-05 112.58 81.162 112.58 1 S KRKKFPDRLAEDEGDSEPEAVGQSRGRRQKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPXXXXXX LAEDEGDS(1)EPEAVGQSR LAEDEGDS(89.59)EPEAVGQS(-89.59)R 8 3 0.41312 12465 0 0 11811 0 0 12338 0 0 11844 0 0 11602 0 0 13178 0 0 11170 0 0 11752 0 0 11536 0 0 5430 0 0 11795 0 0 11157 0 0 12421 0 0 12181 0 0 11811 0 0 13142 0 0 11401 0 0 12007 0 0 11367 0 0 5385 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 41456000 41456000 0 0 NaN 3886 2158 1468 1468 2285 2414 2598 2903 2598 2903 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11275 2598 2903 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11275 2598 2903 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11275 Q9UIG0 312 Q9UIG0 Q9UIG0 Tyrosine-protein kinase BAZ1B BAZ1B sp|Q9UIG0|BAZ1B_HUMAN Tyrosine-protein kinase BAZ1B OS=Homo sapiens GN=BAZ1B PE=1 SV=2 0.795492 5.89938 0.00609427 89.866 76.203 89.866 1 S KYMTLNPSTKRKNTGSPDRKPSKKSKTDNSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX NT(0.205)GS(0.795)PDRKPSK NT(-5.9)GS(5.9)PDRKPS(-51.49)K 4 3 -0.14242 17280 0 0 21037 0 0 18973 0 0 21057 0 0 11894 0 0 17070 0 0 15222 0 0 19085 0 0 22182 0 0 3826.4 0 0 16357 0 0 19873 0 0 18927 0 0 21556 0 0 12542 0 0 17320 0 0 15525 0 0 19181 0 0 21592 0 0 4044.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 65269000 65269000 0 0 NaN 3887 2158 312 312 2947 3126 3347 3712 3347 3712 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6675 3347 3712 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6675 3347 3712 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6675 Q9UIG0 1342 Q9UIG0 Q9UIG0 Tyrosine-protein kinase BAZ1B BAZ1B sp|Q9UIG0|BAZ1B_HUMAN Tyrosine-protein kinase BAZ1B OS=Homo sapiens GN=BAZ1B PE=1 SV=2 1 72.289 0.0196861 72.289 37.486 72.289 1 S VDELVLQTKRSSRRQSLELQKCEEILHKIVK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX RQS(1)LELQK RQS(72.29)LELQK 3 2 -0.31706 22453 0 0 26955 0 0 21874 0 0 28565 0 0 16590 0 0 22318 0 0 14684 0 0 21827 0 0 29673 0 0 9881.4 0 0 21244 0 0 25472 0 0 21991 0 0 29131 0 0 17134 0 0 22662 0 0 15449 0 0 22211 0 0 28642 0 0 9809.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18959000 18959000 0 0 NaN 3888 2158 1342 1342 3422 3634 3876 4302 3876 4302 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11258 3876 4302 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11258 3876 4302 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11258 Q9UIQ6 91 Q9UIQ6 Q9UIQ6 Leucyl-cystinyl aminopeptidase;Leucyl-cystinyl aminopeptidase, pregnancy serum form LNPEP sp|Q9UIQ6|LCAP_HUMAN Leucyl-cystinyl aminopeptidase OS=Homo sapiens GN=LNPEP PE=1 SV=3 0.984743 18.1024 9.44762E-05 115.29 97.542 115.29 1 S LLGMSFMNRSSGLRNSATGYRQSPDGACSVP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX SSGLRNS(0.985)AT(0.015)GYR S(-54.78)S(-49.81)GLRNS(18.1)AT(-18.1)GY(-73.99)R 7 3 -0.11088 8718.8 0 0 8962.7 0 0 8786.1 0 0 9533.8 0 0 9348.2 0 0 7911.3 0 0 12020 0 0 10020 0 0 9565.3 0 0 1647.8 0 0 8250.5 0 0 8470 0 0 8855.1 0 0 9728.1 0 0 9488.8 0 0 8031.8 0 0 12040 0 0 10018 0 0 9542.2 0 0 1783.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29499000 29499000 0 0 NaN 3889 2159 91 91 4348 4634 4937 5481 4937 5481 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7004 4937 5481 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7004 4937 5481 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7004 Q9UJ41 607 Q9UJ41 Q9UJ41 Rab5 GDP/GTP exchange factor RABGEF1 sp|Q9UJ41|RABX5_HUMAN Rab5 GDP/GTP exchange factor OS=Homo sapiens GN=RABGEF1 PE=1 SV=2 0.971892 15.7148 0.0288605 59.496 23.114 59.496 1 S NLSQEDFDRYMSGQTSPRKQEAESWSPDACL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX YMS(0.002)GQT(0.026)S(0.972)PR Y(-47.73)MS(-26.82)GQT(-15.71)S(15.71)PR 7 2 1.1566 35375 0 0 25199 0 0 36679 0 0 21549 0 0 22065 0 0 38336 0 0 22946 0 0 30322 0 0 25948 0 0 4516.2 0 0 33479 0 0 23784 0 0 36682 0 0 22618 0 0 23270 0 0 37585 0 0 23397 0 0 30862 0 0 25475 0 0 4954.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 38983000 38983000 0 0 NaN 3890 2160 607 607 5401 5753 6140 6827 6140 6827 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8345 6140 6827 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8345 6140 6827 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8345 Q9UJU6 269 Q9UJU6 Q9UJU6 Drebrin-like protein DBNL sp|Q9UJU6|DBNL_HUMAN Drebrin-like protein OS=Homo sapiens GN=DBNL PE=1 SV=1 0.694023 6.33207 3.4242E-07 167.37 143.3 167.37 1 S AVHPREIFKQKERAMSTTSISSPQPGKLRSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX AMS(0.694)T(0.161)T(0.14)S(0.004)ISSPQPGK AMS(6.33)T(-6.33)T(-6.94)S(-22.41)IS(-57.58)S(-61.35)PQPGK 3 2 -2.4368 16630 0 0 7284.4 0 0 15616 0 0 8566.7 0 0 9915.8 0 0 17421 0 0 9839.9 0 0 11978 0 0 7699 0 0 10112 0 0 15733 0 0 6888.7 0 0 15713 0 0 8860 0 0 10396 0 0 17017 0 0 9961.2 0 0 12531 0 0 7687.4 0 0 9798.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7930900 7930900 0 0 NaN 3891 2161 269 269 337 362 391 432 391 432 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12832 391 432 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12832 391 432 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12832 Q9UJU6 275 Q9UJU6 Q9UJU6 Drebrin-like protein DBNL sp|Q9UJU6|DBNL_HUMAN Drebrin-like protein OS=Homo sapiens GN=DBNL PE=1 SV=1 0.892657 9.40536 0.00392631 90.853 78.226 90.853 1 S IFKQKERAMSTTSISSPQPGKLRSPFLQKQL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPXXXXXXXXXX AMSTT(0.001)S(0.004)IS(0.102)S(0.893)PQPGK AMS(-36.87)T(-37.68)T(-31.18)S(-23.53)IS(-9.41)S(9.41)PQPGK 9 3 0.36756 12319 0 0 12187 0 0 13413 0 0 12737 0 0 13072 0 0 15178 0 0 10242 0 0 12983 0 0 12229 0 0 5371.8 0 0 11661 0 0 11516 0 0 13434 0 0 13083 0 0 13248 0 0 15087 0 0 10616 0 0 13270 0 0 11982 0 0 5358.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15045000 15045000 0 0 NaN 3892 2161 275 275 337 362 390 431 390 431 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12143 390 431 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12143 390 431 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12143 Q9UJU6 283 Q9UJU6 Q9UJU6 Drebrin-like protein DBNL sp|Q9UJU6|DBNL_HUMAN Drebrin-like protein OS=Homo sapiens GN=DBNL PE=1 SV=1 1 100.931 0.00107025 100.93 32.38 100.93 1 S MSTTSISSPQPGKLRSPFLQKQLTQPETHFG X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX LRS(1)PFLQK LRS(100.93)PFLQK 3 3 -0.28153 23355 0 0 15181 0 0 23131 0 0 14183 0 0 7876.6 0 0 24708 0 0 8093.2 0 0 15072 0 0 16952 0 0 1230.7 0 0 22099 0 0 14335 0 0 23119 0 0 14793 0 0 8905.3 0 0 24178 0 0 8470.3 0 0 15528 0 0 16351 0 0 1507.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 32156000 32156000 0 0 NaN 3893 2161 283 283 2540 2684 2881 3213 2881 3213 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15814 2881 3213 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15814 2881 3213 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15814 Q9UJX2 588 Q9UJX2 Q9UJX2 Cell division cycle protein 23 homolog CDC23 sp|Q9UJX2|CDC23_HUMAN Cell division cycle protein 23 homolog OS=Homo sapiens GN=CDC23 PE=1 SV=3 0.999044 30.4859 5.71614E-07 147.7 128.6 147.7 1 S LPASLSANNTPTRRVSPLNLSSVTP______ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX RVS(0.999)PLNLS(0.001)SVTP RVS(30.49)PLNLS(-30.49)S(-42.04)VT(-78.87)P 3 2 0.063295 8314.8 0 0 10528 0 0 7769.4 0 0 10318 0 0 8407.3 0 0 9170 0 0 7805.7 0 0 9628.8 0 0 11563 0 0 17306 0 0 7865.9 0 0 9944.7 0 0 7861.4 0 0 10588 0 0 8489.2 0 0 9281.2 0 0 8077.3 0 0 10162 0 0 11250 0 0 16519 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 170570000 170570000 0 0 NaN 3894 2162 588 588 3558;5264 3777;5610 4026 4472 4026 4472 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19091 4026 4472 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19091 4026 4472 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19091 Q9UJX4 195 Q9UJX4 Q9UJX4 Anaphase-promoting complex subunit 5 ANAPC5 sp|Q9UJX4|APC5_HUMAN Anaphase-promoting complex subunit 5 OS=Homo sapiens GN=ANAPC5 PE=1 SV=2 0.999971 47.2489 6.16109E-05 105.17 82.95 105.17 1 S RDEGERKMEKEELDVSVREEEVSCSGPLSQK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP EELDVS(1)VREEEVSCSGPLSQK EELDVS(47.25)VREEEVS(-50.11)CS(-47.25)GPLS(-80.53)QK 6 3 -0.1428 2835.1 0 0 4233.2 0 0 4020.6 0 0 4484.3 0 0 3380.6 0 0 4783.4 0 0 4494.2 0 0 5140 0 0 4768.8 0 0 38371 0 0 2687.2 0 0 4000.4 0 0 3974.6 0 0 4593.9 0 0 3484.4 0 0 4858 0 0 4528.8 0 0 6298.2 0 0 4693.8 0 0 36250 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10491000 10491000 0 0 NaN 3895 2163 195 195 928 982 1066 1177 1066 1177 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16880 1066 1177 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16880 1066 1177 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16880 Q9UJX6 534 Q9UJX6 Q9UJX6 Anaphase-promoting complex subunit 2 ANAPC2 sp|Q9UJX6|ANC2_HUMAN Anaphase-promoting complex subunit 2 OS=Homo sapiens GN=ANAPC2 PE=1 SV=1 0.998877 29.4918 2.97403E-10 184.87 141.32 184.87 1 S YRSLLADRLLHQFSFSPEREIRNVELLKLRF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX LLHQFS(0.001)FS(0.999)PER LLHQFS(-29.49)FS(29.49)PER 8 3 -0.17536 3001.3 0 0 4838.2 0 0 2441.1 0 0 3914 0 0 2928.4 0 0 3195.6 0 0 2719.2 0 0 3948.8 0 0 5210.3 0 0 3291.9 0 0 2837.9 0 0 4565.2 0 0 2495.8 0 0 4063.6 0 0 2942.4 0 0 3250.9 0 0 2846.2 0 0 4031 0 0 5035.4 0 0 3191.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10584000 10584000 0 0 NaN 3896 2164 534 534 2436 2574 2768 3091 2768 3091 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19463 2768 3091 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19463 2768 3091 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19463 Q9UJX6 218 Q9UJX6 Q9UJX6 Anaphase-promoting complex subunit 2 ANAPC2 sp|Q9UJX6|ANC2_HUMAN Anaphase-promoting complex subunit 2 OS=Homo sapiens GN=ANAPC2 PE=1 SV=1 1 69.6473 0.00231946 95.365 77.001 95.365 1 S LDSRYARRRYYRLLQSPLCAGCSSDKQQCWC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX LLQS(1)PLCAGCSSDK LLQS(69.65)PLCAGCS(-69.65)S(-76.63)DK 4 3 -0.54115 5543.8 0 0 13100 0 0 5622.7 0 0 12371 0 0 8351.6 0 0 6018.9 0 0 7252.9 0 0 9070.7 0 0 11798 0 0 11554 0 0 5246.2 0 0 12371 0 0 5688.5 0 0 12645 0 0 8302.9 0 0 6376.6 0 0 7560.1 0 0 9328.4 0 0 11448 0 0 11090 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22832000 22832000 0 0 NaN 3897 2164 218 218 2455 2593 2787 3114 2787 3114 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17524 2787 3114 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17524 2787 3114 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17524 Q9UK58 352 Q9UK58 Q9UK58 Cyclin-L1 CCNL1 sp|Q9UK58|CCNL1_HUMAN Cyclin-L1 OS=Homo sapiens GN=CCNL1 PE=1 SV=1 0.999877 39.0843 4.65073E-05 127.22 97.877 127.22 1 S ASKPSSPREVKAEEKSPISINVKTVKKEPED X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX AEEKS(1)PISINVK AEEKS(39.08)PIS(-39.08)INVK 5 3 0.018088 8972.5 0 0 10990 0 0 10682 0 0 10517 0 0 9060.4 0 0 10264 0 0 10091 0 0 10021 0 0 11062 0 0 6575.2 0 0 8496.7 0 0 10379 0 0 10640 0 0 10823 0 0 9305.8 0 0 10309 0 0 10249 0 0 10259 0 0 10874 0 0 6423.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 138080000 138080000 0 0 NaN 3898 2166 352 352 135 141 152 171 152 171 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15241 152 171 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15241 152 171 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15241 Q9UK58 335 Q9UK58 Q9UK58 Cyclin-L1 CCNL1 sp|Q9UK58|CCNL1_HUMAN Cyclin-L1 OS=Homo sapiens GN=CCNL1 PE=1 SV=1 0.948583 10.882 6.95769E-12 187.76 165.64 187.76 2 S LNPDGTPALSTLGGFSPASKPSSPREVKAEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPXXXXXX GLNPDGTPALSTLGGFS(0.949)PAS(0.378)KPS(0.445)S(0.228)PR GLNPDGT(-113.12)PALS(-56.22)T(-38.09)LGGFS(10.88)PAS(-0.99)KPS(0.99)S(-2.9)PR 17 4 -0.25679 0 4008.1 0 0 5480.6 0 0 3878.8 0 0 5325.2 0 0 3665.2 0 0 3986.7 0 0 4912.5 0 0 4519 0 0 6094.1 0 0 13478 0 0 3792.2 0 0 5176.4 0 0 3912.9 0 0 5455.7 0 0 3750.8 0 0 4087.9 0 0 4973 0 0 4918.4 0 0 5962.9 0 0 12796 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 32651000 0 32651000 0 NaN 3899 2166 335 335 1505 1583;1584 1713 1895 1713 1895 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20289 1713 1895 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20289 1713 1895 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20289 Q9UK58 341 Q9UK58 Q9UK58 Cyclin-L1 CCNL1 sp|Q9UK58|CCNL1_HUMAN Cyclin-L1 OS=Homo sapiens GN=CCNL1 PE=1 SV=1 0.44505 0.991608 6.95769E-12 187.76 165.64 187.76 S PALSTLGGFSPASKPSSPREVKAEEKSPISI X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX GLNPDGTPALSTLGGFS(0.949)PAS(0.378)KPS(0.445)S(0.228)PR GLNPDGT(-113.12)PALS(-56.22)T(-38.09)LGGFS(10.88)PAS(-0.99)KPS(0.99)S(-2.9)PR 23 4 -0.25679 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3900 2166 341 341 1505 1583;1584 1713 1895 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20289 1713 1895 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20289 1713 1895 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20289 Q9UK61 927 Q9UK61 Q9UK61 Protein FAM208A FAM208A sp|Q9UK61|F208A_HUMAN Protein FAM208A OS=Homo sapiens GN=FAM208A PE=1 SV=3 1 130.006 4.21649E-05 130.01 74.922 130.01 1 S EIHWKLIPITGGNARSPEDQLGKHGEKQTPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPXXXXXXXX S(1)PEDQLGK S(130.01)PEDQLGK 1 2 0.34292 60026 0 0 31943 0 0 60184 0 0 33506 0 0 34080 0 0 57883 0 0 36376 0 0 45223 0 0 31824 0 0 17441 0 0 56800 0 0 30185 0 0 60278 0 0 34699 0 0 36154 0 0 56805 0 0 36793 0 0 46378 0 0 31594 0 0 17470 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 48981000 48981000 0 0 NaN 3901 2167 927 927 2409;4088 2546;4359 2739;4649 3059;5162 4649 5162 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11533 4649 5162 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11533 2739 3059 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18632 Q9UK61 971 Q9UK61 Q9UK61 Protein FAM208A FAM208A sp|Q9UK61|F208A_HUMAN Protein FAM208A OS=Homo sapiens GN=FAM208A PE=1 SV=3 0.749485 4.76531 6.78145E-05 101.92 80.717 101.92 1 S QEAFPNDPRVINRQRSSDYQFPSSPFTDTLK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP QRS(0.749)S(0.25)DYQFPSSPFTDTLK QRS(4.77)S(-4.77)DY(-35.99)QFPS(-36.81)S(-56.41)PFT(-76.41)DT(-83.84)LK 3 3 -1.6394 5738.9 0 0 5827 0 0 6862.4 0 0 4706.4 0 0 6543 0 0 6943.5 0 0 8628.1 0 0 7168.8 0 0 4863.6 0 0 16516 0 0 5434.7 0 0 5498.2 0 0 6845.5 0 0 4936.7 0 0 6684.7 0 0 6893.9 0 0 8579.4 0 0 7679.8 0 0 4958.6 0 0 15718 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13711000 13711000 0 0 NaN 3902 2167 971 971 3130;4333 3321;4619 3551 3936 3551 3936 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20104 3551 3936 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20104 3551 3936 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20104 Q9UK61 972 Q9UK61 Q9UK61 Protein FAM208A FAM208A sp|Q9UK61|F208A_HUMAN Protein FAM208A OS=Homo sapiens GN=FAM208A PE=1 SV=3 0.457226 0 0.0100125 74.141 54.886 74.141 S EAFPNDPRVINRQRSSDYQFPSSPFTDTLKG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.457)S(0.457)DY(0.085)QFPS(0.001)SPFTDTLK S(0)S(0)DY(-7.31)QFPS(-29.5)S(-34.32)PFT(-47.4)DT(-56.13)LK 2 3 0.29151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3903 2167 972 972 3130;4333 3321;4619 4922 5466 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22634 4922 5466 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22634 4922 5466 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22634 Q9UK61 979 Q9UK61 Q9UK61 Protein FAM208A FAM208A sp|Q9UK61|F208A_HUMAN Protein FAM208A OS=Homo sapiens GN=FAM208A PE=1 SV=3 0.986012 20.6644 5.19656E-05 124.08 104.75 124.08 1 S RVINRQRSSDYQFPSSPFTDTLKGTTEDDVL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPXXXXXXXX SSDYQFPS(0.008)S(0.986)PFT(0.005)DTLK S(-101.7)S(-101.7)DY(-96.93)QFPS(-20.66)S(20.66)PFT(-22.69)DT(-36.42)LK 9 3 0.2975 7608.6 0 0 7530.5 0 0 6905.8 0 0 6949.1 0 0 4536.1 0 0 8939.5 0 0 4834.2 0 0 7967.9 0 0 8433.2 0 0 28475 0 0 7197.1 0 0 7110.5 0 0 6965.7 0 0 7202.5 0 0 4750.8 0 0 8913.1 0 0 5005.1 0 0 8888 0 0 8168.4 0 0 26997 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10222000 10222000 0 0 NaN 3904 2167 979 979 3130;4333 3321;4619 4921 5465 4921 5465 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21851 4921 5465 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21851 4921 5465 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21851 Q9UK76 87 Q9UK76 Q9UK76 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed HN1 sp|Q9UK76|HN1_HUMAN Hematological and neurological expressed 1 protein OS=Homo sapiens GN=HN1 PE=1 SV=3 0.999043 30.1891 5.60958E-16 233.56 190.11 233.56 1 S GGREDLESSGLQRRNSSEASSGDFLDLKGEG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX RNS(0.999)S(0.001)EASSGDFLDLK RNS(30.19)S(-30.19)EAS(-72.54)S(-98.71)GDFLDLK 3 3 -0.25771 54712 0 0 69256 0 0 60797 0 0 71082 0 0 54683 0 0 65838 0 0 53408 0 0 67576 0 0 79501 0 0 34293 0 0 51794 0 0 65434 0 0 60792 0 0 72789 0 0 55860 0 0 66313 0 0 55140 0 0 68750 0 0 77337 0 0 33855 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 830720000 830720000 0 0 NaN 3905 2168 87 87 2936;3368 3114;3575 3334;3814 3696;4234;4235;4236 3814 4234 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17537 3814 4234 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17537 3814 4234 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17537 Q9UKA4 456 Q9UKA4 Q9UKA4 A-kinase anchor protein 11 AKAP11 sp|Q9UKA4|AKA11_HUMAN A-kinase anchor protein 11 OS=Homo sapiens GN=AKAP11 PE=1 SV=1 0.990594 23.2397 5.44509E-12 185.68 165.44 185.68 1 S REDSGLFSPIRSSAFSPLGGCTPAECFCQTD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP S(0.005)S(0.005)AFS(0.991)PLGGCTPAECFCQTDIGGDR S(-23.24)S(-23.24)AFS(23.24)PLGGCT(-50)PAECFCQT(-141.79)DIGGDR 5 3 -0.34759 2786.3 0 0 2319 0 0 3216.9 0 0 2259.7 0 0 2686.9 0 0 3129.2 0 0 2935.6 0 0 3311.7 0 0 2368.8 0 0 20275 0 0 2638.2 0 0 2190.4 0 0 3208.4 0 0 2337.8 0 0 2761 0 0 3138.2 0 0 2960.8 0 0 3925.8 0 0 2361.3 0 0 19168 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8440000 8440000 0 0 NaN 3906 2169 456 456 4324 4610 4912 5456 4912 5456 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20067 4912 5456 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20067 4912 5456 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20067 Q9UKA4 1242 Q9UKA4 Q9UKA4 A-kinase anchor protein 11 AKAP11 sp|Q9UKA4|AKA11_HUMAN A-kinase anchor protein 11 OS=Homo sapiens GN=AKAP11 PE=1 SV=1 0.735001 6.75544 1.26709E-07 170.16 146.93 170.16 1 S KVKNPCLNVQSQRSVSPTFLNPSDENLKTLC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX S(0.11)VS(0.735)PT(0.155)FLNPSDENLK S(-8.25)VS(6.76)PT(-6.76)FLNPS(-121.49)DENLK 3 3 0.2037 9769.3 0 0 7086.9 0 0 10905 0 0 8682.3 0 0 9182.7 0 0 10632 0 0 7700 0 0 8790.4 0 0 7679.5 0 0 8846 0 0 9248.5 0 0 6703.8 0 0 10892 0 0 8848.7 0 0 9399.3 0 0 10564 0 0 7908.5 0 0 9155.3 0 0 7578.2 0 0 8533 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 83214000 83214000 0 0 NaN 3907 2169 1242 1242 4572 4877 5195 5770 5195 5770 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19581 5195 5770 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19581 5195 5770 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19581 Q9UKE5 764 Q9UKE5 Q9UKE5 TRAF2 and NCK-interacting protein kinase TNIK sp|Q9UKE5|TNIK_HUMAN TRAF2 and NCK-interacting protein kinase OS=Homo sapiens GN=TNIK PE=1 SV=1 0.971639 15.2555 9.52512E-05 106.99 85.86 106.99 2 S GSQAGSSERTRVRANSKSEGSPVLPHEPAKV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX ANS(0.972)KS(0.049)EGS(0.98)PVLPHEPAK ANS(15.26)KS(-15.26)EGS(16.68)PVLPHEPAK 3 3 2.8083 0 8544.4 0 0 26618 0 0 7691.4 0 0 25482 0 0 33160 0 0 8385.8 0 0 34915 0 0 22306 0 0 24364 0 0 12691 0 0 8082 0 0 25139 0 0 8109 0 0 25958 0 0 32162 0 0 9366.9 0 0 35168 0 0 22217 0 0 24487 0 0 12466 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 32925000 0 32925000 0 NaN 3908 2170 764 764 345 371 402 443 402 443 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12190 402 443 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12190 402 443 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12190 Q9UKE5 769 Q9UKE5 Q9UKE5 TRAF2 and NCK-interacting protein kinase TNIK sp|Q9UKE5|TNIK_HUMAN TRAF2 and NCK-interacting protein kinase OS=Homo sapiens GN=TNIK PE=1 SV=1 0.979572 16.6804 3.99389E-05 130.06 99.851 106.99 1;2 S SSERTRVRANSKSEGSPVLPHEPAKVKPEES X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPXXXXXX ANS(0.972)KS(0.049)EGS(0.98)PVLPHEPAK ANS(15.26)KS(-15.26)EGS(16.68)PVLPHEPAK 8 3 2.8083 11366 8544.4 0 51599 26618 0 7843.6 7691.4 0 47543 25482 0 44275 33160 0 12988 8385.8 0 34106 34915 0 31963 22306 0 47904 24364 0 4244.1 12691 0 10742 8082 0 48721 25139 0 8527.4 8109 0 48508 25958 0 42649 32162 0 14806 9366.9 0 35583 35168 0 31454 22217 0 46681 24487 0 4736.1 12466 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 139530000 106600000 32925000 0 NaN 3909 2170 769 769 345;3688 371;3923 402;4183 443;4649 402 443 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12190 4183 4649 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11884 4183 4649 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11884 Q9UKE5 707 Q9UKE5 Q9UKE5 TRAF2 and NCK-interacting protein kinase TNIK sp|Q9UKE5|TNIK_HUMAN TRAF2 and NCK-interacting protein kinase OS=Homo sapiens GN=TNIK PE=1 SV=1 0.999994 51.9823 0.000116026 115.42 73.388 115.42 1 S GSALGPRLGSQPIRASNPDLRRTEPILESPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPXXXXXXXXXX LGSQPIRAS(1)NPDLR LGS(-51.98)QPIRAS(51.98)NPDLR 9 3 0.01736 9219.9 0 0 33193 0 0 10945 0 0 31317 0 0 30108 0 0 10716 0 0 26407 0 0 28267 0 0 36462 0 0 3653.6 0 0 8730.8 0 0 31346 0 0 11149 0 0 31939 0 0 29379 0 0 11888 0 0 27333 0 0 27784 0 0 35551 0 0 4094.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 97423000 97423000 0 0 NaN 3910 2170 707 707 2388 2525 2718 3036 2718 3036 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12700 2718 3036 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12700 2718 3036 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12700 Q9UKE5 680 Q9UKE5 Q9UKE5 TRAF2 and NCK-interacting protein kinase TNIK sp|Q9UKE5|TNIK_HUMAN TRAF2 and NCK-interacting protein kinase OS=Homo sapiens GN=TNIK PE=1 SV=1 0.997261 26.0852 1.51982E-09 187.35 147.44 187.35 1 S EEDIPPKVPQRTTSISPALARKNSPGNGSAL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX TTS(0.002)IS(0.997)PALAR T(-37.13)T(-40.45)S(-26.09)IS(26.09)PALAR 5 2 0.5968 42212 0 0 135520 0 0 37796 0 0 136420 0 0 133150 0 0 36513 0 0 127520 0 0 104630 0 0 142500 0 0 9307.5 0 0 39927 0 0 128030 0 0 39469 0 0 138410 0 0 129430 0 0 41930 0 0 130490 0 0 102590 0 0 139970 0 0 11186 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 211020000 211020000 0 0 NaN 3911 2170 680 680 4985 5314 5662 6291 5662 6291 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12412 5662 6291 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12412 5662 6291 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12412 Q9UKG1 401 Q9UKG1 Q9UKG1 DCC-interacting protein 13-alpha APPL1 sp|Q9UKG1|DP13A_HUMAN DCC-interacting protein 13-alpha OS=Homo sapiens GN=APPL1 PE=1 SV=1 0.951365 13.2404 2.20135E-05 126.97 97.883 126.97 1 S TAARVNQSALEAVTPSPSFQQRHESLRPAAG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPXXXXXXXXX VNQSALEAVT(0.004)PS(0.951)PS(0.045)FQQR VNQS(-93.19)ALEAVT(-24.32)PS(13.24)PS(-13.24)FQQR 12 3 -0.045773 6521.4 0 0 6037.8 0 0 5636.8 0 0 5187.7 0 0 6613.9 0 0 6591.5 0 0 7174.3 0 0 6476.8 0 0 6668.8 0 0 11119 0 0 6167.6 0 0 5698.8 0 0 5739.8 0 0 5401 0 0 6661.5 0 0 6563.8 0 0 7262 0 0 6836.2 0 0 6601.5 0 0 10620 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10467000 10467000 0 0 NaN 3912 2171 401 401 5192 5535 5899 6555 5899 6555 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16836 5899 6555 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16836 5899 6555 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16836 Q9UKI8 159 Q9UKI8 Q9UKI8 Serine/threonine-protein kinase tousled-like 1 TLK1 sp|Q9UKI8|TLK1_HUMAN Serine/threonine-protein kinase tousled-like 1 OS=Homo sapiens GN=TLK1 PE=1 SV=2 0.879704 8.64084 9.83351E-11 183.15 163.57 183.15 1 S HKISDYFEYQGGNGSSPVRGIPPAIRSPQNS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPXXXXXXXXXXXX ISDYFEYQGGNGS(0.12)S(0.88)PVR IS(-144.89)DY(-154.19)FEY(-132.64)QGGNGS(-8.64)S(8.64)PVR 14 3 0.64693 5036.4 0 0 6156.5 0 0 5706.9 0 0 5399.7 0 0 5045.4 0 0 5511.7 0 0 5785 0 0 5832.9 0 0 7013.1 0 0 10930 0 0 4768.2 0 0 5811.5 0 0 5701.2 0 0 5592.2 0 0 5170.8 0 0 5544.3 0 0 5886.7 0 0 6167.7 0 0 6867.7 0 0 10427 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 38824000 38824000 0 0 NaN 3913 2172 159 159 1937 2045 2207 2467 2207 2467 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18899 2207 2467 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18899 2207 2467 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18899 Q9UKI8 134 Q9UKI8 Q9UKI8 Serine/threonine-protein kinase tousled-like 1 TLK1 sp|Q9UKI8|TLK1_HUMAN Serine/threonine-protein kinase tousled-like 1 OS=Homo sapiens GN=TLK1 PE=1 SV=2 0.97896 16.6772 9.1947E-11 176.21 126.06 176.21 1 S SSRGRKRKAENQNESSQGKSIGGRGHKISDY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPXXXXXXXXXXXX KAENQNES(0.021)S(0.979)QGK KAENQNES(-16.68)S(16.68)QGK 9 3 0.24992 12491 0 0 31068 0 0 12738 0 0 33005 0 0 16328 0 0 11940 0 0 17110 0 0 21764 0 0 33086 0 0 1717.2 0 0 11821 0 0 29360 0 0 12858 0 0 33432 0 0 16384 0 0 13034 0 0 17816 0 0 21502 0 0 31969 0 0 2120.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 63949000 63949000 0 0 NaN 3914 2172 134 134 2000 2115 2279 2545 2279 2545 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6270 2279 2545 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6270 2279 2545 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6270 Q9UKJ3 740 Q9UKJ3 Q9UKJ3 G patch domain-containing protein 8 GPATCH8 sp|Q9UKJ3|GPTC8_HUMAN G patch domain-containing protein 8 OS=Homo sapiens GN=GPATCH8 PE=1 SV=2 0.841253 7.24221 3.80913E-05 127.9 112.14 127.9 1 S ADSERGPKPEPPGSGSPAPPRRRRRAQDDSQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPXXXXXXXXXX GPKPEPPGS(0.159)GS(0.841)PAPPR GPKPEPPGS(-7.24)GS(7.24)PAPPR 11 3 0.029668 26439 0 0 26688 0 0 28281 0 0 25821 0 0 27807 0 0 27642 0 0 28374 0 0 23569 0 0 29114 0 0 4484.8 0 0 25025 0 0 25206 0 0 28367 0 0 26594 0 0 28256 0 0 27583 0 0 28876 0 0 23934 0 0 28696 0 0 4768.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 73483000 73483000 0 0 NaN 3915 2173 740 740 1547 1629 1758 1951 1758 1951 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9117 1758 1951 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9117 1758 1951 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9117 Q9UKJ3 1081 Q9UKJ3 Q9UKJ3 G patch domain-containing protein 8 GPATCH8 sp|Q9UKJ3|GPTC8_HUMAN G patch domain-containing protein 8 OS=Homo sapiens GN=GPATCH8 PE=1 SV=2 0.999984 49.1231 7.22643E-11 190.91 169.78 190.91 1 S QNSNIGTGRGSEGDCSPEDKNSVTAKLLLEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPXXXXX GSEGDCS(1)PEDKNSVTAK GS(-49.12)EGDCS(49.12)PEDKNS(-53.79)VT(-78.47)AK 7 3 0.20771 20895 0 0 20939 0 0 20203 0 0 21726 0 0 14915 0 0 22391 0 0 16753 0 0 18002 0 0 21987 0 0 9786.7 0 0 19770 0 0 19785 0 0 20322 0 0 22270 0 0 15479 0 0 22378 0 0 17108 0 0 18523 0 0 21473 0 0 9632 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16098000 16098000 0 0 NaN 3916 2173 1081 1081 1600 1686 1822 2025 1822 2025 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9572 1822 2025 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9572 1822 2025 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9572 Q9UKJ3 438 Q9UKJ3 Q9UKJ3 G patch domain-containing protein 8 GPATCH8 sp|Q9UKJ3|GPTC8_HUMAN G patch domain-containing protein 8 OS=Homo sapiens GN=GPATCH8 PE=1 SV=2 0.5 0 0.0437256 52.79 27.935 52.79 1 S DNTTHPKNAPESKKGSSPKPKSCIKAAASQG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX KGS(0.5)S(0.5)PKPK KGS(0)S(0)PKPK 3 3 0.63272 13214 0 0 13395 0 0 13741 0 0 12900 0 0 14392 0 0 17196 0 0 15376 0 0 15590 0 0 13428 0 0 2451.1 0 0 12506 0 0 12651 0 0 13816 0 0 13344 0 0 14579 0 0 17029 0 0 15551 0 0 15774 0 0 13332 0 0 2668.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11555000 11555000 0 0 NaN 3917 2173 438 438 2080 2200 2369 2639 2369 2639 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7309 2369 2639 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7309 2369 2639 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7309 Q9UKJ3 439 Q9UKJ3 Q9UKJ3 G patch domain-containing protein 8 GPATCH8 sp|Q9UKJ3|GPTC8_HUMAN G patch domain-containing protein 8 OS=Homo sapiens GN=GPATCH8 PE=1 SV=2 0.5 0 0.0437256 52.79 27.935 52.79 1 S NTTHPKNAPESKKGSSPKPKSCIKAAASQGA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KGS(0.5)S(0.5)PKPK KGS(0)S(0)PKPK 4 3 0.63272 13214 0 0 13395 0 0 13741 0 0 12900 0 0 14392 0 0 17196 0 0 15376 0 0 15590 0 0 13428 0 0 2451.1 0 0 12506 0 0 12651 0 0 13816 0 0 13344 0 0 14579 0 0 17029 0 0 15551 0 0 15774 0 0 13332 0 0 2668.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11555000 11555000 0 0 NaN 3918 2173 439 439 2080 2200 2369 2639 2369 2639 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7309 2369 2639 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7309 2369 2639 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7309 Q9UKJ3 653 Q9UKJ3 Q9UKJ3 G patch domain-containing protein 8 GPATCH8 sp|Q9UKJ3|GPTC8_HUMAN G patch domain-containing protein 8 OS=Homo sapiens GN=GPATCH8 PE=1 SV=2 0.998231 28.5202 0.000100029 110.4 95.012 110.4 1 S ACSGLNKQEPGGSHGSETEDTGRSLPSKKER X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPXXXXXXXX QEPGGSHGS(0.998)ET(0.001)EDTGR QEPGGS(-34.39)HGS(28.52)ET(-28.52)EDT(-57.05)GR 9 3 -0.080126 1110.5 0 0 2031 0 0 1615 0 0 2021.9 0 0 1616.8 0 0 1290.5 0 0 1150 0 0 1701.6 0 0 1891.2 0 0 1449 0 0 1052.8 0 0 1918.6 0 0 1596.3 0 0 2064.8 0 0 1634.8 0 0 1334 0 0 1213.3 0 0 1734.6 0 0 1834.6 0 0 1403.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 3251700 3251700 0 0 NaN 3919 2173 653 653 3019 3200 3423 3796 3423 3796 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5223 3423 3796 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5223 3423 3796 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5223 Q9UKJ3 758 Q9UKJ3 Q9UKJ3 G patch domain-containing protein 8 GPATCH8 sp|Q9UKJ3|GPTC8_HUMAN G patch domain-containing protein 8 OS=Homo sapiens GN=GPATCH8 PE=1 SV=2 1 77.8656 9.64282E-07 150.49 101.14 150.49 1 S PPRRRRRAQDDSQRRSLPAEEGSSGKKDEGG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPXXXXX S(1)LPAEEGSSGK S(77.87)LPAEEGS(-77.87)S(-91.36)GK 1 2 0.6392 23099 0 0 25300 0 0 21357 0 0 23244 0 0 21053 0 0 19786 0 0 24046 0 0 25068 0 0 24106 0 0 39562 0 0 21851 0 0 23889 0 0 21608 0 0 23936 0 0 21425 0 0 20128 0 0 24335 0 0 26133 0 0 23783 0 0 37833 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11815000 11815000 0 0 NaN 3920 2173 758 758 3957 4216 4499 5001 4499 5001 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10794 4499 5001 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10794 4499 5001 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10794 Q9UKK9 3 Q9UKK9 Q9UKK9 ADP-sugar pyrophosphatase NUDT5 sp|Q9UKK9|NUDT5_HUMAN ADP-sugar pyrophosphatase OS=Homo sapiens GN=NUDT5 PE=1 SV=1 1 84.9687 3.72045E-11 174.41 156.67 167.67 1 S _____________MESQEPTESSQNGKQYII X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX MES(1)QEPTESSQNGK MES(84.97)QEPT(-84.97)ES(-108.45)S(-122.33)QNGK 3 2 -3.5929 7584.1 0 0 8135.9 0 0 9232.5 0 0 7664.3 0 0 24114 0 0 8447.8 0 0 24228 0 0 14082 0 0 9088.6 0 0 5225.6 0 0 7182.7 0 0 7683 0 0 9384.2 0 0 7910.8 0 0 23579 0 0 8513.2 0 0 24242 0 0 14064 0 0 9609.9 0 0 5246.4 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 39991000 39991000 0 0 NaN 3921 2174 3 3 2686 2842;2843 3049;3050 3395;3396 3049 3395 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6888 3050 3396 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9286 3050 3396 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9286 Q9UKL0 457 Q9UKL0 Q9UKL0 REST corepressor 1 RCOR1 sp|Q9UKL0|RCOR1_HUMAN REST corepressor 1 OS=Homo sapiens GN=RCOR1 PE=1 SV=1 0.999997 55.8284 0.00164861 113.1 60.229 113.1 1 S GKEETNGPSNQKPVKSPDNSIKMPEEEDEAP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX S(1)PDNSIK S(55.83)PDNS(-55.83)IK 1 2 0.75593 28423 0 0 32649 0 0 32761 0 0 32132 0 0 26023 0 0 29781 0 0 27326 0 0 28259 0 0 33777 0 0 6610.2 0 0 26912 0 0 30839 0 0 32659 0 0 32986 0 0 26831 0 0 29949 0 0 27930 0 0 28604 0 0 33054 0 0 6878.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24681000 24681000 0 0 NaN 3922 2175 457 457 4082 4352 4642 5155 4642 5155 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9382 4642 5155 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9382 4642 5155 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9382 Q9UKL0 124 Q9UKL0 Q9UKL0 REST corepressor 1 RCOR1 sp|Q9UKL0|RCOR1_HUMAN REST corepressor 1 OS=Homo sapiens GN=RCOR1 PE=1 SV=1 0.999999 61.0507 1.0486E-08 171.02 132.35 171.02 1 S QAVVPDFDPAKLARRSQERDNLGMLVWSPNQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(1)QERDNLGMLVWSPNQNLSEAK S(61.05)QERDNLGMLVWS(-61.05)PNQNLS(-136.01)EAK 1 3 1.3694 12246 0 0 11005 0 0 12254 0 0 10361 0 0 9411.9 0 0 12555 0 0 10348 0 0 14723 0 0 13471 0 0 79585 0 0 11588 0 0 10393 0 0 12305 0 0 10713 0 0 9735.2 0 0 12663 0 0 10574 0 0 17083 0 0 13160 0 0 75279 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 11473000 11473000 0 0 NaN 3923 2175 124 124 4227 4505 4801 5327;5328 4801 5328 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21173 4801 5328 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21173 4801 5328 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21173 Q9UKL3 567 Q9UKL3 Q9UKL3 CASP8-associated protein 2 CASP8AP2 sp|Q9UKL3|C8AP2_HUMAN CASP8-associated protein 2 OS=Homo sapiens GN=CASP8AP2 PE=1 SV=1 0.998713 28.8994 0.000123462 124.09 99.751 124.09 1 S KDLKLSFMKKLNLTLSPAKKQPVSQDNQHKI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX KLNLT(0.001)LS(0.999)PAK KLNLT(-28.9)LS(28.9)PAK 7 3 0.027387 38729 0 0 25527 0 0 37481 0 0 24127 0 0 14235 0 0 37258 0 0 15208 0 0 26384 0 0 28581 0 0 23968 0 0 36643 0 0 24107 0 0 37531 0 0 25069 0 0 15845 0 0 36668 0 0 15800 0 0 27609 0 0 27634 0 0 23179 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 34026000 34026000 0 0 NaN 3924 2176 567 567 2119;2479 2240;2618 2413;2812 2689;3139 2413 2689 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17659 2413 2689 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17659 2413 2689 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17659 Q9UKM9 106 Q9UKM9 Q9UKM9 RNA-binding protein Raly RALY sp|Q9UKM9|RALY_HUMAN RNA-binding protein Raly OS=Homo sapiens GN=RALY PE=1 SV=1 0.969272 14.9891 3.92889E-32 323.02 296.87 323.02 1 S GEPKPDRPKGLKRAASAIYSGYIFDYDYYRD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX AAS(0.969)AIYS(0.031)GYIFDYDYYR AAS(14.99)AIY(-95.53)S(-14.99)GY(-135.16)IFDY(-124.39)DY(-127.66)Y(-150.14)R 3 2 -0.57034 10512 0 0 12910 0 0 12663 0 0 11841 0 0 16049 0 0 14593 0 0 21937 0 0 17581 0 0 16090 0 0 290990 0 0 9955.5 0 0 12190 0 0 12680 0 0 12267 0 0 16164 0 0 15090 0 0 21887 0 0 26287 0 0 16124 0 0 274410 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 72140000 72140000 0 0 NaN 3925 2177 106 106 61 65 70 82 70 82 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23591 70 82 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23591 70 82 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23591 Q9UKM9 135 Q9UKM9 Q9UKM9 RNA-binding protein Raly RALY sp|Q9UKM9|RALY_HUMAN RNA-binding protein Raly OS=Homo sapiens GN=RALY PE=1 SV=1 1 63.8162 0.00232906 94.507 70.758 63.816 1 S RDDFYDRLFDYRGRLSPVPVPRAVPVKRPRV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX LS(1)PVPVPR LS(63.82)PVPVPR 2 2 0.72612 22973 0 0 28281 0 0 22282 0 0 27642 0 0 28729 0 0 21842 0 0 30795 0 0 27631 0 0 28769 0 0 8674.2 0 0 21736 0 0 26712 0 0 22560 0 0 28328 0 0 28801 0 0 22241 0 0 31192 0 0 27753 0 0 28472 0 0 8807.3 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 1820800000 1820800000 0 0 NaN 3926 2177 135 135 1588;2580 1674;2724 1810;2922 2011;3256 2922 3256 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15635 1810 2011 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12066 1810 2011 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12066 Q9UKT5 12 Q9UKT5 Q9UKT5 F-box only protein 4 FBXO4 sp|Q9UKT5|FBX4_HUMAN F-box only protein 4 OS=Homo sapiens GN=FBXO4 PE=1 SV=2 0.983088 18.4237 4.09054E-07 164.7 143.4 164.7 1 S ____MAGSEPRSGTNSPPPPFSDWGRLEAAI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPXXXXX S(0.003)GT(0.014)NS(0.983)PPPPFSDWGR S(-25.49)GT(-18.42)NS(18.42)PPPPFS(-61.4)DWGR 5 2 -0.24082 7269.2 0 0 24106 0 0 8012.4 0 0 24802 0 0 18429 0 0 7657.9 0 0 20611 0 0 18519 0 0 26414 0 0 38992 0 0 6881.3 0 0 22776 0 0 8157 0 0 25148 0 0 18123 0 0 8650.7 0 0 21034 0 0 19330 0 0 25816 0 0 37144 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 24932000 24932000 0 0 NaN 3927 2178 12 12 3825 4077 4350 4833;4834 4350 4834 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18763 4350 4834 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18763 4350 4834 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18763 Q9UKV0 451 Q9UKV0 Q9UKV0 Histone deacetylase 9 HDAC9 sp|Q9UKV0|HDAC9_HUMAN Histone deacetylase 9 OS=Homo sapiens GN=HDAC9 PE=1 SV=2 0.863955 8.02808 3.03391E-25 280.03 258.66 280.03 1 S GTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP T(0.136)QS(0.864)APLPQSTLAQLVIQQQHQQFLEK T(-8.03)QS(8.03)APLPQS(-81.64)T(-97.64)LAQLVIQQQHQQFLEK 3 4 0.14066 54617 0 0 5195.9 0 0 53973 0 0 1900.7 0 0 8464.2 0 0 57481 0 0 8583.1 0 0 31089 0 0 3208.6 0 0 34100 0 0 51679 0 0 4889.6 0 0 53828 0 0 3045.8 0 0 11273 0 0 54869 0 0 8584 0 0 33235 0 0 3393.8 0 0 32829 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 130350000 130350000 0 0 NaN 3928 2179 451 451 4882 5207 5547 6165 5547 6165 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23110 5547 6165 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23110 5547 6165 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23110 Q9UKV3 819 Q9UKV3 Q9UKV3 Apoptotic chromatin condensation inducer in the nucleus ACIN1 sp|Q9UKV3|ACINU_HUMAN Apoptotic chromatin condensation inducer in the nucleus OS=Homo sapiens GN=ACIN1 PE=1 SV=2 0.994527 23.592 0.0497862 49.31 26.431 49.31 1 S GSVEDEEKKESSLPKSFKRKISVVSATKGVP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX ES(0.001)S(0.004)LPKS(0.995)FKR ES(-29.47)S(-23.59)LPKS(23.59)FKR 7 3 -0.037005 13634 0 0 14157 0 0 15188 0 0 15639 0 0 15855 0 0 13404 0 0 15235 0 0 15100 0 0 13132 0 0 4731.6 0 0 12907 0 0 13382 0 0 15211 0 0 15931 0 0 16040 0 0 13565 0 0 15480 0 0 15223 0 0 13047 0 0 4804.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14103000 14103000 0 0 NaN 3929 2180 819 819 1168 1229 1326 1465 1326 1465 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12081 1326 1465 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12081 1326 1465 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12081 Q9UKV3 838 Q9UKV3 Q9UKV3 Apoptotic chromatin condensation inducer in the nucleus ACIN1 sp|Q9UKV3|ACINU_HUMAN Apoptotic chromatin condensation inducer in the nucleus OS=Homo sapiens GN=ACIN1 PE=1 SV=2 0.887477 8.96916 1.829E-22 256.28 220.93 137.72 1 S KISVVSATKGVPAGNSDTEGGQPGRKRRWGA X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPXXXXX GVPAGNS(0.887)DT(0.113)EGGQPGRK GVPAGNS(8.97)DT(-8.97)EGGQPGRK 7 3 0.66221 15161 0 0 20039 0 0 15543 0 0 20652 0 0 27284 0 0 16169 0 0 28282 0 0 21446 0 0 22076 0 0 7952.7 0 0 14347 0 0 18933 0 0 15775 0 0 21096 0 0 27003 0 0 16489 0 0 28571 0 0 21547 0 0 22046 0 0 7984.8 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 29073000 29073000 0 0 NaN 3930 2180 838 838 1674;1675 1766;1767 1908;1909 2126;2127 1909 2127 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7783 1908 2126 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7242 1908 2126 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7242 Q9UKV3 825 Q9UKV3 Q9UKV3 Apoptotic chromatin condensation inducer in the nucleus ACIN1 sp|Q9UKV3|ACINU_HUMAN Apoptotic chromatin condensation inducer in the nucleus OS=Homo sapiens GN=ACIN1 PE=1 SV=2 0.988578 19.3791 0.000356144 121.66 73.371 121.66 1 S EKKESSLPKSFKRKISVVSATKGVPAGNSDT X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX KIS(0.989)VVS(0.011)ATK KIS(19.38)VVS(-19.38)AT(-47.7)K 3 2 -0.6667 37290 0 0 21024 0 0 38197 0 0 18073 0 0 34640 0 0 38022 0 0 37642 0 0 29717 0 0 21482 0 0 14913 0 0 35290 0 0 19843 0 0 38372 0 0 19058 0 0 35390 0 0 37145 0 0 37730 0 0 30580 0 0 21882 0 0 14730 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25878000 25878000 0 0 NaN 3931 2180 825 825 2100 2221 2392 2666 2392 2666 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13729 2392 2666 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13729 2392 2666 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13729 Q9UKV3 863 Q9UKV3 Q9UKV3 Apoptotic chromatin condensation inducer in the nucleus ACIN1 sp|Q9UKV3|ACINU_HUMAN Apoptotic chromatin condensation inducer in the nucleus OS=Homo sapiens GN=ACIN1 PE=1 SV=2 0.992286 21.0938 3.92231E-11 197.51 161.12 197.51 1 S KRRWGASTATTQKKPSISITTESLKSLIPDI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX KPS(0.992)IS(0.008)ITTESLK KPS(21.09)IS(-21.09)IT(-63.64)T(-72.12)ES(-105.92)LK 3 3 -0.13812 25413 0 0 12685 0 0 24888 0 0 13744 0 0 25096 0 0 26508 0 0 26646 0 0 22655 0 0 15470 0 0 17667 0 0 24046 0 0 11989 0 0 25097 0 0 14252 0 0 25467 0 0 25986 0 0 26743 0 0 23407 0 0 15738 0 0 17160 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28892000 28892000 0 0 NaN 3932 2180 863 863 2167 2289 2463 2743 2463 2743 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17290 2463 2743 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17290 2463 2743 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17290 Q9UKV3 657 Q9UKV3 Q9UKV3 Apoptotic chromatin condensation inducer in the nucleus ACIN1 sp|Q9UKV3|ACINU_HUMAN Apoptotic chromatin condensation inducer in the nucleus OS=Homo sapiens GN=ACIN1 PE=1 SV=2 0.995813 24.3162 0.0027296 99.257 44.193 99.257 1 S RSRSRSASSNSRKSLSPGVSRDSSTSYTETK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX S(0.004)LS(0.996)PGVS(0.001)R S(-24.32)LS(24.32)PGVS(-32.98)R 3 2 -0.10949 72615 0 0 52804 0 0 72656 0 0 48367 0 0 43563 0 0 72300 0 0 45468 0 0 55342 0 0 50478 0 0 5397 0 0 68713 0 0 49857 0 0 72806 0 0 50317 0 0 45957 0 0 71199 0 0 46328 0 0 56332 0 0 49594 0 0 6362.7 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 80432000 80432000 0 0 NaN 3933 2180 657 657 2215;3993 2341;4258 2522;4545 2815;5053 4545 5053 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9166 4545 5053 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9166 4545 5053 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9166 Q9UKV3 729 Q9UKV3 Q9UKV3 Apoptotic chromatin condensation inducer in the nucleus ACIN1 sp|Q9UKV3|ACINU_HUMAN Apoptotic chromatin condensation inducer in the nucleus OS=Homo sapiens GN=ACIN1 PE=1 SV=2 1 93.7657 0.00263955 93.766 58.878 93.766 1 S SAEKHVTQRLQPERGSPKKCEAEEAEPPAAT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX LQPERGS(1)PK LQPERGS(93.77)PK 7 3 0.02812 159280 0 0 190770 0 0 174090 0 0 193240 0 0 159010 0 0 152990 0 0 177730 0 0 167410 0 0 190190 0 0 20481 0 0 150780 0 0 180230 0 0 174300 0 0 197610 0 0 162530 0 0 155370 0 0 180360 0 0 167980 0 0 187130 0 0 23160 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 655310000 655310000 0 0 NaN 3934 2180 729 729 2525 2667 2863 3193;3194 2863 3194 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8578 2863 3194 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8578 2863 3194 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8578 Q9UKV3 710 Q9UKV3 Q9UKV3 Apoptotic chromatin condensation inducer in the nucleus ACIN1 sp|Q9UKV3|ACINU_HUMAN Apoptotic chromatin condensation inducer in the nucleus OS=Homo sapiens GN=ACIN1 PE=1 SV=2 1 81.1233 2.88217E-08 175.66 139.32 175.66 1 S ERTSTSSSSVQARRLSQPESAEKHVTQRLQP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX RLS(1)QPESAEK RLS(81.12)QPES(-81.12)AEK 3 3 -0.1017 63257 0 0 57677 0 0 63513 0 0 59626 0 0 117230 0 0 59987 0 0 120030 0 0 78314 0 0 50673 0 0 17051 0 0 59858 0 0 54496 0 0 64602 0 0 61109 0 0 115770 0 0 60374 0 0 120150 0 0 78358 0 0 52940 0 0 17868 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 969720000 969720000 0 0 NaN 3935 2180 710 710 2582;3340 2726;3542 2924;3779 3258;4197 3779 4197 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8902 3779 4197 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8902 3779 4197 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8902 Q9UKV3 987 Q9UKV3 Q9UKV3 Apoptotic chromatin condensation inducer in the nucleus ACIN1 sp|Q9UKV3|ACINU_HUMAN Apoptotic chromatin condensation inducer in the nucleus OS=Homo sapiens GN=ACIN1 PE=1 SV=2 0.784745 5.89404 0.0001893 110.92 77.053 110.92 1 S TLGDTLTRRSISQQKSGVSITIDDPVRTAQV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(0.785)GVS(0.202)IT(0.013)IDDPVR S(5.89)GVS(-5.89)IT(-17.72)IDDPVR 1 2 -0.13098 18275 0 0 17353 0 0 19748 0 0 16334 0 0 19052 0 0 20433 0 0 17156 0 0 17318 0 0 18724 0 0 42712 0 0 17299 0 0 16387 0 0 19789 0 0 16900 0 0 19350 0 0 20340 0 0 17597 0 0 18779 0 0 18409 0 0 40620 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11694000 11694000 0 0 NaN 3936 2180 987 987 3830 4083 4356 4841 4356 4841 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17060 4356 4841 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17060 4356 4841 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17060 Q9UKV3 384 Q9UKV3 Q9UKV3 Apoptotic chromatin condensation inducer in the nucleus ACIN1 sp|Q9UKV3|ACINU_HUMAN Apoptotic chromatin condensation inducer in the nucleus OS=Homo sapiens GN=ACIN1 PE=1 SV=2 0.50892 0 0.0394528 50.653 29.3 50.653 2 S EEEREIKSSQGLKEKSKSPSPPRLTEDRKKA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX S(0.509)KS(0.509)PS(0.648)PPRLT(0.334)EDR S(0)KS(0)PS(2.9)PPRLT(-2.9)EDR 1 3 -0.31345 0 69470 0 0 62396 0 0 61299 0 0 70542 0 0 74542 0 0 65087 0 0 72140 0 0 67776 0 0 73220 0 0 18510 0 0 65706 0 0 58990 0 0 62352 0 0 71845 0 0 74830 0 0 65552 0 0 73577 0 0 68438 0 0 72201 0 0 18998 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 77105000 0 77105000 0 NaN 3937 2180 384 384 3908;3909 4166;4167 4447 4944;4945 4447 4944 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9729 4447 4944 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9729 4447 4944 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9729 Q9UKV3 386 Q9UKV3 Q9UKV3 Apoptotic chromatin condensation inducer in the nucleus ACIN1 sp|Q9UKV3|ACINU_HUMAN Apoptotic chromatin condensation inducer in the nucleus OS=Homo sapiens GN=ACIN1 PE=1 SV=2 0.640486 1.71589 0.0394528 50.653 29.3 40.493 2 S EREIKSSQGLKEKSKSPSPPRLTEDRKKASL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX S(0.472)KS(0.64)PS(0.785)PPRLT(0.102)EDR S(-1.72)KS(1.72)PS(6.1)PPRLT(-9.08)EDR 3 3 -0.84178 0 69470 0 0 62396 0 0 61299 0 0 70542 0 0 74542 0 0 65087 0 0 72140 0 0 67776 0 0 73220 0 0 18510 0 0 65706 0 0 58990 0 0 62352 0 0 71845 0 0 74830 0 0 65552 0 0 73577 0 0 68438 0 0 72201 0 0 18998 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 77105000 0 77105000 0 NaN 3938 2180 386 386 3908;3909 4166;4167 4447;4448 4944;4945;4946 4448 4946 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10083 4447 4944 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9729 4447 4944 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9729 Q9UKV3 388 Q9UKV3 Q9UKV3 Apoptotic chromatin condensation inducer in the nucleus ACIN1 sp|Q9UKV3|ACINU_HUMAN Apoptotic chromatin condensation inducer in the nucleus OS=Homo sapiens GN=ACIN1 PE=1 SV=2 0.916382 10.5056 0.00952873 74.944 33.827 74.944 1;2 S EIKSSQGLKEKSKSPSPPRLTEDRKKASLVA X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPXXXXXXX S(0.002)KS(0.082)PS(0.916)PPR S(-26.5)KS(-10.51)PS(10.51)PPR 5 3 0.50343 12586 69470 0 15961 62396 0 15601 61299 0 16844 70542 0 15367 74542 0 15752 65087 0 14763 72140 0 16254 67776 0 17150 73220 0 4185.6 18510 0 11921 65706 0 15083 58990 0 15532 62352 0 17224 71845 0 15602 74830 0 15852 65552 0 15122 73577 0 16410 68438 0 16820 72201 0 4317.4 18998 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 90181000 13077000 77105000 0 NaN 3939 2180 388 388 3908;3909 4166;4167 4446;4447;4448 4943;4944;4945;4946 4446 4943 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6573 4446 4943 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6573 4446 4943 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6573 Q9UKV3 328 Q9UKV3 Q9UKV3 Apoptotic chromatin condensation inducer in the nucleus ACIN1 sp|Q9UKV3|ACINU_HUMAN Apoptotic chromatin condensation inducer in the nucleus OS=Homo sapiens GN=ACIN1 PE=1 SV=2 1 174.463 3.09413E-11 211.39 166.64 174.46 1 S RVKPEEMMDERPKTRSQEQEVLERGGRFTRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX S(1)QEQEVLER S(174.46)QEQEVLER 1 2 0.30782 24510 0 0 30743 0 0 24196 0 0 26074 0 0 84251 0 0 27384 0 0 83363 0 0 45116 0 0 27623 0 0 13212 0 0 23192 0 0 29015 0 0 25115 0 0 27078 0 0 81887 0 0 27637 0 0 83373 0 0 44966 0 0 29620 0 0 13485 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 61448000 61448000 0 0 NaN 3940 2180 328 328 4226;4904 4504;5229 4800;5572 5326;6194 4800 5326 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10228 5572 6194 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9138 5572 6194 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9138 Q9UKV3 216 Q9UKV3 Q9UKV3 Apoptotic chromatin condensation inducer in the nucleus ACIN1 sp|Q9UKV3|ACINU_HUMAN Apoptotic chromatin condensation inducer in the nucleus OS=Homo sapiens GN=ACIN1 PE=1 SV=2 0.999999 58.3282 6.29956E-11 201.32 165.4 201.32 1 S HSPRKSSSISEEKGDSDDEKPRKGERRSSRV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPXXXXXXXXX SSSISEEKGDS(1)DDEKPR S(-107.51)S(-107.59)S(-92.27)IS(-58.33)EEKGDS(58.33)DDEKPR 11 3 0.064347 33315 0 0 45232 0 0 35320 0 0 45889 0 0 41710 0 0 36352 0 0 47815 0 0 45887 0 0 49995 0 0 9848.5 0 0 31532 0 0 42733 0 0 35539 0 0 46924 0 0 42038 0 0 37002 0 0 48438 0 0 45955 0 0 49237 0 0 10336 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37452000 37452000 0 0 NaN 3941 2180 216 216 4424 4714 5018 5566 5018 5566 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8721 5018 5566 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8721 5018 5566 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8721 Q9UKV3 1004 Q9UKV3 Q9UKV3 Apoptotic chromatin condensation inducer in the nucleus ACIN1 sp|Q9UKV3|ACINU_HUMAN Apoptotic chromatin condensation inducer in the nucleus OS=Homo sapiens GN=ACIN1 PE=1 SV=2 1 92.0894 3.23043E-05 137.4 105.46 137.4 1 S VSITIDDPVRTAQVPSPPRGKISNIVHISNL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX TAQVPS(1)PPR T(-92.09)AQVPS(92.09)PPR 6 2 -0.42385 122230 0 0 136730 0 0 119350 0 0 140470 0 0 135660 0 0 119550 0 0 126040 0 0 132850 0 0 141790 0 0 14603 0 0 115650 0 0 129190 0 0 120520 0 0 143670 0 0 136580 0 0 120960 0 0 129190 0 0 133180 0 0 139230 0 0 16825 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 374050000 374050000 0 0 NaN 3942 2180 1004 1004 4622 4930 5251;5252 5832;5833;5834 5251 5833 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9996 5251 5833 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9996 5251 5833 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9996 Q9UKV3 365 Q9UKV3 Q9UKV3 Apoptotic chromatin condensation inducer in the nucleus ACIN1 sp|Q9UKV3|ACINU_HUMAN Apoptotic chromatin condensation inducer in the nucleus OS=Homo sapiens GN=ACIN1 PE=1 SV=2 0.994484 24.0133 5.55177E-29 291.08 257.68 291.08 1 S SHLARQQQEKEMKTTSPLEEEEREIKSSQGL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX T(0.004)T(0.002)S(0.994)PLEEEER T(-24.01)T(-28.02)S(24.01)PLEEEER 3 2 0.33209 45540 0 0 67511 0 0 46540 0 0 52555 0 0 55668 0 0 44108 0 0 50252 0 0 52916 0 0 61880 0 0 5411.5 0 0 43097 0 0 63690 0 0 46907 0 0 54739 0 0 55888 0 0 44709 0 0 51731 0 0 52900 0 0 60564 0 0 6320.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 76238000 76238000 0 0 NaN 3943 2180 365 365 4986 5315 5663 6292 5663 6292 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9419 5663 6292 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9419 5663 6292 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9419 Q9UKX7 221 Q9UKX7 Q9UKX7 Nuclear pore complex protein Nup50 NUP50 sp|Q9UKX7|NUP50_HUMAN Nuclear pore complex protein Nup50 OS=Homo sapiens GN=NUP50 PE=1 SV=2 0.899725 9.6566 3.20481E-05 131.67 108.43 131.67 1 S RNSESESNKVAAETQSPSLFGSTKLQQESTF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPXXXXXXX VAAET(0.003)QS(0.9)PS(0.097)LFGSTK VAAET(-24.92)QS(9.66)PS(-9.66)LFGS(-89.03)T(-94.51)K 7 3 -0.75759 15384 0 0 14856 0 0 13911 0 0 16114 0 0 8771.5 0 0 16326 0 0 11160 0 0 14539 0 0 16256 0 0 8802.3 0 0 14552 0 0 14041 0 0 14034 0 0 16472 0 0 9243.4 0 0 16349 0 0 11385 0 0 14918 0 0 15823 0 0 8624.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37299000 37299000 0 0 NaN 3944 2181 221 221 5039 5373 5725 6364 5725 6364 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17344 5725 6364 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17344 5725 6364 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17344 Q9ULD5 6 Q9ULD5 Q9ULD5 Zinc finger protein 777 ZNF777 sp|Q9ULD5|ZN777_HUMAN Zinc finger protein 777 OS=Homo sapiens GN=ZNF777 PE=1 SV=2 0.493623 0 0.0254091 56.407 36.359 56.407 S __________MENQRSSPLSFPSVPQEETLR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.494)S(0.494)PLS(0.013)FPSVPQEETLR S(0)S(0)PLS(-15.89)FPS(-42.58)VPQEET(-56.31)LR 1 3 0.81344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3945 2182 6 6 4384 4671 4975 5521 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19757 4975 5521 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19757 4975 5521 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19757 Q9ULD5 7 Q9ULD5 Q9ULD5 Zinc finger protein 777 ZNF777 sp|Q9ULD5|ZN777_HUMAN Zinc finger protein 777 OS=Homo sapiens GN=ZNF777 PE=1 SV=2 0.493623 0 0.0254091 56.407 36.359 56.407 S _________MENQRSSPLSFPSVPQEETLRQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.494)S(0.494)PLS(0.013)FPSVPQEETLR S(0)S(0)PLS(-15.89)FPS(-42.58)VPQEET(-56.31)LR 2 3 0.81344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3946 2182 7 7 4384 4671 4975 5521 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19757 4975 5521 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19757 4975 5521 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19757 Q9ULH0 1633 Q9ULH0 Q9ULH0 Kinase D-interacting substrate of 220 kDa KIDINS220 sp|Q9ULH0|KDIS_HUMAN Kinase D-interacting substrate of 220 kDa OS=Homo sapiens GN=KIDINS220 PE=1 SV=3 0.997318 25.7031 2.84465E-07 158.58 142.76 158.58 1 S EDDSHSGKRGIPHSLSGLQDPIIARMSICSE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPXXXXXX GIPHS(0.003)LS(0.997)GLQDPIIAR GIPHS(-25.7)LS(25.7)GLQDPIIAR 7 3 -0.1886 3901.2 0 0 5190 0 0 3660.9 0 0 6162.6 0 0 4581.6 0 0 4092.4 0 0 4882.4 0 0 4637.4 0 0 6122.1 0 0 10319 0 0 3690.6 0 0 4908.3 0 0 3712 0 0 6234.9 0 0 4600.5 0 0 4220.7 0 0 4989.4 0 0 4941.5 0 0 5988.1 0 0 9824 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16054000 16054000 0 0 NaN 3947 2183 1633 1633 1475 1552 1674 1854 1674 1854 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19940 1674 1854 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19940 1674 1854 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19940 Q9ULH0 918 Q9ULH0 Q9ULH0 Kinase D-interacting substrate of 220 kDa KIDINS220 sp|Q9ULH0|KDIS_HUMAN Kinase D-interacting substrate of 220 kDa OS=Homo sapiens GN=KIDINS220 PE=1 SV=3 0.990007 19.9596 0.00665968 92.112 73.332 92.112 1 S TYRRRQMQRTITRQMSFDLTKLLVTEDWFSD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX QMS(0.99)FDLT(0.01)K QMS(19.96)FDLT(-19.96)K 3 2 -3.5504 17865 0 0 63816 0 0 18444 0 0 62253 0 0 23144 0 0 14490 0 0 21858 0 0 37224 0 0 64599 0 0 44624 0 0 16907 0 0 60276 0 0 18594 0 0 63247 0 0 23231 0 0 17025 0 0 23482 0 0 37802 0 0 61927 0 0 42881 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28516000 28516000 0 0 NaN 3948 2183 918 918 3086 3274 3503 3883 3503 3883 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18953 3503 3883 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18953 3503 3883 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18953 Q9ULH0 1555 Q9ULH0 Q9ULH0 Kinase D-interacting substrate of 220 kDa KIDINS220 sp|Q9ULH0|KDIS_HUMAN Kinase D-interacting substrate of 220 kDa OS=Homo sapiens GN=KIDINS220 PE=1 SV=3 0.961393 13.9623 0.000126495 110.74 94.745 110.74 1 S DKDRKAEGKVERVPKSPEHSAEPIRTFIKAK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX VPKS(0.961)PEHS(0.039)AEPIR VPKS(13.96)PEHS(-13.96)AEPIR 4 3 0.39766 15318 0 0 38568 0 0 15338 0 0 36046 0 0 17758 0 0 17056 0 0 19044 0 0 26030 0 0 39853 0 0 9102.1 0 0 14494 0 0 36420 0 0 15475 0 0 36860 0 0 17916 0 0 18074 0 0 19893 0 0 26036 0 0 38440 0 0 9173.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 39282000 39282000 0 0 NaN 3949 2183 1555 1555 5204 5548 5912 6569 5912 6569 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9556 5912 6569 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9556 5912 6569 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9556 Q9ULI0 318 Q9ULI0 Q9ULI0 ATPase family AAA domain-containing protein 2B ATAD2B sp|Q9ULI0|ATD2B_HUMAN ATPase family AAA domain-containing protein 2B OS=Homo sapiens GN=ATAD2B PE=1 SV=3 0.999976 46.2462 0.00465572 88.106 65.099 88.106 1 S AHQKKRENTLFDIHRSPARRSHIRRKKHAIH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX ENTLFDIHRS(1)PAR ENT(-46.25)LFDIHRS(46.25)PAR 10 3 0.77876 12229 0 0 9775.9 0 0 10748 0 0 10850 0 0 7871.6 0 0 10656 0 0 8909.6 0 0 10371 0 0 12568 0 0 6540.1 0 0 11567 0 0 9241 0 0 10875 0 0 11072 0 0 8176.1 0 0 10699 0 0 9119.6 0 0 10611 0 0 12246 0 0 6398.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 41970000 41970000 0 0 NaN 3950 2184 318 318 1081 1139 1227 1349 1227 1349 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13393 1227 1349 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13393 1227 1349 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13393 Q9ULI0 939 Q9ULI0 Q9ULI0 ATPase family AAA domain-containing protein 2B ATAD2B sp|Q9ULI0|ATD2B_HUMAN ATPase family AAA domain-containing protein 2B OS=Homo sapiens GN=ATAD2B PE=1 SV=3 1 65.7535 0.0138413 65.753 49.988 65.753 1 S HAALCAMEVLPLALPSPPRQLSESEKSRMED X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX HAALCAMEVLPLALPS(1)PPR HAALCAMEVLPLALPS(65.75)PPR 16 3 2.0658 10689 0 0 10559 0 0 9078.7 0 0 10583 0 0 20064 0 0 9679.3 0 0 12124 0 0 12603 0 0 12037 0 0 52642 0 0 10108 0 0 9975 0 0 9353.8 0 0 10850 0 0 19600 0 0 9878.2 0 0 12720 0 0 14115 0 0 11881 0 0 49860 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 11664000 11664000 0 0 NaN 3951 2184 939 939 1691 1783 1925 2143;2144 1925 2143 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21445 1925 2143 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21445 1925 2143 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21445 Q9ULJ3 435 Q9ULJ3 Q9ULJ3 Zinc finger and BTB domain-containing protein 21 ZBTB21 sp|Q9ULJ3|ZBT21_HUMAN Zinc finger and BTB domain-containing protein 21 OS=Homo sapiens GN=ZBTB21 PE=1 SV=2 0.72161 4.15801 0.00768708 80.314 64.014 80.314 1 S GASPVTEVRIKTEPSSPLSDPSDIIRVTVGD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPXXXXX IKT(0.001)EPS(0.277)S(0.722)PLS(0.001)DPSDIIR IKT(-31.19)EPS(-4.16)S(4.16)PLS(-29.54)DPS(-44.62)DIIR 7 3 2.0043 9534 0 0 13428 0 0 11240 0 0 14244 0 0 9664.9 0 0 10684 0 0 11342 0 0 11966 0 0 14838 0 0 18462 0 0 9028 0 0 12690 0 0 11204 0 0 14518 0 0 9928 0 0 10919 0 0 11560 0 0 12510 0 0 14492 0 0 17661 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24045000 24045000 0 0 NaN 3952 2185 435 435 1871 1975 2133 2391 2133 2391 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17467 2133 2391 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17467 2133 2391 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17467 Q9ULJ3 411 Q9ULJ3 Q9ULJ3 Zinc finger and BTB domain-containing protein 21 ZBTB21 sp|Q9ULJ3|ZBT21_HUMAN Zinc finger and BTB domain-containing protein 21 OS=Homo sapiens GN=ZBTB21 PE=1 SV=2 0.971703 16.0106 1.81817E-09 182.25 138.74 182.25 1 S DDRPQVLQPHRLRSFSASQSTDREGASPVTE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX S(0.024)FS(0.972)AS(0.004)QSTDR S(-16.01)FS(16.01)AS(-23.91)QS(-76.89)T(-91.21)DR 3 2 0.43842 30152 0 0 26801 0 0 27443 0 0 27326 0 0 20222 0 0 28569 0 0 21941 0 0 27679 0 0 26559 0 0 9742.8 0 0 28521 0 0 25321 0 0 27704 0 0 28046 0 0 20977 0 0 28588 0 0 22378 0 0 28092 0 0 26010 0 0 9814.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19269000 19269000 0 0 NaN 3953 2185 411 411 3755 3995 4259 4734 4259 4734 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8274 4259 4734 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8274 4259 4734 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8274 Q9ULL5 487 Q9ULL5 Q9ULL5 Proline-rich protein 12 PRR12 sp|Q9ULL5|PRR12_HUMAN Proline-rich protein 12 OS=Homo sapiens GN=PRR12 PE=1 SV=2 0.999157 30.7366 9.20399E-05 103.95 78.627 103.95 1 S KRHPPLYQAGLTPPLSPPKSVPPSVPARGLQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPXXXXXXXXXXXX HPPLYQAGLT(0.001)PPLS(0.999)PPK HPPLY(-69.33)QAGLT(-30.74)PPLS(30.74)PPK 14 3 0.76092 5939.3 0 0 5902.9 0 0 6527.1 0 0 5609.6 0 0 6636.8 0 0 6149.4 0 0 6923.1 0 0 7359.6 0 0 5506.3 0 0 12604 0 0 5622.3 0 0 5574.6 0 0 6540.5 0 0 5786.3 0 0 6731.3 0 0 6178.7 0 0 6994.6 0 0 7715.2 0 0 5493.2 0 0 12039 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19919000 19919000 0 0 NaN 3954 2186 487 487 1734 1828 1973 2199 1973 2199 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18174 1973 2199 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18174 1973 2199 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18174 Q9ULM3 536 Q9ULM3 Q9ULM3 YEATS domain-containing protein 2 YEATS2 sp|Q9ULM3|YETS2_HUMAN YEATS domain-containing protein 2 OS=Homo sapiens GN=YEATS2 PE=1 SV=2 0.966503 14.602 3.11431E-07 148.52 134.27 148.52 1 S TNKISTASQVSQGTGSPVPKIHGSSFVTSTV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPXXXXXXXXXXX ISTASQVSQGT(0.033)GS(0.967)PVPK IS(-118.68)T(-113.43)AS(-101.02)QVS(-76.67)QGT(-14.6)GS(14.6)PVPK 13 3 -0.14535 16136 0 0 22274 0 0 16349 0 0 16812 0 0 15403 0 0 16830 0 0 16751 0 0 18789 0 0 21440 0 0 11499 0 0 15269 0 0 21010 0 0 16441 0 0 17596 0 0 15711 0 0 16915 0 0 17115 0 0 19117 0 0 20956 0 0 11262 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25341000 25341000 0 0 NaN 3955 2187 536 536 1954 2065 2229 2490 2229 2490 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13148 2229 2490 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13148 2229 2490 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13148 Q9ULM3 447 Q9ULM3 Q9ULM3 YEATS domain-containing protein 2 YEATS2 sp|Q9ULM3|YETS2_HUMAN YEATS domain-containing protein 2 OS=Homo sapiens GN=YEATS2 PE=1 SV=2 0.999988 49.3688 0.00907359 76.704 58.437 76.704 1 S SSCKIVPQSQVPNPESPGKSFQPITMSCKIV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX IVPQSQVPNPES(1)PGK IVPQS(-49.37)QVPNPES(49.37)PGK 12 3 -1.9373 10989 0 0 8680.7 0 0 13335 0 0 11181 0 0 12337 0 0 11595 0 0 11347 0 0 12155 0 0 12165 0 0 6660.9 0 0 10407 0 0 8214.6 0 0 13278 0 0 11334 0 0 12565 0 0 11623 0 0 11620 0 0 12371 0 0 11968 0 0 6553.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23833000 23833000 0 0 NaN 3956 2187 447 447 1978 2091 2255 2518 2255 2518 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15449 2255 2518 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15449 2255 2518 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15449 Q9ULM3 465 Q9ULM3 Q9ULM3 YEATS domain-containing protein 2 YEATS2 sp|Q9ULM3|YETS2_HUMAN YEATS domain-containing protein 2 OS=Homo sapiens GN=YEATS2 PE=1 SV=2 0.909131 11.4979 0.0105918 72.585 57.895 72.585 1 S KSFQPITMSCKIVSGSPISTPSPSPLPRTPT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPXXX IVS(0.064)GS(0.909)PIS(0.025)T(0.001)PSPSPLPR IVS(-11.5)GS(11.5)PIS(-15.54)T(-29.42)PS(-43.01)PS(-52.92)PLPR 5 3 0.76424 4672.8 0 0 5334.5 0 0 6469.7 0 0 5358 0 0 6112.5 0 0 5906.7 0 0 7264 0 0 6715.5 0 0 5068.1 0 0 4943.4 0 0 4428.4 0 0 5039.5 0 0 6409.1 0 0 5508.8 0 0 6238.3 0 0 5915.5 0 0 7278.7 0 0 6853.7 0 0 5093.9 0 0 4810.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15924000 15924000 0 0 NaN 3957 2187 465 465 1980 2094 2258 2521 2258 2521 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17840 2258 2521 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17840 2258 2521 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17840 Q9ULM3 575 Q9ULM3 Q9ULM3 YEATS domain-containing protein 2 YEATS2 sp|Q9ULM3|YETS2_HUMAN YEATS domain-containing protein 2 OS=Homo sapiens GN=YEATS2 PE=1 SV=2 0.936344 11.676 4.30546E-07 149.32 116.77 149.32 1 S SMPPLCPIGSHPKVQSPKPITGGLGAFTKVI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX VQS(0.936)PKPIT(0.064)GGLGAFTK VQS(11.68)PKPIT(-11.68)GGLGAFT(-97.75)K 3 3 0.12652 14280 0 0 16732 0 0 14971 0 0 17928 0 0 15938 0 0 14157 0 0 15440 0 0 16871 0 0 18719 0 0 14560 0 0 13515 0 0 15813 0 0 15046 0 0 18274 0 0 16113 0 0 14420 0 0 15831 0 0 17257 0 0 18331 0 0 14100 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25539000 25539000 0 0 NaN 3958 2187 575 575 5231 5576 5944 6608 5944 6608 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18934 5944 6608 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18934 5944 6608 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18934 Q9ULQ0 318 Q9ULQ0 Q9ULQ0 Striatin-interacting protein 2 STRIP2 sp|Q9ULQ0|STRP2_HUMAN Striatin-interacting protein 2 OS=Homo sapiens GN=STRIP2 PE=1 SV=2 0.804734 6.15027 9.19983E-18 247.02 214.46 247.02 1 S LAEDSIQVVKSMRAASPPSYTLDLGESQLAP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP AAS(0.805)PPS(0.195)YTLDLGESQLAPPPSK AAS(6.15)PPS(-6.15)Y(-108.27)T(-63.46)LDLGES(-193.4)QLAPPPS(-236.67)K 3 3 1.2902 6295.8 0 0 15445 0 0 7854.2 0 0 14949 0 0 8167.6 0 0 7127.6 0 0 10055 0 0 12483 0 0 13664 0 0 87311 0 0 5963.2 0 0 14587 0 0 7826.5 0 0 15254 0 0 8300.1 0 0 7725.1 0 0 10243 0 0 14945 0 0 13329 0 0 82502 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 17096000 17096000 0 0 NaN 3959 2188 318 318 72 77 85 97;98 85 97 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20281 85 97 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20281 85 97 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20281 Q9ULR3 123 Q9ULR3 Q9ULR3 Protein phosphatase 1H PPM1H sp|Q9ULR3|PPM1H_HUMAN Protein phosphatase 1H OS=Homo sapiens GN=PPM1H PE=1 SV=2 0.5 0 0.000160188 108.45 79.147 108.45 1 S GAVTSTPNRNSSKRRSSLPNGEGLQLKENSE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPXXXX RS(0.5)S(0.5)LPNGEGLQLK RS(0)S(0)LPNGEGLQLK 2 3 -0.91384 6914.8 0 0 12834 0 0 6210.3 0 0 13686 0 0 9246.4 0 0 5182.7 0 0 11204 0 0 7861 0 0 18335 0 0 3694.4 0 0 6540.5 0 0 12129 0 0 6334.8 0 0 13863 0 0 9238.4 0 0 5614.9 0 0 11506 0 0 7892.7 0 0 17788 0 0 3660.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29532000 29532000 0 0 NaN 3960 2189 123 123 3500 3717 3963 4401 3963 4401 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14786 3963 4401 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14786 3963 4401 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14786 Q9ULR3 124 Q9ULR3 Q9ULR3 Protein phosphatase 1H PPM1H sp|Q9ULR3|PPM1H_HUMAN Protein phosphatase 1H OS=Homo sapiens GN=PPM1H PE=1 SV=2 0.5 0 0.000160188 108.45 79.147 108.45 1 S AVTSTPNRNSSKRRSSLPNGEGLQLKENSES X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RS(0.5)S(0.5)LPNGEGLQLK RS(0)S(0)LPNGEGLQLK 3 3 -0.91384 6914.8 0 0 12834 0 0 6210.3 0 0 13686 0 0 9246.4 0 0 5182.7 0 0 11204 0 0 7861 0 0 18335 0 0 3694.4 0 0 6540.5 0 0 12129 0 0 6334.8 0 0 13863 0 0 9238.4 0 0 5614.9 0 0 11506 0 0 7892.7 0 0 17788 0 0 3660.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29532000 29532000 0 0 NaN 3961 2189 124 124 3500 3717 3963 4401 3963 4401 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14786 3963 4401 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14786 3963 4401 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14786 Q9ULU4 547 Q9ULU4 Q9ULU4 Protein kinase C-binding protein 1 ZMYND8 sp|Q9ULU4|PKCB1_HUMAN Protein kinase C-binding protein 1 OS=Homo sapiens GN=ZMYND8 PE=1 SV=2 0.99998 49.2986 4.68408E-16 215.36 201.49 215.36 1 S LSESVQQQSTPVPLISPKRQIRSRFQLNLDK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX ELSESVQQQSTPVPLIS(1)PKR ELS(-166.11)ES(-139.65)VQQQS(-49.3)T(-50.93)PVPLIS(49.3)PKR 17 3 -0.22093 17650 0 0 28233 0 0 19409 0 0 26080 0 0 23583 0 0 18808 0 0 23378 0 0 25893 0 0 30685 0 0 46034 0 0 16708 0 0 26659 0 0 19493 0 0 26793 0 0 23690 0 0 19352 0 0 24007 0 0 27085 0 0 29967 0 0 43946 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 106950000 106950000 0 0 NaN 3962 2190 547 547 1044;1045 1100;1101 1188;1189 1307;1308 1189 1308 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17024 1189 1308 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17024 1189 1308 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17024 Q9ULU4 737 Q9ULU4 Q9ULU4 Protein kinase C-binding protein 1 ZMYND8 sp|Q9ULU4|PKCB1_HUMAN Protein kinase C-binding protein 1 OS=Homo sapiens GN=ZMYND8 PE=1 SV=2 1 66.4365 0.0110439 66.436 41.643 66.436 1 S SGREGRKNKKEPKEPSPKQDVVGKTPPSTTV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX EPS(1)PKQDVVGK EPS(66.44)PKQDVVGK 3 3 0.8086 12948 0 0 13171 0 0 12455 0 0 16042 0 0 17458 0 0 12712 0 0 16435 0 0 15087 0 0 14484 0 0 5553.8 0 0 12250 0 0 12459 0 0 12629 0 0 16242 0 0 17405 0 0 12930 0 0 16726 0 0 15209 0 0 14374 0 0 5578.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13651000 13651000 0 0 NaN 3963 2190 737 737 1094 1152 1240 1364 1240 1364 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11871 1240 1364 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11871 1240 1364 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11871 Q9ULU4 406 Q9ULU4 Q9ULU4 Protein kinase C-binding protein 1 ZMYND8 sp|Q9ULU4|PKCB1_HUMAN Protein kinase C-binding protein 1 OS=Homo sapiens GN=ZMYND8 PE=1 SV=2 0.993632 21.9319 5.48445E-07 170.95 103.87 170.95 1 S IDKQEKVKLNFDMTASPKILMSKPVLSGGTG X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX LNFDMT(0.006)AS(0.994)PK LNFDMT(-21.93)AS(21.93)PK 8 2 -0.10446 36923 0 0 56936 0 0 38384 0 0 53534 0 0 43212 0 0 38369 0 0 43666 0 0 44350 0 0 57891 0 0 84413 0 0 34944 0 0 53766 0 0 38627 0 0 54931 0 0 43586 0 0 39370 0 0 44816 0 0 46798 0 0 56518 0 0 80511 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 63463000 63463000 0 0 NaN 3964 2190 406 406 2474;5145 2612;2613;5482 2806;2807;5839 3133;3134;6491 2807 3134 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19496 2807 3134 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19496 2807 3134 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19496 Q9ULU4 425 Q9ULU4 Q9ULU4 Protein kinase C-binding protein 1 ZMYND8 sp|Q9ULU4|PKCB1_HUMAN Protein kinase C-binding protein 1 OS=Homo sapiens GN=ZMYND8 PE=1 SV=2 0.996763 24.885 0.000634371 107.97 81.849 107.97 1 S LMSKPVLSGGTGRRISLSDMPRSPMSTNSSV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX RIS(0.997)LS(0.003)DMPR RIS(24.88)LS(-24.88)DMPR 3 2 -0.3198 12326 0 0 15592 0 0 15091 0 0 13982 0 0 22307 0 0 15567 0 0 23094 0 0 15994 0 0 13508 0 0 6719.7 0 0 11674 0 0 14720 0 0 15127 0 0 14480 0 0 22213 0 0 15551 0 0 23207 0 0 16229 0 0 13735 0 0 6697.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 36711000 36711000 0 0 NaN 3965 2190 425 425 3282 3482 3719 4132 3719 4132 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14902 3719 4132 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14902 3719 4132 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14902 Q9ULU4 12 Q9ULU4 Q9ULU4 Protein kinase C-binding protein 1 ZMYND8 sp|Q9ULU4|PKCB1_HUMAN Protein kinase C-binding protein 1 OS=Homo sapiens GN=ZMYND8 PE=1 SV=2 0.999141 30.6547 0.0153161 68.676 50.051 68.676 1 S ____MDISTRSKDPGSAERTAQKRKFPSPPH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX S(0.001)KDPGS(0.999)AER S(-30.65)KDPGS(30.65)AER 6 2 -0.27579 5662.7 0 0 9136.8 0 0 5629 0 0 9570.2 0 0 6597.1 0 0 5193.9 0 0 5372.2 0 0 7979.4 0 0 10600 0 0 2420.1 0 0 5358.2 0 0 8633.7 0 0 5679.5 0 0 9729.7 0 0 6625.2 0 0 5440.9 0 0 5670.5 0 0 7968.9 0 0 10238 0 0 2463.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10219000 10219000 0 0 NaN 3966 2190 12 12 3881 4135 4412 4906 4412 4906 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5926 4412 4906 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5926 4412 4906 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5926 Q9ULU4 475 Q9ULU4 Q9ULU4 Protein kinase C-binding protein 1 ZMYND8 sp|Q9ULU4|PKCB1_HUMAN Protein kinase C-binding protein 1 OS=Homo sapiens GN=ZMYND8 PE=1 SV=2 0.999779 37.6748 6.98277E-06 146.79 101.22 146.79 1 S SASEESMDFLDKSTASPASTKTGQAGSLSGS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY) XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX STAS(1)PASTK S(-45.49)T(-46.8)AS(37.67)PAS(-37.67)T(-61.89)K 4 2 -0.1265 42947 0 0 59493 0 0 43330 0 0 61559 0 0 73947 0 0 40242 0 0 70415 0 0 60699 0 0 65073 0 0 5982.1 0 0 40640 0 0 56213 0 0 43977 0 0 62738 0 0 73179 0 0 41556 0 0 71699 0 0 60273 0 0 64435 0 0 7037.7 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 71276000 71276000 0 0 NaN 3967 2190 475 475 4496 4788 5100 5663;5664 5100 5664 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6932 5100 5664 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6932 5100 5664 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6932 Q9ULU4 652 Q9ULU4 Q9ULU4 Protein kinase C-binding protein 1 ZMYND8 sp|Q9ULU4|PKCB1_HUMAN Protein kinase C-binding protein 1 OS=Homo sapiens GN=ZMYND8 PE=1 SV=2 0.999715 37.0846 2.62073E-08 176.41 85.487 176.41 1 S KPTNPVEIKEELKSTSPASEKADPGAVKDKA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX STS(1)PASEK S(-37.08)T(-40.53)S(37.08)PAS(-60.29)EK 3 2 -0.2778 49350 0 0 73370 0 0 49033 0 0 70319 0 0 68771 0 0 47848 0 0 71861 0 0 68594 0 0 78099 0 0 3146.9 0 0 46697 0 0 69293 0 0 49639 0 0 72027 0 0 68674 0 0 49229 0 0 73170 0 0 68095 0 0 76795 0 0 4550.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 83559000 83559000 0 0 NaN 3968 2190 652 652 4523 4822 5137 5705 5137 5705 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7006 5137 5705 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7006 5137 5705 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7006 Q9ULU4 490 Q9ULU4 Q9ULU4 Protein kinase C-binding protein 1 ZMYND8 sp|Q9ULU4|PKCB1_HUMAN Protein kinase C-binding protein 1 OS=Homo sapiens GN=ZMYND8 PE=1 SV=2 0.981964 17.5537 1.52964E-24 261.78 235.97 261.78 1;2 S SPASTKTGQAGSLSGSPKPFSPQLSAPITTK Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPPPPPP TGQAGS(0.001)LS(0.017)GS(0.982)PKPFSPQLSAPITTK T(-99.4)GQAGS(-31.14)LS(-17.55)GS(17.55)PKPFS(-44.67)PQLS(-98.63)APIT(-142.3)T(-152.19)K 10 3 -0.3237 15314 7726.9 0 32215 12013 0 16954 8689.3 0 31552 13151 0 29833 12902 0 17795 10336 0 31482 13215 0 28899 11463 0 36996 12996 0 16066 9531.9 0 14498 7315.2 0 30429 11355 0 17138 8746.4 0 32216 13388 0 29542 12848 0 18620 10518 0 32117 13431 0 29042 11742 0 36270 12833 0 15797 9240.7 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 91059000 67508000 23551000 0 NaN 3969 2190 490 490 4724 5035;5036 5364;5365 5965;5966 5364 5965 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18542 5364 5965 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18542 5364 5965 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18542 Q9ULV3 350 Q9ULV3 Q9ULV3 Cip1-interacting zinc finger protein CIZ1 sp|Q9ULV3|CIZ1_HUMAN Cip1-interacting zinc finger protein OS=Homo sapiens GN=CIZ1 PE=1 SV=2 0.846299 8.40093 8.44378E-16 218.07 173.88 218.07 1 S TQVQPKLQKQAQTQTSPEHLVLQQKQVQPQL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPXXXXXX QAQT(0.031)QT(0.122)S(0.846)PEHLVLQQK QAQT(-14.31)QT(-8.4)S(8.4)PEHLVLQQK 7 3 -0.37966 27999 0 0 44797 0 0 23652 0 0 43487 0 0 26091 0 0 29245 0 0 26507 0 0 34046 0 0 48911 0 0 11502 0 0 26478 0 0 42311 0 0 24097 0 0 44502 0 0 26360 0 0 30031 0 0 27575 0 0 34311 0 0 47311 0 0 11619 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 71180000 71180000 0 0 NaN 3970 2191 350 350 2997 3176 3399 3769 3399 3769 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14004 3399 3769 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14004 3399 3769 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14004 Q9ULV3 514 Q9ULV3 Q9ULV3 Cip1-interacting zinc finger protein CIZ1 sp|Q9ULV3|CIZ1_HUMAN Cip1-interacting zinc finger protein OS=Homo sapiens GN=CIZ1 PE=1 SV=2 0.992477 21.2034 6.83184E-08 156.65 143.06 156.65 1 S GGMEKTLPEPVGTQVSMEEIQNESACGLDVG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPPPPPPP TLPEPVGT(0.008)QVS(0.992)MEEIQNESACGLDVGECENR T(-65.92)LPEPVGT(-21.2)QVS(21.2)MEEIQNES(-65.53)ACGLDVGECENR 11 4 -1.6245 14813 0 0 19539 0 0 15390 0 0 18561 0 0 17014 0 0 15611 0 0 18047 0 0 19028 0 0 19764 0 0 104970 0 0 14019 0 0 18453 0 0 15486 0 0 19070 0 0 17186 0 0 16019 0 0 18367 0 0 22117 0 0 19428 0 0 99280 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 21909000 21909000 0 0 NaN 3971 2191 514 514 4781 5099 5433 6041;6042;6043;6044 5433 6042 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20357 5433 6042 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20357 5433 6042 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20357 Q9ULW0 186 Q9ULW0 Q9ULW0 Targeting protein for Xklp2 TPX2 sp|Q9ULW0|TPX2_HUMAN Targeting protein for Xklp2 OS=Homo sapiens GN=TPX2 PE=1 SV=2 0.728389 4.28417 0.000452063 132.32 78.544 132.32 1 S EEGSAHQDTAEKNASSPEKAKGRHTVPCMPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX NAS(0.272)S(0.728)PEK NAS(-4.28)S(4.28)PEK 4 2 0.16595 27218 0 0 44038 0 0 24440 0 0 40913 0 0 16918 0 0 22520 0 0 16057 0 0 31394 0 0 46975 0 0 3043.3 0 0 25745 0 0 41583 0 0 24675 0 0 41903 0 0 17630 0 0 23511 0 0 17232 0 0 31238 0 0 45039 0 0 3592.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 36853000 36853000 0 0 NaN 3972 2193 186 186 2780 2949 3159 3509 3159 3509 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6519 3159 3509 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6519 3159 3509 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6519 Q9ULW0 738 Q9ULW0 Q9ULW0 Targeting protein for Xklp2 TPX2 sp|Q9ULW0|TPX2_HUMAN Targeting protein for Xklp2 OS=Homo sapiens GN=TPX2 PE=1 SV=2 0.999939 42.1432 0.00074892 99.663 77.085 99.663 1 S GLEIKSSDQPLTVPVSPKFSTRFHC______ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPXXXXXXXXXXXXX SSDQPLTVPVS(1)PK S(-71.45)S(-71.45)DQPLT(-42.14)VPVS(42.14)PK 11 3 0.5931 15132 0 0 17742 0 0 13727 0 0 18246 0 0 13333 0 0 14097 0 0 13830 0 0 15183 0 0 18490 0 0 2964 0 0 14313 0 0 16763 0 0 13899 0 0 18637 0 0 13565 0 0 14334 0 0 14182 0 0 15277 0 0 18046 0 0 3142.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 100420000 100420000 0 0 NaN 3973 2193 738 738 4331 4617 4919 5463 4919 5463 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15482 4919 5463 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15482 4919 5463 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15482 Q9ULX3 352 Q9ULX3 Q9ULX3 RNA-binding protein NOB1 NOB1 sp|Q9ULX3|NOB1_HUMAN RNA-binding protein NOB1 OS=Homo sapiens GN=NOB1 PE=1 SV=1 1 75.0446 0.00815239 75.045 42.547 75.045 1 S NPHLTEDQRFPQLRLSQKARQKTNVFAPDYI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX FPQLRLS(1)QK FPQLRLS(75.04)QK 7 3 -0.33386 6972.7 0 0 7988.5 0 0 6347 0 0 8066.2 0 0 6013.2 0 0 7006.2 0 0 5712.9 0 0 7591.2 0 0 9139.1 0 0 1957.1 0 0 6595.6 0 0 7546.9 0 0 6422.4 0 0 8260.3 0 0 6120.9 0 0 7081 0 0 5923.5 0 0 7650.8 0 0 8872.2 0 0 2018.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14176000 14176000 0 0 NaN 3974 2194 352 352 1303 1374 1479 1641 1479 1641 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18585 1479 1641 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18585 1479 1641 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18585 Q9ULX3 325 Q9ULX3 Q9ULX3 RNA-binding protein NOB1 NOB1 sp|Q9ULX3|NOB1_HUMAN RNA-binding protein NOB1 OS=Homo sapiens GN=NOB1 PE=1 SV=1 0.84521 7.68994 0.0325388 47.844 21.46 47.844 1 S FSRNPKVLNPRGLRYSLPTPKGGKYAINPHL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX GLRY(0.144)S(0.845)LPT(0.011)PK GLRY(-7.69)S(7.69)LPT(-18.89)PK 5 3 0.13744 6216.5 0 0 7298.6 0 0 7430.1 0 0 6277.4 0 0 4843.2 0 0 8064.4 0 0 5176.4 0 0 7449.2 0 0 7254.8 0 0 2357.7 0 0 5886.9 0 0 6888.9 0 0 7380.9 0 0 6536.5 0 0 5074.3 0 0 8000.4 0 0 5310 0 0 7567 0 0 7070.1 0 0 2392.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9989100 9989100 0 0 NaN 3975 2194 325 325 1509 1589 1718 1910 1718 1910 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16419 1718 1910 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16419 1718 1910 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16419 Q9ULX3 201 Q9ULX3 Q9ULX3 RNA-binding protein NOB1 NOB1 sp|Q9ULX3|NOB1_HUMAN RNA-binding protein NOB1 OS=Homo sapiens GN=NOB1 PE=1 SV=1 0.999954 43.4315 0.00798771 82.719 61.519 82.719 1 S EEEEEENGFEDRKDDSDDDGGGWITPSNIKQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPX KDDS(1)DDDGGGWITPSNIK KDDS(43.43)DDDGGGWIT(-43.43)PS(-62.51)NIK 4 3 -2.0253 4434.9 0 0 7660.1 0 0 5370.3 0 0 7147.2 0 0 5644 0 0 5323.3 0 0 4912.8 0 0 6794.9 0 0 7471.1 0 0 17840 0 0 4200.1 0 0 7233.3 0 0 5355.7 0 0 7340.5 0 0 5703.4 0 0 5469.2 0 0 5106 0 0 7296.3 0 0 7263.2 0 0 16956 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9612100 9612100 0 0 NaN 3976 2194 201 201 2026 2144 2310 2577 2310 2577 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17641 2310 2577 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17641 2310 2577 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17641 Q9ULX6 283 Q9ULX6 Q9ULX6 A-kinase anchor protein 8-like AKAP8L sp|Q9ULX6|AKP8L_HUMAN A-kinase anchor protein 8-like OS=Homo sapiens GN=AKAP8L PE=1 SV=3 1 72.4587 4.56973E-10 187.16 143.74 187.16 1 S TADFRTKKKKRKQGGSPDEPDSKATRTDCSD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX QGGS(1)PDEPDSK QGGS(72.46)PDEPDS(-72.46)K 4 2 0.11048 44165 0 0 69778 0 0 41047 0 0 64582 0 0 56424 0 0 44010 0 0 47583 0 0 57206 0 0 70608 0 0 19023 0 0 41780 0 0 65887 0 0 41682 0 0 66297 0 0 56248 0 0 45233 0 0 49490 0 0 57444 0 0 68692 0 0 19236 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 52025000 52025000 0 0 NaN 3977 2195 283 283 2177;3031 2300;3213 2476;3436 2756;3809 3436 3809 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7167 3436 3809 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7167 3436 3809 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7167 Q9UM00 184 Q9UM00 Q9UM00 Transmembrane and coiled-coil domain-containing protein 1 TMCO1 sp|Q9UM00|TMCO1_HUMAN Transmembrane and coiled-coil domain-containing protein 1 OS=Homo sapiens GN=TMCO1 PE=1 SV=1 0.621922 2.16155 0.028457 54.223 37.729 54.223 1 S AATKQAGGFLGPPPPSGKFS___________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPXXXXXXXXXXX QAGGFLGPPPPS(0.622)GKFS(0.378) QAGGFLGPPPPS(2.16)GKFS(-2.16) 12 3 0.12365 4855.7 0 0 7258 0 0 4708.8 0 0 6586.9 0 0 5225.3 0 0 5485.9 0 0 4744 0 0 7775.4 0 0 7644.4 0 0 6965.7 0 0 4594.2 0 0 6852.5 0 0 4755.4 0 0 6786.5 0 0 5268.1 0 0 5589.8 0 0 4931.5 0 0 7920.4 0 0 7419.7 0 0 6739 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7340700 7340700 0 0 NaN 3978 2196 184 184 2994 3173 3396 3766 3396 3766 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18660 3396 3766 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18660 3396 3766 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18660 Q9UMN6 351 Q9UMN6 Q9UMN6 Histone-lysine N-methyltransferase 2B KMT2B sp|Q9UMN6|KMT2B_HUMAN Histone-lysine N-methyltransferase 2B OS=Homo sapiens GN=KMT2B PE=1 SV=1 0.974799 15.875 0.000426102 101.04 63.424 101.04 1 S WQDVPQRRVGSGQGGSPCWKKQEQKLDDEEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX VGS(0.025)GQGGS(0.975)PCWK VGS(-15.88)GQGGS(15.88)PCWK 8 2 0.36363 20900 0 0 17437 0 0 20861 0 0 18382 0 0 15582 0 0 20585 0 0 15099 0 0 18649 0 0 19007 0 0 9984.6 0 0 19776 0 0 16477 0 0 20942 0 0 18852 0 0 16121 0 0 20529 0 0 15500 0 0 19082 0 0 18589 0 0 9833.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16002000 16002000 0 0 NaN 3979 2197 351 351 5119 5456 5811 6462 5811 6462 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14022 5811 6462 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14022 5811 6462 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14022 Q9UMS6 902 Q9UMS6 Q9UMS6 Synaptopodin-2 SYNPO2 sp|Q9UMS6|SYNP2_HUMAN Synaptopodin-2 OS=Homo sapiens GN=SYNPO2 PE=1 SV=2 0.748901 4.74754 4.36455E-07 151.04 115.39 151.04 1 S VVDSDTVQAHAARAQSPTPSLPASWKYSSNV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX AQS(0.749)PT(0.251)PSLPASWK AQS(4.75)PT(-4.75)PS(-38.71)LPAS(-124.92)WK 3 3 -0.16059 17295 0 0 2392.7 0 0 18781 0 0 2981.9 0 0 2922.9 0 0 18394 0 0 3242.5 0 0 8981.5 0 0 3426.8 0 0 4296.4 0 0 16371 0 0 2263.7 0 0 18632 0 0 3273.4 0 0 3907.2 0 0 17639 0 0 3290.3 0 0 9503.3 0 0 3373.4 0 0 4253.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29252000 29252000 0 0 NaN 3980 2199 902 902 401 429 464 516 464 516 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17979 464 516 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17979 464 516 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17979 Q9UMS6 363 Q9UMS6 Q9UMS6 Synaptopodin-2 SYNPO2 sp|Q9UMS6|SYNP2_HUMAN Synaptopodin-2 OS=Homo sapiens GN=SYNPO2 PE=1 SV=2 0.963573 15.2048 0.0473226 52.549 10.825 52.549 1 S PHKHRARHARLRRSESLSEKQVKEAKSKCKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX S(0.029)ES(0.964)LS(0.007)EK S(-15.2)ES(15.2)LS(-21.17)EK 3 2 -1.8268 54929 0 0 20166 0 0 48939 0 0 21930 0 0 18961 0 0 57972 0 0 22109 0 0 33884 0 0 22195 0 0 11988 0 0 51955 0 0 19060 0 0 49262 0 0 22989 0 0 21056 0 0 56220 0 0 22356 0 0 35283 0 0 21896 0 0 12073 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15572000 15572000 0 0 NaN 3981 2199 363 363 3705 3940 4200 4667 4200 4667 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9583 4200 4667 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9583 4200 4667 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9583 Q9UMZ2 234 Q9UMZ2 Q9UMZ2 Synergin gamma SYNRG sp|Q9UMZ2|SYNRG_HUMAN Synergin gamma OS=Homo sapiens GN=SYNRG PE=1 SV=2 0.5 0 0.00149212 103.42 54.996 103.42 1 S KLNTSEVGHKALGPGSSKKYPSLMASNGVAV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPXXXXXXXXXXXXX ALGPGS(0.5)S(0.5)K ALGPGS(0)S(0)K 6 2 -0.095025 20405 0 0 17753 0 0 20743 0 0 18713 0 0 11714 0 0 21170 0 0 11248 0 0 17412 0 0 20149 0 0 4621.7 0 0 19309 0 0 16776 0 0 20756 0 0 19195 0 0 12422 0 0 21072 0 0 11715 0 0 17750 0 0 19503 0 0 4754.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12379000 12379000 0 0 NaN 3982 2200 234 234 291 312 333 372 333 372 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10657 333 372 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10657 333 372 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10657 Q9UMZ2 235 Q9UMZ2 Q9UMZ2 Synergin gamma SYNRG sp|Q9UMZ2|SYNRG_HUMAN Synergin gamma OS=Homo sapiens GN=SYNRG PE=1 SV=2 0.5 0 0.00149212 103.42 54.996 103.42 1 S LNTSEVGHKALGPGSSKKYPSLMASNGVAVD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ALGPGS(0.5)S(0.5)K ALGPGS(0)S(0)K 7 2 -0.095025 20405 0 0 17753 0 0 20743 0 0 18713 0 0 11714 0 0 21170 0 0 11248 0 0 17412 0 0 20149 0 0 4621.7 0 0 19309 0 0 16776 0 0 20756 0 0 19195 0 0 12422 0 0 21072 0 0 11715 0 0 17750 0 0 19503 0 0 4754.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12379000 12379000 0 0 NaN 3983 2200 235 235 291 312 333 372 333 372 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10657 333 372 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10657 333 372 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10657 Q9UMZ2 935 Q9UMZ2 Q9UMZ2 Synergin gamma SYNRG sp|Q9UMZ2|SYNRG_HUMAN Synergin gamma OS=Homo sapiens GN=SYNRG PE=1 SV=2 0.839759 7.36375 1.56665E-05 133.16 114.79 133.16 1 S PSATSILQKKETSFGSSENITMTSLSKVTTF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPXXXX ET(0.003)S(0.004)FGS(0.84)S(0.154)ENITMTSLSK ET(-25.03)S(-23.79)FGS(7.36)S(-7.36)ENIT(-71.98)MT(-95.58)S(-101.74)LS(-113.11)K 6 3 -0.097198 10815 0 0 10456 0 0 10522 0 0 11174 0 0 13159 0 0 9907.6 0 0 9901.9 0 0 12118 0 0 11131 0 0 31883 0 0 10232 0 0 9881.5 0 0 10638 0 0 11409 0 0 13153 0 0 10075 0 0 10269 0 0 13031 0 0 10931 0 0 30302 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16342000 16342000 0 0 NaN 3984 2200 935 935 1194;2053 1255;1256;2172 1354 1501 1354 1501 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16592 1354 1501 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16592 1354 1501 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16592 Q9UMZ2 936 Q9UMZ2 Q9UMZ2 Synergin gamma SYNRG sp|Q9UMZ2|SYNRG_HUMAN Synergin gamma OS=Homo sapiens GN=SYNRG PE=1 SV=2 0.543089 2.13787 1.28888E-07 159.73 120.64 123.6 1 S SATSILQKKETSFGSSENITMTSLSKVTTFV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPXXXXX ET(0.043)S(0.082)FGS(0.332)S(0.543)ENITMTSLSK ET(-11.02)S(-8.21)FGS(-2.14)S(2.14)ENIT(-69.59)MT(-100.84)S(-109.56)LS(-115.81)K 7 3 0.11308 21383 0 0 23574 0 0 22483 0 0 22991 0 0 20208 0 0 21008 0 0 22921 0 0 22117 0 0 25530 0 0 14192 0 0 20238 0 0 22266 0 0 22553 0 0 23610 0 0 20683 0 0 21187 0 0 23273 0 0 22569 0 0 25080 0 0 13875 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 43028000 43028000 0 0 NaN 3985 2200 936 936 1194;2053 1255;1256;2172 1355 1502 1355 1502 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19100 2340 2607 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17730 2340 2607 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17730 Q9UMZ2 752 Q9UMZ2 Q9UMZ2 Synergin gamma SYNRG sp|Q9UMZ2|SYNRG_HUMAN Synergin gamma OS=Homo sapiens GN=SYNRG PE=1 SV=2 0.996663 24.7523 8.81547E-12 183.48 159.21 183.48 1 S NSTAASTKYDVFRQLSLEGSGLGVEDLKDNT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP QLS(0.997)LEGS(0.003)GLGVEDLKDNTPSGK QLS(24.75)LEGS(-24.75)GLGVEDLKDNT(-129.18)PS(-147.25)GK 3 3 0.028582 10060 0 0 7164.3 0 0 9747.3 0 0 8217.5 0 0 9254.2 0 0 8545.1 0 0 10412 0 0 10890 0 0 7500.6 0 0 27033 0 0 9518.2 0 0 6773.8 0 0 9829.1 0 0 8378.5 0 0 9433.9 0 0 8630.9 0 0 10464 0 0 11647 0 0 7524.3 0 0 25706 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8575500 8575500 0 0 NaN 3986 2200 752 752 3074;3075 3260;3261 3488;3489 3864;3865 3489 3865 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19573 3489 3865 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19573 3489 3865 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19573 Q9UMZ2 1075 Q9UMZ2 Q9UMZ2 Synergin gamma SYNRG sp|Q9UMZ2|SYNRG_HUMAN Synergin gamma OS=Homo sapiens GN=SYNRG PE=1 SV=2 0.999449 32.5888 1.88133E-07 167.61 121.54 167.61 1 S ATFDLSVQGSHKRSLSLGDKEISRSSPSPAL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX S(0.001)LS(0.999)LGDKEISR S(-32.59)LS(32.59)LGDKEIS(-92.02)R 3 3 0.084647 19685 0 0 13319 0 0 21134 0 0 11091 0 0 13030 0 0 20449 0 0 13826 0 0 15056 0 0 12349 0 0 2515.3 0 0 18632 0 0 12570 0 0 21100 0 0 11674 0 0 13711 0 0 20017 0 0 13995 0 0 15387 0 0 12247 0 0 2716.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 77960000 77960000 0 0 NaN 3987 2200 1075 1075 3988 4252 4539 5047 4539 5047 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14731 4539 5047 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14731 4539 5047 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14731 Q9UN36 332 Q9UN36 Q9UN36 Protein NDRG2 NDRG2 sp|Q9UN36|NDRG2_HUMAN Protein NDRG2 OS=Homo sapiens GN=NDRG2 PE=1 SV=2 0.999136 31.5381 1.14863E-23 285.81 257.43 103.84 1;2 S MASSCMTRLSRSRTASLTSAASVDGNRSRSR X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPXXXX S(0.407)RT(0.593)AS(0.999)LT(0.001)SAASVDGNR S(-1.63)RT(1.63)AS(31.54)LT(-31.54)S(-49.84)AAS(-73.99)VDGNR 5 3 -0.43237 17090 11055 0 36265 9768.2 0 18855 12451 0 33287 10921 0 14769 10231 0 17939 15853 0 15635 9599.8 0 24785 11564 0 37572 12059 0 14179 11660 0 16178 10467 0 34241 9234.3 0 18836 12429 0 34113 11222 0 15262 10507 0 18779 15638 0 16475 9869.4 0 25023 12117 0 36142 11795 0 13925 11247 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 47315000 34949000 12365000 0 NaN 3988 2201 332 332 4311;4634 4596;4943 4897;5265 5440;5848 4897 5440 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9624 5265 5848 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11491 5265 5848 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11491 Q9UN86 225 Q9UN86 Q9UN86 Ras GTPase-activating protein-binding protein 2 G3BP2 sp|Q9UN86|G3BP2_HUMAN Ras GTPase-activating protein-binding protein 2 OS=Homo sapiens GN=G3BP2 PE=1 SV=2 0.370397 0 1.45492E-07 154.72 135.04 154.72 S KPQVEEKNLEELEEKSTTPPPAEPVSLPQEP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.37)T(0.37)T(0.259)PPPAEPVSLPQEPPK S(0)T(0)T(-1.55)PPPAEPVS(-90.51)LPQEPPK 1 3 -0.47861 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 3989 2202 225 225 4539 4841 5158 5727 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16048 5158 5727 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16048 5158 5727 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16048 Q9UNE7 19 Q9UNE7 Q9UNE7 E3 ubiquitin-protein ligase CHIP STUB1 sp|Q9UNE7|CHIP_HUMAN E3 ubiquitin-protein ligase CHIP OS=Homo sapiens GN=STUB1 PE=1 SV=2 1 147.39 3.086E-06 147.39 89.02 147.39 1 S KEEKEGGARLGAGGGSPEKSPSAQELKEQGN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPXXXX LGAGGGS(1)PEK LGAGGGS(147.39)PEK 7 2 -0.22603 66694 0 0 110710 0 0 67665 0 0 112030 0 0 45538 0 0 67096 0 0 47796 0 0 78078 0 0 123860 0 0 20539 0 0 63113 0 0 104590 0 0 67812 0 0 114230 0 0 47622 0 0 69436 0 0 50626 0 0 78512 0 0 118980 0 0 21147 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 389370000 389370000 0 0 NaN 3990 2203 19 19 2359;2360 2492;2493 2681;2682 2994;2995 2681 2994 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10627 2681 2994 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10627 2681 2994 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10627 Q9UNF0 387 Q9UNF0 Q9UNF0 Protein kinase C and casein kinase substrate in neurons protein 2 PACSIN2 sp|Q9UNF0|PACN2_HUMAN Protein kinase C and casein kinase substrate in neurons protein 2 OS=Homo sapiens GN=PACSIN2 PE=1 SV=2 0.506064 0.105346 0.00111879 121.61 65.35 121.61 1 S STVSEKDDTKAKNVSSYEKTQSYPTDWSDDE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX NVS(0.494)S(0.506)YEK NVS(-0.11)S(0.11)Y(-70.55)EK 4 2 0.71957 20635 0 0 17892 0 0 20444 0 0 17640 0 0 59744 0 0 20370 0 0 59354 0 0 32625 0 0 16394 0 0 9052.6 0 0 19525 0 0 16901 0 0 21078 0 0 18172 0 0 58262 0 0 20467 0 0 59259 0 0 32524 0 0 17998 0 0 9279.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19816000 19816000 0 0 NaN 3991 2204 387 387 2962 3141 3363 3728 3363 3728 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10826 3363 3728 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10826 3363 3728 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10826 Q9UNF1 247 Q9UNF1 Q9UNF1 Melanoma-associated antigen D2 MAGED2 sp|Q9UNF1|MAGD2_HUMAN Melanoma-associated antigen D2 OS=Homo sapiens GN=MAGED2 PE=1 SV=2 0.99987 38.8613 0.00689617 79.311 34.713 79.311 1 S TRLAAWARRALLSLRSPKARRGKARRRAAKL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX ALLSLRS(1)PK ALLS(-38.86)LRS(38.86)PK 7 3 -0.18972 5787.9 0 0 16370 0 0 5912.1 0 0 15803 0 0 12822 0 0 5982.7 0 0 13218 0 0 11913 0 0 17315 0 0 1234.9 0 0 5477.3 0 0 15461 0 0 6031.4 0 0 16103 0 0 12613 0 0 6511.7 0 0 13548 0 0 11757 0 0 16911 0 0 1438.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 35068000 35068000 0 0 NaN 3992 2205 247 247 299 320 341 381 341 381 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16300 341 381 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16300 341 381 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16300 Q9UNL2 105 Q9UNL2 Q9UNL2 Translocon-associated protein subunit gamma SSR3 sp|Q9UNL2|SSRG_HUMAN Translocon-associated protein subunit gamma OS=Homo sapiens GN=SSR3 PE=1 SV=1 1 58.831 0.0116802 85.274 53.78 58.831 1 S QKREDAVSKEVTRKLSEADNRKMSRKEKDER X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX KLS(1)EADNRK KLS(58.83)EADNRK 3 3 -0.95225 54488 0 0 26840 0 0 53849 0 0 25691 0 0 35532 0 0 56846 0 0 37552 0 0 41307 0 0 27414 0 0 6435.5 0 0 51557 0 0 25348 0 0 54039 0 0 26949 0 0 37159 0 0 55406 0 0 37850 0 0 42230 0 0 27479 0 0 7015.8 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 81203000 81203000 0 0 NaN 3993 2206 105 105 2124;2125 2245;2246 2418;2419 2695;2696 2419 2696 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8246 2418 2695 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7691 2418 2695 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7691 Q9UNN5 582 Q9UNN5 Q9UNN5 FAS-associated factor 1 FAF1 sp|Q9UNN5|FAF1_HUMAN FAS-associated factor 1 OS=Homo sapiens GN=FAF1 PE=1 SV=2 0.916787 10.4208 3.57579E-07 160.03 122.7 160.03 1 S EENAEPVSKLRIRTPSGEFLERRFLASNKLQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX IRT(0.083)PS(0.917)GEFLER IRT(-10.42)PS(10.42)GEFLER 5 3 0.28775 4395.2 0 0 16277 0 0 4420.6 0 0 15511 0 0 9689.7 0 0 3973 0 0 10143 0 0 10765 0 0 15932 0 0 2080.2 0 0 4159.1 0 0 15372 0 0 4515.2 0 0 15788 0 0 9533.9 0 0 4586.3 0 0 10461 0 0 10598 0 0 15474 0 0 2207.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 62134000 62134000 0 0 NaN 3994 2207 582 582 1931;4845 2039;5170 2200 2460 2200 2460 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14501 2200 2460 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14501 2200 2460 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14501 Q9UNN5 320 Q9UNN5 Q9UNN5 FAS-associated factor 1 FAF1 sp|Q9UNN5|FAF1_HUMAN FAS-associated factor 1 OS=Homo sapiens GN=FAF1 PE=1 SV=2 1 220.243 7.23167E-18 233.49 221.53 233.49 1 S DDGEVFGMASSALRKSPMMPENAENEGDALL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Oxidation (M);Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(1)PMMPENAENEGDALLQFTAEFSSR S(220.24)PMMPENAENEGDALLQFT(-220.24)AEFS(-230.01)S(-230.95)R 1 3 -1.244 7213.5 0 0 8170.8 0 0 10283 0 0 8929.3 0 0 9323 0 0 7605.6 0 0 10990 0 0 13531 0 0 8509.4 0 0 213280 0 0 6837.4 0 0 7723 0 0 10170 0 0 9100.8 0 0 9539 0 0 8158.5 0 0 11039 0 0 19770 0 0 8501.5 0 0 201140 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 90903000 90903000 0 0 NaN 3995 2207 320 320 4132 4405 4696 5212 4696 5212 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23744 4696 5212 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23744 4696 5212 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23744 Q9UNS1 1087 Q9UNS1 Q9UNS1 Protein timeless homolog TIMELESS sp|Q9UNS1|TIM_HUMAN Protein timeless homolog OS=Homo sapiens GN=TIMELESS PE=1 SV=2 0.986617 18.676 0.00801967 76.151 47.574 76.151 1 S PASGQETFWRIPAKLSPTQLRRAAASLSQPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX IPAKLS(0.987)PT(0.013)QLR IPAKLS(18.68)PT(-18.68)QLR 6 3 0.33668 10381 0 0 12942 0 0 10302 0 0 13895 0 0 4389.9 0 0 9396.1 0 0 5467 0 0 9276.3 0 0 14675 0 0 3435.7 0 0 9822.3 0 0 12231 0 0 10308 0 0 14137 0 0 4827.9 0 0 9624 0 0 5765.4 0 0 9412.9 0 0 14090 0 0 3449.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30820000 30820000 0 0 NaN 3996 2208 1087 1087 1902 2009 2169 2429 2169 2429 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16805 2169 2429 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16805 2169 2429 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16805 Q9UNS2 423 Q9UNS2 Q9UNS2 COP9 signalosome complex subunit 3 COPS3 sp|Q9UNS2|CSN3_HUMAN COP9 signalosome complex subunit 3 OS=Homo sapiens GN=COPS3 PE=1 SV=3 0.834296 7.02401 5.55112E-11 196.11 186.88 196.11 1 S MGSQEDDSGNKPSSYS_______________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPXXXXXXXXXXXXXXX SMGSQEDDSGNKPSS(0.166)YS(0.834) S(-188.09)MGS(-181.7)QEDDS(-131)GNKPS(-37.23)S(-7.02)Y(-65.03)S(7.02) 17 3 -0.76955 17566 0 0 27609 0 0 16916 0 0 28635 0 0 25707 0 0 19067 0 0 28307 0 0 24868 0 0 28228 0 0 11235 0 0 16619 0 0 26087 0 0 17184 0 0 29185 0 0 25606 0 0 19632 0 0 28687 0 0 25058 0 0 27856 0 0 11154 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 50510000 50510000 0 0 NaN 3997 2209 423 423 4029 4296 4584 5092 4584 5092 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9373 4584 5092 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9373 4584 5092 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9373 Q9UNZ2 114 Q9UNZ2 Q9UNZ2 NSFL1 cofactor p47 NSFL1C sp|Q9UNZ2|NSF1C_HUMAN NSFL1 cofactor p47 OS=Homo sapiens GN=NSFL1C PE=1 SV=2 1 192.546 8.10878E-11 192.55 157.93 192.55 1 S SERSGQQIVGPPRKKSPNELVDDLFKGAKEH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX KKS(1)PNELVDDLFK KKS(192.55)PNELVDDLFK 3 4 0.21488 2914.8 0 0 4886.4 0 0 3301.4 0 0 5017.5 0 0 4890.1 0 0 3211.5 0 0 6254.3 0 0 4650.4 0 0 4948.3 0 0 5995.8 0 0 2759.6 0 0 4616.8 0 0 3324.1 0 0 5114.7 0 0 4886.7 0 0 3329 0 0 6265.1 0 0 4789.6 0 0 4937.9 0 0 5753.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9124900 9124900 0 0 NaN 3998 2210 114 114 2107 2228 2401 2677 2401 2677 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22025 2401 2677 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22025 2401 2677 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22025 Q9UNZ2 272 Q9UNZ2 Q9UNZ2 NSFL1 cofactor p47 NSFL1C sp|Q9UNZ2|NSF1C_HUMAN NSFL1 cofactor p47 OS=Homo sapiens GN=NSFL1C PE=1 SV=2 0.99004 20.0599 4.841E-06 136.3 118.65 136.3 1 S GQKLGSTAPQVLSTSSPAQQAENEAKASSSI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPPPXXXXX LGSTAPQVLSTS(0.01)S(0.99)PAQQAENEAK LGS(-84.15)T(-84.68)APQVLS(-46.13)T(-37.61)S(-20.06)S(20.06)PAQQAENEAK 13 3 0.11532 9102.5 0 0 16794 0 0 10962 0 0 17498 0 0 12962 0 0 11578 0 0 10476 0 0 13305 0 0 18681 0 0 31864 0 0 8620.3 0 0 15868 0 0 10951 0 0 17829 0 0 13008 0 0 11951 0 0 11007 0 0 14239 0 0 18085 0 0 30311 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 44790000 44790000 0 0 NaN 3999 2210 272 272 2390 2527 2720 3038 2720 3038 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16662 2720 3038 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16662 2720 3038 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16662 Q9UNZ2 140 Q9UNZ2 Q9UNZ2 NSFL1 cofactor p47 NSFL1C sp|Q9UNZ2|NSF1C_HUMAN NSFL1 cofactor p47 OS=Homo sapiens GN=NSFL1C PE=1 SV=2 0.999894 42.7581 0.0409223 51.762 34.849 51.762 1 S GAKEHGAVAVERVTKSPGETSKPRPFAGGGY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(1)PGETSKPR S(42.76)PGET(-42.76)S(-42.76)KPR 1 2 -1.3671 6504.4 0 0 9585.4 0 0 6117.4 0 0 8253.8 0 0 8503.8 0 0 7568.5 0 0 7639.9 0 0 8326.4 0 0 9870.8 0 0 3277.1 0 0 6153.3 0 0 9047.4 0 0 6209.7 0 0 8545 0 0 8478.7 0 0 7632.6 0 0 7879.3 0 0 8421.4 0 0 9644.9 0 0 3278.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6190600 6190600 0 0 NaN 4000 2210 140 140 4102 4373 4663 5177 4663 5177 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6276 4663 5177 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6276 4663 5177 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6276 Q9UPN3 4521 Q9UPN3 Q9UPN3 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 MACF1 sp|Q9UPN3|MACF1_HUMAN Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 OS=Homo sapiens GN=MACF1 PE=1 SV=4 1 173.788 2.41324E-08 173.79 140.84 173.79 1 S QAESNKAFLAELEQNSPKIQKVKEALAGLLV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX AFLAELEQNS(1)PK AFLAELEQNS(173.79)PK 10 3 -0.59018 3217.7 0 0 7041.1 0 0 3400.4 0 0 7185.4 0 0 7567.2 0 0 4321.8 0 0 6856.1 0 0 6956.5 0 0 7484.2 0 0 7147.6 0 0 3045.4 0 0 6652.3 0 0 3463.2 0 0 7322.9 0 0 7423.8 0 0 4506.3 0 0 7030.3 0 0 7091.1 0 0 7358.1 0 0 6891.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22704000 22704000 0 0 NaN 4001 2211 4521 4521 177 185 199 224 199 224 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21495 199 224 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21495 199 224 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21495 Q9UPN3 3927 Q9UPN3 Q9UPN3 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 MACF1 sp|Q9UPN3|MACF1_HUMAN Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 OS=Homo sapiens GN=MACF1 PE=1 SV=4 0.801621 6.06533 0.00956507 72.642 59.662 72.642 1 S GSSPETLPSLLKRQGSFSEDVISHKGDLRFV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX QGS(0.802)FS(0.198)EDVISHK QGS(6.07)FS(-6.07)EDVIS(-44.78)HK 3 3 -1.508 9293.2 0 0 10213 0 0 9154.2 0 0 10891 0 0 13877 0 0 9842.1 0 0 15063 0 0 12306 0 0 10373 0 0 9699.2 0 0 8793.2 0 0 9651.5 0 0 9285.8 0 0 11125 0 0 13816 0 0 9961.2 0 0 15148 0 0 12541 0 0 10434 0 0 9417.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11319000 11319000 0 0 NaN 4002 2211 3927 3927 3036 3218 3441 3814 3441 3814 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14566 3441 3814 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14566 3441 3814 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14566 Q9UPN3 6967 Q9UPN3 Q9UPN3 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 MACF1 sp|Q9UPN3|MACF1_HUMAN Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 OS=Homo sapiens GN=MACF1 PE=1 SV=4 0.808516 6.26244 3.86279E-08 169.08 150.05 169.08 1 S THAPFIEKSRSGGRKSLSQPTPPPMPILSQS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.809)LS(0.191)QPTPPPMPILSQSEAK S(6.26)LS(-6.26)QPT(-34.27)PPPMPILS(-143.56)QS(-153.19)EAK 1 3 -0.26922 3960.1 0 0 7031.4 0 0 3237.1 0 0 6268.7 0 0 7318.1 0 0 3886.5 0 0 7108.9 0 0 6438.2 0 0 8147 0 0 21420 0 0 3744.6 0 0 6638 0 0 3350.7 0 0 6444.8 0 0 7183.5 0 0 4074.3 0 0 7274.7 0 0 7004.5 0 0 7994.6 0 0 20318 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8331300 8331300 0 0 NaN 4003 2211 6967 6967 4000 4265 4553 5061 4553 5061 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20713 4553 5061 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20713 4553 5061 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20713 Q9UPN3 4496 Q9UPN3 Q9UPN3 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 MACF1 sp|Q9UPN3|MACF1_HUMAN Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 OS=Homo sapiens GN=MACF1 PE=1 SV=4 0.943509 15.2388 1.32047E-10 187.73 159.65 187.73 1 S LESKEEVLKSMDAMSSPTKTETVKAQAESNK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPXXXXXXX SMDAMS(0.028)S(0.944)PT(0.028)KTETVK S(-74.26)MDAMS(-15.24)S(15.24)PT(-15.24)KT(-49.27)ET(-74.83)VK 7 3 -0.32341 26017 0 0 41595 0 0 25494 0 0 37824 0 0 30529 0 0 23595 0 0 33068 0 0 31712 0 0 47004 0 0 23779 0 0 24617 0 0 39272 0 0 25767 0 0 38838 0 0 30732 0 0 24432 0 0 33920 0 0 32211 0 0 45788 0 0 23124 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30630000 30630000 0 0 NaN 4004 2211 4496 4496 4025 4290 4578 5086 4578 5086 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13296 4578 5086 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13296 4578 5086 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13296 Q9UPN4 87 Q9UPN4 Q9UPN4 Centrosomal protein of 131 kDa CEP131 sp|Q9UPN4|CP131_HUMAN Centrosomal protein of 131 kDa OS=Homo sapiens GN=CEP131 PE=1 SV=3 0.490637 0 3.04405E-12 187.43 152.78 187.43 S NLRRSNSTTQVSQPRSGSPRPTEPTDFLMLF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.491)GS(0.491)PRPT(0.014)EPT(0.005)DFLMLFEGSPSGK S(0)GS(0)PRPT(-15.43)EPT(-20.21)DFLMLFEGS(-137.49)PS(-159.1)GK 1 4 -0.33027 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4005 2212 87 87 3813 4062;4063 4335 4817 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23608 4335 4817 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23608 4335 4817 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23608 Q9UPN4 89 Q9UPN4 Q9UPN4 Centrosomal protein of 131 kDa CEP131 sp|Q9UPN4|CP131_HUMAN Centrosomal protein of 131 kDa OS=Homo sapiens GN=CEP131 PE=1 SV=3 0.530628 2.24947 3.04405E-12 187.43 152.78 161.05 1 S RRSNSTTQVSQPRSGSPRPTEPTDFLMLFEG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.122)GS(0.531)PRPT(0.316)EPT(0.032)DFLMLFEGSPSGK S(-6.4)GS(2.25)PRPT(-2.25)EPT(-12.26)DFLMLFEGS(-100.67)PS(-115.39)GK 3 3 -0.13567 19538 0 0 16372 0 0 17131 0 0 17545 0 0 21810 0 0 19475 0 0 22401 0 0 20284 0 0 17158 0 0 66891 0 0 18479 0 0 15472 0 0 17446 0 0 17974 0 0 21860 0 0 19570 0 0 22631 0 0 22331 0 0 17152 0 0 63456 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 53788000 53788000 0 0 NaN 4006 2212 89 89 3813 4062;4063 4334 4816 4334 4816 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23432 4335 4817 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23608 4335 4817 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23608 Q9UPN6 617 Q9UPN6 Q9UPN6 Protein SCAF8 SCAF8 sp|Q9UPN6|SCAF8_HUMAN Protein SCAF8 OS=Homo sapiens GN=SCAF8 PE=1 SV=1 0.999359 33.525 4.61791E-32 317.89 276.81 165.66 1 S VKSSEPVKETVQTTQSPTPVEKETVVTTQAE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPPXXXXXXXXX ETVQTTQS(0.999)PTPVEK ET(-66.27)VQT(-39.41)T(-33.53)QS(33.53)PT(-40.82)PVEK 8 3 0.85768 50275 0 0 57137 0 0 53426 0 0 56801 0 0 36463 0 0 47371 0 0 41278 0 0 53733 0 0 58880 0 0 11051 0 0 47585 0 0 53973 0 0 53417 0 0 58191 0 0 38089 0 0 48004 0 0 42269 0 0 53984 0 0 57350 0 0 11649 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 114290000 114290000 0 0 NaN 4007 2213 617 617 1200;4337 1262;4623 1361;4926 1508;5470 1361 1508 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10916 4926 5470 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12250 4926 5470 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12250 Q9UPN7 759 Q9UPN7 Q9UPN7 Serine/threonine-protein phosphatase 6 regulatory subunit 1 PPP6R1 sp|Q9UPN7|PP6R1_HUMAN Serine/threonine-protein phosphatase 6 regulatory subunit 1 OS=Homo sapiens GN=PPP6R1 PE=1 SV=5 0.847768 8.17212 2.11693E-05 105.98 90.335 105.98 1 S GPLSVPQGLPTQSLASPPARDALQLRSQDPT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX VSGEEELHTGPPAPQGPLSVPQGLPT(0.129)QS(0.023)LAS(0.848)PPAR VS(-94.6)GEEELHT(-86.61)GPPAPQGPLS(-45.72)VPQGLPT(-8.17)QS(-15.65)LAS(8.17)PPAR 31 4 2.5629 3618 0 0 3678.4 0 0 3596.9 0 0 4522.6 0 0 3799.6 0 0 4774.9 0 0 4200.2 0 0 4202.8 0 0 4419.9 0 0 13785 0 0 3423.5 0 0 3479.7 0 0 3626.3 0 0 4596.2 0 0 3849.8 0 0 4793.6 0 0 4262.2 0 0 4653.2 0 0 4351.8 0 0 13078 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19020000 19020000 0 0 NaN 4008 2214 759 759 5247 5593 5962 6626 5962 6626 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19248 5962 6626 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19248 5962 6626 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19248 Q9UPN9 862 Q9UPN9 Q9UPN9 E3 ubiquitin-protein ligase TRIM33 TRIM33 sp|Q9UPN9|TRI33_HUMAN E3 ubiquitin-protein ligase TRIM33 OS=Homo sapiens GN=TRIM33 PE=1 SV=3 0.999873 40.62 0.00803134 79.341 57.5 79.341 1 S ESCKQSGLSSLVNGKSPIRSLMHRSARIGGD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX QSGLSSLVNGKS(1)PIR QS(-52.75)GLS(-44.5)S(-40.62)LVNGKS(40.62)PIR 12 3 -0.10578 12269 0 0 17154 0 0 12696 0 0 17895 0 0 13594 0 0 13978 0 0 12430 0 0 16069 0 0 20894 0 0 7031.2 0 0 11611 0 0 16209 0 0 12768 0 0 18266 0 0 13734 0 0 14225 0 0 12940 0 0 16249 0 0 20258 0 0 6992.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 42624000 42624000 0 0 NaN 4009 2215 862 862 3137 3328 3559 3944 3559 3944 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16105 3559 3944 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16105 3559 3944 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16105 Q9UPP1 1021 Q9UPP1 Q9UPP1 Histone lysine demethylase PHF8 PHF8 sp|Q9UPP1|PHF8_HUMAN Histone lysine demethylase PHF8 OS=Homo sapiens GN=PHF8 PE=1 SV=3 0.895387 9.32428 2.48821E-11 209.23 179.1 209.23 1 S TTPMAPGVFLTQRRPSVGSQSNQAGQGKRPK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX RPS(0.895)VGS(0.105)QSNQAGQGK RPS(9.32)VGS(-9.32)QS(-68.01)NQAGQGK 3 3 2.2888 18623 0 0 9463.3 0 0 20528 0 0 8229.7 0 0 17075 0 0 20724 0 0 17799 0 0 16023 0 0 8709.7 0 0 3196.5 0 0 17629 0 0 8932.6 0 0 20520 0 0 8726 0 0 17534 0 0 20162 0 0 17834 0 0 16351 0 0 8979.3 0 0 3380.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 41750000 41750000 0 0 NaN 4010 2216 1021 1021 3417 3629 3871 4297 3871 4297 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6705 3871 4297 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6705 3871 4297 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6705 Q9UPP1 120 Q9UPP1 Q9UPP1 Histone lysine demethylase PHF8 PHF8 sp|Q9UPP1|PHF8_HUMAN Histone lysine demethylase PHF8 OS=Homo sapiens GN=PHF8 PE=1 SV=3 0.772059 7.9849 0.000218213 134.23 75.247 134.23 1 S SKGHDTHKGKPVKTGSPTFVRELRSRTFDSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX T(0.123)GS(0.772)PT(0.105)FVR T(-7.98)GS(7.98)PT(-8.66)FVR 3 2 1.7576 18102 0 0 13956 0 0 17289 0 0 13950 0 0 19449 0 0 19003 0 0 17390 0 0 16865 0 0 14812 0 0 5523.2 0 0 17126 0 0 13184 0 0 17478 0 0 14405 0 0 19577 0 0 18805 0 0 17730 0 0 17166 0 0 14724 0 0 5591.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21739000 21739000 0 0 NaN 4011 2216 120 120 4733 5047 5378 5981 5378 5981 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10835 5378 5981 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10835 5378 5981 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10835 Q9UPQ3 521 Q9UPQ3 Q9UPQ3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 AGAP1 sp|Q9UPQ3|AGAP1_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 OS=Homo sapiens GN=AGAP1 PE=1 SV=4 1 78.5055 0.00736763 78.505 53.651 78.505 1 S PSISSTTSPKLDPPPSPHANRKKHRRKKSTS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX LDPPPS(1)PHANR LDPPPS(78.51)PHANR 6 3 0.31498 18485 0 0 16806 0 0 18585 0 0 16481 0 0 18769 0 0 18461 0 0 18400 0 0 17818 0 0 18439 0 0 2697.8 0 0 17492 0 0 15875 0 0 18710 0 0 16974 0 0 19031 0 0 18413 0 0 18749 0 0 17979 0 0 18192 0 0 2952.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17012000 17012000 0 0 NaN 4012 2217 521 521 2314 2446 2635 2945 2635 2945 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8582 2635 2945 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8582 2635 2945 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8582 Q9UPR3 2 Q9UPR3 Q9UPR3 Protein SMG5 SMG5 sp|Q9UPR3|SMG5_HUMAN Protein SMG5 OS=Homo sapiens GN=SMG5 PE=1 SV=3 0.999957 43.7309 3.41237E-11 148.28 118.3 148.28 1 S ______________MSQGPPTGESSEPEAKV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPX S(1)QGPPTGESSEPEAK S(43.73)QGPPT(-43.73)GES(-60.83)S(-66.58)EPEAK 1 2 -0.19697 5269 0 0 3434.8 0 0 4580.8 0 0 3075.8 0 0 7535.2 0 0 4029.2 0 0 7906.3 0 0 5678.8 0 0 4461.1 0 0 3733.7 0 0 4983.2 0 0 3242.7 0 0 4689 0 0 3195.3 0 0 7474.3 0 0 4023.8 0 0 7935.8 0 0 5744.8 0 0 4547.9 0 0 3647.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14566000 14566000 0 0 NaN 4013 2218 2 2 4230 4508 4804 5331 4804 5331 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8973 4804 5331 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8973 4804 5331 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8973 Q9UPT8 1114 Q9UPT8 Q9UPT8 Zinc finger CCCH domain-containing protein 4 ZC3H4 sp|Q9UPT8|ZC3H4_HUMAN Zinc finger CCCH domain-containing protein 4 OS=Homo sapiens GN=ZC3H4 PE=1 SV=3 0.984127 17.9906 1.38616E-07 147.49 134.25 147.49 1 S PAEAPSPTASPSGDASPPATAPYDPRVLAAG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPXXXXX AAKPGPAEAPSPTASPS(0.016)GDAS(0.984)PPATAPYDPR AAKPGPAEAPS(-54.56)PT(-49.1)AS(-36.7)PS(-17.99)GDAS(17.99)PPAT(-47.93)APY(-72.32)DPR 21 4 0.23816 6590.3 0 0 5919.3 0 0 7086 0 0 6383.3 0 0 7814 0 0 6860 0 0 8082.5 0 0 6810.4 0 0 5757.5 0 0 27860 0 0 6238 0 0 5594.4 0 0 7116.1 0 0 6533.5 0 0 7888.3 0 0 6906.7 0 0 8150.7 0 0 7672.7 0 0 5779.5 0 0 26391 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20958000 20958000 0 0 NaN 4014 2219 1114 1114 40 43 47 57 47 57 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12955 47 57 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12955 47 57 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12955 Q9UPT8 1269 Q9UPT8 Q9UPT8 Zinc finger CCCH domain-containing protein 4 ZC3H4 sp|Q9UPT8|ZC3H4_HUMAN Zinc finger CCCH domain-containing protein 4 OS=Homo sapiens GN=ZC3H4 PE=1 SV=3 0.961928 14.3329 9.94184E-16 229.44 189.22 229.44 1;2 S TLFGTVKQTPKTGSGSPFAGNSPAREGEQDA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPXXXXXX T(0.003)GS(0.035)GS(0.962)PFAGNSPAR T(-25.68)GS(-14.33)GS(14.33)PFAGNS(-62.96)PAR 5 2 0.20042 25180 31684 0 22983 30971 0 23427 32888 0 22997 26441 0 20026 33099 0 23265 34814 0 18763 32992 0 22206 31146 0 24436 32147 0 6157.5 18358 0 23820 29985 0 21711 29231 0 23646 33049 0 23616 27560 0 20511 33575 0 23306 34511 0 19315 33565 0 22501 31937 0 23871 31755 0 6312 18007 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 76542000 40603000 35939000 0 NaN 4015 2219 1269 1269 4727;4728 5039;5040;5041 5368;5370 5969;5971;5972 5368 5969 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9358 5368 5969 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9358 5368 5969 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9358 Q9UPT8 1275 Q9UPT8 Q9UPT8 Zinc finger CCCH domain-containing protein 4 ZC3H4 sp|Q9UPT8|ZC3H4_HUMAN Zinc finger CCCH domain-containing protein 4 OS=Homo sapiens GN=ZC3H4 PE=1 SV=3 1 115.042 1.16208E-17 242.24 225.22 242.24 1;2 S KQTPKTGSGSPFAGNSPAREGEQDAASLKDV X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPPPPPXX TGSGSPFAGNS(1)PAR T(-149.13)GS(-126.24)GS(-115.04)PFAGNS(115.04)PAR 11 2 -0.046958 38259 31684 0 37976 30971 0 40533 32888 0 38211 26441 0 40761 33099 0 39485 34814 0 46445 32992 0 43847 31146 0 42727 32147 0 27345 18358 0 36211 29985 0 35876 29231 0 40697 33049 0 39240 27560 0 41427 33575 0 39627 34511 0 46902 33565 0 44636 31937 0 42317 31755 0 26763 18007 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 177550000 141620000 35939000 0 NaN 4016 2219 1275 1275 4727;4728 5039;5040;5041 5369;5370;5371 5970;5971;5972;5973 5369 5970 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10165 5369 5970 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10165 5371 5973 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15277 Q9UPU5 1612 Q9UPU5 Q9UPU5 Ubiquitin carboxyl-terminal hydrolase 24 USP24 sp|Q9UPU5|UBP24_HUMAN Ubiquitin carboxyl-terminal hydrolase 24 OS=Homo sapiens GN=USP24 PE=1 SV=3 0.999992 51.7486 9.29522E-24 265.65 229.4 265.65 1 S DDFLFRASRIILNSHSPAGSAAISQQDFHPK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPPPP IILNSHS(1)PAGSAAISQQDFHPK IILNS(-51.75)HS(51.75)PAGS(-59.62)AAIS(-104.45)QQDFHPK 7 4 -1.0254 7583.1 0 0 6905 0 0 7197.6 0 0 7041.1 0 0 6046.4 0 0 7268.1 0 0 9095.3 0 0 9316.1 0 0 7116.2 0 0 9468.2 0 0 7174.1 0 0 6523.7 0 0 7261.4 0 0 7224.9 0 0 6245.1 0 0 7318.6 0 0 9057.6 0 0 9550.7 0 0 7105.5 0 0 9131.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23227000 23227000 0 0 NaN 4017 2220 1612 1612 1860 1964 2121 2378 2121 2378 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16451 2121 2378 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16451 2121 2378 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16451 Q9UPU5 1141 Q9UPU5 Q9UPU5 Ubiquitin carboxyl-terminal hydrolase 24 USP24 sp|Q9UPU5|UBP24_HUMAN Ubiquitin carboxyl-terminal hydrolase 24 OS=Homo sapiens GN=USP24 PE=1 SV=3 0.998446 28.3369 8.33098E-23 258.05 236.43 258.05 1 S RKKTLLSESSSQSSKSPSLSSKQQHQPSASS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPXXXXXXXXX TLLSESSSQSS(0.001)KS(0.998)PSLSSK T(-163.33)LLS(-122.74)ES(-88.63)S(-84.69)S(-69.66)QS(-47.86)S(-28.34)KS(28.34)PS(-41.37)LS(-93.21)S(-88.63)K 13 3 -0.11819 64257 0 0 74156 0 0 66360 0 0 76080 0 0 85789 0 0 64348 0 0 102780 0 0 80825 0 0 80610 0 0 18865 0 0 60811 0 0 70064 0 0 66970 0 0 77811 0 0 86131 0 0 65265 0 0 103200 0 0 81003 0 0 80478 0 0 19634 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 524800000 524800000 0 0 NaN 4018 2220 1141 1141 4180;4777 4455;5094 4748;5427;5428 5267;6035;6036 5427 6035 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14855 5427 6035 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14855 5427 6035 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14855 Q9UPU5 2043 Q9UPU5 Q9UPU5 Ubiquitin carboxyl-terminal hydrolase 24 USP24 sp|Q9UPU5|UBP24_HUMAN Ubiquitin carboxyl-terminal hydrolase 24 OS=Homo sapiens GN=USP24 PE=1 SV=3 0.512247 0.212803 0.0310565 53.777 31.904 53.777 1 S RRRYWNAYMLFYQRVSDQNSPVLPKKSRVSV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPXXXXX VS(0.512)DQNS(0.488)PVLPKK VS(0.21)DQNS(-0.21)PVLPKK 2 3 -0.32905 14750 0 0 15029 0 0 18301 0 0 16960 0 0 26065 0 0 17801 0 0 23747 0 0 20847 0 0 19739 0 0 10391 0 0 13970 0 0 14208 0 0 18314 0 0 17309 0 0 25956 0 0 17863 0 0 24174 0 0 21106 0 0 19646 0 0 10267 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11270000 11270000 0 0 NaN 4019 2220 2043 2043 5240;5241 5585;5586 5954 6618 5954 6618 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13140 5954 6618 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13140 5954 6618 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13140 Q9UPU5 2047 Q9UPU5 Q9UPU5 Ubiquitin carboxyl-terminal hydrolase 24 USP24 sp|Q9UPU5|UBP24_HUMAN Ubiquitin carboxyl-terminal hydrolase 24 OS=Homo sapiens GN=USP24 PE=1 SV=3 0.999911 40.5088 0.000126023 112.02 81.817 112.02 1 S WNAYMLFYQRVSDQNSPVLPKKSRVSVVRQE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX VSDQNS(1)PVLPK VS(-40.51)DQNS(40.51)PVLPK 6 3 -0.11514 18609 0 0 17254 0 0 18940 0 0 19041 0 0 23157 0 0 20915 0 0 28421 0 0 19435 0 0 21759 0 0 2657.6 0 0 17610 0 0 16310 0 0 19114 0 0 19472 0 0 23319 0 0 20867 0 0 28495 0 0 19632 0 0 21753 0 0 2952.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 210640000 210640000 0 0 NaN 4020 2220 2047 2047 5240;5241 5585;5586 5953 6617 5953 6617 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13945 5953 6617 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13945 5953 6617 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13945 Q9UPW5 318 Q9UPW5 Q9UPW5 Cytosolic carboxypeptidase 1 AGTPBP1 sp|Q9UPW5|CBPC1_HUMAN Cytosolic carboxypeptidase 1 OS=Homo sapiens GN=AGTPBP1 PE=1 SV=3 0.53368 1.08545 0.0101529 76.073 38.479 76.073 2 S QECLAVRTLDPLVNTSSLIMRKCFPKNRLPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPXXXXXXXXXX T(0.097)LDPLVNT(0.428)S(0.534)S(0.941)LIMR T(-8.03)LDPLVNT(-1.09)S(1.09)S(11.03)LIMR 9 2 2.7858 0 28892 0 0 24236 0 0 30527 0 0 22748 0 0 25310 0 0 30569 0 0 22049 0 0 26639 0 0 23286 0 0 38702 0 0 27345 0 0 22887 0 0 30575 0 0 23574 0 0 25948 0 0 30316 0 0 22635 0 0 28039 0 0 22924 0 0 37059 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 113770000 0 113770000 0 NaN 4021 2221 318 318 4763 5080 5413 6018;6019 5413 6019 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17139 5413 6019 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17139 5413 6019 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17139 Q9UPW5 319 Q9UPW5 Q9UPW5 Cytosolic carboxypeptidase 1 AGTPBP1 sp|Q9UPW5|CBPC1_HUMAN Cytosolic carboxypeptidase 1 OS=Homo sapiens GN=AGTPBP1 PE=1 SV=3 0.94114 11.0298 0.0101529 76.073 38.479 76.073 2 S ECLAVRTLDPLVNTSSLIMRKCFPKNRLPLP X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPXXXXXXXXXXX T(0.097)LDPLVNT(0.428)S(0.534)S(0.941)LIMR T(-8.03)LDPLVNT(-1.09)S(1.09)S(11.03)LIMR 10 2 2.7858 0 28892 0 0 24236 0 0 30527 0 0 22748 0 0 25310 0 0 30569 0 0 22049 0 0 26639 0 0 23286 0 0 38702 0 0 27345 0 0 22887 0 0 30575 0 0 23574 0 0 25948 0 0 30316 0 0 22635 0 0 28039 0 0 22924 0 0 37059 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 113770000 0 113770000 0 NaN 4022 2221 319 319 4763 5080 5413 6018;6019 5413 6019 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17139 5413 6019 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17139 5413 6019 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17139 Q9UPW6 594 Q9UPW6 Q9UPW6 DNA-binding protein SATB2 SATB2 sp|Q9UPW6|SATB2_HUMAN DNA-binding protein SATB2 OS=Homo sapiens GN=SATB2 PE=1 SV=2 0.958624 13.649 1.27338E-08 169.95 146.77 169.95 1 S VQVLHRQQSQPAKESSPPREEAPPPPPPTED X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP ES(0.041)S(0.959)PPREEAPPPPPPTEDSCAK ES(-13.65)S(13.65)PPREEAPPPPPPT(-97.86)EDS(-113.93)CAK 3 3 0.17574 27733 0 0 13213 0 0 29234 0 0 15629 0 0 5791.8 0 0 31757 0 0 7139.5 0 0 17784 0 0 13780 0 0 5889.4 0 0 26248 0 0 12496 0 0 29066 0 0 16159 0 0 7287 0 0 30948 0 0 7384.5 0 0 18558 0 0 13315 0 0 5957.1 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 23907000 23907000 0 0 NaN 4023 2222 594 594 1170 1231 1329 1469;1470 1329 1469 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10097 1329 1469 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10097 1329 1469 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10097 Q9UPW6 39 Q9UPW6 Q9UPW6 DNA-binding protein SATB2 SATB2 sp|Q9UPW6|SATB2_HUMAN DNA-binding protein SATB2 OS=Homo sapiens GN=SATB2 PE=1 SV=2 1 214.691 1.16636E-14 214.69 158.48 214.69 1 S KGPPPVKVARLEQNGSPMGARGRPNGAVAKA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX LEQNGS(1)PMGAR LEQNGS(214.69)PMGAR 6 2 0.38429 45144 0 0 26449 0 0 45783 0 0 25770 0 0 10865 0 0 45946 0 0 9711.1 0 0 26333 0 0 26015 0 0 5058.5 0 0 42720 0 0 24982 0 0 45634 0 0 26825 0 0 13087 0 0 44917 0 0 10387 0 0 27326 0 0 24978 0 0 5372.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37406000 37406000 0 0 NaN 4024 2222 39 39 2337 2470 2659 2971 2659 2971 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10071 2659 2971 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10071 2659 2971 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10071 Q9UPW6 13 Q9UPW6 Q9UPW6 DNA-binding protein SATB2 SATB2 sp|Q9UPW6|SATB2_HUMAN DNA-binding protein SATB2 OS=Homo sapiens GN=SATB2 PE=1 SV=2 0.88478 10.7018 0.0312763 59.585 31.258 59.585 1 S ___MERRSESPCLRDSPDRRSGSPDVKGPPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPXXXXXXXXXXX S(0.075)ES(0.04)PCLRDS(0.885)PDRR S(-10.7)ES(-13.45)PCLRDS(10.7)PDRR 9 3 0.17331 11256 0 0 7714.3 0 0 9453.2 0 0 6667 0 0 4008 0 0 10245 0 0 4508.5 0 0 6895.1 0 0 6843.2 0 0 2202.6 0 0 10645 0 0 7281.5 0 0 9556.7 0 0 6966.9 0 0 4398.1 0 0 10072 0 0 4629.1 0 0 7112.5 0 0 6653.2 0 0 2233.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13316000 13316000 0 0 NaN 4025 2222 13 13 3709 3944 4204 4671 4204 4671 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6309 4204 4671 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6309 4204 4671 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6309 Q9UPW6 18 Q9UPW6 Q9UPW6 DNA-binding protein SATB2 SATB2 sp|Q9UPW6|SATB2_HUMAN DNA-binding protein SATB2 OS=Homo sapiens GN=SATB2 PE=1 SV=2 0.546185 0.804616 0.00719541 80.609 65.919 80.609 1 S RRSESPCLRDSPDRRSGSPDVKGPPPVKVAR X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX S(0.546)GS(0.454)PDVKGPPPVK S(0.8)GS(-0.8)PDVKGPPPVK 1 3 -0.14813 30917 0 0 13135 0 0 33018 0 0 15621 0 0 9361.4 0 0 31782 0 0 8803 0 0 18756 0 0 17255 0 0 5214.5 0 0 29264 0 0 12422 0 0 32836 0 0 16147 0 0 10897 0 0 30982 0 0 9218.9 0 0 19476 0 0 16667 0 0 5344.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21957000 21957000 0 0 NaN 4026 2222 18 18 3810;3811 4059;4060 4332 4814 4332 4814 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11891 4332 4814 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11891 4332 4814 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11891 Q9UPW6 20 Q9UPW6 Q9UPW6 DNA-binding protein SATB2 SATB2 sp|Q9UPW6|SATB2_HUMAN DNA-binding protein SATB2 OS=Homo sapiens GN=SATB2 PE=1 SV=2 0.957352 13.5117 0.0013862 117.31 67.965 117.31 1 S SESPCLRDSPDRRSGSPDVKGPPPVKVARLE X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX S(0.043)GS(0.957)PDVK S(-13.51)GS(13.51)PDVK 3 2 -0.13691 148300 0 0 60787 0 0 139630 0 0 56875 0 0 10289 0 0 140570 0 0 15391 0 0 66261 0 0 63148 0 0 3323.3 0 0 140290 0 0 57401 0 0 139530 0 0 59982 0 0 18196 0 0 136240 0 0 16729 0 0 69445 0 0 60283 0 0 4662.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 117970000 117970000 0 0 NaN 4027 2222 20 20 3810;3811 4059;4060 4331 4813 4331 4813 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7918 4331 4813 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7918 4331 4813 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7918 Q9UPY5 26 Q9UPY5 Q9UPY5 Cystine/glutamate transporter SLC7A11 sp|Q9UPY5|XCT_HUMAN Cystine/glutamate transporter OS=Homo sapiens GN=SLC7A11 PE=1 SV=1 1 88.2823 0.00478848 88.282 72.144 88.282 1 S SKGGYLQGNVNGRLPSLGNKEPPGQEKVQLK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX LPS(1)LGNKEPPGQEK LPS(88.28)LGNKEPPGQEK 3 3 0.099529 17840 0 0 7931.1 0 0 18515 0 0 8192.6 0 0 10164 0 0 18489 0 0 8841.1 0 0 13316 0 0 8422.5 0 0 9060.7 0 0 16884 0 0 7493.7 0 0 18500 0 0 8561.4 0 0 10788 0 0 18025 0 0 9051.6 0 0 13831 0 0 8328.2 0 0 8839.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11949000 11949000 0 0 NaN 4028 2223 26 26 2509 2650 2846 3175 2846 3175 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16083 2846 3175 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16083 2846 3175 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16083 Q9UPZ3 532 Q9UPZ3 Q9UPZ3 Hermansky-Pudlak syndrome 5 protein HPS5 sp|Q9UPZ3|HPS5_HUMAN Hermansky-Pudlak syndrome 5 protein OS=Homo sapiens GN=HPS5 PE=1 SV=2 0.5 0 4.2431E-11 193.51 152.99 193.51 1 S KNETFLPFGIPLPFRSPSPLVSLQAVKESVS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(0.5)PS(0.5)PLVSLQAVK S(0)PS(0)PLVS(-76.87)LQAVK 1 3 0.053326 10860 0 0 6065.6 0 0 10235 0 0 7002.7 0 0 3958.4 0 0 10625 0 0 5695.2 0 0 7999.6 0 0 6079.2 0 0 4590.9 0 0 10274 0 0 5735.3 0 0 10268 0 0 7191.2 0 0 4412.5 0 0 10464 0 0 5724.3 0 0 8264.2 0 0 5982.1 0 0 4508 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20145000 20145000 0 0 NaN 4029 2225 532 532 4188 4463 4757 5278 4757 5278 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19654 4757 5278 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19654 4757 5278 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19654 Q9UPZ3 534 Q9UPZ3 Q9UPZ3 Hermansky-Pudlak syndrome 5 protein HPS5 sp|Q9UPZ3|HPS5_HUMAN Hermansky-Pudlak syndrome 5 protein OS=Homo sapiens GN=HPS5 PE=1 SV=2 0.5 0 4.2431E-11 193.51 152.99 193.51 1 S ETFLPFGIPLPFRSPSPLVSLQAVKESVSSF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.5)PS(0.5)PLVSLQAVK S(0)PS(0)PLVS(-76.87)LQAVK 3 3 0.053326 10860 0 0 6065.6 0 0 10235 0 0 7002.7 0 0 3958.4 0 0 10625 0 0 5695.2 0 0 7999.6 0 0 6079.2 0 0 4590.9 0 0 10274 0 0 5735.3 0 0 10268 0 0 7191.2 0 0 4412.5 0 0 10464 0 0 5724.3 0 0 8264.2 0 0 5982.1 0 0 4508 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20145000 20145000 0 0 NaN 4030 2225 534 534 4188 4463 4757 5278 4757 5278 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19654 4757 5278 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19654 4757 5278 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19654 Q9UQ35 1403 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.582001 1.44346 2.91104E-07 139.9 114.26 139.9 1 S PDAVEKAGMSSNQSISSPVLDAVPRTPSRER X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPXXXXXX AGMSSNQS(0.001)IS(0.582)S(0.417)PVLDAVPR AGMS(-54.27)S(-45.89)NQS(-30.19)IS(1.44)S(-1.44)PVLDAVPR 10 2 0.51389 5008.8 0 0 4544.8 0 0 4480 0 0 5066.9 0 0 4016.1 0 0 5806.1 0 0 3485.6 0 0 5984 0 0 4910.5 0 0 26100 0 0 4737.6 0 0 4296.2 0 0 4534.8 0 0 5182.5 0 0 4096.7 0 0 5838.1 0 0 3612.5 0 0 6781.9 0 0 4784.7 0 0 24715 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28536000 28536000 0 0 NaN 4031 2226 1403 1403 214;215 224;225;226;227;228;229 242 270 242 270 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16845 242 270 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16845 242 270 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16845 Q9UQ35 1404 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.997979 26.9488 1.01344E-17 241.4 222.63 241.4 1;2 S DAVEKAGMSSNQSISSPVLDAVPRTPSRERS X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPPPPXXX AGMSSNQSIS(0.002)S(0.998)PVLDAVPRT(0.996)PS(0.004)R AGMS(-82.79)S(-75.56)NQS(-53.64)IS(-26.95)S(26.95)PVLDAVPRT(23.57)PS(-23.57)R 11 3 -0.2221 5700.4 17610 0 5795 18384 0 7107.2 21044 0 6406.8 18292 0 5011.1 13883 0 6680.4 22328 0 6137.8 13804 0 5947.6 17639 0 7343.5 19635 0 9268.2 37579 0 5399.3 16676 0 5477.8 17367 0 7052.2 20905 0 6545.4 18852 0 5226.1 14516 0 6692.2 22213 0 6226.7 14215 0 6273.5 19007 0 7194.7 19126 0 8864.8 35794 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 344140000 164090000 180050000 0 NaN 4032 2226 1404 1404 214;215 224;225;226;227;228;229 243;245;247 271;273;275 247 275 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16401 247 275 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16401 247 275 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16401 Q9UQ35 1010 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.773923 6.88246 3.73776E-16 217.68 188.23 217.68 1 S PYPKVKAQTPPGPSLSGSKSPCPQEKSKDSL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPXXXXX AQTPPGPS(0.01)LS(0.774)GS(0.159)KS(0.058)PCPQEK AQT(-41.97)PPGPS(-19)LS(6.88)GS(-6.88)KS(-11.28)PCPQEK 10 3 0.016409 22773 0 0 30353 0 0 25568 0 0 30052 0 0 6986.3 0 0 24672 0 0 8152.8 0 0 21150 0 0 31777 0 0 5274.5 0 0 21559 0 0 28672 0 0 25360 0 0 30789 0 0 8225.7 0 0 24936 0 0 8889.7 0 0 21510 0 0 30353 0 0 5456.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 59884000 59884000 0 0 NaN 4033 2226 1010 1010 410;411;5141;5142 438;439;440;5478;5479 474 528 474 528 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12020 474 528 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12020 474 528 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12020 Q9UQ35 1014 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.973879 15.7209 4.24018E-16 214.92 183.32 214.92 2 S VKAQTPPGPSLSGSKSPCPQEKSKDSLVQSC X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPXXXXXXXXX AQT(1)PPGPSLSGS(0.026)KS(0.974)PCPQEK AQT(95.03)PPGPS(-82.98)LS(-44.49)GS(-15.72)KS(15.72)PCPQEK 14 4 -0.54398 0 32391 0 0 39103 0 0 33597 0 0 37363 0 0 17022 0 0 35214 0 0 18319 0 0 29845 0 0 40620 0 0 31482 0 0 30654 0 0 36929 0 0 33560 0 0 38434 0 0 18292 0 0 35385 0 0 19195 0 0 31093 0 0 39134 0 0 30335 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 199380000 0 199380000 0 NaN 4034 2226 1014 1014 411;5142 439;440;5479 475;5836 529;6488 475 529 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12508 475 529 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12508 475 529 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12508 Q9UQ35 2407 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.999514 35.5827 0.021053 64.331 44.239 64.331 1;2 S RVSGRTSPPLLDRARSRTPPSAPSQSRMTSE X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX ARS(1)RT(0.998)PPS(0.002)APSQSR ARS(35.58)RT(28.65)PPS(-28.65)APS(-35.21)QS(-34.56)R 3 3 -0.51963 6797.2 3206.3 0 2994.2 3363 0 6714.5 2410.3 0 2855.6 3746.4 0 3123.7 2808.9 0 7127.8 3724.2 0 3062.6 2459.4 0 4313.8 3201 0 3731 3023.9 0 3542.7 1929.4 0 6431.6 3031 0 2827.7 3179.1 0 6721.8 2477 0 3009.1 3822.9 0 3381.7 2822.6 0 6925.3 3731.1 0 3138.7 2535.7 0 4542.9 3289.2 0 3653 2959.7 0 3435.8 1890.9 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 196850000 158980000 37871000 0 NaN 4035 2226 2407 2407 428;4316 457;4601 492;4902 548;5446 492 548 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5219 492 548 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5219 4902 5446 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5376 Q9UQ35 2132 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 1 90.0897 5.3327E-07 153.25 144.3 153.25 1 S FSRPSMSPTPLDRCRSPGMLEPLGSSRTPMS X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX CRS(1)PGMLEPLGSSR CRS(90.09)PGMLEPLGS(-90.09)S(-97.27)R 3 3 -0.25292 45282 0 0 42431 0 0 52200 0 0 44694 0 0 23101 0 0 53500 0 0 23184 0 0 41320 0 0 46718 0 0 19093 0 0 42875 0 0 40096 0 0 51809 0 0 45894 0 0 25184 0 0 53116 0 0 24240 0 0 42494 0 0 45098 0 0 18935 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 270950000 270950000 0 0 NaN 4036 2226 2132 2132 618;4105 657;658;4377 700;701;4667 776;777;5182 701 777 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13172 701 777 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13172 701 777 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13172 Q9UQ35 1188 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 1 83.5558 1.56434E-07 148.04 127.84 148.04 1 S QEDATASPPRQKDKFSPFPVQDRPESSLVFK X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP DKFS(1)PFPVQDRPESSLVFK DKFS(83.56)PFPVQDRPES(-85.37)S(-83.56)LVFK 4 4 1.2613 8472.6 0 0 11564 0 0 9929.2 0 0 11627 0 0 5399.7 0 0 10632 0 0 5976.1 0 0 9427 0 0 10627 0 0 13125 0 0 8022.7 0 0 10925 0 0 9860 0 0 11918 0 0 5759.6 0 0 10711 0 0 6182.8 0 0 9898.1 0 0 10288 0 0 12577 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15042000 15042000 0 0 NaN 4037 2226 1188 1188 718 762 813 899 813 899 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20762 813 899 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20762 813 899 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20762 Q9UQ35 404 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 1 40.4823 0.0515878 40.482 27.282 40.482 2 S EPVNPPSEASPTRDRSPPKSPEKLPQSSSSE X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX DRS(1)PPKS(1)PEK DRS(40.48)PPKS(40.48)PEK 3 3 1.408 0 13968 0 0 13481 0 0 15135 0 0 14668 0 0 10433 0 0 15255 0 0 10007 0 0 12531 0 0 14791 0 0 3415.3 0 0 13221 0 0 12742 0 0 15115 0 0 14998 0 0 10863 0 0 15237 0 0 10338 0 0 12778 0 0 14391 0 0 3505.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 11682000 0 11682000 0 NaN 4038 2226 404 404 795 843 899 990 899 990 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7370 899 990 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7370 899 990 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7370 Q9UQ35 408 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 1 40.4823 0.0515878 40.482 27.282 40.482 2 S PPSEASPTRDRSPPKSPEKLPQSSSSESSPP X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX DRS(1)PPKS(1)PEK DRS(40.48)PPKS(40.48)PEK 7 3 1.408 0 13968 0 0 13481 0 0 15135 0 0 14668 0 0 10433 0 0 15255 0 0 10007 0 0 12531 0 0 14791 0 0 3415.3 0 0 13221 0 0 12742 0 0 15115 0 0 14998 0 0 10863 0 0 15237 0 0 10338 0 0 12778 0 0 14391 0 0 3505.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 11682000 0 11682000 0 NaN 4039 2226 408 408 795 843 899 990 899 990 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7370 899 990 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7370 899 990 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7370 Q9UQ35 454 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.96758 13.9226 0.00379425 100.04 65.364 100.04 2 S ESPKPAPAPGSHREISSSPTSKNRSHGRAKR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX EIS(0.968)S(0.106)S(0.673)PT(0.228)S(0.026)K EIS(13.92)S(-9.38)S(4.64)PT(-4.64)S(-14.19)K 3 2 0.51848 0 40337 0 0 39183 0 0 38060 0 0 37515 0 0 28288 0 0 38320 0 0 26103 0 0 35309 0 0 41755 0 0 14970 0 0 38161 0 0 37005 0 0 38331 0 0 38634 0 0 29267 0 0 38364 0 0 27105 0 0 35985 0 0 40536 0 0 14914 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 18560000 0 18560000 0 NaN 4040 2226 454 454 1000 1055;1056 1141 1258;1259 1141 1259 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9438 1141 1259 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9438 1141 1259 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9438 Q9UQ35 455 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.620379 2.66272 4.94292E-06 155.33 93.57 155.33 1 S SPKPAPAPGSHREISSSPTSKNRSHGRAKRD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX EIS(0.015)S(0.62)S(0.336)PT(0.028)SK EIS(-16.03)S(2.66)S(-2.66)PT(-13.45)S(-40.33)K 4 2 0.35554 49200 0 0 57316 0 0 50958 0 0 59926 0 0 39460 0 0 49871 0 0 36430 0 0 49576 0 0 64624 0 0 9822.8 0 0 46562 0 0 54159 0 0 51064 0 0 61210 0 0 40707 0 0 50452 0 0 38000 0 0 50035 0 0 62569 0 0 10397 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 52159000 52159000 0 0 NaN 4041 2226 455 455 1000 1055;1056 1142 1260 1142 1260 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9495 1142 1260 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9495 1142 1260 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9495 Q9UQ35 456 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.673258 4.63613 0.00379425 100.04 65.364 100.04 2 S PKPAPAPGSHREISSSPTSKNRSHGRAKRDK X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX EIS(0.968)S(0.106)S(0.673)PT(0.228)S(0.026)K EIS(13.92)S(-9.38)S(4.64)PT(-4.64)S(-14.19)K 5 2 0.51848 0 40337 0 0 39183 0 0 38060 0 0 37515 0 0 28288 0 0 38320 0 0 26103 0 0 35309 0 0 41755 0 0 14970 0 0 38161 0 0 37005 0 0 38331 0 0 38634 0 0 29267 0 0 38364 0 0 27105 0 0 35985 0 0 40536 0 0 14914 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 18560000 0 18560000 0 NaN 4042 2226 456 456 1000 1055;1056 1141 1258;1259 1141 1259 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9438 1141 1259 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9438 1141 1259 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9438 Q9UQ35 1320 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.999794 36.8549 2.20869E-23 280.08 243.78 280.08 1 S WGGPHFSPEHKELSNSPLRENSFGSPLEFRN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPX ELSNS(1)PLRENSFGSPLEFR ELS(-36.85)NS(36.85)PLRENS(-99.24)FGS(-141.04)PLEFR 5 3 0.076686 162040 0 0 114750 0 0 173660 0 0 120710 0 0 61886 0 0 160810 0 0 74693 0 0 115030 0 0 134750 0 0 23321 0 0 153370 0 0 108430 0 0 172860 0 0 124220 0 0 69639 0 0 158870 0 0 77061 0 0 117860 0 0 130410 0 0 24622 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 1113300000 1113300000 0 0 NaN 4043 2226 1320 1320 1048;1049 1104;1105 1192;1193 1311;1312 1193 1312 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19943 1193 1312 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19943 1193 1312 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19943 Q9UQ35 1329 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.999452 32.6126 7.6268E-05 129.15 98.256 129.15 1 S HKELSNSPLRENSFGSPLEFRNSGPLGTEMN X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX ENS(0.001)FGS(0.999)PLEFR ENS(-32.61)FGS(32.61)PLEFR 6 2 0.24602 22218 0 0 20087 0 0 22614 0 0 21969 0 0 15377 0 0 22624 0 0 14062 0 0 18770 0 0 23432 0 0 16799 0 0 21026 0 0 18987 0 0 22657 0 0 22453 0 0 16022 0 0 22631 0 0 14633 0 0 19483 0 0 22723 0 0 16253 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 56117000 56117000 0 0 NaN 4044 2226 1329 1329 1049;1078 1105;1136 1224 1346 1224 1346 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18437 1224 1346 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18437 1224 1346 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18437 Q9UQ35 1232 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.503873 0.674963 0.0323418 52.509 30.288 52.509 1 S GSSPETKEQNSALPTSSQDEELMEVVEKSEE X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPPPXXX EQNS(0.002)ALPT(0.063)S(0.504)S(0.431)QDEELMEVVEK EQNS(-25.19)ALPT(-9.01)S(0.67)S(-0.67)QDEELMEVVEK 9 3 1.0968 5476.4 0 0 5678 0 0 6022.9 0 0 5737.6 0 0 8490.6 0 0 5620.4 0 0 10169 0 0 9244.7 0 0 6746 0 0 41388 0 0 5184.1 0 0 5364.2 0 0 6066.7 0 0 5885.6 0 0 8491.1 0 0 5762.3 0 0 10177 0 0 10380 0 0 6801.5 0 0 39186 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11711000 11711000 0 0 NaN 4045 2226 1232 1232 1101 1159 1247 1371 1247 1371 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23019 1247 1371 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23019 1247 1371 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23019 Q9UQ35 1152 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.973526 15.697 8.62344E-08 149.16 128.42 149.16 1 S RFQSDSSSYPTVDSNSLLGQSRLETAESKEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPPPPXXXXXXXXX FQSDSSSYPTVDS(0.026)NS(0.974)LLGQSR FQS(-113.94)DS(-106.24)S(-101.13)S(-95.8)Y(-91.33)PT(-60.88)VDS(-15.7)NS(15.7)LLGQS(-35.87)R 15 3 -0.34014 4477 0 0 6096.7 0 0 4804.7 0 0 4746.6 0 0 4509.7 0 0 4483.8 0 0 5299.3 0 0 5579.6 0 0 5922.7 0 0 14673 0 0 4237.6 0 0 5751.6 0 0 4817.1 0 0 4951.9 0 0 4605.7 0 0 4547.4 0 0 5373.4 0 0 5996.4 0 0 5817.5 0 0 13945 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12890000 12890000 0 0 NaN 4046 2226 1152 1152 1308 1379 1485 1647 1485 1647 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17689 1485 1647 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17689 1485 1647 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17689 Q9UQ35 1124 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.999213 31.0363 0.000788045 100.69 62.394 100.69 1 S ASRSPIRQDRGEFSASPMLKSGMSPEQSRFQ X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Oxidation (M);X;X;X;X;Oxidation (M);Phospho (STY);X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX GEFS(0.001)AS(0.999)PMLK GEFS(-31.04)AS(31.04)PMLK 6 2 0.11723 56779 0 0 35602 0 0 52794 0 0 41096 0 0 24881 0 0 57979 0 0 28565 0 0 46408 0 0 39335 0 0 21330 0 0 53712 0 0 33663 0 0 53055 0 0 42132 0 0 26960 0 0 57256 0 0 29195 0 0 47642 0 0 38355 0 0 21159 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 316940000 316940000 0 0 NaN 4047 2226 1124 1124 1406 1482;1483 1591;1592 1759;1760 1592 1760 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17804 1592 1760 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17804 1592 1760 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17804 Q9UQ35 323 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.897893 9.80481 9.76359E-34 320.68 298.73 320.68 1 S APFSEPGTTSTQRPSSPETATKQPSSPYEDK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPXXXXXXXXX GEGDAPFSEPGTTSTQRPS(0.094)S(0.898)PET(0.008)ATK GEGDAPFS(-129.57)EPGT(-93.53)T(-79.67)S(-63.44)T(-56.58)QRPS(-9.8)S(9.8)PET(-20.44)AT(-41.01)K 20 3 0.003832 88078 0 0 95283 0 0 92782 0 0 96076 0 0 75884 0 0 93706 0 0 72722 0 0 97092 0 0 109200 0 0 29065 0 0 83362 0 0 90015 0 0 92943 0 0 98562 0 0 77995 0 0 94129 0 0 75175 0 0 98135 0 0 106200 0 0 29616 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 205800000 205800000 0 0 NaN 4048 2226 323 323 1407;3242 1484;3439 1593;3675 1761;1762;4078 1593 1762 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12391 1593 1762 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12391 1593 1762 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12391 Q9UQ35 1064 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.848864 7.52832 0.0209319 56.951 40.419 56.951 1 S YFGVSSLQLKGQSQTSPDHRSDTSSPEVRQS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX GQS(0.001)QT(0.15)S(0.849)PDHR GQS(-28.62)QT(-7.53)S(7.53)PDHR 6 3 0.32561 283.18 0 0 0 0 0 0 0 0 0 0 0 278.72 0 0 219.98 0 0 0 0 0 0 0 0 339.42 0 0 1376.6 0 0 266.9 0 0 0 0 0 0 0 0 0 0 0 262.77 0 0 210.51 0 0 0 0 0 0 0 0 320.51 0 0 1296.2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 377100 377100 0 0 NaN 4049 2226 1064 1064 1580 1665 1800 2001 1800 2001 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4234 1800 2001 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4234 1800 2001 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4234 Q9UQ35 377 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.999387 32.5635 9.31514E-18 232.07 209.09 137.12 2 S EPPAPTPLLAERHGGSPQPLATTPLSQEPVN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP HGGS(0.999)PQPLAT(0.001)TPLSQEPVNPPS(0.006)EAS(0.786)PT(0.207)R HGGS(32.56)PQPLAT(-32.56)T(-44.79)PLS(-64.05)QEPVNPPS(-20.88)EAS(5.79)PT(-5.79)R 4 4 -0.19375 0 11892 0 0 15003 0 0 13105 0 0 14698 0 0 10728 0 0 12339 0 0 11338 0 0 14967 0 0 16787 0 0 26431 0 0 11257 0 0 14171 0 0 13098 0 0 15073 0 0 11041 0 0 12556 0 0 11661 0 0 15708 0 0 16333 0 0 25235 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 362720000 0 362720000 0 NaN 4050 2226 377 377 1711 1804;1805 1949;1950 2173;2174 1949 2173 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15271 1950 2174 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15462 1950 2174 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15462 Q9UQ35 398 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.897597 9.48096 9.31514E-18 232.07 209.09 232.07 1;2 S TTPLSQEPVNPPSEASPTRDRSPPKSPEKLP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX HGGS(0.998)PQPLAT(0.002)TPLSQEPVNPPS(0.001)EAS(0.898)PT(0.101)R HGGS(28.02)PQPLAT(-28.02)T(-45.97)PLS(-108.5)QEPVNPPS(-28.6)EAS(9.48)PT(-9.48)R 25 3 0.14214 3098.6 11892 0 3266.3 15003 0 2921.6 13105 0 3018 14698 0 2380.8 10728 0 3936.3 12339 0 3818.2 11338 0 3910.3 14967 0 2852.4 16787 0 5870.4 26431 0 2931.5 11257 0 3084.1 14171 0 2948.1 13098 0 3128.7 15073 0 2467.4 11041 0 3915.3 12556 0 3791.1 11661 0 4100.2 15708 0 2855.4 16333 0 5618.2 25235 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 390550000 27830000 362720000 0 NaN 4051 2226 398 398 1711 1804;1805 1948;1949;1950 2172;2173;2174 1950 2174 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15462 1950 2174 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15462 1950 2174 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15462 Q9UQ35 220 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.998939 29.7383 1.08254E-05 155.86 55.17 155.86 1 S PRRERKKSSKKKKHRSESESKKRKHRSPTPK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX HRS(0.999)ES(0.001)ESK HRS(29.74)ES(-29.74)ES(-68.19)K 3 3 0.95804 4178.5 0 0 8741.2 0 0 5312.7 0 0 7037 0 0 3819.3 0 0 6241.6 0 0 6240.4 0 0 7440.3 0 0 7951.2 0 0 1858.8 0 0 3958.2 0 0 8247.8 0 0 5270.7 0 0 7316.6 0 0 3999.9 0 0 6310.3 0 0 6282.8 0 0 7472.8 0 0 7772.9 0 0 1922.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8039200 8039200 0 0 NaN 4052 2226 220 220 1742 1837 1983 2210 1983 2210 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4709 1983 2210 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4709 1983 2210 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4709 Q9UQ35 231 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 1 62.3026 0.005876 88.392 48.39 62.303 1;2 S KKHRSESESKKRKHRSPTPKSKRKSKDKKRK X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX HRS(1)PT(1)PK HRS(62.3)PT(62.3)PK 3 3 -0.21194 8734.7 5401.6 0 9382.7 5225.3 0 8697.9 5070 0 9666.7 5665.1 0 10461 5130.3 0 8012.5 5736.8 0 12271 3900.6 0 10965 4732.9 0 10102 6982.1 0 3543.7 2545 0 8265.1 5110.1 0 8865.1 4938.6 0 8785.4 5122.7 0 9881.6 5791.1 0 10535 5188.2 0 8148.9 5739.3 0 12344 4113.9 0 10991 4863 0 10059 6758.5 0 3590.6 2505.9 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 14396000 9201300 5194900 0 NaN 4053 2226 231 231 1744 1839;1840 1985;1986 2212;2213 1986 2213 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5088 1985 2212 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4999 1985 2212 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4999 Q9UQ35 1463 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.983817 17.9084 0.000166361 103.43 88.043 103.43 1 S RDGSGTPSRHSLSGSSPGMKDIPRTPSRGRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Oxidation (M);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX HSLSGS(0.016)S(0.984)PGMK HS(-52.3)LS(-35.91)GS(-17.91)S(17.91)PGMK 7 3 0.42401 26435 0 0 23554 0 0 24938 0 0 21396 0 0 17834 0 0 29956 0 0 20586 0 0 28453 0 0 21583 0 0 4994.8 0 0 25008 0 0 22238 0 0 25115 0 0 22238 0 0 18557 0 0 29635 0 0 20849 0 0 28749 0 0 21254 0 0 5361.7 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 47029000 47029000 0 0 NaN 4054 2226 1463 1463 1748 1844;1845 1990;1991 2218;2219 1991 2219 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8933 1991 2219 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8933 1991 2219 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8933 Q9UQ35 2688 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.9985 28.2323 0.0124794 76.759 55.7 76.759 1 S RRSRSPRKPIDSLRDSRSLSYSPVERRRPSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXPPPPPPPPPPXXXXXXXXXXXXXX KPIDS(0.002)LRDS(0.998)R KPIDS(-28.23)LRDS(28.23)R 9 3 0.030011 61850 0 0 25058 0 0 70953 0 0 26444 0 0 38433 0 0 61688 0 0 51887 0 0 41941 0 0 29555 0 0 1855 0 0 58560 0 0 23679 0 0 70549 0 0 27634 0 0 41091 0 0 60015 0 0 51559 0 0 42891 0 0 30109 0 0 2717.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 199020000 199020000 0 0 NaN 4055 2226 2688 2688 2155 2277 2451 2729 2451 2729 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10020 2451 2729 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10020 2451 2729 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10020 Q9UQ35 1179 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.99957 33.66 3.12374E-16 239.64 218.11 239.64 1 S SKEKMALPPQEDATASPPRQKDKFSPFPVQD X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPXXXXXXXXXX MALPPQEDATAS(1)PPR MALPPQEDAT(-33.66)AS(33.66)PPR 12 3 -0.027308 132870 0 0 131030 0 0 142540 0 0 127580 0 0 134290 0 0 143320 0 0 133130 0 0 133260 0 0 137600 0 0 87889 0 0 125770 0 0 123760 0 0 142870 0 0 131460 0 0 136750 0 0 142990 0 0 135700 0 0 136710 0 0 135580 0 0 85842 0 0 9 0 0 9 0 0 9 0 0 9 0 0 9 0 0 9 0 0 9 0 0 9 0 0 9 0 0 9 0 0 189900000 189900000 0 0 NaN 4056 2226 1179 1179 2662;2663 2810;2811;2812 3013;3014;3015;3016 3352;3353;3354;3355;3356;3357;3358;3359;3360;3361 3015 3356 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14361 3015 3356 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14361 3015 3356 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14361 Q9UQ35 2382 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.982591 17.5364 0.000240857 110.06 84.476 110.06 1 S TSARMAPALSGANLTSPRVPLSAYERVSGRT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY) XXXXPPPPPPPPPPPPPPXXXXXXXXXXXXX MAPALSGANLT(0.017)S(0.983)PR MAPALS(-40.81)GANLT(-17.54)S(17.54)PR 12 2 -0.69489 33379 0 0 24970 0 0 34183 0 0 24621 0 0 16004 0 0 32040 0 0 14722 0 0 27190 0 0 27635 0 0 38932 0 0 31588 0 0 23586 0 0 34149 0 0 25420 0 0 17308 0 0 31797 0 0 15401 0 0 28634 0 0 26720 0 0 37289 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 33703000 33703000 0 0 NaN 4057 2226 2382 2382 2665 2815 3020 3365 3020 3365 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16305 3020 3365 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16305 3020 3365 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16305 Q9UQ35 2449 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.999789 36.7968 4.17857E-06 137.44 122.55 83.541 1 S APSQSLLPPAQDQPRSPVPSAFSDQSRCLIA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPXXXX S(1)PVPSAFSDQSR S(36.8)PVPS(-36.8)AFS(-57.43)DQS(-65.17)R 1 2 0.57927 41485 0 0 49276 0 0 41487 0 0 54261 0 0 31740 0 0 42742 0 0 33651 0 0 44857 0 0 52835 0 0 67781 0 0 39255 0 0 46578 0 0 41659 0 0 55224 0 0 32831 0 0 43511 0 0 34688 0 0 46956 0 0 51319 0 0 64862 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 372820000 372820000 0 0 NaN 4058 2226 2449 2449 2702;4208 2863;2864;4485 3071;3072;3073;4779 3417;3418;3419;3420;5305 4779 5305 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12551 3073 3420 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17533 3073 3420 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17533 Q9UQ35 2123 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.985451 18.3383 2.94644E-08 174.2 138.87 174.2 1 S ALNSSRMSCFSRPSMSPTPLDRCRSPGMLEP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;Oxidation (M);X;X;X XXXXXXPPPPPPPPPPPPPPPPXXXXXXXXX MSCFSRPSMS(0.985)PT(0.014)PLDR MS(-94.63)CFS(-73.03)RPS(-39.89)MS(18.34)PT(-18.34)PLDR 10 3 -1.327 56919 0 0 51606 0 0 55456 0 0 53092 0 0 30759 0 0 58416 0 0 32014 0 0 49653 0 0 54911 0 0 19168 0 0 53854 0 0 48759 0 0 55625 0 0 54508 0 0 32712 0 0 58241 0 0 33154 0 0 50723 0 0 53210 0 0 19198 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 160600000 160600000 0 0 NaN 4059 2226 2123 2123 2740;2986 2906;3165 3116;3388 3463;3758 3116 3463 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16014 3116 3463 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16014 3116 3463 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16014 Q9UQ35 2102 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.766307 3.04038 0.0392736 58.758 48.553 58.758 2 S RSRSATPPATRNHSGSRTPPVALNSSRMSCF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPXXXX NHS(0.529)GS(0.766)RT(0.704)PPVALNSSR NHS(-2.01)GS(3.04)RT(2.01)PPVALNS(-34.88)S(-38.35)R 5 3 -2.1226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4060 2226 2102 2102 2823 2993 3206 3559 3206 3559 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7468 3206 3559 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7468 3206 3559 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7468 Q9UQ35 857 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.877385 8.70996 1.30168E-07 156.58 134.15 156.58 1;2 S PKVKSGTPPRQGSITSPQANEQSVTPQRRSC X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPXX QGS(0.004)IT(0.118)S(0.877)PQANEQS(0.029)VT(0.971)PQRR QGS(-23.14)IT(-8.71)S(8.71)PQANEQS(-15.3)VT(15.3)PQRR 6 3 0.065794 8898.2 22612 0 7265.8 22514 0 8527.9 23866 0 9069.8 21122 0 7470.5 14330 0 8100.8 23641 0 7882.4 12610 0 9063.2 20920 0 8053.5 21334 0 5784.1 3754.8 0 8418.6 21402 0 6874 21260 0 8596.2 23839 0 9186.9 21813 0 7649.5 15089 0 8186.1 23557 0 8008.5 13158 0 9228.1 21203 0 7939.1 20681 0 5656.2 4019.7 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 181070000 13324000 167740000 0 NaN 4061 2226 857 857 3038;3039;3826;3827 3220;3221;3222;4078;4079;4080 3444;3446;3447 3817;3819;3820 3446 3819 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8413 3446 3819 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8413 3446 3819 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8413 Q9UQ35 864 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.732837 3.45861 0.0113232 70.062 53.125 70.062 3 S PPRQGSITSPQANEQSVTPQRRSCFESSPDP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X PPPPPPPPPPPPPPPPPPPPPPXXXXXXXXX S(0.12)GT(0.559)PPRQGS(0.217)IT(0.126)S(0.297)PQANEQS(0.733)VT(0.948)PQRR S(-7.1)GT(2.67)PPRQGS(-2.67)IT(-6.86)S(-3.46)PQANEQS(3.46)VT(10.6)PQRR 19 3 0.85262 0 0 4833.9 0 0 4703.3 0 0 4943.9 0 0 4354.9 0 0 2808.8 0 0 5045.7 0 0 3510.8 0 0 3959.6 0 0 4526.4 0 0 521.91 0 0 4574.5 0 0 4441 0 0 4947.1 0 0 4503.8 0 0 2987.4 0 0 5014.1 0 0 3567.8 0 0 4029.6 0 0 4423.2 0 0 583.08 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 30023000 0 0 30023000 NaN 4062 2226 864 864 3038;3039;3826;3827 3220;3221;3222;4078;4079;4080 4353 4837 4353 4837 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8333 4353 4837 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8333 4353 4837 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8333 Q9UQ35 333 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.915986 10.3754 0.00149171 99.732 66.323 99.732 1 S TQRPSSPETATKQPSSPYEDKDKDKKEKSAT X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX QPS(0.084)S(0.916)PYEDK QPS(-10.38)S(10.38)PY(-64.12)EDK 4 2 1.4068 18684 0 0 21503 0 0 18106 0 0 19492 0 0 14927 0 0 19433 0 0 16516 0 0 18517 0 0 22345 0 0 10272 0 0 17678 0 0 20302 0 0 18229 0 0 20136 0 0 15364 0 0 19489 0 0 16896 0 0 18919 0 0 21801 0 0 10101 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9022200 9022200 0 0 NaN 4063 2226 333 333 3106 3294 3524 3907 3524 3907 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9397 3524 3907 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9397 3524 3907 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9397 Q9UQ35 1083 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.999535 33.435 4.11363E-12 211.43 171.65 211.43 1 S RSDTSSPEVRQSHSESPSLQSKSQTSPKGGR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX QSHSES(1)PSLQSK QS(-52.04)HS(-33.43)ES(33.43)PS(-52.39)LQS(-143.17)K 6 3 0.40761 26637 0 0 30793 0 0 31534 0 0 30705 0 0 22931 0 0 34671 0 0 29077 0 0 32949 0 0 35016 0 0 3397.6 0 0 25224 0 0 29088 0 0 31378 0 0 31596 0 0 23871 0 0 34560 0 0 29466 0 0 33219 0 0 34298 0 0 3961.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 386360000 386360000 0 0 NaN 4064 2226 1083 1083 3138 3329 3560 3945 3560 3945 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7592 3560 3945 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7592 3560 3945 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7592 Q9UQ35 994 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.992955 21.5193 2.00319E-05 133.86 86.569 133.86 1 S VKPETPPRQSHSGSISPYPKVKAQTPPGPSL X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX QSHSGS(0.007)IS(0.993)PYPK QS(-63.45)HS(-43.3)GS(-21.52)IS(21.52)PY(-78.13)PK 8 3 0.37488 35601 0 0 38648 0 0 36634 0 0 38286 0 0 20314 0 0 41741 0 0 24038 0 0 35563 0 0 39927 0 0 15026 0 0 33692 0 0 36508 0 0 36636 0 0 39389 0 0 21646 0 0 41636 0 0 24725 0 0 36365 0 0 38722 0 0 14972 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 93139000 93139000 0 0 NaN 4065 2226 994 994 3139 3330 3561 3946;3947 3561 3946 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9603 3561 3946 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9603 3561 3946 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9603 Q9UQ35 1672 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.89151 6.54332 0.013612 65.374 37.965 65.374 2 S SSPEHPPKSRTARRGSRSSPEPKTKSRTPPR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX RGS(0.892)RS(0.598)S(0.511)PEPK RGS(6.54)RS(0.85)S(-0.85)PEPK 3 3 0.027156 0 19278 0 0 16937 0 0 16629 0 0 16146 0 0 11395 0 0 19757 0 0 13580 0 0 16590 0 0 18189 0 0 5156.6 0 0 18232 0 0 15995 0 0 16836 0 0 16685 0 0 11908 0 0 19613 0 0 13844 0 0 16919 0 0 17751 0 0 5239.5 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 50802000 0 50802000 0 NaN 4066 2226 1672 1672 3259 3457 3693 4097;4098 3693 4097 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5620 3693 4097 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5620 3693 4097 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5620 Q9UQ35 1674 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.597954 0.854444 0.013612 65.374 37.965 65.374 2 S PEHPPKSRTARRGSRSSPEPKTKSRTPPRRR X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX RGS(0.892)RS(0.598)S(0.511)PEPK RGS(6.54)RS(0.85)S(-0.85)PEPK 5 3 0.027156 0 19278 0 0 16937 0 0 16629 0 0 16146 0 0 11395 0 0 19757 0 0 13580 0 0 16590 0 0 18189 0 0 5156.6 0 0 18232 0 0 15995 0 0 16836 0 0 16685 0 0 11908 0 0 19613 0 0 13844 0 0 16919 0 0 17751 0 0 5239.5 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 50802000 0 50802000 0 NaN 4067 2226 1674 1674 3259 3457 3693 4097;4098 3693 4097 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5620 3693 4097 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5620 3693 4097 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5620 Q9UQ35 2702 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 1 71.3538 0.000344664 109 73.486 71.354 1;2 S DSRSLSYSPVERRRPSPQPSPRDQQSSSSER X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX RRPS(1)PQPS(1)PR RRPS(71.35)PQPS(71.35)PR 4 3 -0.029556 6865.3 9650.2 0 11131 2721.9 0 8251.9 8350.2 0 11084 3777.2 0 6170.2 5969 0 8098.6 8207.3 0 7443.7 5564 0 8717.6 6589.2 0 10724 3253.9 0 9755.1 6516.6 0 6501.6 9126.6 0 10515 2577.3 0 8206.3 8453 0 11335 3885.1 0 6405.6 6190.1 0 8277 8020.8 0 7605.7 5619.9 0 9014.3 6868.5 0 10442 3308.6 0 9387.4 6288.6 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 79300000 67992000 11309000 0 NaN 4068 2226 2702 2702 3409;3440 3621;3653;3654 3862;3895;3896 4287;4323;4324;4325 3896 4324 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4963 3895 4323 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4817 3895 4323 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4817 Q9UQ35 2706 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 1 71.3538 0.0114038 71.354 35.494 71.354 2 S LSYSPVERRRPSPQPSPRDQQSSSSERGSRR X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX RRPS(1)PQPS(1)PR RRPS(71.35)PQPS(71.35)PR 8 3 -0.029556 0 9650.2 0 0 2721.9 0 0 8350.2 0 0 3777.2 0 0 5969 0 0 8207.3 0 0 5564 0 0 6589.2 0 0 3253.9 0 0 6516.6 0 0 9126.6 0 0 2577.3 0 0 8453 0 0 3885.1 0 0 6190.1 0 0 8020.8 0 0 5619.9 0 0 6868.5 0 0 3308.6 0 0 6288.6 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 11309000 0 11309000 0 NaN 4069 2226 2706 2706 3409;3440 3621;3653;3654 3896 4324;4325 3896 4324 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4963 3896 4324 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4963 3896 4324 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4963 Q9UQ35 1691 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.835376 7.09869 0.0133819 66.826 41.505 66.826 2 S PEPKTKSRTPPRRRSSRSSPELTRKARLSRR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX S(0.164)S(0.835)RS(0.215)S(0.768)PELT(0.017)RK S(-7.1)S(7.1)RS(-5.56)S(5.56)PELT(-16.65)RK 2 3 0.27913 0 41527 0 0 33479 0 0 41563 0 0 35149 0 0 33167 0 0 40679 0 0 30333 0 0 33737 0 0 34875 0 0 8513.9 0 0 39295 0 0 31636 0 0 41741 0 0 36077 0 0 34118 0 0 40457 0 0 31137 0 0 34366 0 0 34218 0 0 8797.7 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 38273000 0 38273000 0 NaN 4070 2226 1691 1691 3506;4410 3723;4698 3969;5002 4407;5549;5550 5002 5550 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7824 5002 5550 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7824 5002 5550 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7824 Q9UQ35 1693 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.517356 0.519756 0.0373558 50.079 36.173 50.079 2 S PKTKSRTPPRRRSSRSSPELTRKARLSRRSR X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX RS(0.481)S(0.539)RS(0.517)S(0.46)PELT(0.003)R RS(-0.52)S(0.52)RS(0.52)S(-0.52)PELT(-21.87)R 5 3 3.603 0 6374.9 0 0 5844.6 0 0 5364.8 0 0 5708.1 0 0 4044.9 0 0 5846.9 0 0 5925.1 0 0 5270.6 0 0 5150.6 0 0 2272.8 0 0 6028.5 0 0 5520.4 0 0 5447.5 0 0 5871.5 0 0 4208.5 0 0 5851.5 0 0 5919.7 0 0 5377.6 0 0 5114.9 0 0 2262.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 9317000 0 9317000 0 NaN 4071 2226 1693 1693 3506;4376;4410 3723;4662;4698 3969 4407 3969 4407 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5673 3969 4407 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5673 3969 4407 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5673 Q9UQ35 1694 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.768468 5.56163 0.0111302 86.332 51.037 66.826 1;2 S KTKSRTPPRRRSSRSSPELTRKARLSRRSRS X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX S(0.164)S(0.835)RS(0.215)S(0.768)PELT(0.017)RK S(-7.1)S(7.1)RS(-5.56)S(5.56)PELT(-16.65)RK 5 3 0.27913 12207 35152 0 10995 27635 0 9408.7 36198 0 11914 29441 0 8793.1 29122 0 11541 34833 0 7719 24408 0 8720 28466 0 11718 29724 0 2359 6241.2 0 11540 33267 0 10392 26116 0 9625.3 36294 0 12171 30205 0 8948.2 29909 0 11554 34606 0 8018.3 25217 0 8927.2 28989 0 11392 29103 0 2423.1 6535.6 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 44386000 15430000 28956000 0 NaN 4072 2226 1694 1694 3506;4376;4410 3723;4662;4698 4966;5002 5511;5549;5550 5002 5550 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7824 4966 5511 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7410 4966 5511 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7410 Q9UQ35 2581 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.926022 10.9752 0.000119989 124.51 89.101 124.51 1 S SSLPVQPEVALKRVPSPTPAPKEAVREGRPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX RVPS(0.926)PT(0.074)PAPK RVPS(10.98)PT(-10.98)PAPK 4 3 0.4438 70311 0 0 68278 0 0 71149 0 0 66476 0 0 45435 0 0 68289 0 0 51439 0 0 57702 0 0 68099 0 0 2603.8 0 0 66535 0 0 64490 0 0 71291 0 0 68394 0 0 47726 0 0 68241 0 0 52528 0 0 58368 0 0 66487 0 0 3787.2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 1077800000 1077800000 0 0 NaN 4073 2226 2581 2581 3550;5213 3768;5557 4014;5921 4455;6579 4014 4455 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9231 4014 4455 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9231 4014 4455 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9231 Q9UQ35 351 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.516573 2.91087 0.0407342 46.319 31.346 46.319 2 S EDKDKDKKEKSATRPSPSPERSSTGPEPPAP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX S(0.228)AT(0.27)RPS(0.517)PS(0.985)PER S(-3.67)AT(-2.91)RPS(2.91)PS(19.29)PER 6 3 -0.84471 0 2863.4 0 0 3088.8 0 0 4098.8 0 0 4249.4 0 0 4069.1 0 0 4056.6 0 0 2924.7 0 0 3675.7 0 0 3869.5 0 0 3078.3 0 0 2714.1 0 0 2924.5 0 0 4053.7 0 0 4289.2 0 0 4115.8 0 0 4075.7 0 0 3057.9 0 0 3794.5 0 0 3778 0 0 2983.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 5488700 0 5488700 0 NaN 4074 2226 351 351 3634 3863;3864 4118 4575 4118 4575 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5492 4118 4575 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5492 4118 4575 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5492 Q9UQ35 353 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.984856 19.2896 0.0127707 63.29 46.071 46.319 1;2 S KDKDKKEKSATRPSPSPERSSTGPEPPAPTP X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX S(0.228)AT(0.27)RPS(0.517)PS(0.985)PER S(-3.67)AT(-2.91)RPS(2.91)PS(19.29)PER 8 3 -0.84471 5646.7 2863.4 0 4226.5 3088.8 0 4573.8 4098.8 0 4657 4249.4 0 4076.6 4069.1 0 4520.5 4056.6 0 4165.5 2924.7 0 5124.3 3675.7 0 4709.8 3869.5 0 2169.1 3078.3 0 5339.2 2714.1 0 3995.1 2924.5 0 4661.3 4053.7 0 4753.2 4289.2 0 4168.1 4115.8 0 4548.8 4075.7 0 4250.8 3057.9 0 5182 3794.5 0 4624.1 3778 0 2161.1 2983.7 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 11053000 5563900 5488700 0 NaN 4075 2226 353 353 3634 3863;3864 4117;4118 4574;4575 4118 4575 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5492 4117 4574 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5348 4117 4574 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5348 Q9UQ35 876 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.854672 7.69565 2.96259E-07 148.52 108.45 148.52 1 S NEQSVTPQRRSCFESSPDPELKSRTPSRHSC X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX SCFES(0.145)S(0.855)PDPELK S(-43.49)CFES(-7.7)S(7.7)PDPELK 6 3 -0.78136 39397 0 0 47896 0 0 42281 0 0 44991 0 0 25410 0 0 41872 0 0 31765 0 0 37299 0 0 47515 0 0 9242.5 0 0 37291 0 0 45230 0 0 42214 0 0 46323 0 0 26887 0 0 42069 0 0 32460 0 0 37869 0 0 46215 0 0 9566.2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 325370000 325370000 0 0 NaN 4076 2226 876 876 3639 3869 4123 4580;4581 4123 4580 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14980 4123 4580 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14980 4123 4580 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14980 Q9UQ35 1483 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.959077 13.6989 1.46626E-09 188.27 151.95 188.27 1 S DIPRTPSRGRSECDSSPEPKALPQTPRPRSR X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX SECDS(0.041)S(0.959)PEPK S(-67.64)ECDS(-13.7)S(13.7)PEPK 6 2 -0.20536 25066 0 0 17078 0 0 26958 0 0 17163 0 0 9210.6 0 0 25490 0 0 8650.8 0 0 17533 0 0 18401 0 0 2962.2 0 0 23726 0 0 16134 0 0 26818 0 0 17751 0 0 10396 0 0 25084 0 0 9099.6 0 0 17984 0 0 17743 0 0 3195 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12702000 12702000 0 0 NaN 4077 2226 1483 1483 3680 3915 4175 4641 4175 4641 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7287 4175 4641 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7287 4175 4641 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7287 Q9UQ35 1219 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.925014 10.9135 1.5835E-14 236.7 171.79 236.7 1 S DTLRTPPRERSGAGSSPETKEQNSALPTSSQ X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX SGAGS(0.075)S(0.925)PETK S(-89.08)GAGS(-10.91)S(10.91)PET(-44.75)K 6 2 0.056819 76355 0 0 75389 0 0 74603 0 0 75084 0 0 38328 0 0 72734 0 0 43499 0 0 65956 0 0 78039 0 0 2197.2 0 0 72245 0 0 71216 0 0 74787 0 0 77075 0 0 41143 0 0 72929 0 0 44976 0 0 66488 0 0 75536 0 0 3595.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 267930000 267930000 0 0 NaN 4078 2226 1219 1219 3771 4012 4277 4752 4277 4752 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6598 4277 4752 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6598 4277 4752 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6598 Q9UQ35 1132 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.985113 18.2071 4.41621E-06 157.54 109.98 89.731 1 S DRGEFSASPMLKSGMSPEQSRFQSDSSSYPT X;X;X;X;X;X;X;Phospho (STY);X;Oxidation (M);X;X;X;X;Oxidation (M);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX S(0.015)GMS(0.985)PEQSR S(-18.21)GMS(18.21)PEQS(-59.8)R 4 2 -0.32639 23282 0 0 21399 0 0 21900 0 0 22100 0 0 15702 0 0 20487 0 0 17771 0 0 22338 0 0 22004 0 0 7483.2 0 0 22026 0 0 20219 0 0 22060 0 0 22623 0 0 16334 0 0 20645 0 0 18106 0 0 22560 0 0 21532 0 0 7563.3 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 69147000 69147000 0 0 NaN 4079 2226 1132 1132 3792 4039;4040 4308;4309 4787;4788 4308 4787 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4840 4309 4788 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6405 4309 4788 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6405 Q9UQ35 1600 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.49812 0 0.000726723 121.93 68.526 121.93 S VDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX S(0.004)GS(0.498)S(0.498)PEVK S(-21.22)GS(0)S(0)PEVK 3 2 -0.75593 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4080 2226 1600 1600 3815 4065 4337 4819 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8004 4337 4819 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8004 4337 4819 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8004 Q9UQ35 1601 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.49812 0 0.000726723 121.93 68.526 121.93 S DSKSRLSPRRSRSGSSPEVKDKPRAAPRAQS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.004)GS(0.498)S(0.498)PEVK S(-21.22)GS(0)S(0)PEVK 4 2 -0.75593 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4081 2226 1601 1601 3815 4065 4337 4819 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8004 4337 4819 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8004 4337 4819 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8004 Q9UQ35 1542 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.828948 9.23653 1.88649E-07 148.09 125.77 122.04 1;2 S TVARTPLGQRSRSGSSQELDVKPSASPQERS X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPX S(0.072)GS(0.099)S(0.829)QELDVKPS(0.014)AS(0.986)PQER S(-10.61)GS(-9.24)S(9.24)QELDVKPS(-18.41)AS(18.41)PQER 4 3 0.68501 32623 16724 0 20969 11643 0 31280 17380 0 23870 12483 0 26469 10888 0 34951 16589 0 26532 10727 0 28677 13145 0 23869 11919 0 9175 18183 0 30865 15828 0 19825 11004 0 31516 17383 0 24510 12832 0 27143 11431 0 34477 16436 0 26931 10959 0 29285 13867 0 23664 11710 0 9303.1 17426 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 57639000 44215000 13424000 0 NaN 4082 2226 1542 1542 3816 4066;4067 4339;4340 4821;4822 4340 4822 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11943 4339 4821 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11138 4339 4821 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11138 Q9UQ35 1552 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.985557 18.4052 3.53573E-05 122.04 86.648 122.04 1;2 S SRSGSSQELDVKPSASPQERSESDSSPDSKA X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPXXXXXXXXXXX S(0.072)GS(0.099)S(0.829)QELDVKPS(0.014)AS(0.986)PQER S(-10.61)GS(-9.24)S(9.24)QELDVKPS(-18.41)AS(18.41)PQER 14 3 0.68501 20513 16724 0 21271 11643 0 21266 17380 0 21218 12483 0 21334 10888 0 22362 16589 0 20237 10727 0 21913 13145 0 20678 11919 0 13312 18183 0 19414 15828 0 20093 11004 0 21369 17383 0 21808 12832 0 21631 11431 0 22383 16436 0 20665 10959 0 22399 13867 0 20384 11710 0 13042 17426 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 26563000 13139000 13424000 0 NaN 4083 2226 1552 1552 3816 4066;4067 4338;4340 4820;4822 4340 4822 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11943 4340 4822 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11943 4340 4822 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11943 Q9UQ35 778 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.999823 37.5257 3.36956E-09 193 156.7 193 1;2 S SSPRSKAKSRLSLRRSLSGSSPCPKQKSQTP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPXXXXXX S(1)LSGS(0.078)S(0.922)PCPK S(37.53)LS(-37.53)GS(-10.75)S(10.75)PCPK 1 2 -0.72935 157050 32816 0 131300 33102 0 168810 35229 0 134770 31560 0 143760 23506 0 173370 35402 0 143830 23663 0 165660 32361 0 138570 35514 0 51305 6731.9 0 148650 31062 0 124060 31261 0 169000 35191 0 138790 32561 0 147370 24560 0 172060 35288 0 146260 24404 0 168020 32781 0 136950 34539 0 52144 7087.8 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 218470000 127490000 90982000 0 NaN 4084 2226 778 778 3985 4248;4249 4534;4536 5041;5044 4536 5044 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10556 4536 5044 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10556 4536 5044 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10556 Q9UQ35 780 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.746621 4.8872 1.31558E-06 163.83 135.02 163.83 1 S PRSKAKSRLSLRRSLSGSSPCPKQKSQTPPR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX S(0.011)LS(0.747)GS(0.242)SPCPK S(-18.42)LS(4.89)GS(-4.89)S(-33.6)PCPK 3 2 -1.0787 82988 0 0 93450 0 0 85662 0 0 88394 0 0 114660 0 0 90213 0 0 111890 0 0 101580 0 0 96767 0 0 96554 0 0 78538 0 0 88250 0 0 86453 0 0 91098 0 0 114590 0 0 90668 0 0 113610 0 0 104360 0 0 96121 0 0 93268 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 51823000 51823000 0 0 NaN 4085 2226 780 780 3985 4248;4249 4535 5042;5043 4535 5042 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10486 4535 5042 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10486 4535 5042 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10486 Q9UQ35 783 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.950727 12.8989 3.36956E-09 193 156.7 85.821 1;2 S KAKSRLSLRRSLSGSSPCPKQKSQTPPRRSR X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX SLSGS(0.049)S(0.951)PCPK S(-60.21)LS(-32.79)GS(-12.9)S(12.9)PCPK 6 2 0.97642 33692 32816 0 37597 33102 0 36855 35229 0 40357 31560 0 26481 23506 0 37636 35402 0 28062 23663 0 38466 32361 0 39552 35514 0 93475 6731.9 0 31893 31062 0 35533 31261 0 36805 35191 0 41225 32561 0 27519 24560 0 38032 35288 0 28803 24404 0 41368 32781 0 38539 34539 0 88908 7087.8 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 122100000 31120000 90982000 0 NaN 4086 2226 783 783 3985 4248;4249 4533;4536 5040;5044 4533 5040 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9968 4536 5044 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10556 4536 5044 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10556 Q9UQ35 2694 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.99912 30.9778 2.91594E-06 163.83 106.28 163.83 1 S RKPIDSLRDSRSLSYSPVERRRPSPQPSPRD X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX SLS(0.001)YS(0.999)PVER S(-40.85)LS(-30.98)Y(-70.56)S(30.98)PVER 5 2 -0.38751 51511 0 0 57569 0 0 45261 0 0 53805 0 0 21050 0 0 59125 0 0 20513 0 0 46547 0 0 59201 0 0 6455.4 0 0 48719 0 0 54362 0 0 45638 0 0 55561 0 0 22820 0 0 58881 0 0 21966 0 0 47372 0 0 56773 0 0 7155.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 86957000 86957000 0 0 NaN 4087 2226 2694 2694 4010 4275 4563 5071 4563 5071 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12705 4563 5071 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12705 4563 5071 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12705 Q9UQ35 2067 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.858381 7.70722 0.0514605 45.654 23.012 45.654 2 S RRSRSRTPRTARGKRSLTRSPPAIRRRSASG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPXXXXXX S(0.858)LT(0.165)RS(0.977)PPAIR S(7.71)LT(-7.71)RS(15.59)PPAIR 1 2 -0.39917 0 17800 0 0 14581 0 0 17566 0 0 15276 0 0 15242 0 0 17748 0 0 15079 0 0 15435 0 0 14525 0 0 12888 0 0 16842 0 0 13778 0 0 17673 0 0 15683 0 0 15602 0 0 17674 0 0 15342 0 0 15961 0 0 14355 0 0 12493 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 21252000 0 21252000 0 NaN 4088 2226 2067 2067 4014 4280 4568 5076 4568 5076 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11529 4568 5076 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11529 4568 5076 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11529 Q9UQ35 2071 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.976918 15.5857 0.0514605 45.654 23.012 45.654 2 S SRTPRTARGKRSLTRSPPAIRRRSASGSSSD X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX S(0.858)LT(0.165)RS(0.977)PPAIR S(7.71)LT(-7.71)RS(15.59)PPAIR 5 2 -0.39917 0 17800 0 0 14581 0 0 17566 0 0 15276 0 0 15242 0 0 17748 0 0 15079 0 0 15435 0 0 14525 0 0 12888 0 0 16842 0 0 13778 0 0 17673 0 0 15683 0 0 15602 0 0 17674 0 0 15342 0 0 15961 0 0 14355 0 0 12493 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 21252000 0 21252000 0 NaN 4089 2226 2071 2071 4014 4280 4568 5076 4568 5076 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11529 4568 5076 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11529 4568 5076 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11529 Q9UQ35 1112 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 1 103.312 4.14432E-07 159.1 138.73 103.31 1;2 S GRSRSSSPVTELASRSPIRQDRGEFSASPML X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Oxidation (M);X XXXXPPPPPPPPPPPPPPPPPPXXXXXXXXX S(1)PIRQDR S(103.31)PIRQDR 1 3 0.36493 13395 28373 0 15047 25826 0 14688 27648 0 13651 25828 0 9935.9 19516 0 13567 26105 0 9111.7 19968 0 13075 25260 0 15915 27422 0 3689.9 15740 0 12680 26845 0 14207 24397 0 14656 27783 0 14100 26524 0 10358 20299 0 13604 26173 0 9500.8 20508 0 13245 25844 0 15415 26742 0 3777.1 15406 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 294900000 11976000 282920000 0 NaN 4090 2226 1112 1112 4122;4458;4459 4395;4749;4750 4686;5054;5055 5202;5609;5610 4686 5202 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5491 5054 5609 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13815 5054 5609 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13815 Q9UQ35 1916 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.97507 17.0883 0.0353607 55.839 28.067 55.839 1 S RSRTSVTRRRSRSRASPVSRRRSRSRTPPVT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX S(0.019)RAS(0.975)PVS(0.006)R S(-17.09)RAS(17.09)PVS(-22.21)R 4 2 -0.53721 3241.3 0 0 4209.8 0 0 3737.4 0 0 4290.8 0 0 3317.9 0 0 3140.3 0 0 3336.9 0 0 3362.8 0 0 3825.2 0 0 1535.8 0 0 3068.9 0 0 3977.3 0 0 3729.7 0 0 4382.2 0 0 3392.5 0 0 3204.7 0 0 3409.2 0 0 3410.8 0 0 3753.6 0 0 1524 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6161700 6161700 0 0 NaN 4091 2226 1916 1916 4259 4538 4837 5368 4837 5368 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4864 4837 5368 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4864 4837 5368 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4864 Q9UQ35 484 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.989846 17.4312 0.0455726 49.189 25.632 49.189 2 S RDKSHSHTPSRRMGRSRSPATAKRGRSRSRT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX S(0.99)RS(0.572)PAT(0.438)AK S(17.43)RS(1.19)PAT(-1.19)AK 1 2 0.2712 0 9350 0 0 9452.8 0 0 9604.1 0 0 8887.8 0 0 8152.8 0 0 9017.5 0 0 9349.5 0 0 9060.5 0 0 11047 0 0 4158.9 0 0 8848.4 0 0 8926.5 0 0 9640.6 0 0 9162.3 0 0 8377.7 0 0 9041.3 0 0 9506 0 0 9212 0 0 10828 0 0 4125.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 16316000 0 16316000 0 NaN 4092 2226 484 484 4286 4568;4569 4869 5403 4869 5403 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5945 4869 5403 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5945 4869 5403 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5945 Q9UQ35 486 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.961617 13.9898 0.000871435 103.89 60.255 103.89 1;2 S KSHSHTPSRRMGRSRSPATAKRGRSRSRTPT X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX S(0.038)RS(0.962)PATAK S(-13.99)RS(13.99)PAT(-49.63)AK 3 3 0.20304 20489 9350 0 17192 9452.8 0 21140 9604.1 0 16733 8887.8 0 19558 8152.8 0 20041 9017.5 0 18812 9349.5 0 20108 9060.5 0 18414 11047 0 4087.1 4158.9 0 19391 8848.4 0 16238 8926.5 0 21229 9640.6 0 17262 9162.3 0 19930 8377.7 0 19949 9041.3 0 19174 9506 0 20290 9212 0 18186 10828 0 4313.9 4125.8 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 33539000 17222000 16316000 0 NaN 4093 2226 486 486 4286 4568;4569 4868;4869 5402;5403 4868 5402 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5681 4868 5402 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5681 4868 5402 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5681 Q9UQ35 2044 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 1 60.4896 0.025343 60.49 15.178 60.49 2 S RSRSRTPLLPRKRSRSRSPLAIRRRSRSRTP X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX S(1)RS(1)PLAIR S(60.49)RS(60.49)PLAIR 1 2 -0.36859 0 149230 0 0 156990 0 0 149120 0 0 151240 0 0 106940 0 0 159540 0 0 110930 0 0 144980 0 0 171260 0 0 13932 0 0 141210 0 0 148270 0 0 149650 0 0 155780 0 0 111130 0 0 159380 0 0 114380 0 0 146410 0 0 166430 0 0 16474 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 262340000 0 262340000 0 NaN 4094 2226 2044 2044 4290 4574 4874 5410;5411 4874 5411 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10945 4874 5411 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10945 4874 5411 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10945 Q9UQ35 2046 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 1 60.4896 0.025343 60.49 15.178 60.49 2 S RSRTPLLPRKRSRSRSPLAIRRRSRSRTPRT X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX S(1)RS(1)PLAIR S(60.49)RS(60.49)PLAIR 3 2 -0.36859 0 149230 0 0 156990 0 0 149120 0 0 151240 0 0 106940 0 0 159540 0 0 110930 0 0 144980 0 0 171260 0 0 13932 0 0 141210 0 0 148270 0 0 149650 0 0 155780 0 0 111130 0 0 159380 0 0 114380 0 0 146410 0 0 166430 0 0 16474 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 262340000 0 262340000 0 NaN 4095 2226 2046 2046 4290 4574 4874 5410;5411 4874 5411 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10945 4874 5411 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10945 4874 5411 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10945 Q9UQ35 1497 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.999313 31.675 7.67659E-05 122.13 100.08 122.13 2 S SSPEPKALPQTPRPRSRSPSSPELNNKCLTP X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(0.999)RS(0.995)PS(0.006)SPELNNK S(31.67)RS(22.69)PS(-22.69)S(-48.6)PELNNK 1 3 0.57131 0 13219 0 0 13718 0 0 14065 0 0 13010 0 0 16225 0 0 15666 0 0 16872 0 0 14673 0 0 13226 0 0 3575.6 0 0 12511 0 0 12955 0 0 14142 0 0 13444 0 0 16343 0 0 15578 0 0 17043 0 0 14864 0 0 13205 0 0 3706.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 11607000 0 11607000 0 NaN 4096 2226 1497 1497 4300 4585 4885 5426 4885 5426 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8912 4885 5426 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8912 4885 5426 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8912 Q9UQ35 1499 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.994624 22.6865 7.67659E-05 122.13 100.08 122.13 2 S PEPKALPQTPRPRSRSPSSPELNNKCLTPQR X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX S(0.999)RS(0.995)PS(0.006)SPELNNK S(31.67)RS(22.69)PS(-22.69)S(-48.6)PELNNK 3 3 0.57131 0 13219 0 0 13718 0 0 14065 0 0 13010 0 0 16225 0 0 15666 0 0 16872 0 0 14673 0 0 13226 0 0 3575.6 0 0 12511 0 0 12955 0 0 14142 0 0 13444 0 0 16343 0 0 15578 0 0 17043 0 0 14864 0 0 13205 0 0 3706.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 11607000 0 11607000 0 NaN 4097 2226 1499 1499 4300 4585 4885 5426 4885 5426 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8912 4885 5426 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8912 4885 5426 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8912 Q9UQ35 818 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.502132 0.544552 0.00978086 73.927 57.703 46.408 2 S QPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX S(0.069)RS(0.452)S(0.502)S(0.57)S(0.407)PPPKQK S(-9.32)RS(-0.54)S(0.54)S(1.6)S(-1.6)PPPKQK 4 3 -0.56729 0 17909 0 0 16015 0 0 18846 0 0 16811 0 0 15365 0 0 18162 0 0 16112 0 0 16473 0 0 18869 0 0 4979.4 0 0 16950 0 0 15133 0 0 18882 0 0 17234 0 0 15811 0 0 18133 0 0 16440 0 0 16739 0 0 18501 0 0 5070 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 20206000 0 20206000 0 NaN 4098 2226 818 818 4304;4305 4589;4590 4891 5433;5434 4891 5434 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6523 4890 5432 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6227 4890 5432 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6227 Q9UQ35 819 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.569508 1.60128 0.045075 46.408 27.951 46.408 2 S PKAKSRTPPRRSRSSSSPPPKQKSKTPSRQS X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX S(0.069)RS(0.452)S(0.502)S(0.57)S(0.407)PPPKQK S(-9.32)RS(-0.54)S(0.54)S(1.6)S(-1.6)PPPKQK 5 3 -0.56729 0 17909 0 0 16015 0 0 18846 0 0 16811 0 0 15365 0 0 18162 0 0 16112 0 0 16473 0 0 18869 0 0 4979.4 0 0 16950 0 0 15133 0 0 18882 0 0 17234 0 0 15811 0 0 18133 0 0 16440 0 0 16739 0 0 18501 0 0 5070 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 20206000 0 20206000 0 NaN 4099 2226 819 819 4304;4305 4589;4590 4891 5433;5434 4891 5434 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6523 4891 5434 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6523 4891 5434 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6523 Q9UQ35 820 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.965037 14.6998 0.00978086 73.927 57.703 73.927 2 S KAKSRTPPRRSRSSSSPPPKQKSKTPSRQSH X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX S(0.211)RS(0.334)S(0.423)S(0.066)S(0.965)PPPK S(-3.04)RS(-1.04)S(1.04)S(-10.84)S(14.7)PPPK 6 3 0.65734 0 15567 0 0 11406 0 0 13299 0 0 11699 0 0 11582 0 0 14753 0 0 12000 0 0 12340 0 0 13677 0 0 4326.8 0 0 14722 0 0 10777 0 0 13501 0 0 12044 0 0 11862 0 0 14630 0 0 12241 0 0 12602 0 0 13424 0 0 4359.8 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 11407000 0 11407000 0 NaN 4100 2226 820 820 4304;4305 4589;4590 4890 5431;5432 4890 5432 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6227 4890 5432 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6227 4890 5432 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6227 Q9UQ35 2032 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 1 71.8962 0.0153323 71.896 21.807 71.896 2 S RSRSRTPPAIRRRSRSRTPLLPRKRSRSRSP X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX S(1)RT(1)PLLPR S(71.9)RT(71.9)PLLPR 1 2 -0.29951 0 78712 0 0 73543 0 0 77694 0 0 75304 0 0 40670 0 0 76752 0 0 44612 0 0 62821 0 0 82599 0 0 6755.6 0 0 74478 0 0 69483 0 0 77846 0 0 77235 0 0 43550 0 0 76706 0 0 46263 0 0 63757 0 0 79890 0 0 7815.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 167790000 0 167790000 0 NaN 4101 2226 2032 2032 4314 4599 4900 5443 4900 5443 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11655 4900 5443 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11655 4900 5443 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11655 Q9UQ35 2020 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 1 49.7767 0.0446138 49.777 29.523 49.777 2 S RSRSRTSPVTRRRSRSRTPPAIRRRSRSRTP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX S(1)RT(1)PPAIR S(49.78)RT(49.78)PPAIR 1 2 -0.44252 0 57830 0 0 55739 0 0 60936 0 0 54756 0 0 42223 0 0 58180 0 0 45233 0 0 51956 0 0 56296 0 0 9201.6 0 0 54734 0 0 52650 0 0 60957 0 0 56336 0 0 44006 0 0 58103 0 0 46201 0 0 52634 0 0 55078 0 0 9866.8 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 51729000 0 51729000 0 NaN 4102 2226 2020 2020 4315 4600 4901 5444;5445 4901 5445 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7556 4901 5445 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7556 4901 5445 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7556 Q9UQ35 1854 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.919173 9.83384 0.00978255 79.886 51.589 60.301 2 S RGRSRTPPTSRKRSRSRTSPAPWKRSRSRAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(0.919)RT(0.859)S(0.222)PAPWK S(9.83)RT(7.41)S(-7.41)PAPWK 1 3 -0.71786 0 51697 0 0 52528 0 0 54626 0 0 53457 0 0 37586 0 0 53658 0 0 37007 0 0 47062 0 0 62114 0 0 12597 0 0 48930 0 0 49626 0 0 54628 0 0 54834 0 0 39164 0 0 53716 0 0 38385 0 0 47842 0 0 60223 0 0 12951 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 426970000 0 426970000 0 NaN 4103 2226 1854 1854 4318 4603;4604 4905;4906 5449;5450 4906 5450 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13397 4905 5449 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13194 4905 5449 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13194 Q9UQ35 1857 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.997213 23.7126 0.00263955 93.766 57.241 79.886 1;2 S SRTPPTSRKRSRSRTSPAPWKRSRSRASPAT X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX S(0.658)RT(0.345)S(0.997)PAPWK S(2.82)RT(-2.82)S(23.71)PAPWK 4 2 -0.050941 13946 42933 0 15588 44213 0 14991 45440 0 15760 43958 0 11663 30616 0 14463 45051 0 13242 30279 0 12554 38853 0 15359 52057 0 1555 9836.2 0 13201 40635 0 14727 41765 0 14997 45429 0 16151 45168 0 12056 31960 0 14534 45049 0 13461 31434 0 12714 39509 0 15065 50441 0 1754.8 10161 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 255030000 104420000 150610000 0 NaN 4104 2226 1857 1857 4318;4925;4926 4603;4604;5250;5251 4904;4905 5448;5449 4905 5449 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13194 4904 5448 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11473 4904 5448 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11473 Q9UQ35 1975 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.694197 3.9726 0.0249742 61.363 41.876 61.363 1 S SRTPPVTRRRSRSRTSPITRRRSRSRTSPVT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX S(0.018)RT(0.278)S(0.694)PIT(0.009)R S(-15.8)RT(-3.97)S(3.97)PIT(-18.67)R 4 2 0.22562 12309 0 0 16215 0 0 13093 0 0 13888 0 0 11832 0 0 12203 0 0 12368 0 0 14372 0 0 17093 0 0 3625.3 0 0 11651 0 0 15305 0 0 13124 0 0 14375 0 0 12093 0 0 12341 0 0 12694 0 0 14441 0 0 16666 0 0 3746.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26281000 26281000 0 0 NaN 4105 2226 1975 1975 4319 4605 4907 5451 4907 5451 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5644 4907 5451 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5644 4907 5451 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5644 Q9UQ35 1987 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.451269 1.22665 0.0490432 48.561 22.734 48.561 S SRTSPITRRRSRSRTSPVTRRRSRSRTSPVT X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX S(0.012)RT(0.196)S(0.451)PVT(0.34)R S(-15.66)RT(-3.62)S(1.23)PVT(-1.23)R 4 2 0.26659 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4106 2226 1987 1987 4320 4606 4908 5452 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5012 4908 5452 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5012 4908 5452 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5012 Q9UQ35 1421 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.998224 28.3872 1.07818E-20 261.83 179.83 261.83 1 S VLDAVPRTPSRERSSSASSPEMKDGLPRTPS X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;Phospho (STY);X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX SSS(0.998)AS(0.001)SPEMK S(-36.26)S(-40.39)S(28.39)AS(-28.39)S(-59.71)PEMK 3 2 0.12412 62747 0 0 36310 0 0 64572 0 0 36821 0 0 27236 0 0 62303 0 0 30167 0 0 44031 0 0 36370 0 0 10514 0 0 59382 0 0 34304 0 0 64464 0 0 38185 0 0 29891 0 0 61102 0 0 30737 0 0 45192 0 0 35623 0 0 10919 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 77732000 77732000 0 0 NaN 4107 2226 1421 1421 4417 4705;4706 5009;5010 5557;5558 5010 5558 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8916 5010 5558 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8916 5010 5558 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8916 Q9UQ35 914 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.991937 23.1318 0.00191554 108.81 67.233 108.81 1 S VKSSTPPRQSPSRSSSPQPKVKAIISPRQRS X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX S(0.003)S(0.005)S(0.992)PQPK S(-24.86)S(-23.13)S(23.13)PQPK 3 2 -0.38387 43096 0 0 44911 0 0 44500 0 0 42361 0 0 26857 0 0 42112 0 0 26270 0 0 34330 0 0 45658 0 0 2298.6 0 0 40785 0 0 42411 0 0 44511 0 0 43647 0 0 28306 0 0 42129 0 0 27300 0 0 34806 0 0 44228 0 0 2958.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 45795000 45795000 0 0 NaN 4108 2226 914 914 4449 4740 5045 5597 5045 5597 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6279 5045 5597 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6279 5045 5597 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6279 Q9UQ35 1103 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.99894 31.2671 6.83477E-15 229.6 174.13 229.6 1;2 S SKSQTSPKGGRSRSSSPVTELASRSPIRQDR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP SS(0.001)S(0.999)PVTELASR S(-35.66)S(-31.27)S(31.27)PVT(-43.75)ELAS(-107.99)R 3 2 0.11103 159680 28373 0 152440 25826 0 148300 27648 0 138070 25828 0 110000 19516 0 153780 26105 0 98717 19968 0 143460 25260 0 166370 27422 0 14448 15740 0 151050 26845 0 143930 24397 0 149500 27783 0 142890 26524 0 113790 20299 0 153340 26173 0 102880 20508 0 144730 25844 0 161280 26742 0 16924 15406 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 482460000 199540000 282920000 0 NaN 4109 2226 1103 1103 4457;4458;4459 4748;4749;4750 5053;5054;5055 5607;5608;5609;5610 5053 5608 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12146 5053 5608 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12146 5053 5608 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12146 Q9UQ35 1041 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.308698 0 0.0140438 63.827 45.463 63.827 S VQSCPGSLSLCAGVKSSTPPGESYFGVSSLQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.309)S(0.309)T(0.309)PPGES(0.072)Y(0.002)FGVSSLQLK S(0)S(0)T(0)PPGES(-6.33)Y(-21.97)FGVS(-39.79)S(-47.7)LQLK 1 3 0.052037 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4110 2226 1041 1041 4482 4774 5084 5643 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22544 5084 5643 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22544 5084 5643 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22544 Q9UQ35 1042 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.308698 0 0.0140438 63.827 45.463 63.827 S QSCPGSLSLCAGVKSSTPPGESYFGVSSLQL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.309)S(0.309)T(0.309)PPGES(0.072)Y(0.002)FGVSSLQLK S(0)S(0)T(0)PPGES(-6.33)Y(-21.97)FGVS(-39.79)S(-47.7)LQLK 2 3 0.052037 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4111 2226 1042 1042 4482 4774 5084 5643 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22544 5084 5643 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22544 5084 5643 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22544 Q9UQ35 908 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.917736 10.6734 0.0171451 64.121 31.122 64.121 2 S GSSPPRVKSSTPPRQSPSRSSSPQPKVKAII X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX S(0.074)S(0.09)T(0.837)PPRQS(0.918)PS(0.082)R S(-10.67)S(-9.78)T(9.78)PPRQS(10.67)PS(-10.67)R 8 2 0.32051 0 1540.5 0 0 1771.7 0 0 1488.9 0 0 1596 0 0 908.57 0 0 1184.6 0 0 511.41 0 0 1530.5 0 0 1496.2 0 0 1906.4 0 0 1457.5 0 0 1672.7 0 0 1494.4 0 0 1642.9 0 0 951.6 0 0 1213.7 0 0 566.61 0 0 1579.3 0 0 1434.5 0 0 1830.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 2261700 0 2261700 0 NaN 4112 2226 908 908 4483 4775 5085 5644 5085 5644 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5091 5085 5644 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5091 5085 5644 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5091 Q9UQ35 250 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.924053 11.8278 0.0043128 98.033 46.179 98.033 1 S KSKRKSKDKKRKRSRSTTPAPKSRRAHRSTS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX S(0.924)T(0.061)T(0.015)PAPK S(11.83)T(-11.83)T(-17.81)PAPK 1 2 0.23459 35615 0 0 46195 0 0 36518 0 0 46475 0 0 41257 0 0 32960 0 0 42249 0 0 42976 0 0 49067 0 0 4432.7 0 0 33704 0 0 43640 0 0 36780 0 0 47485 0 0 41608 0 0 33774 0 0 43144 0 0 42854 0 0 48125 0 0 5168.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 89465000 89465000 0 0 NaN 4113 2226 250 250 4538 4840 5157 5726 5157 5726 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7759 5157 5726 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7759 5157 5726 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7759 Q9UQ35 952 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.999996 54.1454 3.51109E-06 143.18 100.95 143.18 2 S SPSRVTSRTTPRRSRSVSPCSNVESRLLPRY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPXXXXX S(1)VS(0.998)PCS(0.002)NVESR S(54.15)VS(27.56)PCS(-27.56)NVES(-37.35)R 1 2 -0.18476 0 23844 0 0 20296 0 0 25770 0 0 22897 0 0 16811 0 0 25091 0 0 19691 0 0 22335 0 0 23387 0 0 7881.8 0 0 22569 0 0 19188 0 0 25734 0 0 23386 0 0 17633 0 0 25032 0 0 20006 0 0 22748 0 0 22919 0 0 7938.6 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 14526000 0 14526000 0 NaN 4114 2226 952 952 4568 4872 5189 5761;5762 5189 5762 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8350 5189 5762 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8350 5189 5762 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8350 Q9UQ35 954 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.998064 27.5559 3.51109E-06 143.18 100.95 143.18 2 S SRVTSRTTPRRSRSVSPCSNVESRLLPRYSH X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX S(1)VS(0.998)PCS(0.002)NVESR S(54.15)VS(27.56)PCS(-27.56)NVES(-37.35)R 3 2 -0.18476 0 23844 0 0 20296 0 0 25770 0 0 22897 0 0 16811 0 0 25091 0 0 19691 0 0 22335 0 0 23387 0 0 7881.8 0 0 22569 0 0 19188 0 0 25734 0 0 23386 0 0 17633 0 0 25032 0 0 20006 0 0 22748 0 0 22919 0 0 7938.6 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 14526000 0 14526000 0 NaN 4115 2226 954 954 4568 4872 5189 5761;5762 5189 5762 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8350 5189 5762 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8350 5189 5762 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8350 Q9UQ35 2272 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 1 138.419 4.86221E-07 155.49 141.58 155.49 1 S ADSRTPAAAAAMNLASPRTAVAPSAVNLADP X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPXXXXXXXXXXXXX TPAAAAAMNLAS(1)PR T(-138.42)PAAAAAMNLAS(138.42)PR 12 3 -0.2785 15485 0 0 11105 0 0 14046 0 0 14669 0 0 11256 0 0 14995 0 0 12534 0 0 14738 0 0 13612 0 0 5110.6 0 0 14647 0 0 10511 0 0 14194 0 0 14849 0 0 11606 0 0 15022 0 0 12726 0 0 14947 0 0 13385 0 0 5153.3 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 88856000 88856000 0 0 NaN 4116 2226 2272 2272 4820 5142;5143 5481;5482 6099;6100 5482 6100 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15010 5482 6100 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15010 5482 6100 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15010 Q9UQ35 973 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.824075 7.20451 0.0017545 96.464 69.791 96.464 1 S NVESRLLPRYSHSGSSSPDTKVKPETPPRQS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX YSHS(0.001)GS(0.018)S(0.824)S(0.157)PDTK Y(-68.6)S(-45.62)HS(-29.35)GS(-16.59)S(7.2)S(-7.2)PDT(-49.16)K 7 3 -0.27717 10645 0 0 12180 0 0 10985 0 0 11203 0 0 8629.8 0 0 14126 0 0 10420 0 0 14481 0 0 13399 0 0 2684.3 0 0 10074 0 0 11500 0 0 11016 0 0 11610 0 0 8924.8 0 0 14039 0 0 10602 0 0 14593 0 0 13094 0 0 2862.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15766000 15766000 0 0 NaN 4117 2226 973 973 5425 5778 6168 6864 6168 6864 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6487 6168 6864 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6487 6168 6864 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6487 Q9UQ80 2 Q9UQ80 Q9UQ80 Proliferation-associated protein 2G4 PA2G4 sp|Q9UQ80|PA2G4_HUMAN Proliferation-associated protein 2G4 OS=Homo sapiens GN=PA2G4 PE=1 SV=3 1 72.5745 1.7094E-16 132.47 114.61 132.47 1 S ______________MSGEDEQQEQTIAEDLV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(1)GEDEQQEQTIAEDLVVTK S(72.57)GEDEQQEQT(-72.57)IAEDLVVT(-118.47)K 1 2 0.27276 5732.7 0 0 12455 0 0 7320 0 0 11922 0 0 8675.4 0 0 4768.9 0 0 8359.2 0 0 10162 0 0 11732 0 0 57741 0 0 5430.5 0 0 11762 0 0 7295.5 0 0 12159 0 0 8722.5 0 0 5275.8 0 0 8616.5 0 0 11725 0 0 11433 0 0 54605 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 91089000 91089000 0 0 0.33107 4118 2227 2 2 3779 4025 4293;4294 4772;4773 4293 4772 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22191 4293 4772 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22191 4293 4772 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22191 Q9UQ84 744 Q9UQ84 Q9UQ84 Exonuclease 1 EXO1 sp|Q9UQ84|EXO1_HUMAN Exonuclease 1 OS=Homo sapiens GN=EXO1 PE=1 SV=2 0.505673 0.203072 3.16601E-21 260.97 224.65 260.97 1 S KKDTPLRNKVPGLYKSSSADSLSTTKIKPLG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPXXXXX S(0.506)S(0.011)S(0.483)ADSLSTTK S(0.2)S(-16.52)S(-0.2)ADS(-30.15)LS(-70.31)T(-81.36)T(-95.9)K 1 2 1.8101 34733 0 0 35267 0 0 34960 0 0 36227 0 0 26941 0 0 33837 0 0 28816 0 0 33783 0 0 40053 0 0 6003.5 0 0 32867 0 0 33321 0 0 35095 0 0 37100 0 0 27851 0 0 34034 0 0 29550 0 0 34070 0 0 39044 0 0 6434.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 35784000 35784000 0 0 NaN 4119 2228 744 744 4413 4701 5005 5553 5005 5553 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9897 5005 5553 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9897 5005 5553 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9897 Q9UQ84 598 Q9UQ84 Q9UQ84 Exonuclease 1 EXO1 sp|Q9UQ84|EXO1_HUMAN Exonuclease 1 OS=Homo sapiens GN=EXO1 PE=1 SV=2 0.920296 10.6377 0.000187772 114.93 89.636 114.93 1 S EESYSFESSKFTRTISPPTLGTLRSCFSWSG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX T(0.079)IS(0.92)PPTLGTLR T(-10.64)IS(10.64)PPT(-35.78)LGT(-72.45)LR 3 2 1.0286 7984.8 0 0 9481.4 0 0 7307.5 0 0 9551.3 0 0 8470.1 0 0 7989.5 0 0 7655.9 0 0 9278.2 0 0 9735.4 0 0 11164 0 0 7553.2 0 0 8957.2 0 0 7409.9 0 0 9777.6 0 0 8517.3 0 0 8115.2 0 0 7889.1 0 0 9593.1 0 0 9517.7 0 0 10727 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9574600 9574600 0 0 NaN 4120 2228 598 598 4755 5072 5405 6009 5405 6009 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18589 5405 6009 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18589 5405 6009 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18589 Q9UQC2 405 Q9UQC2 Q9UQC2 GRB2-associated-binding protein 2 GAB2 sp|Q9UQC2|GAB2_HUMAN GRB2-associated-binding protein 2 OS=Homo sapiens GN=GAB2 PE=1 SV=1 0.976604 16.2058 5.90615E-31 297.56 284.8 297.56 1 S NTLPAMDNSRLHRASSCETYEYPQRGGESAG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX AS(0.023)S(0.977)CETYEYPQR AS(-16.21)S(16.21)CET(-64.86)Y(-136.82)EY(-159.17)PQR 3 2 -1.6343 15466 0 0 15237 0 0 13856 0 0 14708 0 0 12147 0 0 14989 0 0 14456 0 0 15649 0 0 15808 0 0 5143.4 0 0 14629 0 0 14391 0 0 14029 0 0 15139 0 0 12461 0 0 15029 0 0 14641 0 0 15827 0 0 15541 0 0 5205.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26157000 26157000 0 0 NaN 4121 2229 405 405 492 523 563 628 563 628 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9654 563 628 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9654 563 628 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9654 Q9UQE7 1083 Q9UQE7 Q9UQE7 Structural maintenance of chromosomes protein 3 SMC3 sp|Q9UQE7|SMC3_HUMAN Structural maintenance of chromosomes protein 3 OS=Homo sapiens GN=SMC3 PE=1 SV=2 0.875213 8.72019 5.12064E-08 168.99 144.07 168.99 1 S QDEGEGSGESERGSGSQSSVPSVDQFTGVGI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP GS(0.118)GS(0.875)QS(0.007)SVPSVDQFTGVGIR GS(-8.72)GS(8.72)QS(-20.93)S(-36.2)VPS(-73.59)VDQFT(-116.92)GVGIR 4 2 0.31551 3506.9 0 0 3373.9 0 0 4483.3 0 0 3756.1 0 0 5821.3 0 0 4208.9 0 0 6736.1 0 0 6012.5 0 0 3716.7 0 0 32183 0 0 3322.1 0 0 3189.4 0 0 4476.4 0 0 3840.6 0 0 5838.5 0 0 4281.8 0 0 6730.1 0 0 6930.8 0 0 3795.3 0 0 30443 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8614400 8614400 0 0 NaN 4122 2230 1083 1083 1613 1699 1836 2042 1836 2042 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18790 1836 2042 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18790 1836 2042 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18790 Q9UQE7 1067 Q9UQE7 Q9UQE7 Structural maintenance of chromosomes protein 3 SMC3 sp|Q9UQE7|SMC3_HUMAN Structural maintenance of chromosomes protein 3 OS=Homo sapiens GN=SMC3 PE=1 SV=2 0.999898 39.9254 5.09991E-23 251.52 226.63 251.52 1 S KATLVMKKGDVEGSQSQDEGEGSGESERGSG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPPPXXX KGDVEGSQS(1)QDEGEGSGESER KGDVEGS(-39.93)QS(39.93)QDEGEGS(-115.36)GES(-149.04)ER 9 3 -0.38518 5887.7 0 0 5070.8 0 0 6507.4 0 0 5334.2 0 0 7264.3 0 0 6329.3 0 0 7140.7 0 0 7380 0 0 5270.9 0 0 18817 0 0 5573.6 0 0 4791.7 0 0 6526 0 0 5476.9 0 0 7323.6 0 0 6348.4 0 0 7223.3 0 0 7929 0 0 5280.1 0 0 17889 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17386000 17386000 0 0 0.70424 4123 2230 1067 1067 2063 2183 2351 2621 2351 2621 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6988 2351 2621 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6988 2351 2621 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6988 Q9UQL6 498 Q9UQL6 Q9UQL6 Histone deacetylase 5 HDAC5 sp|Q9UQL6|HDAC5_HUMAN Histone deacetylase 5 OS=Homo sapiens GN=HDAC5 PE=1 SV=2 0.730204 7.33442 5.67071E-34 297.73 278.48 297.73 1 S TVGKLPRHRPLSRTQSSPLPQSPQALQQLVM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP T(0.135)QS(0.73)S(0.135)PLPQSPQALQQLVMQQQHQQFLEK T(-7.33)QS(7.33)S(-7.33)PLPQS(-54.09)PQALQQLVMQQQHQQFLEK 3 4 0.77938 4760.8 0 0 3137.2 0 0 4555.7 0 0 3811.5 0 0 2815.3 0 0 4393.3 0 0 2743.2 0 0 4075.6 0 0 3337.8 0 0 17961 0 0 4504.2 0 0 2967.4 0 0 4577.7 0 0 3881.7 0 0 2959.3 0 0 4407.5 0 0 2812.1 0 0 4641.6 0 0 3268.2 0 0 17006 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18066000 18066000 0 0 NaN 4124 2231 498 498 4886 5211 5551 6170 5551 6170 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22764 5551 6170 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22764 5551 6170 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22764 Q9UQN3 199 Q9UQN3 Q9UQN3 Charged multivesicular body protein 2b CHMP2B sp|Q9UQN3|CHM2B_HUMAN Charged multivesicular body protein 2b OS=Homo sapiens GN=CHMP2B PE=1 SV=1 0.98077 17.0758 3.22503E-14 222.2 163.95 222.2 1 S AARSLPSASTSKATISDEEIERQLKALGVD_ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX AT(0.019)IS(0.981)DEEIER AT(-17.08)IS(17.08)DEEIER 4 2 1.4539 24343 0 0 23397 0 0 23017 0 0 25134 0 0 16789 0 0 25525 0 0 16561 0 0 23148 0 0 23823 0 0 8065.7 0 0 23030 0 0 22113 0 0 23176 0 0 25707 0 0 17409 0 0 25553 0 0 17067 0 0 23554 0 0 23199 0 0 8130.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28998000 28998000 0 0 NaN 4125 2232 199 199 528 561 601 669 601 669 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11576 601 669 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11576 601 669 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11576 Q9UQR0 499 Q9UQR0 Q9UQR0 Sex comb on midleg-like protein 2 SCML2 sp|Q9UQR0|SCML2_HUMAN Sex comb on midleg-like protein 2 OS=Homo sapiens GN=SCML2 PE=1 SV=1 0.843292 7.30904 0.000165748 101.62 90.678 101.62 1;2 S QSAKEDVTERQSTKRSPQQTVPYVVPLSPKL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPX S(0.843)PQQT(0.157)VPYVVPLSPK S(7.31)PQQT(-7.31)VPY(-51.58)VVPLS(-87.18)PK 1 3 0.84749 6753.9 5551.7 0 7512.3 7133.8 0 6339.7 5509 0 7257.7 6920.9 0 4860.4 5065.5 0 6751.3 6525.2 0 5425.3 4480.3 0 5453.5 7286.9 0 7458.6 7282.7 0 10127 16144 0 6389.4 5253.1 0 7095.1 6737.8 0 6390.5 5543.2 0 7459.4 7112.8 0 5029.6 5161.1 0 6792.6 6598.1 0 5551 4665.4 0 5825.7 7766.2 0 7273.1 7067 0 9662 15370 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 25530000 11268000 14263000 0 NaN 4126 2233 499 499 3482;4159 3699;4433;4434 4725;4726 5244;5245 4725 5244 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20308 4725 5244 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20308 4725 5244 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20308 Q9UQR0 511 Q9UQR0 Q9UQR0 Sex comb on midleg-like protein 2 SCML2 sp|Q9UQR0|SCML2_HUMAN Sex comb on midleg-like protein 2 OS=Homo sapiens GN=SCML2 PE=1 SV=1 0.999999 58.5904 8.29342E-05 120.23 109.62 120.23 1;2 S TKRSPQQTVPYVVPLSPKLPKTKEYASEGEP X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPXXXXXXXXXXXXX SPQQTVPYVVPLS(1)PK S(-90.85)PQQT(-82.85)VPY(-58.59)VVPLS(58.59)PK 13 3 0.024148 16036 5551.7 0 25171 7133.8 0 18132 5509 0 24236 6920.9 0 12022 5065.5 0 16904 6525.2 0 12443 4480.3 0 20707 7286.9 0 25532 7282.7 0 23942 16144 0 15182 5253.1 0 23772 6737.8 0 18064 5543.2 0 24824 7112.8 0 12579 5161.1 0 17364 6598.1 0 13004 4665.4 0 21345 7766.2 0 24637 7067 0 23023 15370 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 76195000 61932000 14263000 0 NaN 4127 2233 511 511 3482;4159 3699;4433;4434 3945;4724;4726 4382;5243;5245 4724 5243 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19386 4724 5243 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19386 4724 5243 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19386 Q9UQR0 590 Q9UQR0 Q9UQR0 Sex comb on midleg-like protein 2 SCML2 sp|Q9UQR0|SCML2_HUMAN Sex comb on midleg-like protein 2 OS=Homo sapiens GN=SCML2 PE=1 SV=1 0.999994 55.7513 0.0155286 83.047 60.394 83.047 1 S RSVPGTTSSPLVGDISPKSSPHEVKFQMQRK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX SVPGTTSSPLVGDIS(1)PK S(-71.43)VPGT(-65.37)T(-63.72)S(-55.75)S(-55.75)PLVGDIS(55.75)PK 15 3 -0.32455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4128 2233 590 590 4557 4861 5178 5750 5178 5750 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17805 5178 5750 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17805 5178 5750 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17805 Q9UQR1 784 Q9UQR1 Q9UQR1 Zinc finger protein 148 ZNF148 sp|Q9UQR1|ZN148_HUMAN Zinc finger protein 148 OS=Homo sapiens GN=ZNF148 PE=1 SV=2 0.880952 9.46528 8.58621E-07 144.51 130.06 144.51 1 S FPLVNVNDNRAGMTSSPDATTGQTFG_____ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPXXXXX AGMT(0.019)S(0.1)S(0.881)PDAT(0.001)TGQTFG AGMT(-16.73)S(-9.47)S(9.47)PDAT(-30.98)T(-53.2)GQT(-85.91)FG 6 2 -3.8413 13028 0 0 17542 0 0 16540 0 0 13983 0 0 14039 0 0 19691 0 0 17718 0 0 18321 0 0 13964 0 0 11371 0 0 12341 0 0 16551 0 0 16429 0 0 14667 0 0 14443 0 0 19487 0 0 17756 0 0 18773 0 0 13938 0 0 11131 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 31571000 31571000 0 0 NaN 4129 2234 784 784 216 230 248 276 248 276 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14438 248 276 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14438 248 276 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14438 Q9UQR1 150 Q9UQR1 Q9UQR1 Zinc finger protein 148 ZNF148 sp|Q9UQR1|ZN148_HUMAN Zinc finger protein 148 OS=Homo sapiens GN=ZNF148 PE=1 SV=2 1 62.8229 0.0255284 62.823 28.015 62.823 1 S REPVDLQKKKKRKQRSPAKILTINEDGSLGL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX KQRS(1)PAK KQRS(62.82)PAK 4 3 0.50247 11844 0 0 6476.4 0 0 13384 0 0 6601.6 0 0 8823.2 0 0 12493 0 0 8046.5 0 0 10037 0 0 7342.5 0 0 3284.4 0 0 11213 0 0 6118.8 0 0 13331 0 0 6865.3 0 0 9211.4 0 0 12235 0 0 8208.6 0 0 10262 0 0 7274.7 0 0 3325 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10351000 10351000 0 0 NaN 4130 2234 150 150 2183 2307 2484 2764 2484 2764 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5702 2484 2764 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5702 2484 2764 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5702 Q9Y227 595 Q9Y227 Q9Y227 Ectonucleoside triphosphate diphosphohydrolase 4 ENTPD4 sp|Q9Y227|ENTP4_HUMAN Ectonucleoside triphosphate diphosphohydrolase 4 OS=Homo sapiens GN=ENTPD4 PE=1 SV=1 0.333333 0 0.00867303 78.758 69.662 78.758 S LYLLRLRRIHRRTPRSSSAAALWMEEGLPAQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.333)S(0.333)S(0.333)AAALWMEEGLPAQNAPGTL S(0)S(0)S(0)AAALWMEEGLPAQNAPGT(-77.68)L 1 3 -0.02285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4131 2235 595 595 4411 4699 5003 5551 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23894 5003 5551 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23894 5003 5551 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23894 Q9Y227 596 Q9Y227 Q9Y227 Ectonucleoside triphosphate diphosphohydrolase 4 ENTPD4 sp|Q9Y227|ENTP4_HUMAN Ectonucleoside triphosphate diphosphohydrolase 4 OS=Homo sapiens GN=ENTPD4 PE=1 SV=1 0.333333 0 0.00867303 78.758 69.662 78.758 S YLLRLRRIHRRTPRSSSAAALWMEEGLPAQN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.333)S(0.333)S(0.333)AAALWMEEGLPAQNAPGTL S(0)S(0)S(0)AAALWMEEGLPAQNAPGT(-77.68)L 2 3 -0.02285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4132 2235 596 596 4411 4699 5003 5551 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23894 5003 5551 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23894 5003 5551 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23894 Q9Y227 597 Q9Y227 Q9Y227 Ectonucleoside triphosphate diphosphohydrolase 4 ENTPD4 sp|Q9Y227|ENTP4_HUMAN Ectonucleoside triphosphate diphosphohydrolase 4 OS=Homo sapiens GN=ENTPD4 PE=1 SV=1 0.333333 0 0.00867303 78.758 69.662 78.758 S LLRLRRIHRRTPRSSSAAALWMEEGLPAQNA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.333)S(0.333)S(0.333)AAALWMEEGLPAQNAPGTL S(0)S(0)S(0)AAALWMEEGLPAQNAPGT(-77.68)L 3 3 -0.02285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4133 2235 597 597 4411 4699 5003 5551 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23894 5003 5551 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23894 5003 5551 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23894 Q9Y248 182 Q9Y248 Q9Y248 DNA replication complex GINS protein PSF2 GINS2 sp|Q9Y248|PSF2_HUMAN DNA replication complex GINS protein PSF2 OS=Homo sapiens GN=GINS2 PE=1 SV=1 0.999966 44.6655 1.62896E-10 195.58 181.91 195.58 1 S MYKLRTNLQPLESTQSQDF____________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPXXXXXXXXXXXX TNLQPLESTQS(1)QDF T(-168.58)NLQPLES(-69.74)T(-44.67)QS(44.67)QDF 11 2 0.039683 5656.2 0 0 6243.4 0 0 6222.9 0 0 5837.6 0 0 10089 0 0 5252.6 0 0 9704.3 0 0 6575.9 0 0 7151 0 0 21661 0 0 5354.3 0 0 5895.6 0 0 6280.1 0 0 6009.2 0 0 10002 0 0 5348.4 0 0 9826.7 0 0 7197.5 0 0 7164.1 0 0 20548 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 43318000 43318000 0 0 NaN 4134 2237 182 182 4805 5125 5464 6080 5464 6080 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18752 5464 6080 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18752 5464 6080 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18752 Q9Y285 301 Q9Y285 Q9Y285 Phenylalanine--tRNA ligase alpha subunit FARSA sp|Q9Y285|SYFA_HUMAN Phenylalanine--tRNA ligase alpha subunit OS=Homo sapiens GN=FARSA PE=1 SV=3 0.836911 7.10419 3.54557E-06 138.05 106.21 138.05 1 S LQLPMDYVQRVKRTHSQGGYGSQGYKYNWKL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX T(0.163)HS(0.837)QGGYGSQGYK T(-7.1)HS(7.1)QGGY(-41.32)GS(-72.03)QGY(-118.21)K 3 3 0.49402 17264 0 0 13686 0 0 16400 0 0 12434 0 0 15123 0 0 19387 0 0 17499 0 0 15865 0 0 12827 0 0 5442.7 0 0 16333 0 0 12922 0 0 16552 0 0 12955 0 0 15452 0 0 19088 0 0 17571 0 0 16214 0 0 12854 0 0 5492.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11924000 11924000 0 0 NaN 4135 2239 301 301 4740 5055 5387 5990 5387 5990 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8000 5387 5990 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8000 5387 5990 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8000 Q9Y297 127 Q9Y297 Q9Y297 F-box/WD repeat-containing protein 1A BTRC sp|Q9Y297|FBW1A_HUMAN F-box/WD repeat-containing protein 1A OS=Homo sapiens GN=BTRC PE=1 SV=1 0.989167 22.1797 0.0350142 50.354 25.972 50.354 1 S ANGTSSMIVPKQRKLSASYEKEKELCVKYFE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX KLS(0.989)AS(0.006)Y(0.005)EK KLS(22.18)AS(-22.18)Y(-23.1)EK 3 3 0.080636 15206 0 0 15602 0 0 16020 0 0 16879 0 0 14601 0 0 16666 0 0 15494 0 0 15854 0 0 16570 0 0 2348 0 0 14391 0 0 14746 0 0 16068 0 0 17250 0 0 14914 0 0 16709 0 0 15758 0 0 16005 0 0 16304 0 0 2577.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10214000 10214000 0 0 NaN 4136 2241 127 127 2123 2244 2417 2694 2417 2694 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12006 2417 2694 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12006 2417 2694 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12006 Q9Y2D5 152 Q9Y2D5 Q9Y2D5 A-kinase anchor protein 2 AKAP2 sp|Q9Y2D5|AKAP2_HUMAN A-kinase anchor protein 2 OS=Homo sapiens GN=AKAP2 PE=1 SV=3 0.982604 18.8166 1.4572E-07 142.56 117.78 142.56 1 S SQPRDALGDSLQVPVSPSSTTSSRCSSRDGE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPPXXXXXXX DALGDSLQVPVS(0.983)PS(0.013)S(0.003)T(0.001)T(0.001)SSR DALGDS(-73.67)LQVPVS(18.82)PS(-18.82)S(-25.64)T(-30.14)T(-32.31)S(-36.74)S(-41.14)R 12 3 0.029533 11701 0 0 6142 0 0 11023 0 0 5730.6 0 0 6576.9 0 0 11895 0 0 8123 0 0 9288.3 0 0 5799.4 0 0 14363 0 0 11070 0 0 5799.8 0 0 11087 0 0 6008.2 0 0 6956.4 0 0 11642 0 0 8130.7 0 0 9850.6 0 0 5820.8 0 0 13740 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 97849000 97849000 0 0 NaN 4137 2242 152 152 637 679 724 804 724 804 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16748 724 804 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16748 724 804 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16748 Q9Y2D5 720 Q9Y2D5 Q9Y2D5 A-kinase anchor protein 2 AKAP2 sp|Q9Y2D5|AKAP2_HUMAN A-kinase anchor protein 2 OS=Homo sapiens GN=AKAP2 PE=1 SV=3 0.990257 20.0704 3.10169E-06 147.24 108.24 147.24 1 S MVGPFKLRSRKQRTLSMIEEEIRAAQEREEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX T(0.01)LS(0.99)MIEEEIR T(-20.07)LS(20.07)MIEEEIR 3 2 0.4383 100090 0 0 31624 0 0 98251 0 0 32870 0 0 23445 0 0 105160 0 0 29108 0 0 53961 0 0 35255 0 0 100170 0 0 94702 0 0 29881 0 0 98133 0 0 34836 0 0 28295 0 0 101730 0 0 29526 0 0 59130 0 0 34525 0 0 95576 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 75246000 75246000 0 0 NaN 4138 2242 720 720 4791 5109;5110 5443;5444 6054;6055;6056 5444 6056 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23139 5444 6056 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23139 5444 6056 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23139 Q9Y2F5 1854 Q9Y2F5 Q9Y2F5 Little elongation complex subunit 1 ICE1 sp|Q9Y2F5|ICE1_HUMAN Little elongation complex subunit 1 OS=Homo sapiens GN=ICE1 PE=1 SV=5 0.905521 9.8159 1.08015E-06 147.42 121.3 147.42 1 S TSTLRSAKRLRLDTGSPEPETRGVTAEGIHK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX LDT(0.094)GS(0.906)PEPETR LDT(-9.82)GS(9.82)PEPET(-52.14)R 5 2 0.28672 15757 0 0 17668 0 0 15526 0 0 18121 0 0 14914 0 0 14771 0 0 12675 0 0 16870 0 0 18046 0 0 9501 0 0 14910 0 0 16693 0 0 15635 0 0 18525 0 0 15144 0 0 14999 0 0 13156 0 0 17127 0 0 17578 0 0 9336.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12514000 12514000 0 0 NaN 4139 2243 1854 1854 2323 2456 2645 2956 2645 2956 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9662 2645 2956 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9662 2645 2956 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9662 Q9Y2F5 960 Q9Y2F5 Q9Y2F5 Little elongation complex subunit 1 ICE1 sp|Q9Y2F5|ICE1_HUMAN Little elongation complex subunit 1 OS=Homo sapiens GN=ICE1 PE=1 SV=5 0.981017 17.1331 7.13087E-06 136.14 105.14 136.14 1 S PVENSDCSTNSRLSFSPENILIQNQDIVREA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPXX LS(0.019)FS(0.981)PENILIQNQDIVR LS(-17.13)FS(17.13)PENILIQNQDIVR 4 3 -0.0011584 6959.5 0 0 7407.6 0 0 8669.3 0 0 5932.2 0 0 6268.9 0 0 6995.7 0 0 6781.3 0 0 8109.4 0 0 8134.6 0 0 62963 0 0 6591.9 0 0 6989.3 0 0 8602.8 0 0 6198.1 0 0 6512 0 0 7097.2 0 0 6915.2 0 0 9988.4 0 0 7969 0 0 59475 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37548000 37548000 0 0 NaN 4140 2243 960 960 2554 2698 2896 3229 2896 3229 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23749 2896 3229 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23749 2896 3229 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23749 Q9Y2F5 1903 Q9Y2F5 Q9Y2F5 Little elongation complex subunit 1 ICE1 sp|Q9Y2F5|ICE1_HUMAN Little elongation complex subunit 1 OS=Homo sapiens GN=ICE1 PE=1 SV=5 0.999997 54.6612 5.96994E-05 106.69 85.491 106.69 1 S SCSSPAVSAVSQLPLSPKETVESHDKAIANA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX SCSSPAVSAVSQLPLS(1)PK S(-91.45)CS(-91.73)S(-91.93)PAVS(-78.62)AVS(-54.66)QLPLS(54.66)PK 16 3 0.43498 6296.9 0 0 6323.1 0 0 7165.2 0 0 5809.3 0 0 5044.5 0 0 6357.3 0 0 5626.1 0 0 6087.9 0 0 5077.2 0 0 13250 0 0 5961.7 0 0 5970.3 0 0 7140.1 0 0 6005 0 0 5252.1 0 0 6369.4 0 0 5683.9 0 0 6516.3 0 0 5032.9 0 0 12617 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7847400 7847400 0 0 NaN 4141 2243 1903 1903 3649 3879 4133 4592 4133 4592 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18409 4133 4592 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18409 4133 4592 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18409 Q9Y2F5 1712 Q9Y2F5 Q9Y2F5 Little elongation complex subunit 1 ICE1 sp|Q9Y2F5|ICE1_HUMAN Little elongation complex subunit 1 OS=Homo sapiens GN=ICE1 PE=1 SV=5 1 90.1683 0.000112945 116.29 98.592 116.29 1 S SPSPSAASASERVVPSPLQFCAATPKHALPV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX VVPS(1)PLQFCAATPK VVPS(90.17)PLQFCAAT(-90.17)PK 4 3 0.55841 4984.5 0 0 5948 0 0 5675.1 0 0 5846.5 0 0 4263.6 0 0 6292.8 0 0 3548.2 0 0 4928.6 0 0 6165.9 0 0 9494.4 0 0 4719.2 0 0 5618.3 0 0 5656.1 0 0 6016.3 0 0 4402.4 0 0 6288.4 0 0 3717.8 0 0 5282.7 0 0 5972.9 0 0 9054.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10100000 10100000 0 0 NaN 4142 2243 1712 1712 5311 5659 6035 6707 6035 6707 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20883 6035 6707 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20883 6035 6707 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20883 Q9Y2G3 1154 Q9Y2G3 Q9Y2G3 Probable phospholipid-transporting ATPase IF ATP11B sp|Q9Y2G3|AT11B_HUMAN Probable phospholipid-transporting ATPase IF OS=Homo sapiens GN=ATP11B PE=1 SV=2 0.418048 0 5.1703E-11 205.37 174.83 205.37 S RVIGRCSPTHISRSWSASDPFYTNDRSILTL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX S(0.164)WS(0.418)AS(0.418)DPFYTNDR S(-4.07)WS(0)AS(0)DPFY(-114.28)T(-85.45)NDR 3 2 0.17569 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4143 2244 1154 1154 4590 4895 5215 5790 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18894 5215 5790 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18894 5215 5790 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18894 Q9Y2G3 1156 Q9Y2G3 Q9Y2G3 Probable phospholipid-transporting ATPase IF ATP11B sp|Q9Y2G3|AT11B_HUMAN Probable phospholipid-transporting ATPase IF OS=Homo sapiens GN=ATP11B PE=1 SV=2 0.418048 0 5.1703E-11 205.37 174.83 205.37 S IGRCSPTHISRSWSASDPFYTNDRSILTLST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.164)WS(0.418)AS(0.418)DPFYTNDR S(-4.07)WS(0)AS(0)DPFY(-114.28)T(-85.45)NDR 5 2 0.17569 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4144 2244 1156 1156 4590 4895 5215 5790 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18894 5215 5790 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18894 5215 5790 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18894 Q9Y2H2 940 Q9Y2H2 Q9Y2H2 Phosphatidylinositide phosphatase SAC2 INPP5F sp|Q9Y2H2|SAC2_HUMAN Phosphatidylinositide phosphatase SAC2 OS=Homo sapiens GN=INPP5F PE=1 SV=3 0.5 0 6.3575E-06 137.44 118.62 137.44 1 S HGSGLGKGQESPLKKSPSAGDVHILTGFAKP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPX S(0.5)PS(0.5)AGDVHILTGFAK S(0)PS(0)AGDVHILT(-73.82)GFAK 1 3 -0.12141 6371.8 0 0 6072.9 0 0 6692.2 0 0 6163.9 0 0 5804.3 0 0 6021.2 0 0 5272.2 0 0 5841.3 0 0 5522.3 0 0 7057 0 0 6030.5 0 0 5737.4 0 0 6708.3 0 0 6321 0 0 5935.3 0 0 6052.8 0 0 5399.1 0 0 6078.9 0 0 5438.3 0 0 6780.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6485800 6485800 0 0 NaN 4145 2245 940 940 4166 4441 4733 5252 4733 5252 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19366 4733 5252 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19366 4733 5252 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19366 Q9Y2H2 942 Q9Y2H2 Q9Y2H2 Phosphatidylinositide phosphatase SAC2 INPP5F sp|Q9Y2H2|SAC2_HUMAN Phosphatidylinositide phosphatase SAC2 OS=Homo sapiens GN=INPP5F PE=1 SV=3 0.5 0 6.3575E-06 137.44 118.62 137.44 1 S SGLGKGQESPLKKSPSAGDVHILTGFAKPMD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.5)PS(0.5)AGDVHILTGFAK S(0)PS(0)AGDVHILT(-73.82)GFAK 3 3 -0.12141 6371.8 0 0 6072.9 0 0 6692.2 0 0 6163.9 0 0 5804.3 0 0 6021.2 0 0 5272.2 0 0 5841.3 0 0 5522.3 0 0 7057 0 0 6030.5 0 0 5737.4 0 0 6708.3 0 0 6321 0 0 5935.3 0 0 6052.8 0 0 5399.1 0 0 6078.9 0 0 5438.3 0 0 6780.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6485800 6485800 0 0 NaN 4146 2245 942 942 4166 4441 4733 5252 4733 5252 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19366 4733 5252 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19366 4733 5252 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19366 Q9Y2H6 213 Q9Y2H6 Q9Y2H6 Fibronectin type-III domain-containing protein 3A FNDC3A sp|Q9Y2H6|FND3A_HUMAN Fibronectin type-III domain-containing protein 3A OS=Homo sapiens GN=FNDC3A PE=1 SV=4 1 164.569 2.00195E-07 164.57 131.27 164.57 1 S KDKMSSPPSSPQKCPSPINEHNGLIKGQIAG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX CPS(1)PINEHNGLIK CPS(164.57)PINEHNGLIK 3 3 -0.91647 16259 0 0 13298 0 0 15934 0 0 13756 0 0 14871 0 0 17548 0 0 14282 0 0 14346 0 0 15908 0 0 4937.6 0 0 15384 0 0 12565 0 0 16049 0 0 14157 0 0 15147 0 0 17389 0 0 14610 0 0 14663 0 0 15627 0 0 4981.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14256000 14256000 0 0 NaN 4147 2246 213 213 616 655 698 774 698 774 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13892 698 774 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13892 698 774 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13892 Q9Y2I7 307 Q9Y2I7 Q9Y2I7 1-phosphatidylinositol 3-phosphate 5-kinase PIKFYVE sp|Q9Y2I7|FYV1_HUMAN 1-phosphatidylinositol 3-phosphate 5-kinase OS=Homo sapiens GN=PIKFYVE PE=1 SV=3 0.984751 18.443 2.26632E-21 268.66 212.82 268.66 1 S VQEDAGKSPARNRSASITNLSLDRSGSPMVP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX S(0.001)AS(0.985)IT(0.014)NLSLDR S(-29.31)AS(18.44)IT(-18.44)NLS(-98.83)LDR 3 2 -0.4972 25867 0 0 15209 0 0 26518 0 0 15419 0 0 28552 0 0 24594 0 0 29371 0 0 24874 0 0 15308 0 0 16395 0 0 24479 0 0 14369 0 0 26691 0 0 15966 0 0 28852 0 0 24277 0 0 29473 0 0 25434 0 0 15701 0 0 16014 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 71161000 71161000 0 0 NaN 4148 2247 307 307 3605 3832 4085 4541 4085 4541 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15593 4085 4541 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15593 4085 4541 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15593 Q9Y2I7 1714 Q9Y2I7 Q9Y2I7 1-phosphatidylinositol 3-phosphate 5-kinase PIKFYVE sp|Q9Y2I7|FYV1_HUMAN 1-phosphatidylinositol 3-phosphate 5-kinase OS=Homo sapiens GN=PIKFYVE PE=1 SV=3 0.655656 4.00373 0.0384571 47.7 30.419 47.7 1 S GLPTNSTSDSRPKSSSPIRLPEMSGGQTNRT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX S(0.083)S(0.261)S(0.656)PIRLPEMSGGQTNR S(-8.96)S(-4)S(4)PIRLPEMS(-37.51)GGQT(-40.97)NR 3 3 1.215 15693 0 0 13966 0 0 15577 0 0 15185 0 0 17994 0 0 16765 0 0 17330 0 0 15909 0 0 15158 0 0 7379.6 0 0 14849 0 0 13200 0 0 15720 0 0 15542 0 0 18106 0 0 16737 0 0 17613 0 0 16213 0 0 15049 0 0 7316.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12414000 12414000 0 0 NaN 4149 2247 1714 1714 4442 4733 5038 5588 5038 5588 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14391 5038 5588 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14391 5038 5588 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14391 Q9Y2J2 55 Q9Y2J2 Q9Y2J2 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed EPB41L3 sp|Q9Y2J2|E41L3_HUMAN Band 4.1-like protein 3 OS=Homo sapiens GN=EPB41L3 PE=1 SV=2 0.638806 2.47629 8.18882E-08 150.06 124.38 150.06 1 S EQQQALEQFAAAAAHSTPVRREVTDKEQEFA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX AGAPVPEPPKEEQQQALEQFAAAAAHS(0.639)T(0.361)PVRR AGAPVPEPPKEEQQQALEQFAAAAAHS(2.48)T(-2.48)PVRR 27 4 -0.53125 7194.6 0 0 2191.5 0 0 7950.4 0 0 2284.6 0 0 3503.6 0 0 7466.5 0 0 2871.8 0 0 4503 0 0 2212 0 0 12909 0 0 6810.8 0 0 2070.7 0 0 7906.5 0 0 2423.3 0 0 3808.5 0 0 7239.9 0 0 2935.5 0 0 5020.7 0 0 2210.5 0 0 12260 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12075000 12075000 0 0 NaN 4150 2248 55 55 188 196 211 236 211 236 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18683 211 236 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18683 211 236 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18683 Q9Y2J2 460 Q9Y2J2 Q9Y2J2 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed EPB41L3 sp|Q9Y2J2|E41L3_HUMAN Band 4.1-like protein 3 OS=Homo sapiens GN=EPB41L3 PE=1 SV=2 0.972031 15.5547 1.44649E-10 183.63 153.95 142.41 1;2 S DGEVGTGQYATTKGISQTNLITTVTPEKKAE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX GIS(0.972)QT(0.028)NLIT(0.005)T(0.09)VT(0.905)PEKK GIS(15.55)QT(-15.55)NLIT(-23.07)T(-10.05)VT(10.05)PEKK 3 3 -0.10202 57168 31544 0 8782 6118.1 0 60638 31852 0 9043.5 6773.8 0 11074 6841.1 0 59189 33780 0 10015 6239.6 0 28637 16870 0 11369 6362.8 0 22147 17529 0 54109 29850 0 8297.5 5783.3 0 60250 31748 0 10075 7349 0 14151 8410.7 0 56748 32475 0 10283 6383.6 0 30576 18106 0 11160 6273 0 21517 16896 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 82387000 61690000 20697000 0 NaN 4151 2248 460 460 1479;1480 1556;1557;1558 1681;1682;1683 1861;1862;1863 1683 1863 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17950 1681 1861 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18473 1681 1861 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18473 Q9Y2J2 99 Q9Y2J2 Q9Y2J2 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed EPB41L3 sp|Q9Y2J2|E41L3_HUMAN Band 4.1-like protein 3 OS=Homo sapiens GN=EPB41L3 PE=1 SV=2 0.992824 21.4097 0.0106539 74.533 31.507 74.533 1 S DDKLSQKSSSSKLSRSPLKIVKKPKSMQCKV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX LS(0.007)RS(0.993)PLK LS(-21.41)RS(21.41)PLK 4 3 -0.57062 60820 0 0 3942.2 0 0 61203 0 0 5087.3 0 0 3773.3 0 0 56962 0 0 5523.8 0 0 24576 0 0 4399.6 0 0 903.18 0 0 57552 0 0 3730.6 0 0 60906 0 0 5987.1 0 0 7243.8 0 0 54376 0 0 5507.9 0 0 25934 0 0 4388.8 0 0 1419.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 64865000 64865000 0 0 NaN 4152 2248 99 99 2586 2730 2928 3262 2928 3262 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11257 2928 3262 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11257 2928 3262 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11257 Q9Y2J2 762 Q9Y2J2 Q9Y2J2 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed EPB41L3 sp|Q9Y2J2|E41L3_HUMAN Band 4.1-like protein 3 OS=Homo sapiens GN=EPB41L3 PE=1 SV=2 0.849633 7.83598 0.00112336 121.53 58.654 121.53 1 S TDTAVTNEWEKRLSTSPVRLAARQEDAPMIE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX LS(0.011)T(0.14)S(0.85)PVR LS(-19.07)T(-7.84)S(7.84)PVR 4 2 -1.0439 56626 0 0 9665.9 0 0 54104 0 0 9131.6 0 0 9024.5 0 0 54991 0 0 11724 0 0 25087 0 0 8050.1 0 0 1967.7 0 0 53573 0 0 9128 0 0 54078 0 0 10146 0 0 11854 0 0 52702 0 0 11704 0 0 26382 0 0 8098.9 0 0 2433.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 76744000 76744000 0 0 NaN 4153 2248 762 762 2606 2753 2952 3289 2952 3289 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10109 2952 3289 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10109 2952 3289 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10109 Q9Y2J2 962 Q9Y2J2 Q9Y2J2 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed EPB41L3 sp|Q9Y2J2|E41L3_HUMAN Band 4.1-like protein 3 OS=Homo sapiens GN=EPB41L3 PE=1 SV=2 0.998771 29.1003 3.68282E-07 158.98 135.56 158.98 1 S ESSTVKTETISFGSVSPGGVKLEISTKEVPV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPXXXXXXXXXX TETISFGS(0.001)VS(0.999)PGGVK T(-95.36)ET(-89.17)IS(-68.52)FGS(-29.1)VS(29.1)PGGVK 10 3 0.15715 26524 0 0 12253 0 0 25108 0 0 10772 0 0 8330.7 0 0 27646 0 0 8458.5 0 0 15299 0 0 11512 0 0 5048.4 0 0 25093 0 0 11566 0 0 25158 0 0 11422 0 0 9449.3 0 0 26812 0 0 8687.6 0 0 15977 0 0 11229 0 0 5107.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 42093000 42093000 0 0 NaN 4154 2248 962 962 4696 5007 5333 5928 5333 5928 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18477 5333 5928 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18477 5333 5928 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18477 Q9Y2K2 568 Q9Y2K2 Q9Y2K2 Serine/threonine-protein kinase SIK3 SIK3 sp|Q9Y2K2|SIK3_HUMAN Serine/threonine-protein kinase SIK3 OS=Homo sapiens GN=SIK3 PE=1 SV=3 0.999997 55.0618 4.15523E-07 155.49 131.11 155.49 1 S TLHLPTERFSPVRRFSDGAASIQAFKAHLEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX RFS(1)DGAASIQAFK RFS(55.06)DGAAS(-55.06)IQAFK 3 3 -0.91064 5169.3 0 0 6061.6 0 0 6008.2 0 0 5996.4 0 0 6594.4 0 0 6707.4 0 0 5586.9 0 0 4777.8 0 0 5937.3 0 0 6701.9 0 0 4894.6 0 0 5725.8 0 0 6007 0 0 6172.3 0 0 6643.5 0 0 6679.8 0 0 5744.9 0 0 5069.2 0 0 5843.5 0 0 6421.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7918100 7918100 0 0 NaN 4155 2249 568 568 3230 3426 3661 4061 3661 4061 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17635 3661 4061 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17635 3661 4061 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17635 Q9Y2K5 349 Q9Y2K5 Q9Y2K5 R3H domain-containing protein 2 R3HDM2 sp|Q9Y2K5|R3HD2_HUMAN R3H domain-containing protein 2 OS=Homo sapiens GN=R3HDM2 PE=1 SV=3 0.990707 20.4053 5.30085E-07 146.58 120.96 146.58 1 S DGSVRSMRPPVTKASSFSGISILTRGDSIGS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX AS(0.009)S(0.991)FSGISILTR AS(-20.41)S(20.41)FS(-35.67)GIS(-79.74)ILT(-100.24)R 3 2 -0.53346 22494 0 0 14700 0 0 25714 0 0 13252 0 0 11892 0 0 23877 0 0 13904 0 0 19480 0 0 13872 0 0 22515 0 0 21297 0 0 13878 0 0 25542 0 0 13866 0 0 12912 0 0 23447 0 0 14056 0 0 20389 0 0 13689 0 0 21651 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 60931000 60931000 0 0 NaN 4156 2250 349 349 496 527 567 632 567 632 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21077 567 632 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21077 567 632 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21077 Q9Y2K5 315 Q9Y2K5 Q9Y2K5 R3H domain-containing protein 2 R3HDM2 sp|Q9Y2K5|R3HD2_HUMAN R3H domain-containing protein 2 OS=Homo sapiens GN=R3HDM2 PE=1 SV=3 0.948942 12.7071 5.68478E-06 152.23 114.75 152.23 1 S GNREGLSRTSSSRQSSTDSELKSLEPRPWSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX QSS(0.949)T(0.051)DSELK QS(-37.29)S(12.71)T(-12.71)DS(-54.48)ELK 3 2 0.23254 30951 0 0 20712 0 0 29692 0 0 19137 0 0 24142 0 0 32254 0 0 24423 0 0 24381 0 0 21963 0 0 14752 0 0 29282 0 0 19557 0 0 29903 0 0 19956 0 0 24828 0 0 31674 0 0 24780 0 0 25206 0 0 21775 0 0 14455 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13975000 13975000 0 0 NaN 4157 2250 315 315 3151 3343 3574 3964 3574 3964 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9600 3574 3964 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9600 3574 3964 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9600 Q9Y2K6 333 Q9Y2K6 Q9Y2K6 Ubiquitin carboxyl-terminal hydrolase 20 USP20 sp|Q9Y2K6|UBP20_HUMAN Ubiquitin carboxyl-terminal hydrolase 20 OS=Homo sapiens GN=USP20 PE=1 SV=2 1 68.5483 0.013595 68.548 40.812 68.548 1 S GRAISEKERMKDRKFSWGQQRTNSEQVDEDA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX KFS(1)WGQQR KFS(68.55)WGQQR 3 3 0.78527 19033 0 0 21950 0 0 19961 0 0 22092 0 0 19394 0 0 19893 0 0 22658 0 0 22915 0 0 24120 0 0 2120.7 0 0 18014 0 0 20737 0 0 20045 0 0 22639 0 0 19763 0 0 20079 0 0 22947 0 0 22933 0 0 23737 0 0 2527.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13455000 13455000 0 0 NaN 4158 2251 333 333 2059 2178 2346 2613 2346 2613 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14427 2346 2613 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14427 2346 2613 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14427 Q9Y2K7 558 Q9Y2K7 Q9Y2K7 Lysine-specific demethylase 2A KDM2A sp|Q9Y2K7|KDM2A_HUMAN Lysine-specific demethylase 2A OS=Homo sapiens GN=KDM2A PE=1 SV=3 0.999998 57.3585 3.27825E-07 146.75 117.85 146.75 1 S MKPAPRLTPVRPAAASPIVSGARRRRVRCRK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPXXXXXXXX LTPVRPAAAS(1)PIVSGAR LT(-64.87)PVRPAAAS(57.36)PIVS(-57.36)GAR 10 3 -0.41068 14749 0 0 21939 0 0 13767 0 0 21876 0 0 17690 0 0 16760 0 0 18074 0 0 17562 0 0 27352 0 0 4373.8 0 0 13953 0 0 20725 0 0 13968 0 0 22383 0 0 17735 0 0 17046 0 0 18634 0 0 17716 0 0 26594 0 0 4524.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 45742000 45742000 0 0 NaN 4159 2252 558 558 2631 2778 2979 3316 2979 3316 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14256 2979 3316 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14256 2979 3316 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14256 Q9Y2U5 163 Q9Y2U5 Q9Y2U5 Mitogen-activated protein kinase kinase kinase 2 MAP3K2 sp|Q9Y2U5|M3K2_HUMAN Mitogen-activated protein kinase kinase kinase 2 OS=Homo sapiens GN=MAP3K2 PE=1 SV=2 0.49852 0 0.00955795 80.752 53.103 80.752 S RKKRLSIIGPTSRDRSSPPPGYIPDELHQVA X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP DRS(0.499)S(0.499)PPPGY(0.003)IPDELHQVAR DRS(0)S(0)PPPGY(-22.26)IPDELHQVAR 3 4 0.07447 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4160 2254 163 163 796 844 900 991 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14322 900 991 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14322 900 991 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14322 Q9Y2U5 164 Q9Y2U5 Q9Y2U5 Mitogen-activated protein kinase kinase kinase 2 MAP3K2 sp|Q9Y2U5|M3K2_HUMAN Mitogen-activated protein kinase kinase kinase 2 OS=Homo sapiens GN=MAP3K2 PE=1 SV=2 0.49852 0 0.00955795 80.752 53.103 80.752 S KKRLSIIGPTSRDRSSPPPGYIPDELHQVAR X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DRS(0.499)S(0.499)PPPGY(0.003)IPDELHQVAR DRS(0)S(0)PPPGY(-22.26)IPDELHQVAR 4 4 0.07447 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4161 2254 164 164 796 844 900 991 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14322 900 991 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14322 900 991 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14322 Q9Y2U5 153 Q9Y2U5 Q9Y2U5 Mitogen-activated protein kinase kinase kinase 2 MAP3K2 sp|Q9Y2U5|M3K2_HUMAN Mitogen-activated protein kinase kinase kinase 2 OS=Homo sapiens GN=MAP3K2 PE=1 SV=2 1 79.5055 0.000105644 126.25 92.564 126.25 1 S DLDNTVFGAERKKRLSIIGPTSRDRSSPPPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX RLS(1)IIGPTSR RLS(79.51)IIGPT(-79.51)S(-93.57)R 3 3 -0.098257 5293.5 0 0 3405.6 0 0 5649.6 0 0 3716.2 0 0 4723.6 0 0 5595.4 0 0 4374.4 0 0 4471.8 0 0 4448.2 0 0 961.79 0 0 5010.3 0 0 3218.9 0 0 5656.4 0 0 3826.9 0 0 4843.4 0 0 5512.4 0 0 4471.6 0 0 4558 0 0 4385.9 0 0 1009.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9949500 9949500 0 0 NaN 4162 2254 153 153 3327 3529 3766 4182 3766 4182 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13791 3766 4182 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13791 3766 4182 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13791 Q9Y2U8 27 Q9Y2U8 Q9Y2U8 Inner nuclear membrane protein Man1 LEMD3 sp|Q9Y2U8|MAN1_HUMAN Inner nuclear membrane protein Man1 OS=Homo sapiens GN=LEMD3 PE=1 SV=2 0.95279 16.0706 0.0493516 40.622 25.694 40.622 1 S LSDEELFSQLRRYGLSPGPVTESTRPVYLKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPX Y(0.002)GLS(0.953)PGPVT(0.024)ES(0.016)T(0.005)RPVYLK Y(-27.2)GLS(16.07)PGPVT(-16.07)ES(-17.63)T(-22.62)RPVY(-37.18)LK 4 3 -0.2324 6127.6 0 0 7462.7 0 0 5879.6 0 0 7249.7 0 0 4563.2 0 0 6424.9 0 0 5607.2 0 0 6145.5 0 0 8016.2 0 0 14532 0 0 5797.4 0 0 7048.5 0 0 5920.5 0 0 7443.5 0 0 4725.5 0 0 6500.7 0 0 5723.5 0 0 6613.1 0 0 7807.4 0 0 13826 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 4683800 4683800 0 0 NaN 4163 2255 27 27 5380 5731 6114 6799 6114 6799 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18636 6114 6799 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18636 6114 6799 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18636 Q9Y2V2 30 Q9Y2V2 Q9Y2V2 Calcium-regulated heat stable protein 1 CARHSP1 sp|Q9Y2V2|CHSP1_HUMAN Calcium-regulated heat stable protein 1 OS=Homo sapiens GN=CARHSP1 PE=1 SV=2 0.999999 59.3178 0.00172642 97.691 79.234 97.691 1;2 S QASVGLLDTPRSRERSPSPLRGNVVPSPLPT X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP ERS(1)PS(1)PLRGNVVPSPLPTR ERS(59.32)PS(55.37)PLRGNVVPS(-55.37)PLPT(-62.14)R 3 3 0.29135 29261 57970 0 11942 59541 0 28294 61040 0 10863 65728 0 42634 42947 0 29682 64476 0 44593 44060 0 28414 56911 0 11494 72792 0 3817.4 34334 0 27685 54866 0 11275 56282 0 28725 61068 0 11522 67090 0 42415 44694 0 28903 64654 0 44391 45583 0 28665 58414 0 12745 70605 0 4252.1 33647 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 106310000 44394000 61913000 0 NaN 4164 2256 30 30 1137;1138 1197;1198 1289;1290 1416;1417;1418;1419 1290 1417 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14787 1290 1417 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14787 1290 1417 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14787 Q9Y2V2 32 Q9Y2V2 Q9Y2V2 Calcium-regulated heat stable protein 1 CARHSP1 sp|Q9Y2V2|CHSP1_HUMAN Calcium-regulated heat stable protein 1 OS=Homo sapiens GN=CARHSP1 PE=1 SV=2 0.999996 55.3703 0.00172642 97.691 79.234 97.691 2 S SVGLLDTPRSRERSPSPLRGNVVPSPLPTRR X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPX ERS(1)PS(1)PLRGNVVPSPLPTR ERS(59.32)PS(55.37)PLRGNVVPS(-55.37)PLPT(-62.14)R 5 3 0.29135 0 57970 0 0 59541 0 0 61040 0 0 65728 0 0 42947 0 0 64476 0 0 44060 0 0 56911 0 0 72792 0 0 34334 0 0 54866 0 0 56282 0 0 61068 0 0 67090 0 0 44694 0 0 64654 0 0 45583 0 0 58414 0 0 70605 0 0 33647 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 61913000 0 61913000 0 NaN 4165 2256 32 32 1137;1138 1197;1198 1290 1417;1418;1419 1290 1417 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14787 1290 1417 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14787 1290 1417 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14787 Q9Y2V2 41 Q9Y2V2 Q9Y2V2 Calcium-regulated heat stable protein 1 CARHSP1 sp|Q9Y2V2|CHSP1_HUMAN Calcium-regulated heat stable protein 1 OS=Homo sapiens GN=CARHSP1 PE=1 SV=2 0.997096 25.3569 0.00812496 86.467 64.235 86.467 1 S SRERSPSPLRGNVVPSPLPTRRTRTFSATVR Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX GNVVPS(0.997)PLPT(0.003)R GNVVPS(25.36)PLPT(-25.36)R 6 2 0.028356 52319 0 0 65060 0 0 53208 0 0 64036 0 0 68907 0 0 56618 0 0 66559 0 0 63193 0 0 67773 0 0 18832 0 0 49511 0 0 61454 0 0 53715 0 0 65694 0 0 68968 0 0 57200 0 0 67897 0 0 63700 0 0 66820 0 0 19195 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 367640000 367640000 0 0 NaN 4166 2256 41 41 1138;1535;1536 1198;1617;1618 1746;1747 1939;1940 1746 1939 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13770 1746 1939 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13770 1746 1939 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13770 Q9Y2V2 26 Q9Y2V2 Q9Y2V2 Calcium-regulated heat stable protein 1 CARHSP1 sp|Q9Y2V2|CHSP1_HUMAN Calcium-regulated heat stable protein 1 OS=Homo sapiens GN=CARHSP1 PE=1 SV=2 0.698118 3.72873 0.00734265 50.627 36.945 50.627 1 S PPTHQASVGLLDTPRSRERSPSPLRGNVVPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY) PPPPPPPPPPPPPPPPPXXXXXXXXXXXXXX SSEPPPPPQPPT(0.002)HQAS(0.004)VGLLDT(0.296)PRS(0.698)R S(-44.66)S(-44.66)EPPPPPQPPT(-25.27)HQAS(-22.51)VGLLDT(-3.73)PRS(3.73)R 25 3 0.21314 3009.3 0 0 3719.2 0 0 3092.4 0 0 4112 0 0 4031.4 0 0 2406.6 0 0 3063.7 0 0 3851.1 0 0 3908.7 0 0 9350 0 0 2847.9 0 0 3515.6 0 0 3118.8 0 0 4170.7 0 0 4022.7 0 0 2524.1 0 0 3188.2 0 0 4088.7 0 0 3820.9 0 0 8893.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10952000 10952000 0 0 NaN 4167 2256 26 26 4336 4622 4925 5469 4925 5469 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13928 4925 5469 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13928 4925 5469 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13928 Q9Y2V2 52 Q9Y2V2 Q9Y2V2 Calcium-regulated heat stable protein 1 CARHSP1 sp|Q9Y2V2|CHSP1_HUMAN Calcium-regulated heat stable protein 1 OS=Homo sapiens GN=CARHSP1 PE=1 SV=2 0.613775 2.60598 0.0143794 80.755 44.36 80.755 1 S NVVPSPLPTRRTRTFSATVRASQGPVYKGVC X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX T(0.049)FS(0.614)AT(0.337)VR T(-10.94)FS(2.61)AT(-2.61)VR 3 2 -0.59759 43801 0 0 32788 0 0 41000 0 0 31357 0 0 19065 0 0 39660 0 0 21254 0 0 30933 0 0 31527 0 0 4812.8 0 0 41436 0 0 30966 0 0 41181 0 0 32417 0 0 20683 0 0 39282 0 0 21811 0 0 31511 0 0 30672 0 0 5247.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 910150000 910150000 0 0 NaN 4168 2256 52 52 4711 5022 5349 5944 5349 5944 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11954 5349 5944 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11954 5349 5944 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11954 Q9Y2W1 243 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 THRAP3 sp|Q9Y2W1|TR150_HUMAN Thyroid hormone receptor-associated protein 3 OS=Homo sapiens GN=THRAP3 PE=1 SV=2 0.999996 53.6501 0.000188814 123.2 83.05 123.2 1 S YGTGSASRASAVSELSPRERSPALKSPLQSV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX ASAVSELS(1)PR AS(-92.65)AVS(-53.65)ELS(53.65)PR 8 2 -0.22009 63012 0 0 64282 0 0 63481 0 0 63180 0 0 82908 0 0 62303 0 0 89124 0 0 70816 0 0 65818 0 0 46627 0 0 59628 0 0 60718 0 0 64144 0 0 64924 0 0 83054 0 0 62683 0 0 89784 0 0 72108 0 0 65931 0 0 45544 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 3171900000 3171900000 0 0 NaN 4169 2257 243 243 437 466 501 561;562 501 561 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10897 501 561 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10897 501 561 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10897 Q9Y2W1 753 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 THRAP3 sp|Q9Y2W1|TR150_HUMAN Thyroid hormone receptor-associated protein 3 OS=Homo sapiens GN=THRAP3 PE=1 SV=2 1 86.7801 2.39031E-05 136.99 100.68 136.99 1 S RESVDSRDSSHSRERSAEKTEKTHKGSKKQK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX ERS(1)AEKTEK ERS(86.78)AEKT(-86.78)EK 3 4 1.2394 78747 0 0 90645 0 0 78385 0 0 90905 0 0 93826 0 0 76472 0 0 104880 0 0 98341 0 0 101640 0 0 7470.5 0 0 74514 0 0 85630 0 0 79160 0 0 93091 0 0 94457 0 0 77584 0 0 106140 0 0 98021 0 0 100430 0 0 9310.3 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 124840000 124840000 0 0 NaN 4170 2257 753 753 1130;3576 1189;3799 1279;4052 1406;4507 1279 1406 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6210 1279 1406 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6210 1279 1406 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6210 Q9Y2W1 248 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 THRAP3 sp|Q9Y2W1|TR150_HUMAN Thyroid hormone receptor-associated protein 3 OS=Homo sapiens GN=THRAP3 PE=1 SV=2 1 65.2521 3.09449E-07 160.36 134.49 65.252 1;2 S ASRASAVSELSPRERSPALKSPLQSVVVRRR X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX ERS(1)PALK ERS(65.25)PALK 3 2 0.10741 89416 29580 0 90380 37001 0 89647 28154 0 89781 35637 0 136520 30217 0 89135 28035 0 147000 28827 0 113800 34615 0 95649 38862 0 18161 22220 0 84612 27985 0 85376 34946 0 90850 28455 0 92211 36552 0 135870 30532 0 89717 28565 0 147720 29685 0 113740 35136 0 96555 37920 0 19734 21724 0 3 2 0 3 2 0 3 2 0 3 2 0 3 2 0 3 2 0 3 2 0 3 2 0 3 2 0 3 2 0 1764300000 1546400000 217900000 0 NaN 4171 2257 248 248 1135;1136;4075 1194;1195;1196;4345 1284;1285;1286;1287;1288 1411;1412;1413;1414;1415 1285 1412 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8096 1288 1415 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16119 1288 1415 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16119 Q9Y2W1 253 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 THRAP3 sp|Q9Y2W1|TR150_HUMAN Thyroid hormone receptor-associated protein 3 OS=Homo sapiens GN=THRAP3 PE=1 SV=2 0.999792 36.8225 3.09449E-07 160.36 134.49 122.34 1;2 S AVSELSPRERSPALKSPLQSVVVRRRSPRPS X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPXXXXXXX ERS(1)PALKS(1)PLQSVVVR ERS(93.95)PALKS(36.82)PLQS(-36.82)VVVR 8 4 -0.34227 11618 29580 0 16779 37001 0 14416 28154 0 17627 35637 0 14788 30217 0 10764 28035 0 17237 28827 0 14793 34615 0 17007 38862 0 7706.6 22220 0 11004 27985 0 15856 34946 0 14364 28455 0 17937 36552 0 15019 30532 0 11161 28565 0 17422 29685 0 14914 35136 0 16790 37920 0 7599.1 21724 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 337180000 119280000 217900000 0 NaN 4172 2257 253 253 1136;4075 1195;1196;4345 1287;1288;4635 1414;1415;5148 1287 1414 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15935 1288 1415 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16119 1288 1415 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16119 Q9Y2W1 379 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 THRAP3 sp|Q9Y2W1|TR150_HUMAN Thyroid hormone receptor-associated protein 3 OS=Homo sapiens GN=THRAP3 PE=1 SV=2 0.989558 20.0704 1.6006E-11 208.88 173.99 208.88 1 S QTNTDKEKIKEKGSFSDTGLGDGKMKSDSFA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX GS(0.001)FS(0.99)DT(0.01)GLGDGK GS(-31.47)FS(20.07)DT(-20.07)GLGDGK 4 2 -0.14538 61276 0 0 83279 0 0 59603 0 0 81605 0 0 203750 0 0 59966 0 0 195960 0 0 111080 0 0 94282 0 0 58288 0 0 57977 0 0 78661 0 0 61863 0 0 83544 0 0 198050 0 0 61823 0 0 197060 0 0 111200 0 0 97340 0 0 57456 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 45312000 45312000 0 0 NaN 4173 2257 379 379 1604 1690 1826 2029;2030;2031 1826 2029 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14927 1826 2029 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14927 1826 2029 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14927 Q9Y2W1 408 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 THRAP3 sp|Q9Y2W1|TR150_HUMAN Thyroid hormone receptor-associated protein 3 OS=Homo sapiens GN=THRAP3 PE=1 SV=2 0.999988 49.2134 0.00906827 91.549 54.529 91.549 1 S FAPKTDSEKPFRGSQSPKRYKLRDDFEKKMA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX GSQS(1)PKR GS(-49.21)QS(49.21)PKR 4 2 0.30291 9588.3 0 0 11495 0 0 8721.8 0 0 10898 0 0 13994 0 0 9249.5 0 0 14462 0 0 13218 0 0 12662 0 0 2192.2 0 0 9069.8 0 0 10856 0 0 8897.6 0 0 11200 0 0 13895 0 0 9398.7 0 0 14649 0 0 13171 0 0 12570 0 0 2370.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27710000 27710000 0 0 NaN 4174 2257 408 408 1630 1717 1856 2069 1856 2069 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5017 1856 2069 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5017 1856 2069 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5017 Q9Y2W1 682 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 THRAP3 sp|Q9Y2W1|TR150_HUMAN Thyroid hormone receptor-associated protein 3 OS=Homo sapiens GN=THRAP3 PE=1 SV=2 0.99949 32.9586 2.9356E-09 193.87 104.92 193.87 1 S AKNKKSPEIHRRIDISPSTFRKHGLAHDEMK X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX IDIS(0.999)PS(0.001)TFR IDIS(32.96)PS(-32.96)T(-53.89)FR 4 2 0.044141 82313 0 0 114940 0 0 84103 0 0 103320 0 0 156350 0 0 86713 0 0 152130 0 0 123540 0 0 107610 0 0 45389 0 0 77895 0 0 108520 0 0 85461 0 0 106520 0 0 154300 0 0 88205 0 0 153840 0 0 123860 0 0 108070 0 0 45598 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 1211600000 1211600000 0 0 NaN 4175 2257 682 682 1792;1793;3272;3273 1892;1893;3472;3473 2039;2040;3709;3710 2273;2274;2275;4120;4121;4122 2039 2274 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19476 2039 2274 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19476 2039 2274 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19476 Q9Y2W1 672 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 THRAP3 sp|Q9Y2W1|TR150_HUMAN Thyroid hormone receptor-associated protein 3 OS=Homo sapiens GN=THRAP3 PE=1 SV=2 1 81.9717 0.000304087 111.31 89.849 81.972 1 S YLKRGTEQEAAKNKKSPEIHRRIDISPSTFR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX S(1)PEIHRR S(81.97)PEIHRR 1 3 -0.56868 81678 0 0 98629 0 0 89838 0 0 95613 0 0 143020 0 0 86909 0 0 155100 0 0 109920 0 0 101980 0 0 13005 0 0 77319 0 0 93154 0 0 90667 0 0 98217 0 0 142110 0 0 87815 0 0 155840 0 0 109760 0 0 102880 0 0 14790 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 488130000 488130000 0 0 NaN 4176 2257 672 672 2218;2836;4091 2344;3006;4362 2525;3219;4652 2820;3572;5165 4652 5165 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5082 3219 3572 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6570 3219 3572 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6570 Q9Y2W1 919 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 THRAP3 sp|Q9Y2W1|TR150_HUMAN Thyroid hormone receptor-associated protein 3 OS=Homo sapiens GN=THRAP3 PE=1 SV=2 0.70961 4.67305 0.0138371 71.159 23.972 71.159 1 S FPRGRGRFMFRKSSTSPKWAHDKFSGEEGEI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX KS(0.003)S(0.045)T(0.242)S(0.71)PK KS(-23.09)S(-11.98)T(-4.67)S(4.67)PK 5 3 0.77448 32123 0 0 35953 0 0 34124 0 0 38675 0 0 33957 0 0 32260 0 0 33281 0 0 37857 0 0 44346 0 0 5554.6 0 0 30404 0 0 33979 0 0 34242 0 0 39441 0 0 34470 0 0 32703 0 0 34213 0 0 37924 0 0 43287 0 0 6106.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 39844000 39844000 0 0 NaN 4177 2257 919 919 2236 2364 2545 2842 2545 2842 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6641 2545 2842 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6641 2545 2842 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6641 Q9Y2W1 575 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 THRAP3 sp|Q9Y2W1|TR150_HUMAN Thyroid hormone receptor-associated protein 3 OS=Homo sapiens GN=THRAP3 PE=1 SV=2 0.999997 54.5809 1.63954E-07 146.2 121.9 146.2 1 S SFSITREAQVNVRMDSFDEDLARPSGLLAQE Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP MDS(1)FDEDLARPSGLLAQER MDS(54.58)FDEDLARPS(-54.58)GLLAQER 3 3 -1.3084 7346.4 0 0 5024.6 0 0 7895.2 0 0 6295.9 0 0 7390.9 0 0 7139 0 0 6526.3 0 0 8271.5 0 0 5263.8 0 0 41536 0 0 6953.6 0 0 4753.8 0 0 7910.6 0 0 6400.4 0 0 7516.7 0 0 7210.6 0 0 6650.1 0 0 9504.6 0 0 5247.3 0 0 39302 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24916000 24916000 0 0 NaN 4178 2257 575 575 2677 2829 3034 3379 3034 3379 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20621 3034 3379 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20621 3034 3379 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20621 Q9Y2W1 320 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 THRAP3 sp|Q9Y2W1|TR150_HUMAN Thyroid hormone receptor-associated protein 3 OS=Homo sapiens GN=THRAP3 PE=1 SV=2 0.953467 15.3304 1.49441E-17 217.83 194.54 136.71 1 S GSGSLSPSKKSPVGKSPPSTGSTYGSSQKEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP SPVGKS(0.953)PPS(0.018)T(0.028)GSTYGSSQK S(-35.24)PVGKS(15.33)PPS(-17.23)T(-15.33)GS(-38.5)T(-38.41)Y(-89.63)GS(-74.1)S(-80.46)QK 6 3 0.0059166 21959 0 0 21315 0 0 23474 0 0 20833 0 0 31614 0 0 24806 0 0 37103 0 0 27607 0 0 24403 0 0 32429 0 0 20784 0 0 20133 0 0 23660 0 0 21484 0 0 31667 0 0 24783 0 0 37156 0 0 28560 0 0 24617 0 0 31175 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 50688000 50688000 0 0 NaN 4179 2257 320 320 4150;4207 4424;4484 4715;4778 5234;5304 4778 5304 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11250 4715 5234 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11895 4715 5234 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11895 Q9Y2W1 622 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 THRAP3 sp|Q9Y2W1|TR150_HUMAN Thyroid hormone receptor-associated protein 3 OS=Homo sapiens GN=THRAP3 PE=1 SV=2 0.955122 13.2803 3.45438E-12 211.75 176.44 211.75 1 S FRSIFQHIQSAQSQRSPSELFAQHIVTIVHH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.955)PS(0.045)ELFAQHIVTIVHHVK S(13.28)PS(-13.28)ELFAQHIVT(-148.92)IVHHVK 1 4 -0.90923 2807.1 0 0 2432.2 0 0 2476.5 0 0 2308.4 0 0 2078.6 0 0 2252.8 0 0 1944 0 0 2220.5 0 0 2610.4 0 0 3233.5 0 0 2655 0 0 2296.9 0 0 2507.6 0 0 2376.9 0 0 2131.6 0 0 2266.3 0 0 2003.6 0 0 2326 0 0 2547.4 0 0 3096.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16133000 16133000 0 0 NaN 4180 2257 622 622 4171 4446 4738 5257 4738 5257 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22445 4738 5257 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22445 4738 5257 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22445 Q9Y2W1 560 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 THRAP3 sp|Q9Y2W1|TR150_HUMAN Thyroid hormone receptor-associated protein 3 OS=Homo sapiens GN=THRAP3 PE=1 SV=2 0.843858 7.3276 4.52303E-05 145.72 38.149 145.72 1 S RDKLGAKGDFPTGKSSFSITREAQVNVRMDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY) XXXXXXXXXXXXXXPPPPPPPXXXXXXXXXX S(0.156)S(0.844)FSITR S(-7.33)S(7.33)FS(-53.87)IT(-107.56)R 2 2 -0.15421 17128 0 0 15994 0 0 17034 0 0 15149 0 0 17363 0 0 14636 0 0 17712 0 0 16506 0 0 16261 0 0 2739.3 0 0 16207 0 0 15104 0 0 17163 0 0 15598 0 0 17605 0 0 14722 0 0 17973 0 0 16567 0 0 16106 0 0 2961.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24934000 24934000 0 0 NaN 4181 2257 560 560 4342 4628 4931 5475 4931 5475 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12755 4931 5475 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12755 4931 5475 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12755 Q9Y2W1 535 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 THRAP3 sp|Q9Y2W1|TR150_HUMAN Thyroid hormone receptor-associated protein 3 OS=Homo sapiens GN=THRAP3 PE=1 SV=2 0.997805 26.7 0.000395144 125.71 90.489 125.71 1 S NFRVTAYKAVQEKSSSPPPRKTSESRDKLGA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX SS(0.002)S(0.998)PPPRK S(-42.07)S(-26.7)S(26.7)PPPRK 3 3 0.20573 44296 0 0 50720 0 0 44732 0 0 51199 0 0 69230 0 0 45681 0 0 69641 0 0 58477 0 0 56026 0 0 13277 0 0 41917 0 0 47916 0 0 45318 0 0 52452 0 0 68802 0 0 46220 0 0 70496 0 0 58561 0 0 55858 0 0 13856 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 148930000 148930000 0 0 NaN 4182 2257 535 535 4447 4738 5043 5593;5594;5595 5043 5594 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5714 5043 5594 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5714 5043 5594 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5714 Q9Y2X3 502 Q9Y2X3 Q9Y2X3 Nucleolar protein 58 NOP58 sp|Q9Y2X3|NOP58_HUMAN Nucleolar protein 58 OS=Homo sapiens GN=NOP58 PE=1 SV=1 1 77.9475 1.26841E-13 212.28 186.07 149.64 1;2 S KKKRGKKKHIKEEPLSEEEPCTSTAIASPEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPPP EEPLS(1)EEEPCTSTAIASPEK EEPLS(77.95)EEEPCT(-77.95)S(-86.97)T(-98.3)AIAS(-125.92)PEK 5 3 -0.97031 18139 16372 0 24269 18647 0 18926 16329 0 23031 18695 0 34479 17012 0 18758 16195 0 35392 16571 0 27101 18021 0 26339 21208 0 28936 18703 0 17167 15492 0 22919 17616 0 19204 16453 0 23655 19152 0 34076 17221 0 19152 16403 0 35734 17016 0 27733 18569 0 26372 20729 0 27874 18028 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 149410000 134200000 15210000 0 NaN 4183 2258 502 502 931;1719;1720 985;1813;1814 1069;1958;1959 1181;2182;2183;2184 1069 1181 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15464 1958 2182 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14328 1958 2182 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14328 Q9Y2X3 514 Q9Y2X3 Q9Y2X3 Nucleolar protein 58 NOP58 sp|Q9Y2X3|NOP58_HUMAN Nucleolar protein 58 OS=Homo sapiens GN=NOP58 PE=1 SV=1 0.908895 10.3773 1.22335E-07 145.01 128.74 145.01 2 S EPLSEEEPCTSTAIASPEKKKKKKKKRENED X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX HIKEEPLS(1)EEEPCTS(0.008)T(0.083)AIAS(0.909)PEKK HIKEEPLS(55.26)EEEPCT(-44.6)S(-20.69)T(-10.38)AIAS(10.38)PEKK 20 5 -0.23589 0 16372 0 0 18647 0 0 16329 0 0 18695 0 0 17012 0 0 16195 0 0 16571 0 0 18021 0 0 21208 0 0 18703 0 0 15492 0 0 17616 0 0 16453 0 0 19152 0 0 17221 0 0 16403 0 0 17016 0 0 18569 0 0 20729 0 0 18028 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 15210000 0 15210000 0 NaN 4184 2258 514 514 931;1719;1720 985;1813;1814 1959 2183;2184 1959 2183 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14153 1959 2183 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14153 1959 2183 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14153 Q9Y2X3 109 Q9Y2X3 Q9Y2X3 Nucleolar protein 58 NOP58 sp|Q9Y2X3|NOP58_HUMAN Nucleolar protein 58 OS=Homo sapiens GN=NOP58 PE=1 SV=1 0.961608 13.9875 0.0120357 68.569 43.25 68.569 1 S LGGVIKEKLNLSCIHSPVVNELMRGIRSQMD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPXXXXXXX LNLS(0.038)CIHS(0.962)PVVNELMR LNLS(-13.99)CIHS(13.99)PVVNELMR 8 3 0.72314 3831.7 0 0 3960.8 0 0 4101.1 0 0 4071.9 0 0 4329.3 0 0 4159.5 0 0 4885.3 0 0 4226.9 0 0 4261.5 0 0 19950 0 0 3626.8 0 0 3742.2 0 0 4117.9 0 0 4175.5 0 0 4387.2 0 0 4203.7 0 0 4929 0 0 4838.4 0 0 4231.3 0 0 18883 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6587300 6587300 0 0 NaN 4185 2258 109 109 2478 2617 2811 3138 2811 3138 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21363 2811 3138 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21363 2811 3138 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21363 Q9Y2X3 351 Q9Y2X3 Q9Y2X3 Nucleolar protein 58 NOP58 sp|Q9Y2X3|NOP58_HUMAN Nucleolar protein 58 OS=Homo sapiens GN=NOP58 PE=1 SV=1 0.790702 5.7725 1.52701E-05 134.52 104.88 134.52 1 S PKYGLIYHASLVGQTSPKHKGKISRMLAAKT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPXXXXXXXXXXXXX YGLIYHASLVGQT(0.209)S(0.791)PK Y(-118.88)GLIY(-112.04)HAS(-63.44)LVGQT(-5.77)S(5.77)PK 14 3 0.5674 3587.5 0 0 4501.8 0 0 4023.3 0 0 4193.1 0 0 3947.7 0 0 4258.6 0 0 5530.8 0 0 4382.6 0 0 4077 0 0 63869 0 0 3396.3 0 0 4250.9 0 0 4028.2 0 0 4325.3 0 0 4031.6 0 0 4387.5 0 0 5514.1 0 0 6315.8 0 0 4084.4 0 0 60242 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9664600 9664600 0 0 NaN 4186 2258 351 351 5379 5730 6113 6798 6113 6798 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18870 6113 6798 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18870 6113 6798 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18870 Q9Y2X7 414 Q9Y2X7 Q9Y2X7 ARF GTPase-activating protein GIT1 GIT1 sp|Q9Y2X7|GIT1_HUMAN ARF GTPase-activating protein GIT1 OS=Homo sapiens GN=GIT1 PE=1 SV=2 0.410362 1.05079 3.1512E-05 122.49 99.388 122.49 S STGATRSNRARSMDSSDLSDGAVTLQEYLEL X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP S(0.254)MDS(0.322)S(0.41)DLS(0.014)DGAVTLQEYLELK S(-2.09)MDS(-1.05)S(1.05)DLS(-14.76)DGAVT(-66.34)LQEY(-101.29)LELK 5 3 -2.5982 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4187 2259 414 414 4026 4291 4579 5087 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23745 4579 5087 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23745 4579 5087 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23745 Q9Y2X9 651 Q9Y2X9 Q9Y2X9 Zinc finger protein 281 ZNF281 sp|Q9Y2X9|ZN281_HUMAN Zinc finger protein 281 OS=Homo sapiens GN=ZNF281 PE=1 SV=1 0.99995 43.0048 7.57062E-12 186.23 159.18 186.23 1 S HTSGEHSELVQEENLSPGTQTPSNDKASMLQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPXXXXX VDLHTSGEHSELVQEENLS(1)PGTQTPSNDK VDLHT(-90.67)S(-91.13)GEHS(-84.66)ELVQEENLS(43)PGT(-43)QT(-79.6)PS(-95.6)NDK 19 4 0.67467 6500.5 0 0 7234.1 0 0 6567.7 0 0 7236.3 0 0 7854.8 0 0 7490.1 0 0 7925.2 0 0 7517.1 0 0 8234.3 0 0 45638 0 0 6151.4 0 0 6833.8 0 0 6625.3 0 0 7433.9 0 0 7896.3 0 0 7582.6 0 0 8072.2 0 0 8914.3 0 0 8111.7 0 0 43148 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 13877000 13877000 0 0 NaN 4188 2260 651 651 5073 5408 5760 6401;6402 5760 6402 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14057 5760 6402 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14057 5760 6402 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14057 Q9Y2Y9 162 Q9Y2Y9 Q9Y2Y9 Krueppel-like factor 13 KLF13 sp|Q9Y2Y9|KLF13_HUMAN Krueppel-like factor 13 OS=Homo sapiens GN=KLF13 PE=1 SV=1 1 58.0403 0.0221381 58.04 35.162 58.04 1 S LRQRVRRGRSRADLESPQRKHKCHYAGCEKV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX ADLES(1)PQRK ADLES(58.04)PQRK 5 3 -0.7588 16348 0 0 7778.5 0 0 15348 0 0 7305.7 0 0 10325 0 0 15346 0 0 11084 0 0 11547 0 0 7426.3 0 0 2252 0 0 15465 0 0 7345.4 0 0 15452 0 0 7659.3 0 0 10782 0 0 14980 0 0 11146 0 0 11798 0 0 7482.7 0 0 2387.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11535000 11535000 0 0 NaN 4189 2261 162 162 111 119 128 142 128 142 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8953 128 142 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8953 128 142 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8953 Q9Y383 18 Q9Y383 Q9Y383 Putative RNA-binding protein Luc7-like 2 LUC7L2 sp|Q9Y383|LC7L2_HUMAN Putative RNA-binding protein Luc7-like 2 OS=Homo sapiens GN=LUC7L2 PE=1 SV=2 0.989825 19.8805 4.29813E-07 164.65 137.55 87.914 1 S AQAQMRAMLDQLMGTSRDGDTTRQRIKFSDD X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPXXXXXXXXXXXXXX AMLDQLMGT(0.01)S(0.99)R AMLDQLMGT(-19.88)S(19.88)R 10 2 -0.29186 25063 0 0 74634 0 0 28598 0 0 76310 0 0 27408 0 0 28222 0 0 26963 0 0 50338 0 0 91906 0 0 68732 0 0 23729 0 0 70514 0 0 28578 0 0 77478 0 0 27939 0 0 30842 0 0 29245 0 0 51707 0 0 87929 0 0 65885 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 180930000 180930000 0 0 NaN 4190 2262 18 18 334 356;357 383;384;385 424;425;426 384 425 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17539 385 426 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22053 385 426 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22053 Q9Y383 347 Q9Y383 Q9Y383 Putative RNA-binding protein Luc7-like 2 LUC7L2 sp|Q9Y383|LC7L2_HUMAN Putative RNA-binding protein Luc7-like 2 OS=Homo sapiens GN=LUC7L2 PE=1 SV=2 1 144.883 1.06259E-06 144.88 121.13 144.88 1 S KRRSSKERFRDQDLASCDRDRSSRDRSPRDR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX FRDQDLAS(1)CDR FRDQDLAS(144.88)CDR 8 2 0.3977 13267 0 0 14630 0 0 11815 0 0 13730 0 0 23113 0 0 12271 0 0 24548 0 0 17204 0 0 14541 0 0 15689 0 0 12548 0 0 13816 0 0 12122 0 0 14129 0 0 22799 0 0 12457 0 0 24645 0 0 17538 0 0 14772 0 0 15171 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10740000 10740000 0 0 NaN 4191 2262 347 347 1312 1383 1489 1651 1489 1651 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10256 1489 1651 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10256 1489 1651 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10256 Q9Y388 188 Q9Y388 Q9Y388 RNA-binding motif protein, X-linked 2 RBMX2 sp|Q9Y388|RBMX2_HUMAN RNA-binding motif protein, X-linked 2 OS=Homo sapiens GN=RBMX2 PE=1 SV=2 0.999951 43.1175 4.92317E-16 236.67 173.98 236.67 1 S EKADREVQAEQPSSSSPRRKTVKEKDDTGPK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPXXXXXXXXXXXXX EVQAEQPSSSS(1)PR EVQAEQPS(-96.37)S(-70.21)S(-43.12)S(43.12)PR 11 2 0.77205 25093 0 0 29128 0 0 26213 0 0 28233 0 0 27247 0 0 22823 0 0 27477 0 0 27783 0 0 31136 0 0 4158.4 0 0 23749 0 0 27511 0 0 26344 0 0 28957 0 0 27596 0 0 23188 0 0 28058 0 0 27801 0 0 30567 0 0 4558.6 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 120350000 120350000 0 0 NaN 4192 2264 188 188 117;1216 123;1279 132;1378 147;1529 1378 1529 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6823 1378 1529 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6823 1378 1529 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6823 Q9Y3A2 241 Q9Y3A2 Q9Y3A2 Probable U3 small nucleolar RNA-associated protein 11 UTP11L sp|Q9Y3A2|UTP11_HUMAN Probable U3 small nucleolar RNA-associated protein 11 OS=Homo sapiens GN=UTP11L PE=1 SV=2 0.996809 24.966 0.000191662 122.97 85.244 122.97 1 S MDKTQKVKVKKETVNSPAIYKFQSRRKR___ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX ET(0.003)VNS(0.997)PAIYK ET(-24.97)VNS(24.97)PAIY(-48.59)K 5 2 1.1142 20553 0 0 29163 0 0 21808 0 0 30093 0 0 17371 0 0 21154 0 0 16125 0 0 25072 0 0 31334 0 0 18974 0 0 19453 0 0 27554 0 0 21831 0 0 30698 0 0 17887 0 0 21688 0 0 16891 0 0 25569 0 0 30272 0 0 18447 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11512000 11512000 0 0 NaN 4193 2265 241 241 1199 1261 1360 1507 1360 1507 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13672 1360 1507 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13672 1360 1507 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13672 Q9Y3B9 11 Q9Y3B9 Q9Y3B9 RRP15-like protein RRP15 sp|Q9Y3B9|RRP15_HUMAN RRP15-like protein OS=Homo sapiens GN=RRP15 PE=1 SV=2 0.994197 22.3385 4.65654E-11 131.56 111.82 131.56 1 S _____MAAAAPDSRVSEEENLKKTPKKKMKM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPXXXXXXXX AAAAPDS(0.006)RVS(0.994)EEENLKK AAAAPDS(-22.34)RVS(22.34)EEENLKK 10 3 -0.16574 19020 0 0 24103 0 0 18515 0 0 24100 0 0 18886 0 0 17663 0 0 19727 0 0 22029 0 0 25188 0 0 24687 0 0 17996 0 0 22769 0 0 18679 0 0 24642 0 0 19160 0 0 18093 0 0 20190 0 0 22671 0 0 24621 0 0 23756 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37675000 37675000 0 0 NaN 4194 2266 11 11 3 4 7 14 7 14 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12163 7 14 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12163 7 14 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12163 Q9Y3L3 544 Q9Y3L3 Q9Y3L3 SH3 domain-binding protein 1 SH3BP1 sp|Q9Y3L3|3BP1_HUMAN SH3 domain-binding protein 1 OS=Homo sapiens GN=SH3BP1 PE=1 SV=3 1 69.7397 0.000267335 101.49 73.281 101.49 1 S ATKERTESEVPPRPASPKVTRSPPETAAPVE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPXXXXXXXXXXXXX ERTESEVPPRPAS(1)PK ERT(-70.03)ES(-69.74)EVPPRPAS(69.74)PK 13 3 0.3786 63629 0 0 50575 0 0 63779 0 0 48893 0 0 91009 0 0 62631 0 0 95643 0 0 65741 0 0 51640 0 0 17582 0 0 60210 0 0 47767 0 0 64555 0 0 50525 0 0 90772 0 0 62237 0 0 95929 0 0 66352 0 0 52820 0 0 18077 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 39899000 39899000 0 0 NaN 4195 2268 544 544 1142;4691 1202;5002 1294;5328 1423;5920;5921;5922 1294 1423 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7633 1294 1423 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7633 1294 1423 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7633 Q9Y3L3 585 Q9Y3L3 Q9Y3L3 SH3 domain-binding protein 1 SH3BP1 sp|Q9Y3L3|3BP1_HUMAN SH3 domain-binding protein 1 OS=Homo sapiens GN=SH3BP1 PE=1 SV=3 0.499377 0 6.90894E-08 142.3 119.76 142.3 S PARPTMPPPQVSGSRSSPPAPPLPPGSGSPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.499)S(0.499)PPAPPLPPGS(0.001)GSPGTPQALPR S(0)S(0)PPAPPLPPGS(-26.25)GS(-39.16)PGT(-55.6)PQALPR 1 3 0.2784 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4196 2268 585 585 4388 4675;4676 4979 5526 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15965 4979 5526 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15965 4979 5526 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15965 Q9Y3L3 586 Q9Y3L3 Q9Y3L3 SH3 domain-binding protein 1 SH3BP1 sp|Q9Y3L3|3BP1_HUMAN SH3 domain-binding protein 1 OS=Homo sapiens GN=SH3BP1 PE=1 SV=3 0.532076 0.563426 6.90894E-08 142.3 119.76 90.518 2 S ARPTMPPPQVSGSRSSPPAPPLPPGSGSPGT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP S(0.468)S(0.532)PPAPPLPPGS(0.212)GS(0.492)PGT(0.295)PQALPR S(-0.56)S(0.56)PPAPPLPPGS(-3.65)GS(2.22)PGT(-2.22)PQALPR 2 3 0.25865 0 4158.9 0 0 5226.3 0 0 5161 0 0 4986.9 0 0 5246.9 0 0 4173.1 0 0 5945.8 0 0 6306.8 0 0 5247.4 0 0 30580 0 0 3939.2 0 0 4935.7 0 0 5141.6 0 0 5121.9 0 0 5328.7 0 0 4303.6 0 0 5999.7 0 0 7164.9 0 0 5207.2 0 0 28941 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 14640000 0 14640000 0 NaN 4197 2268 586 586 4388 4675;4676 4980 5527 4980 5527 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16671 4979 5526 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15965 4979 5526 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15965 Q9Y3L3 598 Q9Y3L3 Q9Y3L3 SH3 domain-binding protein 1 SH3BP1 sp|Q9Y3L3|3BP1_HUMAN SH3 domain-binding protein 1 OS=Homo sapiens GN=SH3BP1 PE=1 SV=3 0.492122 2.2244 0.00593016 90.518 71.128 90.518 S SRSSPPAPPLPPGSGSPGTPQALPRRLVGSS X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPPPPPXXXXXX S(0.468)S(0.532)PPAPPLPPGS(0.212)GS(0.492)PGT(0.295)PQALPR S(-0.56)S(0.56)PPAPPLPPGS(-3.65)GS(2.22)PGT(-2.22)PQALPR 14 3 0.25865 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4198 2268 598 598 4388 4675;4676 4980 5527 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16671 4980 5527 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16671 4980 5527 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16671 Q9Y3L3 550 Q9Y3L3 Q9Y3L3 SH3 domain-binding protein 1 SH3BP1 sp|Q9Y3L3|3BP1_HUMAN SH3 domain-binding protein 1 OS=Homo sapiens GN=SH3BP1 PE=1 SV=3 0.904455 9.77148 2.82562E-05 128.01 99.811 128.01 1 S ESEVPPRPASPKVTRSPPETAAPVEDMARRT X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPXX VT(0.095)RS(0.904)PPETAAPVEDMAR VT(-9.77)RS(9.77)PPET(-36.28)AAPVEDMAR 4 3 -1.4308 45842 0 0 40770 0 0 53484 0 0 42938 0 0 41779 0 0 47784 0 0 42691 0 0 45531 0 0 47076 0 0 17242 0 0 43407 0 0 38526 0 0 53274 0 0 44033 0 0 43106 0 0 47684 0 0 43532 0 0 46278 0 0 46263 0 0 17289 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 45685000 45685000 0 0 NaN 4199 2268 550 550 5296 5643 6015 6681;6682 6015 6682 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12715 6015 6682 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12715 6015 6682 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12715 Q9Y3Q8 279 Q9Y3Q8 Q9Y3Q8 TSC22 domain family protein 4 TSC22D4 sp|Q9Y3Q8|T22D4_HUMAN TSC22 domain family protein 4 OS=Homo sapiens GN=TSC22D4 PE=1 SV=2 1 107.602 0.000126764 107.6 61.629 107.6 1 S SPALYFTHDASLVHKSPDPFGAVAAQKFSLA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(1)PDPFGAVAAQK S(107.6)PDPFGAVAAQK 1 3 1.0806 5129.2 0 0 9814.4 0 0 6074.6 0 0 10227 0 0 4993.9 0 0 6393.3 0 0 3884.1 0 0 7156.1 0 0 10086 0 0 3303 0 0 4857 0 0 9273.7 0 0 6047.1 0 0 10414 0 0 5121.8 0 0 6595.2 0 0 4176.8 0 0 7248 0 0 9689 0 0 3275.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7067600 7067600 0 0 NaN 4200 2269 279 279 4083 4353 4643 5156 4643 5156 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17570 4643 5156 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17570 4643 5156 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17570 Q9Y3T9 49 Q9Y3T9 Q9Y3T9 Nucleolar complex protein 2 homolog NOC2L sp|Q9Y3T9|NOC2L_HUMAN Nucleolar complex protein 2 homolog OS=Homo sapiens GN=NOC2L PE=1 SV=4 1 66.9721 8.63145E-05 111.84 74.211 111.84 1;2 S NSPQAETREAREAARSPDKPGGSPSASRRKG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPXXX EAARS(1)PDKPGGS(0.236)PS(0.587)AS(0.177)R EAARS(66.97)PDKPGGS(-3.96)PS(3.96)AS(-5.21)R 5 3 -0.17258 31996 51256 0 24279 35888 0 32385 50539 0 25527 36178 0 27205 19471 0 33667 50712 0 26732 23434 0 28756 43015 0 28104 40651 0 5317 10122 0 30278 48498 0 22943 33904 0 32523 50559 0 26265 37362 0 27908 21666 0 33332 50105 0 27272 24135 0 29195 43751 0 27672 39380 0 5672.1 10527 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 202770000 115900000 86867000 0 NaN 4201 2270 49 49 861;4080;4081 913;914;4350;4351 990;991;4640 1095;1096;1097;5153 991 1096 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6390 991 1096 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6390 991 1096 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6390 Q9Y3T9 56 Q9Y3T9 Q9Y3T9 Nucleolar complex protein 2 homolog NOC2L sp|Q9Y3T9|NOC2L_HUMAN Nucleolar complex protein 2 homolog OS=Homo sapiens GN=NOC2L PE=1 SV=4 0.762612 7.32869 0.0247285 62.765 47.611 62.765 1 S REAREAARSPDKPGGSPSASRRKGRASEHKD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPXXXXXXXXX SPDKPGGS(0.763)PS(0.096)AS(0.141)RR S(-48.72)PDKPGGS(7.33)PS(-8.99)AS(-7.33)RR 8 3 -1.855 5580.4 0 0 5271.3 0 0 5846 0 0 6800.2 0 0 5068.8 0 0 5924.3 0 0 5955.4 0 0 5387.6 0 0 5775.1 0 0 2695.9 0 0 5281.5 0 0 4988.3 0 0 5863.4 0 0 6874.8 0 0 5202.1 0 0 5975.6 0 0 6014.5 0 0 5506.2 0 0 5706 0 0 2663.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11020000 11020000 0 0 NaN 4202 2270 56 56 861;4080;4081 913;914;4350;4351 4641 5154 4641 5154 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5972 4641 5154 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5972 4641 5154 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5972 Q9Y3T9 58 Q9Y3T9 Q9Y3T9 Nucleolar complex protein 2 homolog NOC2L sp|Q9Y3T9|NOC2L_HUMAN Nucleolar complex protein 2 homolog OS=Homo sapiens GN=NOC2L PE=1 SV=4 0.587158 3.95852 8.63145E-05 111.84 74.211 111.84 2 S AREAARSPDKPGGSPSASRRKGRASEHKDQL X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPXXXXXXXXXXXX EAARS(1)PDKPGGS(0.236)PS(0.587)AS(0.177)R EAARS(66.97)PDKPGGS(-3.96)PS(3.96)AS(-5.21)R 14 3 -0.17258 0 51256 0 0 35888 0 0 50539 0 0 36178 0 0 19471 0 0 50712 0 0 23434 0 0 43015 0 0 40651 0 0 10122 0 0 48498 0 0 33904 0 0 50559 0 0 37362 0 0 21666 0 0 50105 0 0 24135 0 0 43751 0 0 39380 0 0 10527 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 86867000 0 86867000 0 NaN 4203 2270 58 58 861;4080;4081 913;914;4350;4351 991 1096;1097 991 1096 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6390 991 1096 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6390 991 1096 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6390 Q9Y3X0 202 Q9Y3X0 Q9Y3X0 Coiled-coil domain-containing protein 9 CCDC9 sp|Q9Y3X0|CCDC9_HUMAN Coiled-coil domain-containing protein 9 OS=Homo sapiens GN=CCDC9 PE=1 SV=1 0.999812 37.2529 0.0247808 61.444 23.85 61.444 1 S EPNPVRNFLDDPRRRSGPLEESERDRREESR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX RRS(1)GPLEESER RRS(37.25)GPLEES(-37.25)ER 3 3 -1.4122 5910.4 0 0 5424.4 0 0 4638.3 0 0 6197.7 0 0 8219 0 0 5683.9 0 0 8183.7 0 0 6161.9 0 0 4735.1 0 0 2625.3 0 0 5587.9 0 0 5128.6 0 0 4787.4 0 0 6308.1 0 0 8125.5 0 0 5731.1 0 0 8237.6 0 0 6241.4 0 0 4818.4 0 0 2614.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 4310600 4310600 0 0 NaN 4204 2271 202 202 3442 3656 3898 4327 3898 4327 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5806 3898 4327 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5806 3898 4327 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5806 Q9Y3X0 521 Q9Y3X0 Q9Y3X0 Coiled-coil domain-containing protein 9 CCDC9 sp|Q9Y3X0|CCDC9_HUMAN Coiled-coil domain-containing protein 9 OS=Homo sapiens GN=CCDC9 PE=1 SV=1 0.999994 54.9667 2.8178E-07 145.69 126.86 145.69 1 S VELNSPRTTHLAGALSPGEAWPFESV_____ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPXXXXX TTHLAGALS(1)PGEAWPFESV T(-54.97)T(-54.97)HLAGALS(54.97)PGEAWPFES(-93.35)V 9 2 -0.15571 3945.4 0 0 6503.9 0 0 6782.7 0 0 6309.4 0 0 7506.6 0 0 6386.6 0 0 6121.2 0 0 10285 0 0 5295.4 0 0 90657 0 0 3744 0 0 6142.9 0 0 6672.9 0 0 6491.4 0 0 7554.6 0 0 6617.7 0 0 6274.8 0 0 12897 0 0 5260 0 0 85603 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19178000 19178000 0 0 NaN 4205 2271 521 521 4977 5306 5653 6282 5653 6282 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23699 5653 6282 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23699 5653 6282 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23699 Q9Y3Z3 33 Q9Y3Z3 Q9Y3Z3 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 SAMHD1 sp|Q9Y3Z3|SAMH1_HUMAN Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 OS=Homo sapiens GN=SAMHD1 PE=1 SV=2 0.999442 33.7685 3.43592E-05 121.5 92.847 121.5 1 S SPRTPSNTPSAEADWSPGLELHPDYKTWGPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPPPXXXXX TPSNTPSAEADWS(0.999)PGLELHPDYK T(-50.7)PS(-41.36)NT(-42.48)PS(-33.77)AEADWS(33.77)PGLELHPDY(-96.85)K 13 3 -0.61273 5133.8 0 0 2681.2 0 0 5084.5 0 0 2242.8 0 0 2447.2 0 0 5917.9 0 0 1555.9 0 0 3782 0 0 2681.5 0 0 17985 0 0 4857.7 0 0 2530.3 0 0 5088.7 0 0 2388.6 0 0 2627.6 0 0 5774.9 0 0 1657.4 0 0 4418.3 0 0 2598.1 0 0 17022 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7856900 7856900 0 0 NaN 4206 2272 33 33 4850 5175 5514 6132 5514 6132 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18629 5514 6132 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18629 5514 6132 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18629 Q9Y446 238 Q9Y446 Q9Y446 Plakophilin-3 PKP3 sp|Q9Y446|PKP3_HUMAN Plakophilin-3 OS=Homo sapiens GN=PKP3 PE=1 SV=1 0.982515 17.5303 0.000214273 102.39 86.749 102.39 1 S SSRAGGLDWPEATEVSPSRTIRAPAVRTLQR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPXXXXXXXXXXXX AGGLDWPEATEVS(0.983)PS(0.017)R AGGLDWPEAT(-38.64)EVS(17.53)PS(-17.53)R 13 2 -0.024944 2825.4 0 0 10472 0 0 3312.2 0 0 10462 0 0 3445.9 0 0 2933.6 0 0 3057.9 0 0 6588.4 0 0 12419 0 0 36077 0 0 2675.4 0 0 9892.6 0 0 3308.1 0 0 10622 0 0 3492.3 0 0 3390.3 0 0 3387.6 0 0 7554.1 0 0 11857 0 0 34123 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9885300 9885300 0 0 NaN 4207 2273 238 238 202 211 227 255 227 255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18095 227 255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18095 227 255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18095 Q9Y478 108 Q9Y478 Q9Y478 5'-AMP-activated protein kinase subunit beta-1 PRKAB1 sp|Q9Y478|AAKB1_HUMAN 5'-AMP-activated protein kinase subunit beta-1 OS=Homo sapiens GN=PRKAB1 PE=1 SV=4 1 133.715 6.46352E-11 177.82 153.53 177.82 1 S LSGSFNNWSKLPLTRSHNNFVAILDLPEGEH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(1)HNNFVAILDLPEGEHQYK S(133.72)HNNFVAILDLPEGEHQY(-133.72)K 1 3 0.2394 11891 0 0 12452 0 0 12152 0 0 11831 0 0 11174 0 0 13334 0 0 11770 0 0 13954 0 0 13086 0 0 52235 0 0 11253 0 0 11759 0 0 12210 0 0 12209 0 0 11407 0 0 13404 0 0 11988 0 0 15547 0 0 12856 0 0 49508 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 47847000 47847000 0 0 NaN 4208 2274 108 108 3836 4089 4363;4364 4852;4853 4363 4852 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20628 4363 4852 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20628 4363 4852 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20628 Q9Y4A5 2075 Q9Y4A5 Q9Y4A5 Transformation/transcription domain-associated protein TRRAP sp|Q9Y4A5|TRRAP_HUMAN Transformation/transcription domain-associated protein OS=Homo sapiens GN=TRRAP PE=1 SV=3 0.620811 2.14104 5.89228E-07 142.3 120.25 142.3 1 S RFRTATGAISAVFGRSQSLPGADSLLAKPID X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX S(0.621)QS(0.379)LPGADSLLAK S(2.14)QS(-2.14)LPGADS(-83.63)LLAK 1 3 0.017404 5109.5 0 0 2844 0 0 5284.4 0 0 3877.6 0 0 7213.8 0 0 5557.8 0 0 7113.5 0 0 5843.7 0 0 4458.8 0 0 4279.6 0 0 4835.6 0 0 2692.5 0 0 5334.5 0 0 3945.3 0 0 7202.7 0 0 5507.5 0 0 7173 0 0 5979.6 0 0 4512.1 0 0 4165 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8952900 8952900 0 0 NaN 4209 2276 2075 2075 4237;4238 4515;4516 4812 5342 4812 5342 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19282 4812 5342 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19282 4812 5342 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19282 Q9Y4A5 2077 Q9Y4A5 Q9Y4A5 Transformation/transcription domain-associated protein TRRAP sp|Q9Y4A5|TRRAP_HUMAN Transformation/transcription domain-associated protein OS=Homo sapiens GN=TRRAP PE=1 SV=3 0.988809 21.677 2.20839E-07 156.31 117.42 156.31 1 S RTATGAISAVFGRSQSLPGADSLLAKPIDKQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPX S(0.007)QS(0.989)LPGADS(0.004)LLAKPIDK S(-21.68)QS(21.68)LPGADS(-23.45)LLAKPIDK 3 3 0.33866 13280 0 0 14076 0 0 15200 0 0 13318 0 0 25303 0 0 14159 0 0 25872 0 0 19304 0 0 15001 0 0 20243 0 0 12574 0 0 13293 0 0 15320 0 0 13734 0 0 25079 0 0 14257 0 0 26010 0 0 19774 0 0 15262 0 0 19508 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 67995000 67995000 0 0 NaN 4210 2276 2077 2077 4237;4238 4515;4516 4813 5343 4813 5343 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19784 4813 5343 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19784 4813 5343 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19784 Q9Y4B6 1000 Q9Y4B6 Q9Y4B6 Protein VPRBP VPRBP sp|Q9Y4B6|VPRBP_HUMAN Protein VPRBP OS=Homo sapiens GN=VPRBP PE=1 SV=3 0.999985 48.2679 2.83343E-17 249.49 204.16 249.49 1 S SQSPAIKKQLDRHLPSPPTLDSIITEYLREQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPXX HLPS(1)PPTLDSIITEYLR HLPS(48.27)PPT(-48.27)LDS(-149.21)IIT(-198.18)EY(-232.81)LR 4 3 -0.15248 6811.2 0 0 7203.9 0 0 7118.4 0 0 7555.2 0 0 8255.9 0 0 8460.6 0 0 10318 0 0 8192.7 0 0 8624.1 0 0 24649 0 0 6446.3 0 0 6807.3 0 0 7168 0 0 7750.5 0 0 8338.5 0 0 8483.2 0 0 10357 0 0 8971 0 0 8581.3 0 0 23400 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 117140000 117140000 0 0 NaN 4211 2277 1000 1000 1727 1821 1966 2192 1966 2192 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23976 1966 2192 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23976 1966 2192 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23976 Q9Y4B6 197 Q9Y4B6 Q9Y4B6 Protein VPRBP VPRBP sp|Q9Y4B6|VPRBP_HUMAN Protein VPRBP OS=Homo sapiens GN=VPRBP PE=1 SV=3 1 70.0893 0.0156209 70.089 40.734 70.089 1 S LQLQEVALRQENKRPSPRKLSSEPLLPLDEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX QENKRPS(1)PR QENKRPS(70.09)PR 7 3 0.78367 9667.4 0 0 9499.9 0 0 8955.6 0 0 9822.2 0 0 9072.4 0 0 9409.9 0 0 7363.8 0 0 9181.7 0 0 11604 0 0 1762 0 0 9145.1 0 0 8976.1 0 0 9056.9 0 0 10059 0 0 9179.6 0 0 9450.9 0 0 7693.9 0 0 9271.9 0 0 11270 0 0 1871.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23264000 23264000 0 0 NaN 4212 2277 197 197 3017 3198 3421 3794 3421 3794 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5243 3421 3794 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5243 3421 3794 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5243 Q9Y4E8 229 Q9Y4E8 Q9Y4E8 Ubiquitin carboxyl-terminal hydrolase 15 USP15 sp|Q9Y4E8|UBP15_HUMAN Ubiquitin carboxyl-terminal hydrolase 15 OS=Homo sapiens GN=USP15 PE=1 SV=3 0.984419 18.0062 7.58381E-05 120.13 90.322 120.13 1 S KNEDGTWPRGPSTPKSPGASNFSTLPKISPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(0.984)PGAS(0.016)NFSTLPK S(18.01)PGAS(-18.01)NFS(-58.98)T(-82.12)LPK 1 3 -0.15577 11254 0 0 19850 0 0 11054 0 0 18256 0 0 5911 0 0 11976 0 0 5582.4 0 0 12374 0 0 22929 0 0 2667.5 0 0 10649 0 0 18743 0 0 11079 0 0 18741 0 0 6313.9 0 0 12294 0 0 6173.2 0 0 12477 0 0 21889 0 0 2798.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 91289000 91289000 0 0 NaN 4213 2278 229 229 1568;4099 1652;4370 4660 5174 4660 5174 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15763 4660 5174 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15763 4660 5174 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15763 Q9Y4E8 233 Q9Y4E8 Q9Y4E8 Ubiquitin carboxyl-terminal hydrolase 15 USP15 sp|Q9Y4E8|UBP15_HUMAN Ubiquitin carboxyl-terminal hydrolase 15 OS=Homo sapiens GN=USP15 PE=1 SV=3 0.487931 0.439242 6.94166E-11 183.86 147.28 183.86 S GTWPRGPSTPKSPGASNFSTLPKISPSSLSN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPXXXXXXXX GPS(0.008)T(0.063)PKS(0.441)PGAS(0.488)NFSTLPK GPS(-18.01)T(-8.87)PKS(-0.44)PGAS(0.44)NFS(-39.91)T(-61.66)LPK 11 3 0.81036 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4214 2278 233 233 1568;4099 1652;4370 1786 1984 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15133 1786 1984 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15133 1786 1984 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15133 Q9Y4F3 1093 Q9Y4F3 Q9Y4F3 Meiosis arrest female protein 1 KIAA0430 sp|Q9Y4F3|MARF1_HUMAN Meiosis arrest female protein 1 OS=Homo sapiens GN=KIAA0430 PE=1 SV=6 0.998693 28.8303 1.55168E-10 183.25 154.62 183.25 1 S KPPPPNTDPWLLRSKSPVGNPQLIQFSREVI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX S(0.001)KS(0.999)PVGNPQLIQFSR S(-28.83)KS(28.83)PVGNPQLIQFS(-119.81)R 3 3 0.16953 12193 0 0 10451 0 0 13923 0 0 10739 0 0 12637 0 0 11173 0 0 14074 0 0 11721 0 0 11461 0 0 8781.1 0 0 11544 0 0 9873.9 0 0 13907 0 0 11016 0 0 12918 0 0 11204 0 0 14185 0 0 12000 0 0 11420 0 0 8539.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 96324000 96324000 0 0 NaN 4215 2279 1093 1093 3911 4169 4450 4948 4450 4948 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16008 4450 4948 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16008 4450 4948 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16008 Q9Y4H2 391 Q9Y4H2 Q9Y4H2 Insulin receptor substrate 2 IRS2 sp|Q9Y4H2|IRS2_HUMAN Insulin receptor substrate 2 OS=Homo sapiens GN=IRS2 PE=1 SV=2 0.99986 38.5265 4.67248E-07 154.39 121.66 154.39 1 S AAAGARPVSVAGSPLSPGPVRAPLSRSHTLS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPXXXXXXXXXX PVSVAGSPLS(1)PGPVR PVS(-116.17)VAGS(-38.53)PLS(38.53)PGPVR 10 3 0.98279 4848.3 0 0 3916 0 0 5107.8 0 0 4503 0 0 3261.3 0 0 5244.8 0 0 2971.3 0 0 4091.1 0 0 4390.2 0 0 3053.4 0 0 4588.7 0 0 3702.6 0 0 5105.2 0 0 4599.7 0 0 3415.9 0 0 5215.3 0 0 3077.4 0 0 4240.4 0 0 4271.6 0 0 2969.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7853400 7853400 0 0 NaN 4216 2281 391 391 2991 3170 3393 3763 3393 3763 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16798 3393 3763 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16798 3393 3763 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16798 Q9Y4H2 365 Q9Y4H2 Q9Y4H2 Insulin receptor substrate 2 IRS2 sp|Q9Y4H2|IRS2_HUMAN Insulin receptor substrate 2 OS=Homo sapiens GN=IRS2 PE=1 SV=2 0.999367 31.9802 2.70922E-53 364.38 328.58 364.38 1 S TPPAAKCSSCRVRTASEGDGGAAAGAAAAGA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP T(0.001)AS(0.999)EGDGGAAAGAAAAGAR T(-31.98)AS(31.98)EGDGGAAAGAAAAGAR 3 2 0.67133 15577 0 0 2632.3 0 0 14447 0 0 2682.1 0 0 4901.5 0 0 14170 0 0 5110.7 0 0 7590.6 0 0 3815.9 0 0 3687 0 0 14736 0 0 2486.9 0 0 14495 0 0 2935.5 0 0 5539.4 0 0 13615 0 0 5156.8 0 0 7979.9 0 0 3820 0 0 3647.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10893000 10893000 0 0 NaN 4217 2281 365 365 4623 4931 5253 5835 5253 5835 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8008 5253 5835 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8008 5253 5835 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8008 Q9Y4H2 577 Q9Y4H2 Q9Y4H2 Insulin receptor substrate 2 IRS2 sp|Q9Y4H2|IRS2_HUMAN Insulin receptor substrate 2 OS=Homo sapiens GN=IRS2 PE=1 SV=2 0.961564 14.0281 0.00133391 102.52 56.062 102.52 1 S DAAQDLDRGLRKRTYSLTTPARQRPVPQPSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX T(0.038)YS(0.962)LTTPAR T(-14.03)Y(-69.26)S(14.03)LT(-33.87)T(-51.08)PAR 3 2 -0.10251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4218 2281 577 577 5034 5368 5720 6359 5720 6359 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12198 5720 6359 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12198 5720 6359 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12198 Q9Y4H2 1100 Q9Y4H2 Q9Y4H2 Insulin receptor substrate 2 IRS2 sp|Q9Y4H2|IRS2_HUMAN Insulin receptor substrate 2 OS=Homo sapiens GN=IRS2 PE=1 SV=2 0.997999 27.0198 4.89542E-06 155.53 109.38 155.53 1 S QPIAAPPKPEAARVASPTSGVKRLSLMEQVS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX VAS(0.998)PT(0.002)SGVK VAS(27.02)PT(-27.02)S(-47.22)GVK 3 2 0.17418 61220 0 0 20209 0 0 57360 0 0 20299 0 0 28150 0 0 54781 0 0 29428 0 0 35638 0 0 21362 0 0 8438.2 0 0 57915 0 0 19091 0 0 57625 0 0 21391 0 0 30301 0 0 53146 0 0 29673 0 0 36743 0 0 21420 0 0 8770.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 48562000 48562000 0 0 NaN 4219 2281 1100 1100 5057 5391 5743 6382 5743 6382 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10869 5743 6382 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10869 5743 6382 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10869 Q9Y4H4 35 Q9Y4H4 Q9Y4H4 G-protein-signaling modulator 3 GPSM3 sp|Q9Y4H4|GPSM3_HUMAN G-protein-signaling modulator 3 OS=Homo sapiens GN=GPSM3 PE=1 SV=1 0.999963 44.2858 0.0461993 49.463 34.261 49.463 2 S EEGWPPPNSTTRPWRSAPPSPPPPGTRHTAL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX S(1)APPS(1)PPPPGTR S(44.29)APPS(40.62)PPPPGT(-40.62)R 1 3 -0.33631 0 9797.8 0 0 8067 0 0 8998.3 0 0 8182.5 0 0 9117.8 0 0 9428.6 0 0 7971.6 0 0 9080.1 0 0 8146.9 0 0 2377.1 0 0 9268.3 0 0 7621.3 0 0 9106.1 0 0 8414.5 0 0 9229.6 0 0 9395.3 0 0 8174.3 0 0 9193.2 0 0 8031.1 0 0 2448.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 17336000 0 17336000 0 NaN 4220 2282 35 35 3593 3819;3820 4073 4528 4073 4528 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7632 4073 4528 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7632 4073 4528 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7632 Q9Y4H4 39 Q9Y4H4 Q9Y4H4 G-protein-signaling modulator 3 GPSM3 sp|Q9Y4H4|GPSM3_HUMAN G-protein-signaling modulator 3 OS=Homo sapiens GN=GPSM3 PE=1 SV=1 0.999913 40.6237 0.0355986 49.463 34.261 49.463 1;2 S PPPNSTTRPWRSAPPSPPPPGTRHTALGPRS X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY) XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX S(1)APPS(1)PPPPGTR S(44.29)APPS(40.62)PPPPGT(-40.62)R 5 3 -0.33631 13169 9797.8 0 8792.7 8067 0 13134 8998.3 0 8574 8182.5 0 10834 9117.8 0 11235 9428.6 0 11118 7971.6 0 11311 9080.1 0 8962.3 8146.9 0 2238 2377.1 0 12461 9268.3 0 8304.9 7621.3 0 13199 9106.1 0 8859.7 8414.5 0 11132 9229.6 0 11148 9395.3 0 11245 8174.3 0 11410 9193.2 0 8934.5 8031.1 0 2369.1 2448.5 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 36535000 19199000 17336000 0 NaN 4221 2282 39 39 3593 3819;3820 4072;4073 4527;4528 4073 4528 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7632 4073 4528 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7632 4072 4527 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7320 Q9Y4H4 54 Q9Y4H4 Q9Y4H4 G-protein-signaling modulator 3 GPSM3 sp|Q9Y4H4|GPSM3_HUMAN G-protein-signaling modulator 3 OS=Homo sapiens GN=GPSM3 PE=1 SV=1 0.598021 1.72984 2.84384E-32 308.16 283.29 308.16 1 S SPPPPGTRHTALGPRSASLLSLQTELLLDLV Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.598)AS(0.402)LLSLQTELLLDLVAEAQSR S(1.73)AS(-1.73)LLS(-31.37)LQT(-125.56)ELLLDLVAEAQS(-300.81)R 1 3 -0.351 1967.5 0 0 1330.7 0 0 2910.7 0 0 1370.1 0 0 3876.7 0 0 2513.8 0 0 3016.1 0 0 3263.2 0 0 1223.1 0 0 7202.2 0 0 1865.3 0 0 1257.3 0 0 2886.9 0 0 1422.7 0 0 3863.2 0 0 2491.6 0 0 3062.3 0 0 3461.2 0 0 1282.9 0 0 6857.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 159260000 159260000 0 0 NaN 4222 2282 54 54 3606 3833 4086 4542 4086 4542 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24595 4086 4542 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24595 4086 4542 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24595 Q9Y4P1 383 Q9Y4P1 Q9Y4P1 Cysteine protease ATG4B ATG4B sp|Q9Y4P1|ATG4B_HUMAN Cysteine protease ATG4B OS=Homo sapiens GN=ATG4B PE=1 SV=2 1 131.772 1.35707E-06 141.73 122.9 141.73 1 S SLDSSDVERLERFFDSEDEDFEILSL_____ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPXXXXX FFDS(1)EDEDFEILSL FFDS(131.77)EDEDFEILS(-131.77)L 4 2 0.049026 2023.3 0 0 2778.3 0 0 2064.7 0 0 2435.4 0 0 1810.8 0 0 2627.5 0 0 2832.7 0 0 3408 0 0 2322.3 0 0 43392 0 0 1914.7 0 0 2622.6 0 0 2075.5 0 0 2524.6 0 0 1866.6 0 0 2716.6 0 0 2820.3 0 0 4695.7 0 0 2313 0 0 40937 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 6867800 6867800 0 0 NaN 4223 2283 383 383 1257 1322 1423 1576;1577;1578 1423 1578 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24897 1423 1578 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24897 1423 1578 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24897 Q9Y4P8 413 Q9Y4P8 Q9Y4P8 WD repeat domain phosphoinositide-interacting protein 2 WIPI2 sp|Q9Y4P8|WIPI2_HUMAN WD repeat domain phosphoinositide-interacting protein 2 OS=Homo sapiens GN=WIPI2 PE=1 SV=1 0.999737 38.5667 7.6486E-10 200.27 162.93 200.27 1 S QTYGAAAGKGTYVPSSPTRLAYTDDLGAVGG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX GTYVPSS(1)PTR GT(-125.71)Y(-152.4)VPS(-39.06)S(38.57)PT(-38.57)R 7 2 -0.08005 37961 0 0 47911 0 0 36930 0 0 46859 0 0 37973 0 0 42718 0 0 36349 0 0 39908 0 0 52196 0 0 5996 0 0 35917 0 0 45253 0 0 37255 0 0 48111 0 0 38466 0 0 42979 0 0 37513 0 0 40320 0 0 50829 0 0 6569.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 180380000 180380000 0 0 NaN 4224 2284 413 413 1666 1757 1899 2117 1899 2117 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9338 1899 2117 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9338 1899 2117 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9338 Q9Y4R8 836 Q9Y4R8 Q9Y4R8 Telomere length regulation protein TEL2 homolog TELO2 sp|Q9Y4R8|TELO2_HUMAN Telomere length regulation protein TEL2 homolog OS=Homo sapiens GN=TELO2 PE=1 SV=2 1 217.21 6.41854E-13 217.21 203.05 217.21 1 S LLLLQRLKNRLLPPASP______________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPXXXXXXXXXXXXXX LLPPAS(1)P LLPPAS(217.21)P 6 2 0.013092 19132 0 0 25278 0 0 17850 0 0 24336 0 0 12569 0 0 17050 0 0 13414 0 0 19096 0 0 25411 0 0 9983.5 0 0 18099 0 0 23874 0 0 17985 0 0 24928 0 0 13090 0 0 17459 0 0 13942 0 0 19376 0 0 24564 0 0 9842.6 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 25717000 25717000 0 0 NaN 4225 2285 836 836 2447 2585 2779 3102;3103;3104;3105 2779 3103 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18549 2779 3103 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18549 2779 3103 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18549 Q9Y4U1 275 Q9Y4U1 Q9Y4U1 Methylmalonic aciduria and homocystinuria type C protein MMACHC sp|Q9Y4U1|MMAC_HUMAN Methylmalonic aciduria and homocystinuria type C protein OS=Homo sapiens GN=MMACHC PE=1 SV=3 0.999905 40.2126 0.000345597 120.12 116.27 120.12 1 S PGNPSRARSWLSPRVSPPASPGP________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPXXXXXXXX VS(1)PPASPGP VS(40.21)PPAS(-40.21)PGP 2 2 0.023333 13393 0 0 11534 0 0 14102 0 0 12093 0 0 10898 0 0 16467 0 0 10673 0 0 12073 0 0 10663 0 0 3585.8 0 0 12675 0 0 10899 0 0 14119 0 0 12453 0 0 11245 0 0 16262 0 0 10874 0 0 12389 0 0 10521 0 0 3655.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14794000 14794000 0 0 NaN 4226 2286 275 275 5265 5611 5981 6645 5981 6645 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12268 5981 6645 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12268 5981 6645 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12268 Q9Y4W2 617 Q9Y4W2 Q9Y4W2 Ribosomal biogenesis protein LAS1L LAS1L sp|Q9Y4W2|LAS1L_HUMAN Ribosomal biogenesis protein LAS1L OS=Homo sapiens GN=LAS1L PE=1 SV=2 0.99881 29.2493 4.94009E-16 232.51 215.63 232.51 1 S EEDRMEVGPFSTGQESPTAENARLLAQKRGA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPXXXXXXXX MEVGPFSTGQES(0.999)PT(0.001)AENAR MEVGPFS(-61.22)T(-57.12)GQES(29.25)PT(-29.25)AENAR 12 2 0.58719 2717.2 0 0 4675.6 0 0 2861.1 0 0 4800.1 0 0 3041.8 0 0 3444.6 0 0 2792.9 0 0 3177.6 0 0 4744.1 0 0 19572 0 0 2571.7 0 0 4417.6 0 0 2874.4 0 0 4899.2 0 0 3074.5 0 0 3546.7 0 0 2908.3 0 0 3787.5 0 0 4598.2 0 0 18503 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8022200 8022200 0 0 NaN 4227 2287 617 617 2692 2850 3057 3403 3057 3403 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17361 3057 3403 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17361 3057 3403 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17361 Q9Y520 2694 Q9Y520 Q9Y520 Protein PRRC2C PRRC2C sp|Q9Y520|PRC2C_HUMAN Protein PRRC2C OS=Homo sapiens GN=PRRC2C PE=1 SV=4 0.999775 36.7314 5.49266E-24 286.78 244.39 286.78 1 S RSTTPTSSPFRATSTSPNSQSSKMNSIVYQK X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX ATSTS(1)PNSQSSK AT(-85.45)S(-50.98)T(-36.73)S(36.73)PNS(-52.92)QS(-81.95)S(-92.13)K 5 2 0.12738 23617 0 0 26800 0 0 22822 0 0 27013 0 0 11146 0 0 21187 0 0 12992 0 0 22479 0 0 28631 0 0 941.2 0 0 22345 0 0 25318 0 0 22887 0 0 27630 0 0 12041 0 0 21515 0 0 13565 0 0 22527 0 0 27587 0 0 1406.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 32866000 32866000 0 0 NaN 4228 2289 2694 2694 543 577 618 690 618 690 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6338 618 690 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6338 618 690 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6338 Q9Y520 633 Q9Y520 Q9Y520 Protein PRRC2C PRRC2C sp|Q9Y520|PRC2C_HUMAN Protein PRRC2C OS=Homo sapiens GN=PRRC2C PE=1 SV=4 0.999152 30.7137 0.0353664 45.915 25.014 45.915 1 S NSCNKEEEPVFTRQDSNRSEKEATPVVHETE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX QDS(0.999)NRS(0.001)EK QDS(30.71)NRS(-30.71)EK 3 3 -0.30084 2667.8 0 0 2802.1 0 0 3473.4 0 0 3110.3 0 0 3089.9 0 0 3459 0 0 4016.1 0 0 3695.2 0 0 3820.2 0 0 4755.3 0 0 2527.5 0 0 2648.8 0 0 3448.3 0 0 3180.4 0 0 3171.1 0 0 3463.4 0 0 4038.2 0 0 3840.7 0 0 3777.7 0 0 4563.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1979200 1979200 0 0 NaN 4229 2289 633 633 3008 3189 3412 3784 3412 3784 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5174 3412 3784 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5174 3412 3784 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5174 Q9Y520 1542 Q9Y520 Q9Y520 Protein PRRC2C PRRC2C sp|Q9Y520|PRC2C_HUMAN Protein PRRC2C OS=Homo sapiens GN=PRRC2C PE=1 SV=4 0.958436 13.9999 0.00239529 94.287 66.318 94.287 1 S VGENVLPPKREIAKRSFSSQRPVDRQNRRGN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPXXXXXX S(0.958)FS(0.038)S(0.003)QRPVDR S(14)FS(-14)S(-24.49)QRPVDR 1 3 -0.2788 22850 0 0 16541 0 0 24921 0 0 17714 0 0 15171 0 0 24593 0 0 15175 0 0 21240 0 0 17522 0 0 3101.9 0 0 21629 0 0 15633 0 0 24856 0 0 18227 0 0 15974 0 0 24308 0 0 15511 0 0 21529 0 0 17190 0 0 3412.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23528000 23528000 0 0 NaN 4230 2289 1542 1542 3766 4007 4272 4747 4272 4747 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7882 4272 4747 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7882 4272 4747 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7882 Q9Y580 136 Q9Y580 Q9Y580 RNA-binding protein 7 RBM7 sp|Q9Y580|RBM7_HUMAN RNA-binding protein 7 OS=Homo sapiens GN=RBM7 PE=1 SV=1 0.499945 0 2.51486E-11 212.93 169.43 212.93 1 S MDNMTSSAQIIQRSFSSPENFQRQAVMNSAL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX SFS(0.5)S(0.5)PENFQR S(-36.61)FS(0)S(0)PENFQR 3 2 -0.048999 22334 0 0 16669 0 0 22531 0 0 18306 0 0 30064 0 0 21292 0 0 31400 0 0 22668 0 0 16244 0 0 9820 0 0 21134 0 0 15756 0 0 22771 0 0 18744 0 0 30069 0 0 21245 0 0 31483 0 0 22980 0 0 16671 0 0 9771.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 145550000 145550000 0 0 NaN 4231 2290 136 136 3764 4005 4270 4745 4270 4745 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13575 4270 4745 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13575 4270 4745 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13575 Q9Y580 137 Q9Y580 Q9Y580 RNA-binding protein 7 RBM7 sp|Q9Y580|RBM7_HUMAN RNA-binding protein 7 OS=Homo sapiens GN=RBM7 PE=1 SV=1 0.499945 0 2.51486E-11 212.93 169.43 212.93 1 S DNMTSSAQIIQRSFSSPENFQRQAVMNSALR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SFS(0.5)S(0.5)PENFQR S(-36.61)FS(0)S(0)PENFQR 4 2 -0.048999 22334 0 0 16669 0 0 22531 0 0 18306 0 0 30064 0 0 21292 0 0 31400 0 0 22668 0 0 16244 0 0 9820 0 0 21134 0 0 15756 0 0 22771 0 0 18744 0 0 30069 0 0 21245 0 0 31483 0 0 22980 0 0 16671 0 0 9771.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 145550000 145550000 0 0 NaN 4232 2290 137 137 3764 4005 4270 4745 4270 4745 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13575 4270 4745 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13575 4270 4745 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13575 Q9Y5A9 2 Q9Y5A9 Q9Y5A9 YTH domain-containing family protein 2 YTHDF2 sp|Q9Y5A9|YTHD2_HUMAN YTH domain-containing family protein 2 OS=Homo sapiens GN=YTHDF2 PE=1 SV=2 0.985089 18.6793 2.19835E-10 133.57 108.8 133.57 1 S ______________MSASSLLEQRPKGQGNK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPXXXXX S(0.985)AS(0.013)S(0.002)LLEQRPK S(18.68)AS(-18.68)S(-28.01)LLEQRPK 1 2 -0.56363 17093 0 0 34133 0 0 18528 0 0 33987 0 0 21196 0 0 17708 0 0 20915 0 0 22537 0 0 34045 0 0 13507 0 0 16180 0 0 32243 0 0 18606 0 0 34644 0 0 21361 0 0 18562 0 0 21663 0 0 22826 0 0 33035 0 0 13240 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 109260000 109260000 0 0 NaN 4233 2291 2 2 3622 3850 4103 4560 4103 4560 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14920 4103 4560 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14920 4103 4560 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14920 Q9Y5J1 121 Q9Y5J1 Q9Y5J1 U3 small nucleolar RNA-associated protein 18 homolog UTP18 sp|Q9Y5J1|UTP18_HUMAN U3 small nucleolar RNA-associated protein 18 homolog OS=Homo sapiens GN=UTP18 PE=1 SV=3 1 176.568 1.81652E-13 176.57 144.8 176.57 2 S LLRRLRGPRVQEHEDSGDSEVENEAKGNFPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPXXXXX VQEHEDS(1)GDS(1)EVENEAK VQEHEDS(176.57)GDS(176.57)EVENEAK 7 3 -0.59815 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4234 2293 121 121 5220 5564 5929 6587 5929 6587 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10448 5929 6587 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10448 5929 6587 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10448 Q9Y5J1 124 Q9Y5J1 Q9Y5J1 U3 small nucleolar RNA-associated protein 18 homolog UTP18 sp|Q9Y5J1|UTP18_HUMAN U3 small nucleolar RNA-associated protein 18 homolog OS=Homo sapiens GN=UTP18 PE=1 SV=3 1 176.568 1.81652E-13 176.57 144.8 176.57 2 S RLRGPRVQEHEDSGDSEVENEAKGNFPPQKK X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPXXXXXXXX VQEHEDS(1)GDS(1)EVENEAK VQEHEDS(176.57)GDS(176.57)EVENEAK 10 3 -0.59815 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4235 2293 124 124 5220 5564 5929 6587 5929 6587 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10448 5929 6587 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10448 5929 6587 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10448 Q9Y5K6 510 Q9Y5K6 Q9Y5K6 CD2-associated protein CD2AP sp|Q9Y5K6|CD2AP_HUMAN CD2-associated protein OS=Homo sapiens GN=CD2AP PE=1 SV=1 0.989849 19.8226 0.000140186 116.9 77.373 116.9 2 S KMPGRRLPGRFNGGHSPTHSPEKILKLPKEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPXXXXXXXX FNGGHS(0.99)PT(0.026)HS(0.985)PEK FNGGHS(19.82)PT(-18.02)HS(18.02)PEK 6 3 -0.10231 0 12677 0 0 30436 0 0 12394 0 0 31890 0 0 17773 0 0 15479 0 0 17422 0 0 20472 0 0 35308 0 0 8286.1 0 0 11994 0 0 28760 0 0 12562 0 0 32391 0 0 17731 0 0 16326 0 0 18241 0 0 20592 0 0 34079 0 0 8276.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 45731000 0 45731000 0 NaN 4236 2295 510 510 1296 1367 1471 1631 1471 1631 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8487 1471 1631 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8487 1471 1631 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8487 Q9Y5K6 514 Q9Y5K6 Q9Y5K6 CD2-associated protein CD2AP sp|Q9Y5K6|CD2AP_HUMAN CD2-associated protein OS=Homo sapiens GN=CD2AP PE=1 SV=1 0.984632 18.0214 0.000140186 116.9 77.373 116.9 2 S RRLPGRFNGGHSPTHSPEKILKLPKEEDSAN X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX FNGGHS(0.99)PT(0.026)HS(0.985)PEK FNGGHS(19.82)PT(-18.02)HS(18.02)PEK 10 3 -0.10231 0 12677 0 0 30436 0 0 12394 0 0 31890 0 0 17773 0 0 15479 0 0 17422 0 0 20472 0 0 35308 0 0 8286.1 0 0 11994 0 0 28760 0 0 12562 0 0 32391 0 0 17731 0 0 16326 0 0 18241 0 0 20592 0 0 34079 0 0 8276.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 45731000 0 45731000 0 NaN 4237 2295 514 514 1296 1367 1471 1631 1471 1631 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8487 1471 1631 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8487 1471 1631 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8487 Q9Y5Q9 43 Q9Y5Q9 Q9Y5Q9 General transcription factor 3C polypeptide 3 GTF3C3 sp|Q9Y5Q9|TF3C3_HUMAN General transcription factor 3C polypeptide 3 OS=Homo sapiens GN=GTF3C3 PE=1 SV=1 0.999886 39.4452 6.17021E-12 179.49 161.08 179.49 1 S RKTREKKSLQEKGKLSAEENPDDSEVPSSSG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP GKLS(1)AEENPDDSEVPSSSGINSTK GKLS(39.45)AEENPDDS(-39.45)EVPS(-112.2)S(-119.14)S(-126.57)GINS(-160.16)T(-165.25)K 4 4 1.8301 10922 0 0 9148.7 0 0 11249 0 0 7631.5 0 0 9309.5 0 0 11014 0 0 8620.2 0 0 11517 0 0 11360 0 0 9561.8 0 0 10336 0 0 8633.8 0 0 11284 0 0 7982.7 0 0 9554.7 0 0 10913 0 0 8882.8 0 0 11821 0 0 11093 0 0 9270.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14718000 14718000 0 0 NaN 4238 2298 43 43 1489 1567 1692 1873 1692 1873 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13497 1692 1873 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13497 1692 1873 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13497 Q9Y5S9 42 Q9Y5S9 Q9Y5S9 RNA-binding protein 8A RBM8A sp|Q9Y5S9|RBM8A_HUMAN RNA-binding protein 8A OS=Homo sapiens GN=RBM8A PE=1 SV=1 1 69.292 9.2543E-08 175.66 120.42 175.66 1 S KLKEKAKKRKGRGFGSEEGSRARMREDYDSV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX GFGS(1)EEGSR GFGS(69.29)EEGS(-69.29)R 4 2 0.63024 30426 0 0 33894 0 0 30318 0 0 32549 0 0 32448 0 0 26649 0 0 34961 0 0 34514 0 0 36256 0 0 6808.4 0 0 28790 0 0 32011 0 0 30565 0 0 33407 0 0 32839 0 0 27087 0 0 35503 0 0 34520 0 0 35719 0 0 7209.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 82295000 82295000 0 0 NaN 4239 2300 42 42 1421 1498 1607 1777 1607 1777 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8323 1607 1777 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8323 1607 1777 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8323 Q9Y5T5 552 Q9Y5T5 Q9Y5T5 Ubiquitin carboxyl-terminal hydrolase 16 USP16 sp|Q9Y5T5|UBP16_HUMAN Ubiquitin carboxyl-terminal hydrolase 16 OS=Homo sapiens GN=USP16 PE=1 SV=1 0.682282 3.79434 7.20407E-11 191.22 178.73 191.22 1 S MKNINMDNDLEVLTSSPTRNLNGAYLTEGSN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPXXXXXXXXXXXX NINMDNDLEVLTS(0.033)S(0.682)PT(0.285)R NINMDNDLEVLT(-35.36)S(-13.19)S(3.79)PT(-3.79)R 14 3 -0.92691 5292.3 0 0 7346.7 0 0 6736.9 0 0 7511.9 0 0 5931.1 0 0 6022.3 0 0 5089.3 0 0 7949.9 0 0 8215.6 0 0 24626 0 0 5013.3 0 0 6941.1 0 0 6689.1 0 0 7679 0 0 6057.5 0 0 6173.5 0 0 5306.5 0 0 8641.7 0 0 7973.7 0 0 23372 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28266000 28266000 0 0 NaN 4240 2301 552 552 2829 2999 3212 3565 3212 3565 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19730 3212 3565 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19730 3212 3565 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19730 Q9Y5X1 199 Q9Y5X1 Q9Y5X1 Sorting nexin-9 SNX9 sp|Q9Y5X1|SNX9_HUMAN Sorting nexin-9 OS=Homo sapiens GN=SNX9 PE=1 SV=1 0.512541 1.31658 0.000123219 108.14 76.336 108.14 1 S ADAGGAQRGNSRASSSSMKIPLNKFPGFAKP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX AS(0.022)S(0.087)S(0.513)S(0.379)MKIPLNK AS(-13.65)S(-7.71)S(1.32)S(-1.32)MKIPLNK 4 3 -0.55795 11254 0 0 26480 0 0 11955 0 0 25898 0 0 9486.1 0 0 10672 0 0 8941.6 0 0 15736 0 0 27541 0 0 6114.9 0 0 10652 0 0 25011 0 0 11967 0 0 26382 0 0 9782.2 0 0 11452 0 0 9637.3 0 0 15772 0 0 26386 0 0 6122.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23495000 23495000 0 0 NaN 4241 2302 199 199 509 541 581 648 581 648 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15353 581 648 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15353 581 648 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15353 Q9Y5X1 116 Q9Y5X1 Q9Y5X1 Sorting nexin-9 SNX9 sp|Q9Y5X1|SNX9_HUMAN Sorting nexin-9 OS=Homo sapiens GN=SNX9 PE=1 SV=1 0.99274 22.0804 6.02553E-05 106.27 95.216 106.27 1 S VGSGNDPWSAWSASKSGNWESSEGWGAQPEG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.993)GNWES(0.006)S(0.001)EGWGAQPEGAGAQR S(22.08)GNWES(-22.08)S(-29.51)EGWGAQPEGAGAQR 1 3 -1.2055 7158.2 0 0 9381.3 0 0 7813 0 0 9844.8 0 0 7154.6 0 0 8345.4 0 0 8301.8 0 0 9026.8 0 0 10860 0 0 10376 0 0 6775.9 0 0 8864.8 0 0 7823.7 0 0 10056 0 0 7318 0 0 8460 0 0 8465.4 0 0 9340.8 0 0 10607 0 0 9979.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5649400 5649400 0 0 NaN 4242 2302 116 116 3793 4041 4310 4789 4310 4789 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14897 4310 4789 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14897 4310 4789 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14897 Q9Y608 320 Q9Y608 Q9Y608 Leucine-rich repeat flightless-interacting protein 2 LRRFIP2 sp|Q9Y608|LRRF2_HUMAN Leucine-rich repeat flightless-interacting protein 2 OS=Homo sapiens GN=LRRFIP2 PE=1 SV=1 0.989835 22.5884 0.00906854 86.798 73.693 86.798 1 S TRPSSRNSASATTPLSGNSSRRGSGDTSSLI X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPXXXXXXXXXX NSASAT(0.002)T(0.005)PLS(0.99)GNS(0.002)SR NS(-62.96)AS(-41.61)AT(-26.47)T(-22.59)PLS(22.59)GNS(-27.07)S(-33.23)R 10 2 0.96334 4334.2 0 0 7915.2 0 0 4720.9 0 0 7281.3 0 0 12016 0 0 5346.4 0 0 13835 0 0 8200 0 0 9187.9 0 0 2889.9 0 0 4102.7 0 0 7473.6 0 0 4824.2 0 0 7483.8 0 0 11784 0 0 5486.5 0 0 13868 0 0 8201.7 0 0 9262.8 0 0 2911 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15870000 15870000 0 0 NaN 4243 2304 320 320 2909 3083 3302 3661 3302 3661 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7639 3302 3661 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7639 3302 3661 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7639 Q9Y608 323 Q9Y608 Q9Y608 Leucine-rich repeat flightless-interacting protein 2 LRRFIP2 sp|Q9Y608|LRRF2_HUMAN Leucine-rich repeat flightless-interacting protein 2 OS=Homo sapiens GN=LRRFIP2 PE=1 SV=1 0.582877 2.2742 0.0208325 81.606 52.265 81.606 1 S SSRNSASATTPLSGNSSRRGSGDTSSLIDPD Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPXXXXXXXXXXXXX NSASATTPLS(0.071)GNS(0.583)S(0.345)R NS(-66.65)AS(-50.19)AT(-39.75)T(-32.07)PLS(-9.12)GNS(2.27)S(-2.27)R 13 2 0.12529 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4244 2304 323 323 2909 3083 3303 3662 3303 3662 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8394 3303 3662 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8394 3303 3662 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8394 Q9Y608 308 Q9Y608 Q9Y608 Leucine-rich repeat flightless-interacting protein 2 LRRFIP2 sp|Q9Y608|LRRF2_HUMAN Leucine-rich repeat flightless-interacting protein 2 OS=Homo sapiens GN=LRRFIP2 PE=1 SV=1 0.567576 1.36462 0.0391235 44.734 38.762 44.734 1 S DEKSDKQYAENYTRPSSRNSASATTPLSGNS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY) XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX QYAENYT(0.017)RPS(0.568)S(0.415)R QY(-44.73)AENY(-31.6)T(-15.12)RPS(1.36)S(-1.36)R 10 3 -0.65219 10498 0 0 11020 0 0 11192 0 0 12395 0 0 13160 0 0 10419 0 0 15673 0 0 13141 0 0 12082 0 0 3172.9 0 0 9936.7 0 0 10418 0 0 11258 0 0 12611 0 0 13270 0 0 10572 0 0 15735 0 0 13172 0 0 12074 0 0 3291.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19164000 19164000 0 0 NaN 4245 2304 308 308 3174;3663 3367;3898 3599 3989 3599 3989 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7997 3599 3989 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7997 3599 3989 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7997 Q9Y608 309 Q9Y608 Q9Y608 Leucine-rich repeat flightless-interacting protein 2 LRRFIP2 sp|Q9Y608|LRRF2_HUMAN Leucine-rich repeat flightless-interacting protein 2 OS=Homo sapiens GN=LRRFIP2 PE=1 SV=1 0.721821 4.23347 0.0385738 57.293 41.537 57.293 1 S EKSDKQYAENYTRPSSRNSASATTPLSGNSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X XXPPPPPPPPPPPPPPPXXXXXXXXXXXXXX SDKQYAENYT(0.006)RPS(0.272)S(0.722)R S(-57.03)DKQY(-51.86)AENY(-36.06)T(-21.05)RPS(-4.23)S(4.23)R 14 3 0.44439 6446.7 0 0 10683 0 0 7097.6 0 0 10666 0 0 14199 0 0 7267.6 0 0 14491 0 0 10804 0 0 10004 0 0 3079.1 0 0 6102.6 0 0 10092 0 0 7196.9 0 0 10898 0 0 13990 0 0 7486.5 0 0 14614 0 0 10793 0 0 10061 0 0 3149.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12483000 12483000 0 0 NaN 4246 2304 309 309 3174;3663 3367;3898 4157 4621 4157 4621 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8808 4157 4621 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8808 4157 4621 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8808 Q9Y608 328 Q9Y608 Q9Y608 Leucine-rich repeat flightless-interacting protein 2 LRRFIP2 sp|Q9Y608|LRRF2_HUMAN Leucine-rich repeat flightless-interacting protein 2 OS=Homo sapiens GN=LRRFIP2 PE=1 SV=1 0.984654 18.0881 6.00389E-08 164.12 135 164.12 1 S ASATTPLSGNSSRRGSGDTSSLIDPDTSLSE X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RGS(0.985)GDT(0.015)SSLIDPDTSLSELR RGS(18.09)GDT(-18.09)S(-42.77)S(-58.88)LIDPDT(-131.33)S(-136.2)LS(-140.83)ELR 3 3 -0.25566 5526 0 0 7010.4 0 0 6001.4 0 0 6815 0 0 9731.1 0 0 7763.1 0 0 9697.5 0 0 8821.8 0 0 7424.6 0 0 9511.8 0 0 5230.8 0 0 6621.3 0 0 6061.3 0 0 7024.5 0 0 9652.3 0 0 7770.2 0 0 9810.6 0 0 9094.5 0 0 7422.3 0 0 9160.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 36392000 36392000 0 0 NaN 4247 2304 328 328 3251 3448 3684 4087 3684 4087 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17977 3684 4087 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17977 3684 4087 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17977 Q9Y613 523 Q9Y613 Q9Y613 FH1/FH2 domain-containing protein 1 FHOD1 sp|Q9Y613|FHOD1_HUMAN FH1/FH2 domain-containing protein 1 OS=Homo sapiens GN=FHOD1 PE=1 SV=3 1 59.5697 0.00474957 88.571 72.265 59.57 1 S QRSLAPEPKEPLIPASPKAEPIWELPTRAPR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPXXX EPLIPAS(1)PK EPLIPAS(59.57)PK 7 2 0.38193 20621 0 0 37114 0 0 22499 0 0 36090 0 0 30446 0 0 22826 0 0 30900 0 0 29125 0 0 37498 0 0 65408 0 0 19519 0 0 35054 0 0 22646 0 0 36905 0 0 30441 0 0 23674 0 0 31613 0 0 30942 0 0 36719 0 0 62263 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 48251000 48251000 0 0 NaN 4248 2305 523 523 1087;1088 1145;1146 1233;1234 1356;1357;1358 1233 1356 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16101 1234 1358 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22883 1234 1358 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22883 Q9Y613 367 Q9Y613 Q9Y613 FH1/FH2 domain-containing protein 1 FHOD1 sp|Q9Y613|FHOD1_HUMAN FH1/FH2 domain-containing protein 1 OS=Homo sapiens GN=FHOD1 PE=1 SV=3 1 138.763 4.01525E-06 138.76 104.8 138.76 1 S ERRKPSSEEGKRSRRSLEGGGCPARAPEPGP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPXXXXXX S(1)LEGGGCPAR S(138.76)LEGGGCPAR 1 2 -0.37865 18259 0 0 15317 0 0 16946 0 0 16466 0 0 24897 0 0 15524 0 0 24101 0 0 18368 0 0 16214 0 0 3142.3 0 0 17272 0 0 14476 0 0 17235 0 0 16822 0 0 24777 0 0 15644 0 0 24355 0 0 18409 0 0 16333 0 0 3383.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37159000 37159000 0 0 NaN 4249 2305 367 367 3929 4188 4470 4969 4470 4969 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7578 4470 4969 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7578 4470 4969 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7578 Q9Y613 498 Q9Y613 Q9Y613 FH1/FH2 domain-containing protein 1 FHOD1 sp|Q9Y613|FHOD1_HUMAN FH1/FH2 domain-containing protein 1 OS=Homo sapiens GN=FHOD1 PE=1 SV=3 0.999995 52.7071 7.98255E-11 191.01 141.99 191.01 1 S LWDSPETAPAARTPQSPAPCVLLRAQRSLAP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX TPQS(1)PAPCVLLR T(-52.71)PQS(52.71)PAPCVLLR 4 2 -0.60703 11043 0 0 22137 0 0 11728 0 0 21493 0 0 15704 0 0 10982 0 0 17086 0 0 16689 0 0 21412 0 0 13490 0 0 10452 0 0 20908 0 0 11821 0 0 21939 0 0 15725 0 0 11574 0 0 17444 0 0 16925 0 0 20944 0 0 13089 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 41236000 41236000 0 0 NaN 4250 2305 498 498 4839 5164 5503 6121 5503 6121 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16168 5503 6121 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16168 5503 6121 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16168 Q9Y618 939 Q9Y618 Q9Y618 Nuclear receptor corepressor 2 NCOR2 sp|Q9Y618|NCOR2_HUMAN Nuclear receptor corepressor 2 OS=Homo sapiens GN=NCOR2 PE=1 SV=2 0.902162 11.9878 0.00425763 89.859 58.987 89.859 1 S DEVDEAEGGDKNRLLSPRPSLLTPTGDPRAN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX LLS(0.902)PRPS(0.057)LLT(0.04)PTGDPR LLS(11.99)PRPS(-11.99)LLT(-13.48)PT(-35.09)GDPR 3 3 1.3494 9295.1 0 0 8511.7 0 0 8609.2 0 0 10073 0 0 6674.4 0 0 9475.8 0 0 7253.8 0 0 8899.7 0 0 8106.9 0 0 8162.5 0 0 8792.9 0 0 8049.6 0 0 8685.8 0 0 10238 0 0 6896.5 0 0 9532.9 0 0 7379.3 0 0 9195.3 0 0 7962.9 0 0 7892 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26889000 26889000 0 0 NaN 4251 2306 939 939 2461 2599 2793 3120 2793 3120 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18985 2793 3120 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18985 2793 3120 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18985 Q9Y618 2267 Q9Y618 Q9Y618 Nuclear receptor corepressor 2 NCOR2 sp|Q9Y618|NCOR2_HUMAN Nuclear receptor corepressor 2 OS=Homo sapiens GN=NCOR2 PE=1 SV=2 0.475655 0 0.0111471 84.327 66.08 84.327 S LLYRDGEQTEPSRMGSKSPGNTSQPPAFFSK X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP MGS(0.476)KS(0.476)PGNT(0.041)S(0.008)QPPAFFSK MGS(0)KS(0)PGNT(-10.66)S(-17.86)QPPAFFS(-74.06)K 3 3 -0.46697 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4252 2306 2267 2267 2704 2866;2867 3075 3422 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16284 3075 3422 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16284 3075 3422 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16284 Q9Y618 2269 Q9Y618 Q9Y618 Nuclear receptor corepressor 2 NCOR2 sp|Q9Y618|NCOR2_HUMAN Nuclear receptor corepressor 2 OS=Homo sapiens GN=NCOR2 PE=1 SV=2 0.992754 21.4111 0.0020424 96.143 76.932 96.143 1 S YRDGEQTEPSRMGSKSPGNTSQPPAFFSKLT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPXX S(0.993)PGNT(0.007)SQPPAFFSK S(21.41)PGNT(-21.41)S(-41.38)QPPAFFS(-87.2)K 1 3 0.05917 10721 0 0 9013.1 0 0 11385 0 0 9112.8 0 0 6713 0 0 10815 0 0 8016.4 0 0 10658 0 0 9802.8 0 0 5737.5 0 0 10147 0 0 8514.9 0 0 11371 0 0 9378 0 0 7108.3 0 0 10773 0 0 8146.3 0 0 10870 0 0 9596.7 0 0 5649.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 47267000 47267000 0 0 NaN 4253 2306 2269 2269 2704;4107 2866;2867;4379 4669 5184 4669 5184 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18011 4669 5184 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18011 4669 5184 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18011 Q9Y620 14 Q9Y620 Q9Y620 DNA repair and recombination protein RAD54B RAD54B sp|Q9Y620|RA54B_HUMAN DNA repair and recombination protein RAD54B OS=Homo sapiens GN=RAD54B PE=1 SV=1 0.999999 62.5199 0.00423378 89.489 72.549 89.489 1 S __MRRSAAPSQLQGNSFKKPKFIPPGRSNPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPXXXXXXXXXXXXX SAAPSQLQGNS(1)FK S(-76.61)AAPS(-62.52)QLQGNS(62.52)FK 11 3 0.50168 11717 0 0 12797 0 0 14785 0 0 12482 0 0 10996 0 0 14374 0 0 9459 0 0 12417 0 0 13162 0 0 10409 0 0 11099 0 0 12087 0 0 14662 0 0 12865 0 0 11364 0 0 14318 0 0 9803.6 0 0 12845 0 0 12830 0 0 10089 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11715000 11715000 0 0 NaN 4254 2307 14 14 3572 3795 4048 4503 4048 4503 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13138 4048 4503 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13138 4048 4503 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13138 Q9Y624 284 Q9Y624 Q9Y624 Junctional adhesion molecule A F11R sp|Q9Y624|JAM1_HUMAN Junctional adhesion molecule A OS=Homo sapiens GN=F11R PE=1 SV=1 0.999235 31.172 0.00711712 82.069 64.337 82.069 1 S TKKGTSSKKVIYSQPSARSEGEFKQTSSFLV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX KVIYS(0.001)QPS(0.999)AR KVIY(-57.21)S(-31.17)QPS(31.17)AR 8 3 0.67367 11363 0 0 23283 0 0 12686 0 0 20273 0 0 14994 0 0 11017 0 0 12857 0 0 16460 0 0 21284 0 0 4846.2 0 0 10757 0 0 21978 0 0 12722 0 0 20851 0 0 15057 0 0 11533 0 0 13420 0 0 16445 0 0 20643 0 0 4944.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17496000 17496000 0 0 NaN 4255 2308 284 284 2264 2393 2576 2878 2576 2878 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10700 2576 2878 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10700 2576 2878 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10700 Q9Y624 295 Q9Y624 Q9Y624 Junctional adhesion molecule A F11R sp|Q9Y624|JAM1_HUMAN Junctional adhesion molecule A OS=Homo sapiens GN=F11R PE=1 SV=1 0.469768 0 0.0114805 85.731 77.799 85.731 S YSQPSARSEGEFKQTSSFLV___________ X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX QT(0.06)S(0.47)S(0.47)FLV QT(-8.9)S(0)S(0)FLV 3 2 -0.014374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4256 2308 295 295 3161 3353 3584 3974 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18962 3584 3974 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18962 3584 3974 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18962 Q9Y624 296 Q9Y624 Q9Y624 Junctional adhesion molecule A F11R sp|Q9Y624|JAM1_HUMAN Junctional adhesion molecule A OS=Homo sapiens GN=F11R PE=1 SV=1 0.469768 0 0.0114805 85.731 77.799 85.731 S SQPSARSEGEFKQTSSFLV____________ X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QT(0.06)S(0.47)S(0.47)FLV QT(-8.9)S(0)S(0)FLV 4 2 -0.014374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4257 2308 296 296 3161 3353 3584 3974 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18962 3584 3974 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18962 3584 3974 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18962 Q9Y6A5 317 Q9Y6A5 Q9Y6A5 Transforming acidic coiled-coil-containing protein 3 TACC3 sp|Q9Y6A5|TACC3_HUMAN Transforming acidic coiled-coil-containing protein 3 OS=Homo sapiens GN=TACC3 PE=1 SV=1 0.958584 13.6446 1.20524E-05 132.28 103.52 132.28 1 S TAPTNHLVAGRAMTLSPQEEVAAGQMASSSR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP AMT(0.041)LS(0.959)PQEEVAAGQMASSSR AMT(-13.64)LS(13.64)PQEEVAAGQMAS(-116.31)S(-120.63)S(-120.22)R 5 3 -2.5952 9155 0 0 10536 0 0 8502.5 0 0 9540.3 0 0 9940.1 0 0 8460 0 0 6309.5 0 0 11130 0 0 10089 0 0 15880 0 0 8660.5 0 0 9946.9 0 0 8609.8 0 0 9839.1 0 0 9954.6 0 0 8591.5 0 0 6700.4 0 0 11539 0 0 9794.9 0 0 15211 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 32184000 32184000 0 0 NaN 4258 2310 317 317 338 363 392 433 392 433 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16632 392 433 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16632 392 433 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16632 Q9Y6A5 250 Q9Y6A5 Q9Y6A5 Transforming acidic coiled-coil-containing protein 3 TACC3 sp|Q9Y6A5|TACC3_HUMAN Transforming acidic coiled-coil-containing protein 3 OS=Homo sapiens GN=TACC3 PE=1 SV=1 0.839149 7.17414 6.33699E-05 104.63 86.267 104.63 1 S ECRHGGVCAPAAVATSPPGAIPKEACGGAPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPXXXXXXXX HGGVCAPAAVAT(0.161)S(0.839)PPGAIPK HGGVCAPAAVAT(-7.17)S(7.17)PPGAIPK 13 3 1.8938 13542 0 0 32477 0 0 15946 0 0 33172 0 0 12677 0 0 19416 0 0 10253 0 0 22381 0 0 34165 0 0 16331 0 0 12823 0 0 30684 0 0 15874 0 0 33797 0 0 13046 0 0 20143 0 0 11208 0 0 22827 0 0 32696 0 0 15895 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 61025000 61025000 0 0 NaN 4259 2310 250 250 1712 1806 1951 2175 1951 2175 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14255 1951 2175 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14255 1951 2175 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14255 Q9Y6A5 71 Q9Y6A5 Q9Y6A5 Transforming acidic coiled-coil-containing protein 3 TACC3 sp|Q9Y6A5|TACC3_HUMAN Transforming acidic coiled-coil-containing protein 3 OS=Homo sapiens GN=TACC3 PE=1 SV=1 0.996922 25.1046 9.6419E-07 172 106.53 172 1 S TFQTPLRDPQTHRILSPSMASKLEAPFTQDD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX ILS(0.997)PS(0.003)MASK ILS(25.1)PS(-25.1)MAS(-78.56)K 3 2 -0.4628 16423 0 0 36124 0 0 16859 0 0 34980 0 0 14100 0 0 16122 0 0 13561 0 0 23973 0 0 39006 0 0 9343.6 0 0 15542 0 0 34119 0 0 16916 0 0 35683 0 0 14488 0 0 17118 0 0 14526 0 0 24023 0 0 37408 0 0 9353 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 36490000 36490000 0 0 NaN 4260 2310 71 71 1889 1993 2151 2410 2151 2410 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17466 2151 2410 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17466 2151 2410 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17466 Q9Y6A5 434 Q9Y6A5 Q9Y6A5 Transforming acidic coiled-coil-containing protein 3 TACC3 sp|Q9Y6A5|TACC3_HUMAN Transforming acidic coiled-coil-containing protein 3 OS=Homo sapiens GN=TACC3 PE=1 SV=1 0.876375 8.50734 0.0132032 65.277 59.848 65.277 1 S GGDTKSGCSEAQPPESPETRLGQPAAEQLHA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPXXXXXXXXXXX SGCSEAQPPES(0.876)PET(0.124)R S(-52.8)GCS(-43.61)EAQPPES(8.51)PET(-8.51)R 11 3 -0.21889 8979.5 0 0 7902.6 0 0 8641.7 0 0 9527.9 0 0 9210.7 0 0 8739.5 0 0 10562 0 0 9408.9 0 0 11570 0 0 3051.6 0 0 8495.6 0 0 7474.6 0 0 8730.6 0 0 9671.1 0 0 9333.5 0 0 8809.3 0 0 10714 0 0 9503.8 0 0 11373 0 0 3091.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9334800 9334800 0 0 NaN 4261 2310 434 434 3775 4016 4281 4756 4281 4756 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6655 4281 4756 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6655 4281 4756 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6655 Q9Y6A5 177 Q9Y6A5 Q9Y6A5 Transforming acidic coiled-coil-containing protein 3 TACC3 sp|Q9Y6A5|TACC3_HUMAN Transforming acidic coiled-coil-containing protein 3 OS=Homo sapiens GN=TACC3 PE=1 SV=1 0.983958 17.8772 1.4232E-11 206.74 180.77 206.74 1 S GSSENQMVSPGKVSGSPEQAVEENLSSYSLD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP VS(0.016)GS(0.984)PEQAVEENLSSYSLDR VS(-17.88)GS(17.88)PEQAVEENLS(-132.86)S(-138.57)Y(-145.32)S(-127.77)LDR 4 2 0.59821 6260.6 0 0 11238 0 0 5846.2 0 0 12355 0 0 6400.6 0 0 5584.9 0 0 6674.1 0 0 10011 0 0 12627 0 0 52764 0 0 5922.6 0 0 10623 0 0 5917.9 0 0 12509 0 0 6472.1 0 0 6055.1 0 0 6943.6 0 0 11460 0 0 12206 0 0 49916 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 52072000 52072000 0 0 NaN 4262 2310 177 177 5250 5596 5965;5966 6629;6630 5966 6630 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20442 5966 6630 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20442 5966 6630 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20442 Q9Y6D6 1079 Q9Y6D6 Q9Y6D6 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 ARFGEF1 sp|Q9Y6D6|BIG1_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Homo sapiens GN=ARFGEF1 PE=1 SV=2 0.998282 27.6724 0.004567 87.082 54.324 87.082 1 S VKPRYISGTVRGREGSLTGTKDQAPDEFVGL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX GREGS(0.998)LT(0.002)GTK GREGS(27.67)LT(-27.67)GT(-49.18)K 5 3 0.50213 29748 0 0 12848 0 0 28962 0 0 13954 0 0 22726 0 0 29805 0 0 25993 0 0 23143 0 0 13824 0 0 2998.4 0 0 28147 0 0 12144 0 0 29138 0 0 14515 0 0 23465 0 0 29090 0 0 25968 0 0 23563 0 0 14156 0 0 3359 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27313000 27313000 0 0 NaN 4263 2311 1079 1079 1585 1670 1805 2006 1805 2006 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7826 1805 2006 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7826 1805 2006 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7826 Q9Y6D9 428 Q9Y6D9 Q9Y6D9 Mitotic spindle assembly checkpoint protein MAD1 MAD1L1 sp|Q9Y6D9|MD1L1_HUMAN Mitotic spindle assembly checkpoint protein MAD1 OS=Homo sapiens GN=MAD1L1 PE=1 SV=2 0.982551 18.8237 9.0252E-08 147.91 112.47 147.91 1 S AILGSYDSELTPAEYSPQLTRRMREAEDMVQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX AILGSYDSELT(0.001)PAEY(0.003)S(0.983)PQLT(0.013)R AILGS(-84.53)Y(-109.53)DS(-62.84)ELT(-28.49)PAEY(-24.9)S(18.82)PQLT(-18.82)R 16 3 0.34521 7266.9 0 0 7299.6 0 0 6389.5 0 0 7363 0 0 7013 0 0 7376.2 0 0 8211 0 0 6879 0 0 9241.5 0 0 19514 0 0 6873 0 0 6896.1 0 0 6494.2 0 0 7556.5 0 0 7097.9 0 0 7423.5 0 0 8328.8 0 0 7507.4 0 0 9074.9 0 0 18534 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22464000 22464000 0 0 NaN 4264 2312 428 428 252 269 287 318 287 318 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21090 287 318 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21090 287 318 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21090 Q9Y6G9 207 Q9Y6G9 Q9Y6G9 Cytoplasmic dynein 1 light intermediate chain 1 DYNC1LI1 sp|Q9Y6G9|DC1L1_HUMAN Cytoplasmic dynein 1 light intermediate chain 1 OS=Homo sapiens GN=DYNC1LI1 PE=1 SV=3 1 120.63 1.85389E-07 147.22 123.13 147.22 1 S RDFQEYVEPGEDFPASPQRRNTASQEDKDDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX DFQEYVEPGEDFPAS(1)PQRR DFQEY(-120.63)VEPGEDFPAS(120.63)PQRR 15 3 1.1036 9977.8 0 0 10156 0 0 8480.5 0 0 11146 0 0 8619.2 0 0 8911.4 0 0 10461 0 0 10400 0 0 14698 0 0 37827 0 0 9435.9 0 0 9600 0 0 8630.7 0 0 11348 0 0 8768.6 0 0 9122 0 0 10676 0 0 11514 0 0 14323 0 0 35859 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 35820000 35820000 0 0 NaN 4265 2313 207 207 667 711 758 838 758 838 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17254 758 838 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17254 758 838 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17254 Q9Y6G9 510 Q9Y6G9 Q9Y6G9 Cytoplasmic dynein 1 light intermediate chain 1 DYNC1LI1 sp|Q9Y6G9|DC1L1_HUMAN Cytoplasmic dynein 1 light intermediate chain 1 OS=Homo sapiens GN=DYNC1LI1 PE=1 SV=3 0.856708 10.6482 6.06989E-05 110.57 99.292 110.57 1 S VHAELDRITRKPVTVSPTTPTSPTEGEAS__ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPXX KPVT(0.047)VS(0.857)PT(0.074)T(0.022)PTSPTEGEAS KPVT(-12.57)VS(10.65)PT(-10.65)T(-15.9)PT(-41.05)S(-51.67)PT(-73.34)EGEAS(-85.98) 6 3 0.49571 9306.7 0 0 13702 0 0 8924.6 0 0 13682 0 0 12518 0 0 10696 0 0 10014 0 0 11074 0 0 12779 0 0 13654 0 0 8805.1 0 0 12943 0 0 9047.8 0 0 14001 0 0 12458 0 0 10884 0 0 10390 0 0 11505 0 0 12492 0 0 13113 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 43572000 43572000 0 0 NaN 4266 2313 510 510 2175 2298 2474 2754 2474 2754 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12935 2474 2754 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12935 2474 2754 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12935 Q9Y6G9 421 Q9Y6G9 Q9Y6G9 Cytoplasmic dynein 1 light intermediate chain 1 DYNC1LI1 sp|Q9Y6G9|DC1L1_HUMAN Cytoplasmic dynein 1 light intermediate chain 1 OS=Homo sapiens GN=DYNC1LI1 PE=1 SV=3 0.995732 23.9132 6.70461E-05 113.42 93.871 113.42 1 S PRTPNRSVSSNVASVSPIPAGSKKIDPNMKA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPXXXXXXXX SVSSNVAS(0.004)VS(0.996)PIPAGSK S(-40.65)VS(-41.28)S(-41.9)NVAS(-23.91)VS(23.91)PIPAGS(-68)K 10 3 -1.552 15915 0 0 25879 0 0 16254 0 0 23359 0 0 19571 0 0 17152 0 0 21650 0 0 20910 0 0 26625 0 0 8218.3 0 0 15061 0 0 24432 0 0 16392 0 0 24038 0 0 19699 0 0 17532 0 0 22074 0 0 21076 0 0 26060 0 0 8222.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30715000 30715000 0 0 NaN 4267 2313 421 421 4575 4880 5198 5773 5198 5773 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14232 5198 5773 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14232 5198 5773 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14232 Q9Y6I3 435 Q9Y6I3 Q9Y6I3 Epsin-1 EPN1 sp|Q9Y6I3|EPN1_HUMAN Epsin-1 OS=Homo sapiens GN=EPN1 PE=1 SV=2 1 81.591 0.000143707 120.55 73.484 120.55 1 S SAGELELLAGEVPARSPGAFDMSGVRGSLAE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPXXXXX S(1)PGAFDMSGVR S(81.59)PGAFDMS(-81.59)GVR 1 2 -0.27094 11659 0 0 20845 0 0 11902 0 0 17672 0 0 10815 0 0 10344 0 0 9461.7 0 0 13631 0 0 21203 0 0 11479 0 0 11033 0 0 19674 0 0 11955 0 0 18221 0 0 11031 0 0 10758 0 0 10018 0 0 13892 0 0 20423 0 0 11125 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11069000 11069000 0 0 NaN 4268 2314 435 435 4097 4368 4658 5171 4658 5171 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15407 4658 5171 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15407 4658 5171 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15407 Q9Y6I3 419 Q9Y6I3 Q9Y6I3 Epsin-1 EPN1 sp|Q9Y6I3|EPN1_HUMAN Epsin-1 OS=Homo sapiens GN=EPN1 PE=1 SV=2 0.836441 7.48848 6.16548E-18 235.68 197.3 235.68 1 S FSDFDRLRTALPTSGSSAGELELLAGEVPAR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPPP TALPTS(0.014)GS(0.836)S(0.149)AGELELLAGEVPAR T(-50.92)ALPT(-32.35)S(-17.79)GS(7.49)S(-7.49)AGELELLAGEVPAR 8 3 0.14648 11031 0 0 11206 0 0 10504 0 0 12541 0 0 10258 0 0 10446 0 0 11713 0 0 15775 0 0 11704 0 0 125690 0 0 10436 0 0 10593 0 0 10607 0 0 12762 0 0 10445 0 0 10867 0 0 11853 0 0 19404 0 0 11549 0 0 118720 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 76873000 76873000 0 0 NaN 4269 2314 419 419 4615 4922 5242;5243 5822;5823 5242 5822 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23035 5242 5822 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23035 5242 5822 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23035 Q9Y6K1 105 Q9Y6K1 Q9Y6K1 DNA (cytosine-5)-methyltransferase 3A DNMT3A sp|Q9Y6K1|DNM3A_HUMAN DNA (cytosine-5)-methyltransferase 3A OS=Homo sapiens GN=DNMT3A PE=1 SV=4 1 88.361 1.25788E-05 136.04 118.55 136.04 1 S NGDLEKRSEPQPEEGSPAGGQKGGAPAEGEG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPXXXXXXXXX SEPQPEEGS(1)PAGGQK S(-88.36)EPQPEEGS(88.36)PAGGQK 9 3 0.49568 10002 0 0 7511.7 0 0 9471.4 0 0 7479.4 0 0 15688 0 0 10589 0 0 13497 0 0 11368 0 0 7456.9 0 0 3124 0 0 9462 0 0 7095.9 0 0 9639.7 0 0 7731.5 0 0 15517 0 0 10491 0 0 13679 0 0 11467 0 0 7614 0 0 3204.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16712000 16712000 0 0 NaN 4270 2315 105 105 3694 3929 4189 4655 4189 4655 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7979 4189 4655 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7979 4189 4655 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7979 Q9Y6K9 387 Q9Y6K9 Q9Y6K9 NF-kappa-B essential modulator IKBKG sp|Q9Y6K9|NEMO_HUMAN NF-kappa-B essential modulator OS=Homo sapiens GN=IKBKG PE=1 SV=2 1 77.3246 0.000173543 108.92 92.231 77.325 1 S PAYLSSPLALPSQRRSPPEEPPDFCCPKCQY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPXXX S(1)PPEEPPDFCCPK S(77.32)PPEEPPDFCCPK 1 3 -0.06635 33102 0 0 30870 0 0 33419 0 0 29018 0 0 27936 0 0 32590 0 0 27220 0 0 33147 0 0 34947 0 0 70581 0 0 31325 0 0 29151 0 0 33564 0 0 29965 0 0 28670 0 0 32648 0 0 27954 0 0 35354 0 0 34154 0 0 67228 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 26625000 26625000 0 0 NaN 4271 2316 387 387 3480;4137 3697;4410 3943;4701 4379;5217 4701 5217 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15216 3943 4379 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13116 3943 4379 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13116 Q9Y6M1 164 Q9Y6M1 Q9Y6M1 Insulin-like growth factor 2 mRNA-binding protein 2 IGF2BP2 sp|Q9Y6M1|IF2B2_HUMAN Insulin-like growth factor 2 mRNA-binding protein 2 OS=Homo sapiens GN=IGF2BP2 PE=1 SV=2 0.960494 13.9397 8.60207E-05 106.23 91.459 106.23 1 S SFKISYIPDEEVSSPSPPQRAQRGDHSSREQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPXXXXXXXXXXX ISYIPDEEVS(0.001)S(0.039)PS(0.96)PPQR IS(-89.74)Y(-90.11)IPDEEVS(-31.17)S(-13.94)PS(13.94)PPQR 13 3 -0.34531 8074.1 0 0 6852.5 0 0 6988.9 0 0 6688.7 0 0 5641.7 0 0 7598.4 0 0 6990.6 0 0 6471.4 0 0 6798.3 0 0 8754 0 0 7636.1 0 0 6472.4 0 0 7085.8 0 0 6892.4 0 0 5823.7 0 0 7578 0 0 7045.8 0 0 6798.7 0 0 6716.1 0 0 8392.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15408000 15408000 0 0 NaN 4272 2317 164 164 1957 2068 2232 2493 2232 2493 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17136 2232 2493 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17136 2232 2493 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17136 Q9Y6Q9 214 Q9Y6Q9 Q9Y6Q9 Nuclear receptor coactivator 3 NCOA3 sp|Q9Y6Q9|NCOA3_HUMAN Nuclear receptor coactivator 3 OS=Homo sapiens GN=NCOA3 PE=1 SV=1 1 64.0038 0.000224654 101.1 80.09 101.1 1 S MLMKTPHDILEDINASPEMRQRYETMQCFAL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPXXXXXXXXXXX TPHDILEDINAS(1)PEMR T(-64)PHDILEDINAS(64)PEMR 12 3 -1.2656 4841.3 0 0 6710.8 0 0 6881.2 0 0 7323.2 0 0 5544.2 0 0 7021.5 0 0 5030.4 0 0 6820 0 0 8429.7 0 0 7959.9 0 0 4588.8 0 0 6343 0 0 6794.4 0 0 7477 0 0 5701.2 0 0 7063.9 0 0 5238.3 0 0 7088.6 0 0 8173.4 0 0 7653 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7778700 7778700 0 0 NaN 4273 2318 214 214 4826 5151 5490 6108 5490 6108 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18413 5490 6108 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18413 5490 6108 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18413 Q9Y6R4 431 Q9Y6R4 Q9Y6R4 Mitogen-activated protein kinase kinase kinase 4 MAP3K4 sp|Q9Y6R4|M3K4_HUMAN Mitogen-activated protein kinase kinase kinase 4 OS=Homo sapiens GN=MAP3K4 PE=1 SV=2 0.991866 21.0045 0.011939 68.942 52.999 68.942 1 S IKNLSDIGWPVFEIPSPRPSKGNEPEYEGDD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPXXXXXXXXXX NLSDIGWPVFEIPS(0.992)PRPS(0.008)K NLS(-35.75)DIGWPVFEIPS(21)PRPS(-21)K 14 3 0.94669 28389 0 0 30874 0 0 28944 0 0 31308 0 0 17667 0 0 31287 0 0 17943 0 0 28353 0 0 30239 0 0 100410 0 0 26866 0 0 29169 0 0 28975 0 0 32119 0 0 18610 0 0 31514 0 0 18588 0 0 31579 0 0 29316 0 0 95201 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 43902000 43902000 0 0 NaN 4274 2319 431 431 2856 3027 3242 3598 3242 3598 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23564 3242 3598 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23564 3242 3598 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23564 Q9Y6X9 615 Q9Y6X9 Q9Y6X9 MORC family CW-type zinc finger protein 2 MORC2 sp|Q9Y6X9|MORC2_HUMAN MORC family CW-type zinc finger protein 2 OS=Homo sapiens GN=MORC2 PE=1 SV=2 1 83.3087 0.00966441 83.309 55.091 83.309 1 S RPSTEEPVRRPQRPRSPPLPAVIRNAPSRPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX S(1)PPLPAVIR S(83.31)PPLPAVIR 1 2 -0.1682 15425 0 0 24565 0 0 15845 0 0 23968 0 0 22587 0 0 17944 0 0 20286 0 0 21492 0 0 25274 0 0 4747.2 0 0 14598 0 0 23202 0 0 16009 0 0 24549 0 0 22495 0 0 18308 0 0 20896 0 0 21564 0 0 24726 0 0 4967.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 141370000 141370000 0 0 NaN 4275 2320 615 615 4141 4414 4705 5221 4705 5221 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17458 4705 5221 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17458 4705 5221 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17458 Q9Y6X9 743 Q9Y6X9 Q9Y6X9 MORC family CW-type zinc finger protein 2 MORC2 sp|Q9Y6X9|MORC2_HUMAN MORC family CW-type zinc finger protein 2 OS=Homo sapiens GN=MORC2 PE=1 SV=2 0.999741 35.8733 9.62064E-42 348.26 318.45 348.26 1 S KLSPATPSRKRSVAVSDEEEVEEEAERRKER X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPXXXX SVAVS(1)DEEEVEEEAER S(-35.87)VAVS(35.87)DEEEVEEEAER 5 2 -0.20255 5491.8 0 0 9147.9 0 0 5725.8 0 0 9005.5 0 0 10355 0 0 4793.2 0 0 10176 0 0 8417.3 0 0 9446.7 0 0 8703.2 0 0 5197.6 0 0 8640.9 0 0 5808.4 0 0 9187.6 0 0 10232 0 0 5054.3 0 0 10347 0 0 8565 0 0 9352 0 0 8389.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27646000 27646000 0 0 NaN 4276 2320 743 743 4547 4850 5167 5737 5167 5737 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14513 5167 5737 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14513 5167 5737 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14513 REV__A6NEH8 REV__A6NEH8 1 40.0015 0.0430189 40.002 20.215 40.002 1 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPXXXXXXXXXX NS(1)RGNPK NS(40)RGNPK 2 3 2.8336 10955 0 0 15471 0 0 11664 0 0 14366 0 0 18951 0 0 11241 0 0 18842 0 0 16222 0 0 14788 0 0 4331.5 0 0 10369 0 0 14609 0 0 11793 0 0 14768 0 0 18796 0 0 11478 0 0 19074 0 0 16209 0 0 14763 0 0 4454.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11125000 11125000 0 0 NaN + 4277 2321 57 57 2935 3113 3333 3695 3333 3695 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5297 3333 3695 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5297 3333 3695 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5297 REV__C9JQI7 REV__C9JQI7 0.98299 17.5302 0.0566042 44.203 18.817 44.203 2 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX LIEVS(0.983)Y(0.98)LY(0.037)K LIEVS(17.53)Y(16.87)LY(-16.87)K 5 3 -2.5841 0 18225 0 0 37345 0 0 19959 0 0 33651 0 0 8677.2 0 0 18215 0 0 10251 0 0 22455 0 0 36479 0 0 3079.4 0 0 17252 0 0 35257 0 0 19863 0 0 34529 0 0 9518.8 0 0 19006 0 0 11077 0 0 22452 0 0 34882 0 0 3419.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 71569000 0 71569000 0 NaN + 4278 2322 498 498 2406 2543 2736 3056 2736 3056 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16526 2736 3056 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16526 2736 3056 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16526 REV__O43242 REV__O43242 1 50.9777 0.0566042 50.978 12.702 50.978 1 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX RGAS(1)GEK RGAS(50.98)GEK 4 2 -0.066321 10103 0 0 15262 0 0 10263 0 0 15531 0 0 13356 0 0 10851 0 0 15470 0 0 14162 0 0 15800 0 0 4501.2 0 0 9560.5 0 0 14419 0 0 10367 0 0 15855 0 0 13401 0 0 11136 0 0 15655 0 0 14213 0 0 15576 0 0 4566.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 41257000 41257000 0 0 NaN + 4279 2323 529 529 3240 3437 3673 4076 3673 4076 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5107 3673 4076 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5107 3673 4076 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5107 REV__O43602 REV__O43602 0.999135 30.6258 0.0566042 63.816 11.1 63.816 1 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPXXXXXXXXXXXXXX MS(0.001)RGMRNS(0.999)K MS(-30.63)RGMRNS(30.63)K 8 2 3.6624 16066 0 0 15316 0 0 14775 0 0 12122 0 0 17909 0 0 12747 0 0 13585 0 0 12747 0 0 13443 0 0 18194 0 0 15197 0 0 14451 0 0 14982 0 0 12651 0 0 17928 0 0 12783 0 0 14032 0 0 13335 0 0 13270 0 0 17427 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 41604000 41604000 0 0 NaN + 4280 2324 346 346 2753 2921 3131 3479 3131 3479 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20282 3131 3479 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20282 3131 3479 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20282 REV__O43933 REV__O43933 1 54.1434 0.0566042 54.143 23.316 54.143 2 S X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX T(1)QLLNPS(1)LLFIK T(54.14)QLLNPS(54.14)LLFIK 7 3 3.1321 0 8470.7 0 0 3678.6 0 0 7932.7 0 0 4327.7 0 0 4903.3 0 0 7936.1 0 0 4772.3 0 0 5178.2 0 0 4121.3 0 0 18694 0 0 8013.4 0 0 3478.8 0 0 7981.4 0 0 4461.9 0 0 5152.3 0 0 7794.3 0 0 4846.3 0 0 5864.2 0 0 4094.1 0 0 17722 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 18295000 0 18295000 0 NaN + 4281 2325 765 765 4871 5196 5535 6153 5535 6153 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23964 5535 6153 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23964 5535 6153 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23964 REV__O60229 REV__O60229 0.5 0 0.0403928 46.319 6.658 46.319 1 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX EDS(0.5)LS(0.5)APIIDLELK EDS(0)LS(0)APIIDLELK 3 3 -3.8045 7577.9 0 0 12785 0 0 6329.8 0 0 12756 0 0 2556.7 0 0 6913.5 0 0 3443.3 0 0 8637.9 0 0 14964 0 0 41594 0 0 7166 0 0 12078 0 0 6401 0 0 13005 0 0 2840.7 0 0 7290.5 0 0 3777.9 0 0 9850.9 0 0 14276 0 0 39366 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37824000 37824000 0 0 NaN + 4282 2326 1728 1728 912 965 1046 1155 1046 1155 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24128 1046 1155 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24128 1046 1155 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24128 REV__O60229 REV__O60229 0.5 0 0.0403928 46.319 6.658 46.319 1 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EDS(0.5)LS(0.5)APIIDLELK EDS(0)LS(0)APIIDLELK 5 3 -3.8045 7577.9 0 0 12785 0 0 6329.8 0 0 12756 0 0 2556.7 0 0 6913.5 0 0 3443.3 0 0 8637.9 0 0 14964 0 0 41594 0 0 7166 0 0 12078 0 0 6401 0 0 13005 0 0 2840.7 0 0 7290.5 0 0 3777.9 0 0 9850.9 0 0 14276 0 0 39366 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37824000 37824000 0 0 NaN + 4283 2326 1730 1730 912 965 1046 1155 1046 1155 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24128 1046 1155 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24128 1046 1155 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24128 REV__O75881 REV__O75881 1 41.5403 0.0566042 41.54 8.9904 41.54 2 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX MAKLES(1)S(1)FKCIK MAKLES(41.54)S(41.54)FKCIK 6 4 2.6172 0 6269.8 0 0 7449.1 0 0 6743.8 0 0 6681 0 0 5545.8 0 0 6123.6 0 0 4719.4 0 0 6820.9 0 0 7880.7 0 0 2636.7 0 0 5934.6 0 0 7032.6 0 0 6747.2 0 0 6897.8 0 0 5690 0 0 6176.6 0 0 4930.2 0 0 6894.3 0 0 7641.8 0 0 2640.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 18541000 0 18541000 0 NaN + 4284 2327 256 256 2661 2809 3012 3351 3012 3351 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15576 3012 3351 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15576 3012 3351 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15576 REV__O75881 REV__O75881 1 41.5403 0.0566042 41.54 8.9904 41.54 2 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX MAKLES(1)S(1)FKCIK MAKLES(41.54)S(41.54)FKCIK 7 4 2.6172 0 6269.8 0 0 7449.1 0 0 6743.8 0 0 6681 0 0 5545.8 0 0 6123.6 0 0 4719.4 0 0 6820.9 0 0 7880.7 0 0 2636.7 0 0 5934.6 0 0 7032.6 0 0 6747.2 0 0 6897.8 0 0 5690 0 0 6176.6 0 0 4930.2 0 0 6894.3 0 0 7641.8 0 0 2640.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 18541000 0 18541000 0 NaN + 4285 2327 257 257 2661 2809 3012 3351 3012 3351 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15576 3012 3351 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15576 3012 3351 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15576 REV__P18627 REV__P18627 0.499994 0 0.0472994 53.557 25.063 53.557 1 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPXXXX PS(0.5)FS(0.5)CNLIVWDSR PS(0)FS(0)CNLIVWDS(-46.49)R 2 2 -1.4529 18727 0 0 15848 0 0 18288 0 0 16988 0 0 22688 0 0 19377 0 0 21008 0 0 18287 0 0 19043 0 0 4894.1 0 0 17718 0 0 14977 0 0 18490 0 0 17412 0 0 22739 0 0 19312 0 0 21411 0 0 18533 0 0 18873 0 0 5031.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27037000 27037000 0 0 NaN + 4286 2329 334 334 2985 3164 3387 3757 3387 3757 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10297 3387 3757 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10297 3387 3757 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10297 REV__P18627 REV__P18627 0.499994 0 0.0472994 53.557 25.063 53.557 1 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PS(0.5)FS(0.5)CNLIVWDSR PS(0)FS(0)CNLIVWDS(-46.49)R 4 2 -1.4529 18727 0 0 15848 0 0 18288 0 0 16988 0 0 22688 0 0 19377 0 0 21008 0 0 18287 0 0 19043 0 0 4894.1 0 0 17718 0 0 14977 0 0 18490 0 0 17412 0 0 22739 0 0 19312 0 0 21411 0 0 18533 0 0 18873 0 0 5031.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27037000 27037000 0 0 NaN + 4287 2329 336 336 2985 3164 3387 3757 3387 3757 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10297 3387 3757 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10297 3387 3757 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10297 REV__P35475 REV__P35475 1 41.2833 0.0404011 41.283 12.478 41.283 1 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX HLLGWS(1)LPR HLLGWS(41.28)LPR 6 3 -4.4221 66763 0 0 60305 0 0 55406 0 0 85125 0 0 74028 0 0 39284 0 0 29044 0 0 41151 0 0 72657 0 0 3737.5 0 0 63132 0 0 57109 0 0 56587 0 0 85152 0 0 73429 0 0 41453 0 0 32919 0 0 41318 0 0 69841 0 0 4471.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 136500000 136500000 0 0 NaN + 4288 2330 420 420 1724 1818 1963 2188 1963 2188 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12665 1963 2188 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12665 1963 2188 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12665 REV__Q14117 REV__Q14117 0.25 0 0.0566042 40.113 17.234 40.113 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP S(0.25)S(0.25)GMFPFQMHT(0.25)HT(0.25)DIGGPLVK S(0)S(0)GMFPFQMHT(0)HT(0)DIGGPLVK 1 2 -0.083992 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN + 4289 2332 442 442 4349 4635 4938 5482 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24213 4938 5482 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24213 4938 5482 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24213 REV__Q14117 REV__Q14117 0.25 0 0.0566042 40.113 17.234 40.113 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.25)S(0.25)GMFPFQMHT(0.25)HT(0.25)DIGGPLVK S(0)S(0)GMFPFQMHT(0)HT(0)DIGGPLVK 2 2 -0.083992 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN + 4290 2332 443 443 4349 4635 4938 5482 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24213 4938 5482 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24213 4938 5482 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24213 REV__Q15027 REV__Q15027 0.999968 44.9768 0.0157897 78.334 27.728 78.334 1 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPXXXXXXXXXX AS(1)AALYR AS(44.98)AALY(-44.98)R 2 2 0.025572 43027 0 0 29396 0 0 40099 0 0 33464 0 0 36969 0 0 45399 0 0 47935 0 0 42004 0 0 29039 0 0 2825.5 0 0 40704 0 0 27792 0 0 40528 0 0 34303 0 0 37838 0 0 44936 0 0 47750 0 0 42349 0 0 29454 0 0 3632.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 49467000 49467000 0 0 NaN + 4291 2333 685 685 431 460 495 555 495 555 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10599 495 555 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10599 495 555 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10599 REV__Q5T1M5 REV__Q5T1M5 1 78.0783 0.0114545 78.078 47.312 78.078 1 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPXXXXXXX NEILES(1)KIDNQEER NEILES(78.08)KIDNQEER 6 5 1.4121 20105 0 0 21836 0 0 22955 0 0 21130 0 0 20727 0 0 22474 0 0 23336 0 0 22799 0 0 23921 0 0 1265.5 0 0 19035 0 0 20624 0 0 22928 0 0 21760 0 0 21203 0 0 22473 0 0 23645 0 0 22894 0 0 23578 0 0 1719.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25434000 25434000 0 0 NaN + 4292 2334 624 624 2802 2971 3183 3535 3183 3535 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13050 3183 3535 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13050 3183 3535 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13050 REV__Q68CZ1 REV__Q68CZ1 1 40.0246 0.0447248 40.025 9.8912 40.025 1 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX QELS(1)CKCRLQK QELS(40.02)CKCRLQK 4 4 -0.88003 12153 0 0 15075 0 0 11706 0 0 17920 0 0 13158 0 0 13488 0 0 13055 0 0 15331 0 0 17178 0 0 1775.3 0 0 11498 0 0 14257 0 0 11831 0 0 18155 0 0 13270 0 0 13744 0 0 13407 0 0 15360 0 0 16774 0 0 2026.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27778000 27778000 0 0 NaN + 4293 2335 990 990 3015 3196 3419 3792 3419 3792 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9838 3419 3792 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9838 3419 3792 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9838 REV__Q70CQ2 REV__Q70CQ2 1 57.5496 0.0329922 57.55 31.445 57.55 1 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX LDEDS(1)ELLR LDEDS(57.55)ELLR 5 2 -3.8711 21524 0 0 14046 0 0 20313 0 0 15859 0 0 23194 0 0 21849 0 0 25166 0 0 19437 0 0 15187 0 0 16492 0 0 20362 0 0 13279 0 0 20563 0 0 16269 0 0 23386 0 0 21634 0 0 25249 0 0 20087 0 0 15409 0 0 15979 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27959000 27959000 0 0 NaN + 4294 2336 592 592 2308 2440 2629 2939 2629 2939 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14624 2629 2939 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14624 2629 2939 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14624 REV__Q7Z408 REV__Q7Z408 1 77.9225 0.0160297 77.923 20.875 77.923 1 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX IVS(1)MGIR IVS(77.92)MGIR 3 2 -2.9973 5782.2 0 0 13592 0 0 5856.8 0 0 13008 0 0 3628.5 0 0 5278.9 0 0 3826.8 0 0 7688.9 0 0 13532 0 0 3527.2 0 0 5471.7 0 0 12837 0 0 5866.3 0 0 13268 0 0 3825.8 0 0 5673.2 0 0 4151.6 0 0 7725.4 0 0 12941 0 0 3499.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26965000 26965000 0 0 NaN + 4295 2337 736 736 1981 2095 2259 2522 2259 2522 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17508 2259 2522 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17508 2259 2522 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17508 REV__Q8IUY3 REV__Q8IUY3 0.826167 6.8204 0.0463754 51.765 15.341 51.765 1 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX S(0.001)S(0.001)S(0.826)PQLHT(0.172)CR S(-30.98)S(-27.8)S(6.82)PQLHT(-6.82)CR 3 2 -3.1737 12051 0 0 16250 0 0 12625 0 0 15890 0 0 23429 0 0 13127 0 0 24435 0 0 18438 0 0 16731 0 0 10018 0 0 11405 0 0 15349 0 0 12814 0 0 16293 0 0 23144 0 0 13367 0 0 24613 0 0 18591 0 0 16835 0 0 9859.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20120000 20120000 0 0 NaN + 4296 2338 172 172 4448 4739 5044 5596 5044 5596 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11219 5044 5596 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11219 5044 5596 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11219 REV__Q8NET4 REV__Q8NET4 0.5 0 0.0489318 41.029 41.029 41.029 1 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX MGS(0.5)AT(0.5)RK MGS(0)AT(0)RK 3 3 -2.2974 34005 0 0 20959 0 0 31703 0 0 21226 0 0 17533 0 0 33059 0 0 17815 0 0 22849 0 0 21408 0 0 1192.3 0 0 32168 0 0 19801 0 0 31883 0 0 21968 0 0 18637 0 0 32483 0 0 18219 0 0 23351 0 0 20971 0 0 1651.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16669000 16669000 0 0 NaN + 4297 2340 895 895 2703 2865 3074 3421 3074 3421 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9019 3074 3421 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9019 3074 3421 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9019 REV__Q8TDH9 REV__Q8TDH9 0.333333 0 0.0566042 51.013 38.246 51.013 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPXXXXXXXX LQLVQS(0.333)LS(0.333)RDMT(0.333)R LQLVQS(0)LS(0)RDMT(0)R 6 3 2.9175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN + 4298 2341 85 85 2524 2666 2862 3192 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15167 2862 3192 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15167 2862 3192 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15167 REV__Q8TDH9 REV__Q8TDH9 0.333333 0 0.0566042 51.013 38.246 51.013 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LQLVQS(0.333)LS(0.333)RDMT(0.333)R LQLVQS(0)LS(0)RDMT(0)R 8 3 2.9175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN + 4299 2341 87 87 2524 2666 2862 3192 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15167 2862 3192 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15167 2862 3192 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15167 REV__Q92730 REV__Q92730 1 43.0266 0.0566042 43.027 13.679 43.027 2 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPXXXXXXXXX LS(1)LRS(1)VPK LS(43.03)LRS(43.03)VPK 2 2 1.9379 0 13706 0 0 13923 0 0 14854 0 0 10721 0 0 15175 0 0 13538 0 0 13806 0 0 13509 0 0 12537 0 0 15085 0 0 12973 0 0 13134 0 0 14893 0 0 11248 0 0 15360 0 0 13472 0 0 14084 0 0 14006 0 0 12424 0 0 14517 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 11794000 0 11794000 0 NaN + 4300 2344 29 29 2560 2704 2902 3236 2902 3236 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16403 2902 3236 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16403 2902 3236 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16403 REV__Q92730 REV__Q92730 1 43.0266 0.0566042 43.027 13.679 43.027 2 S X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX LS(1)LRS(1)VPK LS(43.03)LRS(43.03)VPK 5 2 1.9379 0 13706 0 0 13923 0 0 14854 0 0 10721 0 0 15175 0 0 13538 0 0 13806 0 0 13509 0 0 12537 0 0 15085 0 0 12973 0 0 13134 0 0 14893 0 0 11248 0 0 15360 0 0 13472 0 0 14084 0 0 14006 0 0 12424 0 0 14517 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 11794000 0 11794000 0 NaN + 4301 2344 32 32 2560 2704 2902 3236 2902 3236 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16403 2902 3236 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16403 2902 3236 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16403 REV__Q96GW7 REV__Q96GW7 1 48.8228 0.0566042 48.823 35.842 48.823 3 S X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX T(1)GS(1)NDES(1)PAELR T(48.82)GS(48.82)NDES(48.82)PAELR 3 3 -2.8179 0 0 6874.9 0 0 4033.6 0 0 7014.6 0 0 4194.8 0 0 5892.9 0 0 7272.6 0 0 5748.1 0 0 6469.7 0 0 4772.9 0 0 3580.5 0 0 6505.9 0 0 3811.3 0 0 7041.2 0 0 4346.7 0 0 6043.4 0 0 7149 0 0 5831.3 0 0 6628.6 0 0 4750.8 0 0 3521.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 10073000 0 0 10073000 NaN + 4302 2345 297 297 4729 5042 5372 5974 5372 5974 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16404 5372 5974 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16404 5372 5974 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16404 REV__Q96GW7 REV__Q96GW7 1 48.8228 0.0566042 48.823 35.842 48.823 3 S X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX T(1)GS(1)NDES(1)PAELR T(48.82)GS(48.82)NDES(48.82)PAELR 7 3 -2.8179 0 0 6874.9 0 0 4033.6 0 0 7014.6 0 0 4194.8 0 0 5892.9 0 0 7272.6 0 0 5748.1 0 0 6469.7 0 0 4772.9 0 0 3580.5 0 0 6505.9 0 0 3811.3 0 0 7041.2 0 0 4346.7 0 0 6043.4 0 0 7149 0 0 5831.3 0 0 6628.6 0 0 4750.8 0 0 3521.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 10073000 0 0 10073000 NaN + 4303 2345 301 301 4729 5042 5372 5974 5372 5974 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16404 5372 5974 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16404 5372 5974 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16404 REV__Q99700 REV__Q99700 0.640444 2.67165 0.0566042 45.696 23.059 45.696 2 S X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPXXXXXXXX MMNAY(0.359)IGDFS(0.64)IT(0.512)S(0.488)QPLK MMNAY(-2.67)IGDFS(2.67)IT(0.33)S(-0.33)QPLK 10 3 -0.65648 0 11464 0 0 19650 0 0 13545 0 0 19328 0 0 15497 0 0 13775 0 0 15586 0 0 20712 0 0 21686 0 0 47125 0 0 10856 0 0 18560 0 0 13543 0 0 19776 0 0 15618 0 0 14231 0 0 16028 0 0 21926 0 0 21138 0 0 44853 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 64519000 0 64519000 0 NaN + 4304 2346 1056 1056 2715 2881 3090 3437 3090 3437 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23868 3090 3437 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23868 3090 3437 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23868 REV__Q9H329 REV__Q9H329 1 43.4925 0.0566042 43.492 20.465 43.492 2 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX S(1)FDKMT(1)K S(43.49)FDKMT(43.49)K 1 2 -1.92 0 16342 0 0 29855 0 0 17457 0 0 26067 0 0 49933 0 0 15831 0 0 47836 0 0 32000 0 0 26589 0 0 23335 0 0 15468 0 0 28181 0 0 17908 0 0 26832 0 0 48705 0 0 16572 0 0 48212 0 0 32175 0 0 27137 0 0 22713 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 24643000 0 24643000 0 NaN + 4305 2348 582 582 3733 3974 4238 4711 4238 4711 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14570 4238 4711 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14570 4238 4711 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14570 REV__Q9HA90 REV__Q9HA90 0.5 0 0.0507286 43.813 8.9615 43.813 1 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX ELS(0.5)S(0.5)NEEERLAR ELS(0)S(0)NEEERLAR 3 4 -3.5726 8385.7 0 0 7298.1 0 0 8049.8 0 0 7306.5 0 0 11984 0 0 8379.8 0 0 12237 0 0 9669.4 0 0 7742.4 0 0 323.28 0 0 7933.8 0 0 6894.3 0 0 8173.6 0 0 7518.8 0 0 11929 0 0 8368.4 0 0 12321 0 0 9658.9 0 0 7830.1 0 0 528.19 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 36363000 36363000 0 0 NaN + 4306 2349 390 390 1055 1111 1199 1318 1199 1318 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11613 1199 1318 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11613 1199 1318 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11613 REV__Q9HA90 REV__Q9HA90 0.5 0 0.0507286 43.813 8.9615 43.813 1 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ELS(0.5)S(0.5)NEEERLAR ELS(0)S(0)NEEERLAR 4 4 -3.5726 8385.7 0 0 7298.1 0 0 8049.8 0 0 7306.5 0 0 11984 0 0 8379.8 0 0 12237 0 0 9669.4 0 0 7742.4 0 0 323.28 0 0 7933.8 0 0 6894.3 0 0 8173.6 0 0 7518.8 0 0 11929 0 0 8368.4 0 0 12321 0 0 9658.9 0 0 7830.1 0 0 528.19 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 36363000 36363000 0 0 NaN + 4307 2349 391 391 1055 1111 1199 1318 1199 1318 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11613 1199 1318 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11613 1199 1318 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11613 REV__Q9UHK6 REV__Q9UHK6 0.571161 1.31203 0.0382282 53.166 19.089 53.166 1 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX LS(0.007)VDRY(0.422)S(0.571)GR LS(-19.37)VDRY(-1.31)S(1.31)GR 7 2 -2.451 62225 0 0 34025 0 0 61307 0 0 31577 0 0 82342 0 0 59021 0 0 86714 0 0 62922 0 0 29271 0 0 3073.8 0 0 58878 0 0 32128 0 0 62052 0 0 33012 0 0 82327 0 0 57990 0 0 86484 0 0 63056 0 0 31318 0 0 4350.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 146750000 146750000 0 0 NaN + 4308 2351 344 344 2607 2754 2953 3290 2953 3290 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8723 2953 3290 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8723 2953 3290 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8723 REV__Q9ULD4 REV__Q9ULD4 0.999756 36.1175 0.0566042 44.98 44.98 44.98 1 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPXXXXXXXXXXXXXX VRTAGS(1)R VRT(-36.12)AGS(36.12)R 6 2 -1.3488 10807 0 0 18538 0 0 11326 0 0 19254 0 0 17098 0 0 11132 0 0 17216 0 0 17593 0 0 19827 0 0 23242 0 0 10229 0 0 17516 0 0 11446 0 0 19595 0 0 17014 0 0 11645 0 0 17591 0 0 18097 0 0 19453 0 0 22292 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 58004000 58004000 0 0 NaN + 4309 2352 445 445 5235 5580 5948 6612 5948 6612 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5285 5948 6612 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5285 5948 6612 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5285 REV__Q9ULL8 REV__Q9ULL8 1 44.3093 0.0378636 44.309 16.567 44.309 1 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX LRDPS(1)PK LRDPS(44.31)PK 5 3 -0.21092 31355 0 0 26027 0 0 34827 0 0 20202 0 0 47693 0 0 27546 0 0 38508 0 0 28824 0 0 22386 0 0 2626.5 0 0 29683 0 0 24553 0 0 35010 0 0 21216 0 0 47494 0 0 27304 0 0 39197 0 0 28942 0 0 22772 0 0 3140.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 35547000 35547000 0 0 NaN + 4310 2353 846 846 2533 2676 2872 3204 2872 3204 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6688 2872 3204 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6688 2872 3204 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6688 REV__Q9Y4G8 REV__Q9Y4G8 1 42.2873 0.0407317 42.287 6.8493 42.287 1 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPXXXXXXXXXXXXXX PQPLIS(1)R PQPLIS(42.29)R 6 3 -4.1825 105270 0 0 65452 0 0 93304 0 0 106960 0 0 52682 0 0 58080 0 0 26963 0 0 55601 0 0 92259 0 0 1742.9 0 0 99569 0 0 62066 0 0 94094 0 0 106500 0 0 55559 0 0 60371 0 0 30469 0 0 55920 0 0 88263 0 0 2927.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 190080000 190080000 0 0 NaN + 4311 2354 957 957 2983 3162 3385 3755 3385 3755 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5576 3385 3755 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5576 3385 3755 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5576 REV__Q9Y5G7 REV__Q9Y5G7 1 42.2093 0.0566042 42.209 11.337 42.209 2 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPXXXXXXX FS(1)S(1)PAANELK FS(42.21)S(42.21)PAANELK 2 3 -3.9743 0 5596 0 0 6964.2 0 0 6209.6 0 0 6889.1 0 0 20522 0 0 6820 0 0 21749 0 0 11522 0 0 6120 0 0 3533.2 0 0 5297.6 0 0 6578.4 0 0 6395 0 0 7077 0 0 19983 0 0 6904.7 0 0 21651 0 0 11482 0 0 6701.4 0 0 3593.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 53506000 0 53506000 0 NaN + 4312 2355 783 783 1328 1401 1508 1670 1508 1670 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16863 1508 1670 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16863 1508 1670 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16863 REV__Q9Y5G7 REV__Q9Y5G7 1 42.2093 0.0566042 42.209 11.337 42.209 2 S X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX FS(1)S(1)PAANELK FS(42.21)S(42.21)PAANELK 3 3 -3.9743 0 5596 0 0 6964.2 0 0 6209.6 0 0 6889.1 0 0 20522 0 0 6820 0 0 21749 0 0 11522 0 0 6120 0 0 3533.2 0 0 5297.6 0 0 6578.4 0 0 6395 0 0 7077 0 0 19983 0 0 6904.7 0 0 21651 0 0 11482 0 0 6701.4 0 0 3593.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 53506000 0 53506000 0 NaN + 4313 2355 784 784 1328 1401 1508 1670 1508 1670 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16863 1508 1670 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16863 1508 1670 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16863 A8CG34;A6NF01;Q96HA1 424;31;447 A8CG34;Q96HA1 Q96HA1 Nuclear envelope pore membrane protein POM 121C;Putative nuclear envelope pore membrane protein POM 121B;Nuclear envelope pore membrane protein POM 121 POM121C;POM121B;POM121 sp|A8CG34|P121C_HUMAN Nuclear envelope pore membrane protein POM 121C OS=Homo sapiens GN=POM121C PE=1 SV=2;sp|A6NF01|P121B_HUMAN Putative nuclear envelope pore membrane protein POM 121B OS=Homo sapiens GN=POM121B PE=5 SV=2;sp|Q96HA1|P121A_HUMAN Nuclear env 0.971882 15.3863 0.0161791 79.492 69.166 63.16 1 T PSSSPFSSPASSRSQTPERPAKKIREEELCH X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX S(0.028)QT(0.972)PERPAKK S(-15.39)QT(15.39)PERPAKK 3 4 -0.06659 18733 0 0 19172 0 0 18956 0 0 19692 0 0 18275 0 0 20307 0 0 17577 0 0 18110 0 0 21091 0 0 2457.4 0 0 17727 0 0 18114 0 0 19065 0 0 20198 0 0 18579 0 0 20305 0 0 18021 0 0 18325 0 0 20662 0 0 2733 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15983000 15983000 0 0 NaN 4314 15;1688 424;447 447 4256;4257 4535;4536 4834;4835 5365;5366 4835 5366 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6468 4834 5365 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6254 4835 5366 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6468 Q13765;E9PAV3 161;2024 Q13765 Q13765 Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form NACA sp|Q13765|NACA_HUMAN Nascent polypeptide-associated complex subunit alpha OS=Homo sapiens GN=NACA PE=1 SV=1;sp|E9PAV3|NACAM_HUMAN Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Homo sapiens GN=NACA PE=1 SV=1 0.983668 17.8201 5.53813E-18 223.1 195.77 223.1 1 T QGEAVSNIQENTQTPTVQEESEEEEVDETGV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP VQGEAVSNIQENTQTPT(0.984)VQEES(0.016)EEEEVDETGVEVK VQGEAVS(-129.76)NIQENT(-86.11)QT(-40.77)PT(17.82)VQEES(-17.82)EEEEVDET(-74.9)GVEVK 17 4 -0.10898 9827.5 0 0 11259 0 0 10532 0 0 11132 0 0 8694.9 0 0 8864.1 0 0 8924.3 0 0 12807 0 0 10101 0 0 194650 0 0 9301.9 0 0 10636 0 0 10543 0 0 11401 0 0 8936.4 0 0 9402.1 0 0 9105.4 0 0 18559 0 0 9916.6 0 0 183590 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 781020000 781020000 0 0 NaN 4315 28 161 161 5222 5566 5933 6594;6595;6596;6597 5933 6594 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17479 5933 6594 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17479 5933 6594 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17479 O00570;P41225 126;214 O00570 O00570 Transcription factor SOX-1;Transcription factor SOX-3 SOX1;SOX3 sp|O00570|SOX1_HUMAN Transcription factor SOX-1 OS=Homo sapiens GN=SOX1 PE=1 SV=2;sp|P41225|SOX3_HUMAN Transcription factor SOX-3 OS=Homo sapiens GN=SOX3 PE=1 SV=2 1 63.2832 0.0131387 63.283 21.304 63.283 2 T HMKEHPDYKYRPRRKTKTLLKKDKYSLAGGL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPXXXXXXXXXX KT(1)KT(1)LLK KT(63.28)KT(63.28)LLK 2 3 2.0566 0 47143 0 0 40798 0 0 45730 0 0 41479 0 0 39553 0 0 44108 0 0 40470 0 0 39997 0 0 42092 0 0 5439 0 0 44604 0 0 38544 0 0 46055 0 0 42590 0 0 40518 0 0 44053 0 0 41196 0 0 40443 0 0 41464 0 0 6047.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 76587000 0 76587000 0 NaN 4316 55 126 126 2247 2375 2556 2853 2556 2853 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14688 2556 2853 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14688 2556 2853 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14688 O00570;P41225 128;216 O00570 O00570 Transcription factor SOX-1;Transcription factor SOX-3 SOX1;SOX3 sp|O00570|SOX1_HUMAN Transcription factor SOX-1 OS=Homo sapiens GN=SOX1 PE=1 SV=2;sp|P41225|SOX3_HUMAN Transcription factor SOX-3 OS=Homo sapiens GN=SOX3 PE=1 SV=2 1 63.2832 0.0131387 63.283 21.304 63.283 2 T KEHPDYKYRPRRKTKTLLKKDKYSLAGGLLA X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX KT(1)KT(1)LLK KT(63.28)KT(63.28)LLK 4 3 2.0566 0 47143 0 0 40798 0 0 45730 0 0 41479 0 0 39553 0 0 44108 0 0 40470 0 0 39997 0 0 42092 0 0 5439 0 0 44604 0 0 38544 0 0 46055 0 0 42590 0 0 40518 0 0 44053 0 0 41196 0 0 40443 0 0 41464 0 0 6047.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 76587000 0 76587000 0 NaN 4317 55 128 128 2247 2375 2556 2853 2556 2853 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14688 2556 2853 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14688 2556 2853 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14688 O14497 1599 O14497 O14497 AT-rich interactive domain-containing protein 1A ARID1A sp|O14497|ARI1A_HUMAN AT-rich interactive domain-containing protein 1A OS=Homo sapiens GN=ARID1A PE=1 SV=3 0.498663 0 6.40913E-07 146.64 118.34 89.566 T QVSSPAPLPRPMENRTSPSKSPFLHSGMKMQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPXX T(0.499)S(0.499)PS(0.002)KSPFLHSGMK T(0)S(0)PS(-23.36)KS(-31.26)PFLHS(-52.93)GMK 1 4 1.9962 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4318 57 1599 1599 4944 5270;5271;5272 5613 6238 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12524 5615 6240 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14280 5615 6240 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14280 O14974 443 O14974 O14974 Protein phosphatase 1 regulatory subunit 12A PPP1R12A sp|O14974|MYPT1_HUMAN Protein phosphatase 1 regulatory subunit 12A OS=Homo sapiens GN=PPP1R12A PE=1 SV=1 0.596825 1.70354 3.25776E-07 167.29 143.61 167.29 1 T RKDESPATWRLGLRKTGSYGALAEITASKEG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPXX T(0.597)GS(0.403)YGALAEITASK T(1.7)GS(-1.7)Y(-57.45)GALAEIT(-113.53)AS(-135.61)K 1 3 0.13087 11769 0 0 15588 0 0 13992 0 0 13751 0 0 15030 0 0 13523 0 0 17080 0 0 14404 0 0 15038 0 0 9242.8 0 0 11145 0 0 14715 0 0 13978 0 0 14227 0 0 15218 0 0 13593 0 0 17232 0 0 14693 0 0 14925 0 0 9036.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 164510000 164510000 0 0 NaN 4319 73 443 443 4736 5051 5383 5986 5383 5986 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19767 5383 5986 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19767 5383 5986 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19767 O15027 1876 O15027 O15027 Protein transport protein Sec16A SEC16A sp|O15027|SC16A_HUMAN Protein transport protein Sec16A OS=Homo sapiens GN=SEC16A PE=1 SV=3 0.993776 22.0322 0.0226852 71.221 35.313 71.221 1 T SELSEENFDGKFANLTPSRTVPDSEAPPGWD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX FANLT(0.994)PS(0.006)R FANLT(22.03)PS(-22.03)R 5 2 -0.63157 14359 0 0 16307 0 0 15139 0 0 14673 0 0 11282 0 0 15489 0 0 10748 0 0 13939 0 0 16124 0 0 3081.2 0 0 13590 0 0 15395 0 0 15151 0 0 15178 0 0 11674 0 0 15475 0 0 11113 0 0 14134 0 0 15681 0 0 3223.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15051000 15051000 0 0 NaN 4320 75 1876 1876 1237 1302 1402 1554 1402 1554 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14001 1402 1554 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14001 1402 1554 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14001 O15027 1262 O15027 O15027 Protein transport protein Sec16A SEC16A sp|O15027|SC16A_HUMAN Protein transport protein Sec16A OS=Homo sapiens GN=SEC16A PE=1 SV=3 0.556464 1.73221 1.09588E-12 196.89 180.62 196.89 1 T ADTVWPAMEQVSSRPTSPEKFSVPHVCARFG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX SNFSSGPGFPEYGYPADTVWPAMEQVS(0.042)S(0.028)RPT(0.556)S(0.373)PEK S(-184.54)NFS(-184.44)S(-180.97)GPGFPEY(-139.94)GY(-115.76)PADT(-64.76)VWPAMEQVS(-11.25)S(-12.93)RPT(1.73)S(-1.73)PEK 31 4 -2.3081 7410.4 0 0 11998 0 0 7943.5 0 0 11571 0 0 9001.7 0 0 9138.9 0 0 8943.2 0 0 13181 0 0 12345 0 0 92936 0 0 7014.1 0 0 11332 0 0 7980.9 0 0 11868 0 0 9074.8 0 0 9494.6 0 0 9199.4 0 0 15865 0 0 12036 0 0 87815 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 13557000 13557000 0 0 NaN 4321 75 1262 1262 4042 4311 4600 5108;5109 4600 5109 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23099 4600 5109 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23099 4600 5109 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23099 O15042 919 O15042 O15042 U2 snRNP-associated SURP motif-containing protein U2SURP sp|O15042|SR140_HUMAN U2 snRNP-associated SURP motif-containing protein OS=Homo sapiens GN=U2SURP PE=1 SV=2 0.999208 31.0089 0.00383283 97.716 81.617 97.716 1 T KLESRSKDKKEKDECTPTRKERKRRHSTSPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX EKDECT(0.999)PT(0.001)R EKDECT(31.01)PT(-31.01)R 6 3 -0.27203 50522 0 0 59651 0 0 51478 0 0 58662 0 0 44717 0 0 52735 0 0 42216 0 0 54672 0 0 60231 0 0 7430.8 0 0 47810 0 0 56344 0 0 51693 0 0 60197 0 0 45760 0 0 53162 0 0 43586 0 0 54989 0 0 58666 0 0 8262.3 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 262530000 262530000 0 0 NaN 4322 77 919 919 1004;1005 1060;1061 1147;1148 1265;1266 1147 1265 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5976 1147 1265 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5976 1147 1265 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5976 O15126 45 O15126 O15126 Secretory carrier-associated membrane protein 1 SCAMP1 sp|O15126|SCAM1_HUMAN Secretory carrier-associated membrane protein 1 OS=Homo sapiens GN=SCAMP1 PE=1 SV=2 0.42609 0 9.77785E-05 103.95 89.938 103.95 T VPPGLDEYNPFSDSRTPPPGGVKMPNVPNTQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NVPPGLDEY(0.001)NPFS(0.147)DS(0.426)RT(0.426)PPPGGVK NVPPGLDEY(-28.84)NPFS(-4.61)DS(0)RT(0)PPPGGVK 17 4 0.60991 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4323 79 45 45 2958 3137 3359 3724 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20098 3359 3724 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20098 3359 3724 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20098 O15231 447 O15231 O15231 Zinc finger protein 185 ZNF185 sp|O15231|ZN185_HUMAN Zinc finger protein 185 OS=Homo sapiens GN=ZNF185 PE=1 SV=3 0.818334 6.53657 0.0069888 89.773 66.871 89.773 1 T QGDPAVPAQQPADPSTPERQSSPSGSEQLVR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX GGQGDPAVPAQQPADPS(0.182)T(0.818)PER GGQGDPAVPAQQPADPS(-6.54)T(6.54)PER 18 3 1.779 10053 0 0 6997.3 0 0 10807 0 0 6156.5 0 0 7303.1 0 0 10816 0 0 7377.8 0 0 7668.3 0 0 6366.4 0 0 4143.9 0 0 9515.8 0 0 6605.3 0 0 10796 0 0 6447.5 0 0 7618.3 0 0 10602 0 0 7478.7 0 0 7938.7 0 0 6324.7 0 0 4079.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 34359000 34359000 0 0 NaN 4324 84 447 447 1445 1522 1632 1802 1632 1802 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9005 1632 1802 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9005 1632 1802 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9005 O15400 79 O15400 O15400 Syntaxin-7 STX7 sp|O15400|STX7_HUMAN Syntaxin-7 OS=Homo sapiens GN=STX7 PE=1 SV=4 0.752615 5.13642 0.00032357 104.81 81.687 104.81 1 T KETDKYIKEFGSLPTTPSEQRQRKIQKDRLV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPXXXXXXXXXX EFGSLPT(0.231)T(0.753)PS(0.017)EQR EFGS(-35.58)LPT(-5.14)T(5.14)PS(-16.58)EQR 8 2 0.82568 20534 0 0 26453 0 0 23434 0 0 25665 0 0 22492 0 0 20890 0 0 24131 0 0 25295 0 0 27099 0 0 23075 0 0 19441 0 0 24985 0 0 23421 0 0 26324 0 0 22906 0 0 21251 0 0 24566 0 0 25897 0 0 26613 0 0 22313 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 32114000 32114000 0 0 NaN 4325 91 79 79 942 996 1080;1081 1192;1193 1081 1193 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14740 1081 1193 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14740 1081 1193 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14740 O15439 646 O15439 O15439 Multidrug resistance-associated protein 4 ABCC4 sp|O15439|MRP4_HUMAN Multidrug resistance-associated protein 4 OS=Homo sapiens GN=ABCC4 PE=1 SV=3 0.990517 20.1891 5.88149E-07 151 131.79 151 1 T LKKDNEESEQPPVPGTPTLRNRTFSESSVWS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPXXXXXXXXXXX KDNEESEQPPVPGT(0.991)PT(0.009)LR KDNEES(-101.48)EQPPVPGT(20.19)PT(-20.19)LR 14 3 1.1514 10636 0 0 13684 0 0 12042 0 0 11761 0 0 23389 0 0 13614 0 0 27841 0 0 18417 0 0 14405 0 0 14996 0 0 10069 0 0 12916 0 0 12192 0 0 12223 0 0 23116 0 0 13651 0 0 27758 0 0 18739 0 0 14783 0 0 14547 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25499000 25499000 0 0 NaN 4326 93 646 646 2028 2146 2312 2579 2312 2579 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12245 2312 2579 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12245 2312 2579 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12245 Q6A1A2;O15530 218;245 Q6A1A2 Q6A1A2 Putative 3-phosphoinositide-dependent protein kinase 2;3-phosphoinositide-dependent protein kinase 1 PDPK2P;PDPK1 sp|Q6A1A2|PDPK2_HUMAN Putative 3-phosphoinositide-dependent protein kinase 2 OS=Homo sapiens GN=PDPK2P PE=5 SV=1;sp|O15530|PDPK1_HUMAN 3-phosphoinositide-dependent protein kinase 1 OS=Homo sapiens GN=PDPK1 PE=1 SV=1 0.516372 0.28484 5.43297E-08 171.35 148.13 171.35 1 T LSPESKQARANSFVGTAQYVSPELLTEKSAC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPXXX ANS(0.484)FVGT(0.516)AQYVSPELLTEK ANS(-0.28)FVGT(0.28)AQY(-44)VS(-45.11)PELLT(-85.07)EK 7 2 0.51252 3689 0 0 5091 0 0 4306 0 0 4141.8 0 0 3125.1 0 0 5022.6 0 0 3787.3 0 0 5188.4 0 0 4324.4 0 0 27088 0 0 3493 0 0 4803.9 0 0 4287.2 0 0 4324.8 0 0 3251 0 0 5048.2 0 0 3838.1 0 0 6014.2 0 0 4244.1 0 0 25627 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8139500 8139500 0 0 NaN 4327 96 218 218 344 370 401 442 401 442 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22712 401 442 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22712 401 442 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22712 O43314 491 O43314 O43314 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 PPIP5K2 sp|O43314|VIP2_HUMAN Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 OS=Homo sapiens GN=PPIP5K2 PE=1 SV=3 0.456283 0 2.40963E-05 128.52 97.568 128.52 T NRKVQLTYLPHGCPKTSSEEEDSRREEPSLL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP T(0.456)S(0.456)S(0.087)EEEDSRREEPSLLLVLK T(0)S(0)S(-7.18)EEEDS(-54.12)RREEPS(-63.46)LLLVLK 1 4 -0.048655 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4328 105 491 491 4954 5282 5625 6252 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21006 5625 6252 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21006 5625 6252 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21006 O43561 39 O43561 O43561 Linker for activation of T-cells family member 1 LAT sp|O43561|LAT_HUMAN Linker for activation of T-cells family member 1 OS=Homo sapiens GN=LAT PE=1 SV=1 0.926323 11.1555 6.29478E-23 279.29 230.14 279.29 1 T ALCVHCHRLPGSYDSTSSDSLYPRGIQFKRP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPXXXXXXX LPGSYDS(0.003)T(0.926)S(0.071)SDSLYPR LPGS(-65.76)Y(-170.3)DS(-25.49)T(11.16)S(-11.16)S(-41.16)DS(-73.09)LY(-206.47)PR 8 2 -0.22434 5466.4 0 0 6102.5 0 0 6704.8 0 0 6187.3 0 0 24673 0 0 6056.9 0 0 30853 0 0 15902 0 0 5779.1 0 0 37204 0 0 5177.2 0 0 5765.3 0 0 6911.8 0 0 6345.7 0 0 24041 0 0 6270.4 0 0 30423 0 0 16690 0 0 6765.7 0 0 35400 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 41271000 41271000 0 0 NaN 4329 117 39 39 2497 2636 2830 3157;3158 2830 3158 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17574 2830 3158 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17574 2830 3158 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17574 O43765 81 O43765 O43765 Small glutamine-rich tetratricopeptide repeat-containing protein alpha SGTA sp|O43765|SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Homo sapiens GN=SGTA PE=1 SV=1 0.991958 22.8476 3.88965E-05 133.1 111.75 133.1 1 T ATGKEMPQDLRSPARTPPSEEDSAEAERLKT X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPXXX S(0.005)PART(0.992)PPS(0.003)EEDSAEAER S(-22.85)PART(22.85)PPS(-25.36)EEDS(-55.45)AEAER 5 3 -2.4412 7568.5 0 0 6425.2 0 0 8076.1 0 0 6752.7 0 0 7371.3 0 0 8363 0 0 6530.5 0 0 8363.7 0 0 6761.8 0 0 3175.9 0 0 7163.6 0 0 6071.5 0 0 8092.8 0 0 6939.4 0 0 7510.4 0 0 8316.8 0 0 6694.2 0 0 8485 0 0 6662.1 0 0 3184 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17396000 17396000 0 0 NaN 4330 127 81 81 4076 4346 4636 5149 4636 5149 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6536 4636 5149 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6536 4636 5149 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6536 O60271 217 O60271 O60271 C-Jun-amino-terminal kinase-interacting protein 4 SPAG9 sp|O60271|JIP4_HUMAN C-Jun-amino-terminal kinase-interacting protein 4 OS=Homo sapiens GN=SPAG9 PE=1 SV=4 0.999999 62.1629 0.0197966 81.487 66.233 81.487 1 T ISLGIFPLPAGDGLLTPDAQKGGETPGSEQW X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX ERPISLGIFPLPAGDGLLT(1)PDAQK ERPIS(-62.16)LGIFPLPAGDGLLT(62.16)PDAQK 19 3 1.1644 6939.7 0 0 14954 0 0 10785 0 0 14325 0 0 11492 0 0 9717.2 0 0 12454 0 0 14108 0 0 15762 0 0 72449 0 0 6581.2 0 0 14123 0 0 10649 0 0 14673 0 0 11638 0 0 10137 0 0 12722 0 0 16165 0 0 15412 0 0 68546 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28951000 28951000 0 0 NaN 4331 139 217 217 1122 1181 1271 1398 1271 1398 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23574 1271 1398 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23574 1271 1398 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23574 O60271 226 O60271 O60271 C-Jun-amino-terminal kinase-interacting protein 4 SPAG9 sp|O60271|JIP4_HUMAN C-Jun-amino-terminal kinase-interacting protein 4 OS=Homo sapiens GN=SPAG9 PE=1 SV=4 0.922881 10.7798 0.00011619 127.02 52.177 127.02 1 T AGDGLLTPDAQKGGETPGSEQWKFQELSQPR X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX GGET(0.923)PGS(0.077)EQWK GGET(10.78)PGS(-10.78)EQWK 4 2 -1.2675 12582 0 0 26745 0 0 13326 0 0 26256 0 0 23837 0 0 12436 0 0 21241 0 0 21611 0 0 29994 0 0 12766 0 0 11909 0 0 25262 0 0 13500 0 0 26767 0 0 23541 0 0 13221 0 0 21986 0 0 21706 0 0 29224 0 0 12520 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17481000 17481000 0 0 NaN 4332 139 226 226 1430 1507 1616 1786 1616 1786 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12721 1616 1786 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12721 1616 1786 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12721 O60271 365 O60271 O60271 C-Jun-amino-terminal kinase-interacting protein 4 SPAG9 sp|O60271|JIP4_HUMAN C-Jun-amino-terminal kinase-interacting protein 4 OS=Homo sapiens GN=SPAG9 PE=1 SV=4 0.918043 10.5329 0.00892571 93.178 45.604 93.178 1 T ELDMDKDLSGYKGSSTPTKGIENKAFDRNTE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX GSS(0.081)T(0.918)PTK GS(-33.13)S(-10.53)T(10.53)PT(-34.74)K 4 2 0.36382 12003 0 0 15822 0 0 10738 0 0 17600 0 0 9964.9 0 0 10867 0 0 9868.9 0 0 14608 0 0 18317 0 0 4150.7 0 0 11353 0 0 14956 0 0 10876 0 0 17855 0 0 10165 0 0 11247 0 0 10282 0 0 14633 0 0 17715 0 0 4246.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7896000 7896000 0 0 NaN 4333 139 365 365 1641 1729 1868 2081 1868 2081 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6412 1868 2081 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6412 1868 2081 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6412 O60825 16 O60825 O60825 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase PFKFB2 sp|O60825|F262_HUMAN 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 OS=Homo sapiens GN=PFKFB2 PE=1 SV=2 0.47344 0 0.0441533 44.238 28.717 44.238 T MSGASSSEQNNNSYETKTPNLRMSEKKCSWA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SGAS(0.001)S(0.005)S(0.047)EQNNNS(0.473)Y(0.001)ET(0.473)K S(-40.27)GAS(-26.18)S(-20.21)S(-10.06)EQNNNS(0)Y(-27.88)ET(0)K 15 3 -1.14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4334 157 16 16 3774 4015 4280 4755 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6300 4280 4755 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6300 4280 4755 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6300 O75113 242 O75113 O75113 NEDD4-binding protein 1 N4BP1 sp|O75113|N4BP1_HUMAN NEDD4-binding protein 1 OS=Homo sapiens GN=N4BP1 PE=1 SV=4 0.993337 21.7394 0.000518829 104.24 59.702 104.24 1 T RDETVLQEEARNKAGTPVSELTKQMDTVLSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX AGT(0.993)PVS(0.007)ELTK AGT(21.74)PVS(-21.74)ELT(-51.01)K 3 2 -1.0042 21989 0 0 22139 0 0 19213 0 0 21641 0 0 24261 0 0 20950 0 0 27694 0 0 24809 0 0 22280 0 0 14929 0 0 20796 0 0 20911 0 0 19574 0 0 22239 0 0 24366 0 0 21107 0 0 27877 0 0 25185 0 0 22213 0 0 14631 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25575000 25575000 0 0 NaN 4335 167 242 242 235 249 267 298 267 298 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14945 267 298 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14945 267 298 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14945 O75167 25 O75167 O75167 Phosphatase and actin regulator 2 PHACTR2 sp|O75167|PHAR2_HUMAN Phosphatase and actin regulator 2 OS=Homo sapiens GN=PHACTR2 PE=1 SV=2 0.994578 22.6351 2.17559E-07 151.16 124.35 151.16 1 T KASIANSDGPTAGSQTPPFKRKGKLSTIGKI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX ASIANSDGPTAGS(0.005)QT(0.995)PPFK AS(-126.81)IANS(-109.05)DGPT(-65.25)AGS(-22.64)QT(22.64)PPFK 15 3 0.69958 10748 0 0 7111.8 0 0 10393 0 0 8024.2 0 0 10649 0 0 11347 0 0 10702 0 0 11807 0 0 7473.5 0 0 24820 0 0 10169 0 0 6723.4 0 0 10489 0 0 8236.7 0 0 10789 0 0 11278 0 0 10803 0 0 12573 0 0 7511 0 0 23644 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19179000 19179000 0 0 NaN 4336 172 25 25 464 494 531 595 531 595 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15555 531 595 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15555 531 595 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15555 O75475 141 O75475 O75475 PC4 and SFRS1-interacting protein PSIP1 sp|O75475|PSIP1_HUMAN PC4 and SFRS1-interacting protein OS=Homo sapiens GN=PSIP1 PE=1 SV=1 0.886314 8.91883 0.000974267 120.65 82.567 120.65 1 T EKASNEDVTKAVDITTPKAARRGRKRKAEKQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPXXXXXXXXXXXXX AVDIT(0.114)T(0.886)PK AVDIT(-8.92)T(8.92)PK 6 2 -0.15605 36636 0 0 52761 0 0 32669 0 0 50384 0 0 72494 0 0 38133 0 0 70641 0 0 49872 0 0 53692 0 0 9347.5 0 0 34652 0 0 49828 0 0 33608 0 0 51681 0 0 71173 0 0 38934 0 0 71531 0 0 49852 0 0 53697 0 0 9956 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 74441000 74441000 0 0 NaN 4337 188 141 141 549 585 626 699 626 699 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13480 626 699 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13480 626 699 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13480 O75533 244 O75533 O75533 Splicing factor 3B subunit 1 SF3B1 sp|O75533|SF3B1_HUMAN Splicing factor 3B subunit 1 OS=Homo sapiens GN=SF3B1 PE=1 SV=3 0.999977 46.6423 9.03323E-16 218.6 182.08 218.6 1 T SLRWDETPGRAKGSETPGATPGSKIWDPTPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX GSET(1)PGATPGSK GS(-46.64)ET(46.64)PGAT(-58.83)PGS(-102.46)K 4 2 0.19493 23392 0 0 14542 0 0 23058 0 0 14288 0 0 16063 0 0 23272 0 0 16640 0 0 17313 0 0 13430 0 0 8645.7 0 0 22134 0 0 13736 0 0 23153 0 0 14830 0 0 16719 0 0 22867 0 0 16822 0 0 17857 0 0 13387 0 0 8541.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23080000 23080000 0 0 NaN 4338 190 244 244 1603 1689 1825 2028 1825 2028 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7716 1825 2028 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7716 1825 2028 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7716 O75533 261 O75533 O75533 Splicing factor 3B subunit 1 SF3B1 sp|O75533|SF3B1_HUMAN Splicing factor 3B subunit 1 OS=Homo sapiens GN=SF3B1 PE=1 SV=3 0.99923 31.807 1.27449E-05 134.47 103.35 134.47 1 T GATPGSKIWDPTPSHTPAGAATPGRGDTPGH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPXXXXXX IWDPTPS(0.001)HT(0.999)PAGAATPGR IWDPT(-48.95)PS(-31.81)HT(31.81)PAGAAT(-40.08)PGR 9 3 2.0295 11878 0 0 13872 0 0 12641 0 0 13527 0 0 11919 0 0 15181 0 0 11614 0 0 14180 0 0 13338 0 0 24536 0 0 11243 0 0 13103 0 0 12675 0 0 13937 0 0 12135 0 0 15177 0 0 11884 0 0 15002 0 0 13087 0 0 23432 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14597000 14597000 0 0 NaN 4339 190 261 261 1982 2096 2260 2523 2260 2523 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14803 2260 2523 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14803 2260 2523 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14803 O75533 211 O75533 O75533 Splicing factor 3B subunit 1 SF3B1 sp|O75533|SF3B1_HUMAN Splicing factor 3B subunit 1 OS=Homo sapiens GN=SF3B1 PE=1 SV=3 0.99967 34.8098 1.24331E-10 202.5 172.69 202.5 1 T RKRRWDQTADQTPGATPKKLSSWDQAETPGH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPXXXXXXXXXXXXX WDQTADQTPGAT(1)PK WDQT(-91.65)ADQT(-34.81)PGAT(34.81)PK 12 2 -1.6976 50410 0 0 40182 0 0 50964 0 0 42229 0 0 31331 0 0 52758 0 0 33760 0 0 44331 0 0 44630 0 0 22679 0 0 47702 0 0 37970 0 0 51050 0 0 43404 0 0 32998 0 0 52349 0 0 34545 0 0 45477 0 0 43576 0 0 22381 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 50085000 50085000 0 0 NaN 4340 190 211 211 3565;5334 3786;5682 4038;6060 4489;6734 6060 6734 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13638 6060 6734 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13638 6060 6734 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13638 O75533 350 O75533 O75533 Splicing factor 3B subunit 1 SF3B1 sp|O75533|SF3B1_HUMAN Splicing factor 3B subunit 1 OS=Homo sapiens GN=SF3B1 PE=1 SV=3 0.476458 0 0.0260951 56.327 31.008 56.327 T KSRWDETPASQMGGSTPVLTPGKTPIGTPAM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX WDETPAS(0.006)QMGGS(0.476)T(0.476)PVLT(0.04)PGK WDET(-33.43)PAS(-18.66)QMGGS(0)T(0)PVLT(-10.72)PGK 13 3 -0.45501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4341 190 350 350 5331 5679 6055 6729 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19092 6055 6729 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19092 6055 6729 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19092 O75534 443 O75534 O75534 Cold shock domain-containing protein E1 CSDE1 sp|O75534|CSDE1_HUMAN Cold shock domain-containing protein E1 OS=Homo sapiens GN=CSDE1 PE=1 SV=2 0.985131 18.71 0.0333889 64.711 38.7 64.711 1 T FLGTVEKEATFSNPKTTSPNKGKEKEAEDGI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX T(0.985)T(0.013)S(0.002)PNKGK T(18.71)T(-18.71)S(-27.86)PNKGK 1 3 0.29595 41531 0 0 48350 0 0 44935 0 0 45750 0 0 29985 0 0 40804 0 0 28838 0 0 41063 0 0 53487 0 0 1507.2 0 0 39312 0 0 45659 0 0 44867 0 0 47054 0 0 31319 0 0 41127 0 0 30085 0 0 41225 0 0 51730 0 0 2369.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 250460000 250460000 0 0 NaN 4342 191 443 443 4987 5316 5664 6293 5664 6293 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6890 5664 6293 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6890 5664 6293 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6890 O75592 1587 O75592 O75592 E3 ubiquitin-protein ligase MYCBP2 MYCBP2 sp|O75592|MYCB2_HUMAN E3 ubiquitin-protein ligase MYCBP2 OS=Homo sapiens GN=MYCBP2 PE=1 SV=3 0.669145 3.05883 0.000203122 110.48 92.979 110.48 1 T YDGEVLLRSIVKQVSTENDSTLVHRFPLLVA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX QVS(0.331)T(0.669)ENDSTLVHR QVS(-3.06)T(3.06)ENDS(-72.07)T(-79.48)LVHR 4 3 -0.98701 18188 0 0 12346 0 0 16906 0 0 12508 0 0 14405 0 0 17763 0 0 14284 0 0 14946 0 0 13080 0 0 3517.4 0 0 17206 0 0 11664 0 0 17066 0 0 12917 0 0 14763 0 0 17541 0 0 14513 0 0 15207 0 0 12957 0 0 3657.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9821700 9821700 0 0 NaN 4343 194 1587 1587 3170 3363 3595 3985 3595 3985 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8777 3595 3985 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8777 3595 3985 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8777 O75691 2064 O75691 O75691 Small subunit processome component 20 homolog UTP20 sp|O75691|UTP20_HUMAN Small subunit processome component 20 homolog OS=Homo sapiens GN=UTP20 PE=1 SV=3 0.999958 43.7908 0.0208547 65.149 37.486 65.149 1 T PDPRLPPQSCLLLPPTPVRGGQKAVVSRKTN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX LPPQSCLLLPPT(1)PVR LPPQS(-43.79)CLLLPPT(43.79)PVR 12 3 -0.085766 2337.5 0 0 2298.7 0 0 2474.7 0 0 2433.6 0 0 2680.1 0 0 2782.1 0 0 2150.4 0 0 2531.8 0 0 2466.8 0 0 10119 0 0 2212.4 0 0 2172.3 0 0 2485.5 0 0 2496.2 0 0 2700.4 0 0 2789 0 0 2223 0 0 2854.2 0 0 2420.6 0 0 9587.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 3593900 3593900 0 0 NaN 4344 200 2064 2064 2504 2644 2839 3167 2839 3167 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21680 2839 3167 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21680 2839 3167 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21680 O75691 1741 O75691 O75691 Small subunit processome component 20 homolog UTP20 sp|O75691|UTP20_HUMAN Small subunit processome component 20 homolog OS=Homo sapiens GN=UTP20 PE=1 SV=3 1 68.6471 1.65815E-11 178.05 160.35 178.05 1 T KEYTCKSLSDNGQPGTPDPADSGGTSAKESE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPPPXXX SLSDNGQPGT(1)PDPADSGGTSAK S(-74.02)LS(-68.65)DNGQPGT(68.65)PDPADS(-74.02)GGT(-90.52)S(-96.37)AK 10 3 -0.62521 20537 0 0 16360 0 0 20856 0 0 16188 0 0 14021 0 0 21171 0 0 12816 0 0 17892 0 0 17349 0 0 10358 0 0 19435 0 0 15453 0 0 20896 0 0 16712 0 0 14619 0 0 20977 0 0 13228 0 0 18386 0 0 16926 0 0 10167 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 78612000 78612000 0 0 NaN 4345 200 1741 1741 3978 4238 4522 5025 4522 5025 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10865 4522 5025 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10865 4522 5025 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10865 O75822 109 O75822 O75822 Eukaryotic translation initiation factor 3 subunit J EIF3J sp|O75822|EIF3J_HUMAN Eukaryotic translation initiation factor 3 subunit J OS=Homo sapiens GN=EIF3J PE=1 SV=2 1 105.987 0.000383956 105.99 63.198 105.99 1 T EIKKRLEEPEEPKVLTPEEQLADKLRLKKLQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX VLT(1)PEEQLADKLR VLT(105.99)PEEQLADKLR 3 3 1.2469 5360.2 0 0 8736.6 0 0 5103.7 0 0 8815.5 0 0 5289.4 0 0 6034.6 0 0 7169.6 0 0 6764.6 0 0 9020 0 0 7466.5 0 0 5071.2 0 0 8253.6 0 0 5159.7 0 0 9002 0 0 5385 0 0 6196.1 0 0 7258.4 0 0 6982 0 0 8821.6 0 0 7187.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8489200 8489200 0 0 NaN 4346 204 109 109 5183 5522 5884 6540 5884 6540 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20030 5884 6540 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20030 5884 6540 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20030 O76021 465 O76021 O76021 Ribosomal L1 domain-containing protein 1 RSL1D1 sp|O76021|RL1D1_HUMAN Ribosomal L1 domain-containing protein 1 OS=Homo sapiens GN=RSL1D1 PE=1 SV=3 0.86 7.89087 0.0137163 80.438 51.351 80.438 1 T DARQTPKKPEAKFFTTPSKSVRKASHTPKKW X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX FFT(0.14)T(0.86)PSK FFT(-7.89)T(7.89)PS(-35.72)K 4 3 -0.073629 10432 0 0 8571.2 0 0 9935.8 0 0 10804 0 0 2837.1 0 0 10661 0 0 2491.6 0 0 6669.6 0 0 10879 0 0 1311.5 0 0 9869.4 0 0 8109.6 0 0 9945.7 0 0 10954 0 0 3301.2 0 0 10645 0 0 2782.5 0 0 6884.3 0 0 10378 0 0 1389.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14779000 14779000 0 0 NaN 4347 210 465 465 1261 1326 1428 1584 1428 1584 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18079 1428 1584 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18079 1428 1584 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18079 O76021 340 O76021 O76021 Ribosomal L1 domain-containing protein 1 RSL1D1 sp|O76021|RL1D1_HUMAN Ribosomal L1 domain-containing protein 1 OS=Homo sapiens GN=RSL1D1 PE=1 SV=3 1 67.9636 0.0356333 67.964 54.536 67.964 1 T SGDTTVKKPESKKEQTPEHGKKKRGRGKAQV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX KEQT(1)PEHGK KEQT(67.96)PEHGK 4 3 -1.3272 8893.2 0 0 13588 0 0 7958.3 0 0 13891 0 0 7448 0 0 9719 0 0 7423 0 0 9112.4 0 0 13765 0 0 3714.6 0 0 8411.7 0 0 12838 0 0 8061 0 0 14177 0 0 7594 0 0 9927.5 0 0 7730.8 0 0 9275.8 0 0 13313 0 0 3708.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13283000 13283000 0 0 NaN 4348 210 340 340 2044 2163 2330 2597 2330 2597 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5997 2330 2597 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5997 2330 2597 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5997 O94804 952 O94804 O94804 Serine/threonine-protein kinase 10 STK10 sp|O94804|STK10_HUMAN Serine/threonine-protein kinase 10 OS=Homo sapiens GN=STK10 PE=1 SV=1 0.820521 6.60926 6.7644E-07 156.13 136.74 156.13 1 T MFFKLSEEAECPNPSTPSKAAKFFPYSSADA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPXXXXXXXXXXXX LSEEAECPNPS(0.179)T(0.821)PSK LS(-132.76)EEAECPNPS(-6.61)T(6.61)PS(-33.69)K 12 3 -0.51739 23646 0 0 8923.3 0 0 28760 0 0 9653.4 0 0 20460 0 0 26995 0 0 19702 0 0 20189 0 0 10315 0 0 6859.2 0 0 22395 0 0 8433.7 0 0 28563 0 0 10146 0 0 21234 0 0 26212 0 0 19834 0 0 20721 0 0 10576 0 0 6926 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 34519000 34519000 0 0 NaN 4349 218 952 952 2551 2695 2893 3226 2893 3226 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11940 2893 3226 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11940 2893 3226 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11940 O94851 451 O94851 O94851 Protein-methionine sulfoxide oxidase MICAL2 MICAL2 sp|O94851|MICA2_HUMAN Protein-methionine sulfoxide oxidase MICAL2 OS=Homo sapiens GN=MICAL2 PE=1 SV=1 1 42.0954 0.0484239 42.095 14.432 42.095 2 T ELLAERESLYRLLPQTTPENINKNFEQYTLD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX LLPQT(1)T(1)PENINK LLPQT(42.1)T(42.1)PENINK 5 3 2.263 0 11474 0 0 8119 0 0 12122 0 0 6754.3 0 0 5794.1 0 0 11787 0 0 6999.3 0 0 9311.5 0 0 7762.1 0 0 6114.3 0 0 10859 0 0 7662 0 0 12094 0 0 7099.3 0 0 6271.3 0 0 11571 0 0 7087.7 0 0 9620.3 0 0 7626.5 0 0 5972.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 13154000 0 13154000 0 NaN 4350 222 451 451 2449 2587 2781 3108 2781 3108 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18307 2781 3108 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18307 2781 3108 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18307 O94851 452 O94851 O94851 Protein-methionine sulfoxide oxidase MICAL2 MICAL2 sp|O94851|MICA2_HUMAN Protein-methionine sulfoxide oxidase MICAL2 OS=Homo sapiens GN=MICAL2 PE=1 SV=1 1 42.0954 0.0484239 42.095 14.432 42.095 2 T LLAERESLYRLLPQTTPENINKNFEQYTLDP X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX LLPQT(1)T(1)PENINK LLPQT(42.1)T(42.1)PENINK 6 3 2.263 0 11474 0 0 8119 0 0 12122 0 0 6754.3 0 0 5794.1 0 0 11787 0 0 6999.3 0 0 9311.5 0 0 7762.1 0 0 6114.3 0 0 10859 0 0 7662 0 0 12094 0 0 7099.3 0 0 6271.3 0 0 11571 0 0 7087.7 0 0 9620.3 0 0 7626.5 0 0 5972.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 13154000 0 13154000 0 NaN 4351 222 452 452 2449 2587 2781 3108 2781 3108 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18307 2781 3108 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18307 2781 3108 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18307 O94885 405 O94885 O94885 SAM and SH3 domain-containing protein 1 SASH1 sp|O94885|SASH1_HUMAN SAM and SH3 domain-containing protein 1 OS=Homo sapiens GN=SASH1 PE=1 SV=3 0.5 0 7.24368E-11 197.13 177.39 197.13 1 T EGEMKKGLGSLSHGRTCSFGGFDLTNRSLHV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX T(0.5)CS(0.5)FGGFDLTNR T(0)CS(0)FGGFDLT(-77.1)NR 1 2 -0.34578 23232 0 0 6182.8 0 0 27426 0 0 6616.4 0 0 5121.4 0 0 26433 0 0 5070.6 0 0 12188 0 0 7157.7 0 0 22210 0 0 21999 0 0 5843.2 0 0 27103 0 0 7085.5 0 0 6515.4 0 0 25474 0 0 5221 0 0 13447 0 0 6974 0 0 21196 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19866000 19866000 0 0 NaN 4352 224 405 405 4651 4962 5286 5874 5286 5874 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18698 5286 5874 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18698 5286 5874 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18698 O94913 1530 O94913 O94913 Pre-mRNA cleavage complex 2 protein Pcf11 PCF11 sp|O94913|PCF11_HUMAN Pre-mRNA cleavage complex 2 protein Pcf11 OS=Homo sapiens GN=PCF11 PE=1 SV=3 0.999406 32.263 0.000146202 121.19 109.4 121.19 1 T QEPCDSPKVKEERIDTPPACTEESIATPSEI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP IDT(0.999)PPACT(0.001)EESIATPSEIKTENDTVESV IDT(32.26)PPACT(-32.26)EES(-76.17)IAT(-105.42)PS(-109.31)EIKT(-112.87)ENDT(-115.53)VES(-115.41)V 3 3 1.7343 1243.2 0 0 1535.5 0 0 1520.4 0 0 1539.6 0 0 1202.4 0 0 1433.4 0 0 1404.2 0 0 2864.9 0 0 1226.1 0 0 29937 0 0 1177.4 0 0 1450.6 0 0 1511.5 0 0 1578.8 0 0 1241.7 0 0 1515.9 0 0 1414.7 0 0 3720.3 0 0 1217.3 0 0 28256 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7464700 7464700 0 0 NaN 4353 227 1530 1530 1803 1903 2050 2286 2050 2286 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19396 2050 2286 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19396 2050 2286 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19396 O94913 187 O94913 O94913 Pre-mRNA cleavage complex 2 protein Pcf11 PCF11 sp|O94913|PCF11_HUMAN Pre-mRNA cleavage complex 2 protein Pcf11 OS=Homo sapiens GN=PCF11 PE=1 SV=3 0.228138 0.668647 0.0161463 76.198 60.256 76.198 T EPSTPGTVVSSPSISTPPIVPDIQKNLTQEQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPXXXXXX SPEEPSTPGT(0.002)VVS(0.196)S(0.196)PS(0.196)IS(0.182)T(0.228)PPIVPDIQK S(-38.92)PEEPS(-27.81)T(-27.4)PGT(-20.83)VVS(-0.67)S(-0.67)PS(-0.67)IS(-0.97)T(0.67)PPIVPDIQK 19 4 -0.20318 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4354 227 187 187 4089 4360 4650 5163 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21085 4650 5163 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21085 4650 5163 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21085 O94915 1915 O94915 O94915 Protein furry homolog-like FRYL sp|O94915|FRYL_HUMAN Protein furry homolog-like OS=Homo sapiens GN=FRYL PE=1 SV=2 0.569765 1.22031 2.5389E-18 246.53 203.05 246.53 1 T HDPIMGNKYAANRKSTGQLNLSTSPINSSSY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP S(0.43)T(0.57)GQLNLSTSPINSSSYLGYNSNAR S(-1.22)T(1.22)GQLNLS(-41.4)T(-80.55)S(-101.85)PINS(-165.3)S(-181.11)S(-190.89)Y(-216.57)LGY(-229.82)NS(-223.22)NAR 2 3 0.24168 3551.5 0 0 2622.3 0 0 4039.4 0 0 2225.1 0 0 2987.9 0 0 4184.2 0 0 3193.4 0 0 4010.2 0 0 2991.6 0 0 20486 0 0 3362.5 0 0 2474.9 0 0 4026.9 0 0 2340.4 0 0 3096.9 0 0 4143 0 0 3235.2 0 0 4646.6 0 0 2960.4 0 0 19383 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 60131000 60131000 0 0 NaN 4355 228 1915 1915 4508 4801 5113 5678 5113 5678 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19149 5113 5678 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19149 5113 5678 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19149 O95104 236 O95104 O95104 Splicing factor, arginine/serine-rich 15 SCAF4 sp|O95104|SFR15_HUMAN Splicing factor, arginine/serine-rich 15 OS=Homo sapiens GN=SCAF4 PE=1 SV=3 0.499619 0 0.000144013 126.21 79.737 126.21 T NAVMAQVQAITAQLKTTPTQPSEQKAAFPPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPXXXXXX T(0.5)T(0.5)PT(0.001)QPSEQK T(0)T(0)PT(-28.17)QPS(-91.74)EQK 1 3 1.5484 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4356 232 236 236 4982 5311 5658 6287 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7482 5658 6287 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7482 5658 6287 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7482 O95104 237 O95104 O95104 Splicing factor, arginine/serine-rich 15 SCAF4 sp|O95104|SFR15_HUMAN Splicing factor, arginine/serine-rich 15 OS=Homo sapiens GN=SCAF4 PE=1 SV=3 0.499619 0 0.000144013 126.21 79.737 126.21 T AVMAQVQAITAQLKTTPTQPSEQKAAFPPPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T(0.5)T(0.5)PT(0.001)QPSEQK T(0)T(0)PT(-28.17)QPS(-91.74)EQK 2 3 1.5484 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4357 232 237 237 4982 5311 5658 6287 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7482 5658 6287 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7482 5658 6287 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7482 O95239 799 O95239 O95239 Chromosome-associated kinesin KIF4A KIF4A sp|O95239|KIF4A_HUMAN Chromosome-associated kinesin KIF4A OS=Homo sapiens GN=KIF4A PE=1 SV=3 0.943443 12.2277 0.00161463 108.26 75.512 108.26 1 T KKESGENPPPKLRRRTFSLTEVRGQVSESED X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX T(0.943)FS(0.056)LTEVR T(12.23)FS(-12.23)LT(-41.3)EVR 1 2 -0.18341 9004.7 0 0 9114.4 0 0 8618 0 0 8014.4 0 0 9925.2 0 0 9766.4 0 0 9406.4 0 0 9274.5 0 0 9045.2 0 0 8030.8 0 0 8519.3 0 0 8603.8 0 0 8715.1 0 0 8324.2 0 0 9987.3 0 0 9720.1 0 0 9589.9 0 0 9564 0 0 8940.2 0 0 7776.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 75823000 75823000 0 0 NaN 4358 237 799 799 4712 5023 5350 5945 5350 5945 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17430 5350 5945 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17430 5350 5945 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17430 O95251 88 O95251 O95251 Histone acetyltransferase KAT7 KAT7 sp|O95251|KAT7_HUMAN Histone acetyltransferase KAT7 OS=Homo sapiens GN=KAT7 PE=1 SV=1 0.999989 49.4539 3.04012E-10 199.41 172.32 199.41 1 T STRRVTRSQQQPTPVTPKKYPLRQTRSSGSE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX SQQQPTPVT(1)PK S(-124.43)QQQPT(-49.45)PVT(49.45)PK 9 2 -0.24565 32961 0 0 24963 0 0 33773 0 0 22639 0 0 18906 0 0 33474 0 0 22054 0 0 27207 0 0 26749 0 0 2515.8 0 0 31193 0 0 23568 0 0 33785 0 0 23561 0 0 20113 0 0 32995 0 0 22426 0 0 27609 0 0 26194 0 0 2998.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 45518000 45518000 0 0 NaN 4359 239 88 88 4234 4512 4808 5336 4808 5336 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8827 4808 5336 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8827 4808 5336 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8827 O95544 62 O95544 O95544 NAD kinase NADK sp|O95544|NADK_HUMAN NAD kinase OS=Homo sapiens GN=NADK PE=1 SV=1 0.602816 1.81239 6.00248E-05 120.32 93.295 120.32 1 T LSASPALGSTKEFRRTRSLHGPCPVTTFGPK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP T(0.603)RS(0.397)LHGPCPVTTFGPK T(1.81)RS(-1.81)LHGPCPVT(-41.62)T(-64.74)FGPK 1 4 -1.1995 12207 0 0 9503.6 0 0 12045 0 0 9297.3 0 0 8535.9 0 0 11456 0 0 9318.8 0 0 10733 0 0 9250 0 0 2263.1 0 0 11550 0 0 8976.5 0 0 12096 0 0 9593.5 0 0 8880.5 0 0 11382 0 0 9446.2 0 0 10862 0 0 9129.9 0 0 2379.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29766000 29766000 0 0 NaN 4360 251 62 62 4899 5224 5565 6186 5565 6186 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13890 5565 6186 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13890 5565 6186 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13890 O95835 616 O95835 O95835 Serine/threonine-protein kinase LATS1 LATS1 sp|O95835|LATS1_HUMAN Serine/threonine-protein kinase LATS1 OS=Homo sapiens GN=LATS1 PE=1 SV=1 0.403514 2.16897 0.0295792 62.104 34.618 62.104 T DSGDKEKKQITTSPITVRKNKKDEERRESRI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX QIT(0.107)T(0.245)S(0.245)PIT(0.404)VR QIT(-5.78)T(-2.17)S(-2.17)PIT(2.17)VR 8 2 -0.10912 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4361 268 616 616 2179;3053 2302;3239 3465 3839 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14046 3465 3839 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14046 3465 3839 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14046 P00352 6 P00352 P00352 Retinal dehydrogenase 1 ALDH1A1 sp|P00352|AL1A1_HUMAN Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1 PE=1 SV=2 0.291401 0.91212 0.00957283 74.76 49.374 74.76 T __________MSSSGTPDLPVLLTDLKIQYT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPXXXX S(0.236)S(0.236)S(0.236)GT(0.291)PDLPVLLTDLK S(-0.91)S(-0.91)S(-0.91)GT(0.91)PDLPVLLT(-57.54)DLK 5 2 0.090397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4362 278 6 6 4423 4713 5017 5565 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24426 5017 5565 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24426 5017 5565 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24426 Q99878;Q96KK5;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908 121;121;121;121;121;121;121;121 Q99878 Q99878 Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E HIST1H2AJ;HIST1H2AH;HIST1H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB sp|Q99878|H2A1J_HUMAN Histone H2A type 1-J OS=Homo sapiens GN=HIST1H2AJ PE=1 SV=3;sp|Q96KK5|H2A1H_HUMAN Histone H2A type 1-H OS=Homo sapiens GN=HIST1H2AH PE=1 SV=3;sp|Q93077|H2A1C_HUMAN Histone H2A type 1-C OS=Homo sapiens GN=HIST1H2AC PE=1 SV=3;sp|Q7L7L0| 0.5 0 0.0260108 47.261 20.663 47.261 1 T GGVLPNIQAVLLPKKTESHHKTK________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPXXXXXXXXXX KT(0.5)ES(0.5)HHK KT(0)ES(0)HHK 2 4 0.88906 12487 0 0 9448.8 0 0 11864 0 0 10499 0 0 8079.5 0 0 11700 0 0 7442.2 0 0 10656 0 0 10469 0 0 4834.1 0 0 11814 0 0 8931.9 0 0 11935 0 0 10735 0 0 8416.4 0 0 11670 0 0 7689 0 0 10874 0 0 10201 0 0 4798.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6518000 6518000 0 0 NaN 4363 296 121 121 2245 2373 2554 2851 2554 2851 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5225 2554 2851 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5225 2554 2851 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5225 P05771 642 P05771 P05771 Protein kinase C beta type PRKCB sp|P05771|KPCB_HUMAN Protein kinase C beta type OS=Homo sapiens GN=PRKCB PE=1 SV=4 0.987751 19.0655 0.0109224 79.466 62.722 79.466 1 T TSNFDKEFTRQPVELTPTDKLFIMNLDQNEF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX QPVELT(0.988)PT(0.012)DK QPVELT(19.07)PT(-19.07)DK 6 3 0.019229 4940.2 0 0 10921 0 0 6490.2 0 0 11646 0 0 4643.1 0 0 5828.1 0 0 5515.5 0 0 6711.5 0 0 11042 0 0 2433.3 0 0 4680.5 0 0 10321 0 0 6425.2 0 0 11820 0 0 4838.5 0 0 6117.1 0 0 5723.8 0 0 6771.2 0 0 10661 0 0 2446.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16480000 16480000 0 0 NaN 4364 306 642 642 3108 3296 3526 3909 3526 3909 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13571 3526 3909 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13571 3526 3909 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13571 P05783 52 P05783 P05783 Keratin, type I cytoskeletal 18 KRT18 sp|P05783|K1C18_HUMAN Keratin, type I cytoskeletal 18 OS=Homo sapiens GN=KRT18 PE=1 SV=2 0.315985 0 1.36169E-34 294.98 270.52 294.98 T AGAGGSGSRISVSRSTSFRGGMGSGGLATGI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.316)T(0.316)S(0.316)FRGGMGS(0.052)GGLATGIAGGLAGMGGIQNEK S(0)T(0)S(0)FRGGMGS(-7.83)GGLAT(-48.38)GIAGGLAGMGGIQNEK 2 4 -1.1226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4365 307 52 52 4518 4815;4816;4817 5132 5700 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21711 5132 5700 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21711 5132 5700 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21711 P05783 65 P05783 P05783 Keratin, type I cytoskeletal 18 KRT18 sp|P05783|K1C18_HUMAN Keratin, type I cytoskeletal 18 OS=Homo sapiens GN=KRT18 PE=1 SV=2 0.238443 0.871074 0.0405229 66.201 50.802 66.201 T RSTSFRGGMGSGGLATGIAGGLAGMGGIQNE X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP S(0.193)T(0.193)S(0.195)FRGGMGS(0.18)GGLAT(0.238)GIAGGLAGMGGIQNEK S(-0.92)T(-0.92)S(-0.87)FRGGMGS(-1.22)GGLAT(0.87)GIAGGLAGMGGIQNEK 15 3 1.9644 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4366 307 65 65 4518 4815;4816;4817 5131 5699 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21793 5131 5699 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21793 5131 5699 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21793 P06213 1052 P06213 P06213 Insulin receptor;Insulin receptor subunit alpha;Insulin receptor subunit beta INSR sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4 1 41.1889 0.0507195 41.189 10.531 41.189 1 T VYEGNARDIIKGEAETRVAVKTVNESASLRE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX GEAET(1)RVAVK GEAET(41.19)RVAVK 5 2 0.75886 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4367 309 1052 1052 1401 1477 1586 1752 1586 1752 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21895 1586 1752 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21895 1586 1752 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21895 P06400 821 P06400 P06400 Retinoblastoma-associated protein RB1 sp|P06400|RB_HUMAN Retinoblastoma-associated protein OS=Homo sapiens GN=RB1 PE=1 SV=2 0.942794 12.3302 5.69968E-05 129.02 106.78 129.02 1;2 T ISPLKSPYKISEGLPTPTKMTPRSRILVSIG X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPXXXXXXXX IS(0.002)EGLPT(0.943)PT(0.055)KMT(1)PR IS(-26.57)EGLPT(12.33)PT(-12.33)KMT(58.19)PR 7 3 0.397 20088 56262 0 12958 22446 0 19565 61507 0 12925 20549 0 6937.9 7664.7 0 16050 51948 0 7144.2 7779.8 0 15417 27559 0 10890 21836 0 1097.1 9348.8 0 19007 53258 0 12240 21193 0 19576 60973 0 13323 21720 0 7792.6 10972 0 15943 50381 0 7364.8 8298.5 0 15522 28870 0 10586 20949 0 1389.8 9440.9 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 183080000 47207000 135870000 0 NaN 4368 310 821 821 1938;1939 2046;2047;2048;2049 2208;2211 2468;2472 2211 2472 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16337 2211 2472 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16337 2211 2472 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16337 P06400 826 P06400 P06400 Retinoblastoma-associated protein RB1 sp|P06400|RB_HUMAN Retinoblastoma-associated protein OS=Homo sapiens GN=RB1 PE=1 SV=2 0.999999 58.1868 1.45986E-06 152.01 119.86 129.02 1;2 T SPYKISEGLPTPTKMTPRSRILVSIGESFGT X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Oxidation (M);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPXXXXXXXXXXXXX IS(0.002)EGLPT(0.943)PT(0.055)KMT(1)PR IS(-26.57)EGLPT(12.33)PT(-12.33)KMT(58.19)PR 12 3 0.397 91233 56262 0 31298 22446 0 87705 61507 0 34221 20549 0 34700 7664.7 0 89687 51948 0 34271 7779.8 0 53010 27559 0 37540 21836 0 18789 9348.8 0 86317 53258 0 29583 21193 0 87867 60973 0 35850 21720 0 38340 10972 0 86998 50381 0 34995 8298.5 0 55161 28870 0 36902 20949 0 18919 9440.9 0 3 1 0 3 1 0 3 1 0 3 1 0 3 1 0 3 1 0 3 1 0 3 1 0 3 1 0 3 1 0 443800000 307930000 135870000 0 NaN 4369 310 826 826 1939 2047;2048;2049 2209;2210;2211 2469;2470;2471;2472 2211 2472 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16337 2210 2471 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15896 2210 2471 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15896 P06400 373 P06400 P06400 Retinoblastoma-associated protein RB1 sp|P06400|RB_HUMAN Retinoblastoma-associated protein OS=Homo sapiens GN=RB1 PE=1 SV=2 1 94.4236 2.41102E-05 121.5 86.115 121.5 1 T RKSNLDEEVNVIPPHTPVRTVMNTIQQLMMI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX KSNLDEEVNVIPPHT(1)PVR KS(-94.42)NLDEEVNVIPPHT(94.42)PVR 15 4 0.19314 81724 0 0 55634 0 0 80365 0 0 62704 0 0 49163 0 0 82266 0 0 51756 0 0 65449 0 0 59764 0 0 38092 0 0 77326 0 0 52596 0 0 80624 0 0 64265 0 0 51778 0 0 81447 0 0 52778 0 0 67450 0 0 58629 0 0 37383 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 264430000 264430000 0 0 NaN 4370 310 373 373 2216;4044 2342;4313 2523;4602 2816;2817;2818;5111;5112 2523 2816 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14291 2523 2816 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14291 2523 2816 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14291 P06400 356 P06400 P06400 Retinoblastoma-associated protein RB1 sp|P06400|RB_HUMAN Retinoblastoma-associated protein OS=Homo sapiens GN=RB1 PE=1 SV=2 0.999998 57.2474 9.45219E-23 277.79 249.38 277.79 1 T KTLQTDSIDSFETQRTPRKSNLDEEVNVIPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX TLQTDSIDSFETQRT(1)PR T(-225.14)LQT(-204.99)DS(-183.34)IDS(-125.25)FET(-57.25)QRT(57.25)PR 15 3 -0.52335 26700 0 0 12370 0 0 28494 0 0 10556 0 0 10594 0 0 26152 0 0 10161 0 0 16378 0 0 11041 0 0 10373 0 0 25272 0 0 11675 0 0 28369 0 0 11200 0 0 11803 0 0 25414 0 0 10388 0 0 17119 0 0 10857 0 0 10147 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 773370000 773370000 0 0 NaN 4371 310 356 356 4786 5104 5438 6049 5438 6049 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14947 5438 6049 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14947 5438 6049 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14947 P06454 107 P06454 P06454 Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 PTMA sp|P06454|PTMA_HUMAN Prothymosin alpha OS=Homo sapiens GN=PTMA PE=1 SV=2 1 68.0687 0.0111332 68.069 50.205 68.069 1 T AEDDEDDDVDTKKQKTDEDD___________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX KQKT(1)DEDD KQKT(68.07)DEDD 4 2 0.20076 15407 0 0 10191 0 0 14631 0 0 8743.4 0 0 19890 0 0 16276 0 0 19448 0 0 15510 0 0 8973.4 0 0 1664.6 0 0 14576 0 0 9618.7 0 0 14841 0 0 9186.9 0 0 19858 0 0 15971 0 0 19531 0 0 15638 0 0 9298.3 0 0 1926.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15566000 15566000 0 0 2.0241 4372 311 107 107 2181 2305 2481 2761 2481 2761 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6524 2481 2761 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6524 2481 2761 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6524 P06493 161 P06493 P06493 Cyclin-dependent kinase 1 CDK1 sp|P06493|CDK1_HUMAN Cyclin-dependent kinase 1 OS=Homo sapiens GN=CDK1 PE=1 SV=3 0.999999 61.3458 5.5896E-07 143.05 114.76 143.05 1 T DFGLARAFGIPIRVYTHEVVTLWYRSPEVLL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX VYT(1)HEVVTLWYR VY(-61.35)T(61.35)HEVVT(-81.4)LWY(-125.84)R 3 3 0.34605 3656.5 0 0 5777 0 0 3360.7 0 0 4781.1 0 0 3266.4 0 0 4727.6 0 0 3658.8 0 0 4685.5 0 0 5318 0 0 6446.8 0 0 3458.8 0 0 5451.6 0 0 3400.7 0 0 4969 0 0 3327.4 0 0 4752.7 0 0 3750.9 0 0 4895.8 0 0 5176.9 0 0 6178.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 31215000 31215000 0 0 NaN 4373 312 161 161 5328 5676 6052 6726 6052 6726 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20517 6052 6726 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20517 6052 6726 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20517 P06733 26 P06733 P06733 Alpha-enolase ENO1 sp|P06733|ENOA_HUMAN Alpha-enolase OS=Homo sapiens GN=ENO1 PE=1 SV=2 0.903751 9.72655 1.3362E-10 191.44 43.748 191.44 1 T IFDSRGNPTVEVDLFTSKGLFRAAVPSGAST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPXXXXXXXXXXXXX GNPTVEVDLFT(0.904)S(0.096)K GNPT(-166.28)VEVDLFT(9.73)S(-9.73)K 11 3 -0.49743 4601.6 0 0 5400.6 0 0 4356.1 0 0 5387.4 0 0 4712.3 0 0 5219.3 0 0 4610.5 0 0 4722.9 0 0 5373.4 0 0 8404.9 0 0 4353.4 0 0 5101.7 0 0 4404.6 0 0 5529.7 0 0 4760.3 0 0 5248.7 0 0 4718.8 0 0 5009.9 0 0 5269.5 0 0 8023.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5518300 5518300 0 0 NaN 4374 314 26 26 1531 1612 1741 1934 1741 1934 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20557 1741 1934 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20557 1741 1934 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20557 P06748 219 P06748 P06748 Nucleophosmin NPM1 sp|P06748|NPM_HUMAN Nucleophosmin OS=Homo sapiens GN=NPM1 PE=1 SV=2 0.983892 19.3399 0.0120294 86.996 47.73 86.996 1 T AQKSNQNGKDSKPSSTPRSKGQESFKKQEKT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY) XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX DSKPS(0.005)S(0.011)T(0.984)PR DS(-42.38)KPS(-23.3)S(-19.34)T(19.34)PR 7 3 0.18985 23526 0 0 21900 0 0 22282 0 0 22104 0 0 8252.1 0 0 20869 0 0 9864.3 0 0 17710 0 0 21114 0 0 2602.8 0 0 22257 0 0 20690 0 0 22340 0 0 22663 0 0 9236.1 0 0 20939 0 0 10272 0 0 17965 0 0 20356 0 0 2860.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 202940000 202940000 0 0 NaN 4375 315 219 219 810 858 914 1007 914 1007 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5918 914 1007 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5918 914 1007 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5918 P06748 234 P06748 P06748 Nucleophosmin NPM1 sp|P06748|NPM_HUMAN Nucleophosmin OS=Homo sapiens GN=NPM1 PE=1 SV=2 1 60.1571 0.0141374 60.157 28.56 60.157 1;2 T TPRSKGQESFKKQEKTPKTPKGPSSVEDIKA Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX QEKT(1)PKT(1)PK QEKT(60.16)PKT(60.16)PK 4 4 -0.3249 16309 16937 0 20510 23796 0 17474 16049 0 20211 23766 0 9196.7 9263.3 0 18966 16488 0 9758.6 11956 0 15842 16251 0 24393 26296 0 4526.3 2024.8 0 15437 16023 0 19374 22479 0 17428 16133 0 20751 24288 0 9843.3 9852.7 0 19035 16853 0 10307 12433 0 16148 16371 0 23448 25338 0 4628.6 2282.7 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 33300000 13337000 19963000 0 NaN 4376 315 234 234 2176;3013 2299;3194 2475;3417 2755;3789 3417 3789 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7883 3417 3789 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7883 3417 3789 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7883 P06748 237 P06748 P06748 Nucleophosmin NPM1 sp|P06748|NPM_HUMAN Nucleophosmin OS=Homo sapiens GN=NPM1 PE=1 SV=2 1 60.1571 0.0141374 60.157 28.56 60.157 2 T SKGQESFKKQEKTPKTPKGPSSVEDIKAKMQ X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX QEKT(1)PKT(1)PK QEKT(60.16)PKT(60.16)PK 7 4 -0.3249 0 16937 0 0 23796 0 0 16049 0 0 23766 0 0 9263.3 0 0 16488 0 0 11956 0 0 16251 0 0 26296 0 0 2024.8 0 0 16023 0 0 22479 0 0 16133 0 0 24288 0 0 9852.7 0 0 16853 0 0 12433 0 0 16371 0 0 25338 0 0 2282.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 19963000 0 19963000 0 NaN 4377 315 237 237 3013 3194 3417 3789 3417 3789 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7883 3417 3789 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7883 3417 3789 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7883 P06748 199 P06748 P06748 Nucleophosmin NPM1 sp|P06748|NPM_HUMAN Nucleophosmin OS=Homo sapiens GN=NPM1 PE=1 SV=2 0.993437 21.8006 0.0258306 73.655 28.518 73.655 1 T EEAEEKAPVKKSIRDTPAKNAQKSNQNGKDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX S(0.007)IRDT(0.993)PAK S(-21.8)IRDT(21.8)PAK 5 3 0.12207 251230 0 0 128980 0 0 270540 0 0 145170 0 0 67099 0 0 250080 0 0 82128 0 0 154110 0 0 150310 0 0 0 0 0 237800 0 0 121940 0 0 268850 0 0 149760 0 0 80381 0 0 244780 0 0 84744 0 0 158300 0 0 145410 0 0 3511.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 322500000 322500000 0 0 NaN 4378 315 199 199 3859 4112 4388 4879 4388 4879 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7967 4388 4879 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7967 4388 4879 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7967 P07332 421 P07332 P07332 Tyrosine-protein kinase Fes/Fps FES sp|P07332|FES_HUMAN Tyrosine-protein kinase Fes/Fps OS=Homo sapiens GN=FES PE=1 SV=3 0.995285 23.2442 0.00855281 91.657 20.416 91.657 1 T RHSTSSSEQEREGGRTPTLEILKSHISGIFR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX EGGRT(0.995)PT(0.005)LEILK EGGRT(23.24)PT(-23.24)LEILK 5 3 -0.031638 8882.9 0 0 3935.9 0 0 10124 0 0 3408.9 0 0 7801.1 0 0 9619.7 0 0 10062 0 0 7892.8 0 0 3575.5 0 0 4096.9 0 0 8410.1 0 0 3715.1 0 0 10098 0 0 3632.1 0 0 8079.6 0 0 9351.2 0 0 9956.1 0 0 8107.5 0 0 3803 0 0 4040.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21131000 21131000 0 0 NaN 4379 317 421 421 961 1015 1100 1215 1100 1215 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17402 1100 1215 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17402 1100 1215 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17402 P08047;Q13118;O14901;Q02447;Q9Y2Y9 679;422;447;674;220 P08047;Q9Y2Y9 P08047 Transcription factor Sp1;Krueppel-like factor 10;Krueppel-like factor 11;Transcription factor Sp3;Krueppel-like factor 13 SP1;KLF10;KLF11;SP3;KLF13 sp|P08047|SP1_HUMAN Transcription factor Sp1 OS=Homo sapiens GN=SP1 PE=1 SV=3;sp|Q13118|KLF10_HUMAN Krueppel-like factor 10 OS=Homo sapiens GN=KLF10 PE=1 SV=1;sp|O14901|KLF11_HUMAN Krueppel-like factor 11 OS=Homo sapiens GN=KLF11 PE=1 SV=2;sp|Q02447|SP3_HU 0.690048 3.47584 0.0464924 66.692 33.429 66.692 1 T GKRFTRSDELQRHKRTHTGEKKFACPECPKR;NKKFARSDELARHYRTHTGEKKFSCPICEKR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX T(0.69)HT(0.31)GEKK T(3.48)HT(-3.48)GEKK 1 3 0.61177 5215.8 0 0 10404 0 0 5904.4 0 0 10636 0 0 5491.5 0 0 4100.5 0 0 4866.2 0 0 7992.2 0 0 12576 0 0 2448.1 0 0 4938.1 0 0 9829.4 0 0 5899.6 0 0 10801 0 0 5595.7 0 0 4455.2 0 0 5194.5 0 0 7939.7 0 0 12082 0 0 2490.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8284900 8284900 0 0 NaN 4380 327;2261 679;220 679 4741 5056 5388 5991 5388 5991 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5602 5388 5991 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5602 5388 5991 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5602 P09874 368 P09874 P09874 Poly [ADP-ribose] polymerase 1 PARP1 sp|P09874|PARP1_HUMAN Poly [ADP-ribose] polymerase 1 OS=Homo sapiens GN=PARP1 PE=1 SV=4 0.999987 49.3154 8.29909E-46 328.64 314.73 328.64 1 T QDRIFPPETSASVAATPPPSTASAPAAVNSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPPPPPPPP IFPPETSASVAAT(1)PPPSTASAPAAVNSSASADKPLSNMK IFPPET(-67.9)S(-58.17)AS(-49.32)VAAT(49.32)PPPS(-73.64)T(-96.4)AS(-132.21)APAAVNS(-220.93)S(-227.39)AS(-237.87)ADKPLS(-261.79)NMK 13 5 -0.39351 25946 0 0 36315 0 0 29803 0 0 39428 0 0 38161 0 0 29901 0 0 42460 0 0 45013 0 0 45762 0 0 151430 0 0 24566 0 0 34323 0 0 29898 0 0 40140 0 0 38296 0 0 30871 0 0 43105 0 0 49129 0 0 45013 0 0 143630 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 104840000 104840000 0 0 NaN 4381 343 368 368 1833 1934;1935 2088;2089;2090 2339;2340;2341;2342;2343;2344 2089 2341 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20125 2089 2341 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20125 2089 2341 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20125 P09874 373 P09874 P09874 Poly [ADP-ribose] polymerase 1 PARP1 sp|P09874|PARP1_HUMAN Poly [ADP-ribose] polymerase 1 OS=Homo sapiens GN=PARP1 PE=1 SV=4 0.249347 0 3.18396E-06 133.47 116.67 133.47 T PPETSASVAATPPPSTASAPAAVNSSASADK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IFPPETS(0.002)ASVAAT(0.249)PPPS(0.249)T(0.249)AS(0.249)APAAVNSSASADKPLSNMK IFPPET(-29.11)S(-21.18)AS(-27.96)VAAT(0)PPPS(0)T(0)AS(0)APAAVNS(-46.53)S(-52.88)AS(-67.86)ADKPLS(-93.52)NMK 18 6 -0.20395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4382 343 373 373 1833 1934;1935 2091 2345 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20071 2091 2345 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20071 2091 2345 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20071 P0C1Z6 207 P0C1Z6 P0C1Z6 TCF3 fusion partner TFPT sp|P0C1Z6|TFPT_HUMAN TCF3 fusion partner OS=Homo sapiens GN=TFPT PE=1 SV=1 1 93.4997 0.00472874 93.5 72.837 93.5 1 T RRRVPRDGRRAGNALTPELAPVQIKVEEDFG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPXXXXXX AGNALT(1)PELAPVQIK AGNALT(93.5)PELAPVQIK 6 3 0.79756 4837.1 0 0 6877.4 0 0 4950.3 0 0 6953 0 0 6057.8 0 0 3556.1 0 0 6227 0 0 6269 0 0 6672.2 0 0 9003 0 0 4577.6 0 0 6497.2 0 0 4992.1 0 0 7079.9 0 0 6084.9 0 0 3767.1 0 0 6342.6 0 0 6454.4 0 0 6564.6 0 0 8622.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8440700 8440700 0 0 NaN 4383 348 207 207 217 231 249 277 249 277 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19746 249 277 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19746 249 277 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19746 P10398 213 P10398 P10398 Serine/threonine-protein kinase A-Raf ARAF sp|P10398|ARAF_HUMAN Serine/threonine-protein kinase A-Raf OS=Homo sapiens GN=ARAF PE=1 SV=2 0.330795 0 4.29548E-19 246.05 233.56 246.05 T PFPAPANAPLQRIRSTSTPNVHMVSTTAPMD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.331)T(0.331)S(0.256)T(0.082)PNVHMVSTTAPMDSNLIQLTGQSFSTDAAGSR S(0)T(0)S(-1.11)T(-6.04)PNVHMVS(-54.66)T(-51.86)T(-50.43)APMDS(-126.66)NLIQLT(-220.49)GQS(-231.83)FS(-237.84)T(-240.28)DAAGS(-245.66)R 2 4 -0.73547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4384 352 213 213 4532 4831;4832 5148 5716 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21728 5148 5716 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21728 5148 5716 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21728 P10398 215 P10398 P10398 Serine/threonine-protein kinase A-Raf ARAF sp|P10398|ARAF_HUMAN Serine/threonine-protein kinase A-Raf OS=Homo sapiens GN=ARAF PE=1 SV=2 0.280466 0.679604 1.36892E-08 160.03 141.31 160.03 T PAPANAPLQRIRSTSTPNVHMVSTTAPMDSN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP S(0.24)T(0.24)S(0.24)T(0.28)PNVHMVSTTAPMDSNLIQLTGQSFSTDAAGSR S(-0.68)T(-0.68)S(-0.68)T(0.68)PNVHMVS(-43.1)T(-55.07)T(-53.97)APMDS(-90.54)NLIQLT(-146.15)GQS(-153.56)FS(-156.99)T(-158.2)DAAGS(-158.72)R 4 4 1.6222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4385 352 215 215 4532 4831;4832 5146 5714 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19996 5146 5714 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19996 5146 5714 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19996 P10412 146 P10412 P10412 Histone H1.4 HIST1H1E sp|P10412|H14_HUMAN Histone H1.4 OS=Homo sapiens GN=HIST1H1E PE=1 SV=2 0.999365 31.9664 0.00260981 100.18 70.416 69.92 1 T PAGAAKKPKKATGAATPKKSAKKTPKKAKKP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX KAT(0.001)GAAT(0.999)PKK KAT(-31.97)GAAT(31.97)PKK 7 4 0.24267 441330 0 0 361160 0 0 401370 0 0 344840 0 0 120200 0 0 401960 0 0 124420 0 0 309030 0 0 359780 0 0 3236.6 0 0 417460 0 0 341080 0 0 403020 0 0 355980 0 0 138860 0 0 399190 0 0 132890 0 0 313670 0 0 345010 0 0 10200 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 1158300000 1158300000 0 0 NaN 4386 353 146 146 2017;2018 2134;2135 2300;2301 2567;2568 2301 2568 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7660 2300 2567 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7313 2300 2567 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7313 P10412 4 P10412 P10412 Histone H1.4 HIST1H1E sp|P10412|H14_HUMAN Histone H1.4 OS=Homo sapiens GN=HIST1H1E PE=1 SV=2 0.566352 1.15556 2.01554E-07 74.516 63.882 74.516 2 T ____________MSETAPAAPAAPAPAEKTP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.434)ET(0.566)APAAPAAPAPAEKT(0.999)PVK S(-1.16)ET(1.16)APAAPAAPAPAEKT(30.43)PVK 3 3 0.22579 0 12470 0 0 10409 0 0 13650 0 0 11662 0 0 8495.2 0 0 11886 0 0 7760.9 0 0 11783 0 0 12921 0 0 12489 0 0 11804 0 0 9840.6 0 0 13612 0 0 11901 0 0 8919.8 0 0 11926 0 0 8076.5 0 0 12199 0 0 12530 0 0 12033 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 28863000 0 28863000 0 NaN 4387 353 4 4 3719;3720 3954;3955;3956;3957 4217 4685 4217 4685 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13328 4217 4685 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13328 4217 4685 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13328 P10412 18 P10412 P10412 Histone H1.4 HIST1H1E sp|P10412|H14_HUMAN Histone H1.4 OS=Homo sapiens GN=HIST1H1E PE=1 SV=2 1 90.7797 2.70482E-11 170.27 137.27 170.27 1;2 T ETAPAAPAAPAPAEKTPVKKKARKSAGAAKR X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX SETAPAAPAAPAPAEKT(1)PVK S(-105.56)ET(-90.78)APAAPAAPAPAEKT(90.78)PVK 17 3 0.071549 110640 12470 0 89111 10409 0 107530 13650 0 83043 11662 0 70726 8495.2 0 101860 11886 0 70701 7760.9 0 92320 11783 0 91554 12921 0 55174 12489 0 104680 11804 0 84145 9840.6 0 108010 13612 0 85939 11901 0 73966 8919.8 0 101240 11926 0 72539 8076.5 0 94636 12199 0 89452 12530 0 54089 12033 0 4 1 0 4 1 0 4 1 0 4 1 0 4 1 0 4 1 0 4 1 0 4 1 0 4 1 0 4 1 0 4182500000 4153700000 28863000 0 NaN 4388 353 18 18 3719;3720 3954;3955;3956;3957 4215;4216;4217;4218 4682;4683;4684;4685;4686 4215 4682 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11902 4215 4682 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11902 4218 4686 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12074 P11171 559 P11171 P11171 Protein 4.1 EPB41 sp|P11171|41_HUMAN Protein 4.1 OS=Homo sapiens GN=EPB41 PE=1 SV=4 0.45632 0 4.48093E-12 193.49 174.45 193.49 T DGAAAVDSADRSPRPTSAPAITQGQVAEGGV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP S(0.082)PRPT(0.456)S(0.456)APAIT(0.006)QGQVAEGGVLDASAK S(-7.47)PRPT(0)S(0)APAIT(-19.03)QGQVAEGGVLDAS(-187.33)AK 5 4 -0.97812 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4389 360 559 559 3921;4164 4179;4439 4731 5250 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15934 4731 5250 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15934 4731 5250 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15934 P12270 1677 P12270 P12270 Nucleoprotein TPR TPR sp|P12270|TPR_HUMAN Nucleoprotein TPR OS=Homo sapiens GN=TPR PE=1 SV=3 0.974687 15.9719 1.46007E-13 212.28 196.15 212.28 1 T SDPPTANIKPTPVVSTPSKVTAAAMAGNKST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX GIASTSDPPTANIKPTPVVS(0.025)T(0.975)PS(0.001)K GIAS(-182.9)T(-176.63)S(-176.63)DPPT(-126.29)ANIKPT(-72.87)PVVS(-15.97)T(15.97)PS(-31.62)K 21 4 -0.82679 17414 0 0 12371 0 0 18872 0 0 13111 0 0 8938.4 0 0 16744 0 0 9546.9 0 0 14343 0 0 14747 0 0 15040 0 0 16483 0 0 11691 0 0 18799 0 0 13476 0 0 9670.7 0 0 16620 0 0 9831.1 0 0 14933 0 0 14330 0 0 14494 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21495000 21495000 0 0 NaN 4390 370 1677 1677 1468 1545 1667 1847 1667 1847 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15792 1667 1847 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15792 1667 1847 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15792 P12956 455 P12956 P12956 X-ray repair cross-complementing protein 6 XRCC6 sp|P12956|XRCC6_HUMAN X-ray repair cross-complementing protein 6 OS=Homo sapiens GN=XRCC6 PE=1 SV=2 1 111.936 0.000304491 111.94 80.751 111.94 1 T ADDKRKMPFTEKIMATPEQVGKMKAIVEKLR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX IMAT(1)PEQVGK IMAT(111.94)PEQVGK 4 3 -0.6675 5055.1 0 0 4590.3 0 0 4745.3 0 0 4723.9 0 0 5906.7 0 0 5463.4 0 0 4886.8 0 0 5645.7 0 0 4864.4 0 0 2682.4 0 0 4782.3 0 0 4337.1 0 0 4808.4 0 0 4854.1 0 0 5911.1 0 0 5450.6 0 0 5022.7 0 0 5736.8 0 0 4800.6 0 0 2656.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8661000 8661000 0 0 NaN 4391 372 455 455 1891 1996 2155 2414 2155 2414 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15370 2155 2414 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15370 2155 2414 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15370 P12956 305 P12956 P12956 X-ray repair cross-complementing protein 6 XRCC6 sp|P12956|XRCC6_HUMAN X-ray repair cross-complementing protein 6 OS=Homo sapiens GN=XRCC6 PE=1 SV=2 0.457037 0 0.000239627 112.45 83.871 112.45 T RETNEPVKTKTRTFNTSTGGLLLPSDTKRSQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPXX T(0.001)FNT(0.457)S(0.457)T(0.085)GGLLLPSDTKR T(-29.21)FNT(0)S(0)T(-7.29)GGLLLPS(-84.38)DT(-89.46)KR 4 3 0.32311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4392 372 305 305 4708 5019 5346 5941 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18618 5346 5941 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18618 5346 5941 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18618 P13639 57 P13639 P13639 Elongation factor 2 EEF2 sp|P13639|EF2_HUMAN Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 SV=4 0.999744 35.911 0.000279371 119.54 86.397 119.54 1 T KAGIIASARAGETRFTDTRKDEQERCITIKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPXXXXXX FT(1)DTRKDEQER FT(35.91)DT(-35.91)RKDEQER 2 3 0.6018 182770 0 0 81714 0 0 180770 0 0 90712 0 0 93404 0 0 178440 0 0 94734 0 0 120590 0 0 79882 0 0 31114 0 0 172940 0 0 77243 0 0 181080 0 0 94001 0 0 99950 0 0 174270 0 0 95960 0 0 124140 0 0 79449 0 0 32088 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 359730000 359730000 0 0 NaN 4393 378 57 57 1334 1407 1514 1676;1677 1514 1676 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8343 1514 1676 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8343 1514 1676 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8343 P13639 435 P13639 P13639 Elongation factor 2 EEF2 sp|P13639|EF2_HUMAN Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 SV=4 0.999586 33.8251 0.0452079 63.128 50.915 63.128 1 T LVSTGLKVRIMGPNYTPGKKEDLYLKPIQRT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX IMGPNYT(1)PGKK IMGPNY(-33.83)T(33.83)PGKK 7 3 0.12541 18481 0 0 18887 0 0 17477 0 0 17904 0 0 11725 0 0 19884 0 0 11769 0 0 16178 0 0 21834 0 0 5029.9 0 0 17484 0 0 17836 0 0 17586 0 0 18475 0 0 12248 0 0 19805 0 0 12254 0 0 16523 0 0 21117 0 0 5110.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 40533000 40533000 0 0 NaN 4394 378 435 435 1892 1997 2156 2415 2156 2415 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14738 2156 2415 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14738 2156 2415 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14738 P13804 171 P13804 P13804 Electron transfer flavoprotein subunit alpha, mitochondrial ETFA sp|P13804|ETFA_HUMAN Electron transfer flavoprotein subunit alpha, mitochondrial OS=Homo sapiens GN=ETFA PE=1 SV=1 0.567449 1.17904 3.42842E-05 127.1 114.54 127.1 1 T TVKCDEKVKVFSVRGTSFDAAATSGGSASSE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP GT(0.567)S(0.433)FDAAATSGGSASSEK GT(1.18)S(-1.18)FDAAAT(-45.98)S(-66.17)GGS(-87.73)AS(-96.26)S(-100.44)EK 2 3 0.058988 11339 0 0 10082 0 0 11159 0 0 10145 0 0 25084 0 0 10712 0 0 27489 0 0 16263 0 0 11674 0 0 12967 0 0 10729 0 0 9524.2 0 0 11422 0 0 10422 0 0 24652 0 0 10806 0 0 27433 0 0 16488 0 0 12190 0 0 12587 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10355000 10355000 0 0 NaN 4395 381 171 171 1662 1753 1895 2113 1895 2113 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11901 1895 2113 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11901 1895 2113 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11901 P14317 148 P14317 P14317 Hematopoietic lineage cell-specific protein HCLS1 sp|P14317|HCLS1_HUMAN Hematopoietic lineage cell-specific protein OS=Homo sapiens GN=HCLS1 PE=1 SV=3 0.583776 1.46919 0.0103531 89.189 70.443 89.189 1 T KSAVGFDYKGEVEKHTSQKDYSRGFGGRYGV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPXXXXXXXX HT(0.584)S(0.416)QKDYSR HT(1.47)S(-1.47)QKDY(-70.21)S(-65.22)R 2 3 -0.25272 12205 0 0 1893.6 0 0 10959 0 0 2334.4 0 0 8840 0 0 12845 0 0 9680.5 0 0 8857.7 0 0 2346.3 0 0 2687.9 0 0 11544 0 0 1791.3 0 0 11083 0 0 2538.9 0 0 9101 0 0 12361 0 0 9612.7 0 0 9120.4 0 0 2626.2 0 0 2736 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15293000 15293000 0 0 NaN 4396 387 148 148 1759 1858 2005 2235 2005 2235 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5479 2005 2235 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5479 2005 2235 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5479 P14859 270 P14859 P14859 POU domain, class 2, transcription factor 1 POU2F1 sp|P14859|PO2F1_HUMAN POU domain, class 2, transcription factor 1 OS=Homo sapiens GN=POU2F1 PE=1 SV=2 0.82292 6.85994 2.56561E-05 130.05 98.175 130.05 1 T TIAATPIQTLPQSQSTPKRIDTPSLEEPSDL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX TIAATPIQTLPQS(0.008)QS(0.17)T(0.823)PK T(-114.25)IAAT(-105.84)PIQT(-80.71)LPQS(-20.4)QS(-6.86)T(6.86)PK 16 3 -0.24126 6055.7 0 0 6069.8 0 0 6827.6 0 0 8286.8 0 0 5675.3 0 0 7410.1 0 0 5208.5 0 0 6626.1 0 0 6674.8 0 0 13870 0 0 5733.2 0 0 5746.6 0 0 6815.7 0 0 8359.2 0 0 5822.1 0 0 7482.9 0 0 5364.4 0 0 7094.8 0 0 6523.8 0 0 13214 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13519000 13519000 0 0 NaN 4397 390 270 270 4745 5060 5392 5995 5392 5995 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17059 5392 5995 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17059 5392 5995 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17059 P15056 401 P15056 P15056 Serine/threonine-protein kinase B-raf BRAF sp|P15056|BRAF_HUMAN Serine/threonine-protein kinase B-raf OS=Homo sapiens GN=BRAF PE=1 SV=4 0.998434 28.089 2.19064E-08 172.32 150.51 172.32 1 T QGFRGDGGSTTGLSATPPASLPGSLTNVKAL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPPPPPPPXX GDGGSTTGLS(0.002)AT(0.998)PPASLPGSLTNVK GDGGS(-62.87)T(-58.08)T(-50.82)GLS(-28.09)AT(28.09)PPAS(-52.97)LPGS(-110.78)LT(-121.9)NVK 12 3 0.058025 7507.7 0 0 13336 0 0 7383.4 0 0 13923 0 0 10290 0 0 7337.3 0 0 9533.2 0 0 10659 0 0 14307 0 0 35838 0 0 7103.8 0 0 12602 0 0 7475.9 0 0 14154 0 0 10265 0 0 7757.6 0 0 9871.1 0 0 11643 0 0 13915 0 0 33993 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21189000 21189000 0 0 NaN 4398 394 401 401 1389 1465 1574 1738 1574 1738 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19093 1574 1738 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19093 1574 1738 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19093 P16104 137 P16104 P16104 Histone H2AX H2AFX sp|P16104|H2AX_HUMAN Histone H2AX OS=Homo sapiens GN=H2AFX PE=1 SV=2 0.966209 14.5583 0.00434276 91.937 70.474 91.937 2 T SATVGPKAPSGGKKATQASQEY_________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX KAT(0.966)QAS(0.035)QEY(0.999) KAT(14.56)QAS(-14.56)QEY(29.9) 3 2 -0.76239 0 14382 0 0 16199 0 0 14190 0 0 15096 0 0 37650 0 0 16062 0 0 41705 0 0 24875 0 0 16144 0 0 5336 0 0 13609 0 0 15297 0 0 14594 0 0 15583 0 0 36855 0 0 16177 0 0 41557 0 0 24771 0 0 17013 0 0 5600.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 51998000 0 51998000 0 NaN 4399 402 137 137 530;2019 563;2136;2137 2303 2570 2303 2570 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9784 2303 2570 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9784 2303 2570 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9784 P16401 155 P16401 P16401 Histone H1.5 HIST1H1B sp|P16401|H15_HUMAN Histone H1.5 OS=Homo sapiens GN=HIST1H1B PE=1 SV=3 1 51.4359 0.0435371 51.436 15.925 51.436 1 T KKAKKAAGAKKAVKKTPKKAKKPAAAGVKKV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX AVKKT(1)PK AVKKT(51.44)PK 5 3 -1.0278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4400 407 155 155 557 594 635 709 635 709 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8236 635 709 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8236 635 709 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8236 P16401 138 P16401 P16401 Histone H1.5 HIST1H1B sp|P16401|H15_HUMAN Histone H1.5 OS=Homo sapiens GN=HIST1H1B PE=1 SV=3 1 71.5575 0.037003 71.558 26.793 71.558 1 T AKKAGAAKAKKPAGATPKKAKKAAGAKKAVK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPXXXXXXXXXXXXX KPAGAT(1)PK KPAGAT(71.56)PK 6 3 0.14092 123570 0 0 33774 0 0 126150 0 0 33290 0 0 44579 0 0 121820 0 0 49070 0 0 68569 0 0 34647 0 0 4614.3 0 0 116940 0 0 31902 0 0 125890 0 0 35633 0 0 50105 0 0 117490 0 0 49339 0 0 70982 0 0 34798 0 0 5931.9 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 255580000 255580000 0 0 NaN 4401 407 138 138 2150 2272 2446 2723;2724 2446 2723 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8189 2446 2723 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8189 2446 2723 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8189 P16401 4 P16401 P16401 Histone H1.5 HIST1H1B sp|P16401|H15_HUMAN Histone H1.5 OS=Homo sapiens GN=HIST1H1B PE=1 SV=3 0.614195 2.0194 7.26908E-12 154.14 146.99 154.14 1;2 T ____________MSETAPAETATPAPVEKSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.386)ET(0.614)APAETATPAPVEKS(1)PAK S(-2.02)ET(2.02)APAET(-61.99)AT(-49.75)PAPVEKS(49.75)PAK 3 3 -0.49656 38860 25058 0 22955 9593.5 0 40187 25320 0 26955 9817.8 0 36780 15858 0 37736 25855 0 40375 16277 0 37224 16658 0 27586 9718.4 0 17113 12921 0 36776 23712 0 21708 9063.9 0 40354 25366 0 27606 10325 0 37564 16652 0 37369 25109 0 40575 16369 0 37874 17455 0 27762 9867.3 0 16975 12552 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 511410000 450300000 61113000 0 39.025 4402 407 4 4 3721;3722;3723 3959;3960;3961;3962;3963;3964 4220;4225;4227 4688;4689;4698;4700 4225 4698 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13057 4225 4698 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13057 4225 4698 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13057 P16402 147 P16402 P16402 Histone H1.3 HIST1H1D sp|P16402|H13_HUMAN Histone H1.3 OS=Homo sapiens GN=HIST1H1D PE=1 SV=2 1 93.1105 0.00763692 93.111 52.759 93.111 1 T PAGAAKKPKKVAGAATPKKSIKKTPKKVKKP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX VAGAAT(1)PK VAGAAT(93.11)PK 6 2 -0.41416 79414 0 0 93162 0 0 76354 0 0 94806 0 0 75738 0 0 74720 0 0 71848 0 0 81212 0 0 98909 0 0 7627.3 0 0 75134 0 0 88016 0 0 77045 0 0 96920 0 0 76866 0 0 75888 0 0 74063 0 0 81440 0 0 96446 0 0 9061.5 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 123470000 123470000 0 0 NaN 4403 408 147 147 2255;5042 2383;5376 2565;5728 2863;6367 5728 6367 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8984 5728 6367 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8984 5728 6367 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8984 P16402 4 P16402 P16402 Histone H1.3 HIST1H1D sp|P16402|H13_HUMAN Histone H1.3 OS=Homo sapiens GN=HIST1H1D PE=1 SV=2 0.49984 0 5.27861E-05 57.499 44.923 57.499 T ____________MSETAPLAPTIPAPAEKTP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.5)ET(0.5)APLAPTIPAPAEK S(0)ET(0)APLAPT(-31.94)IPAPAEK 3 3 -0.036645 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4404 408 4 4 3724;3725 3965;3966 4228 4701 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19212 4228 4701 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19212 4228 4701 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19212 P16402 18 P16402 P16402 Histone H1.3 HIST1H1D sp|P16402|H13_HUMAN Histone H1.3 OS=Homo sapiens GN=HIST1H1D PE=1 SV=2 0.999753 37.3085 1.40969E-07 98.299 90.112 98.299 1 T ETAPLAPTIPAPAEKTPVKKKAKKAGATAGK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX SETAPLAPTIPAPAEKT(1)PVK S(-45.11)ET(-45.11)APLAPT(-37.31)IPAPAEKT(37.31)PVK 17 3 0.39963 5907.2 0 0 16133 0 0 7475.9 0 0 16501 0 0 12961 0 0 6748.3 0 0 16480 0 0 12790 0 0 19302 0 0 15741 0 0 5595.6 0 0 15242 0 0 7511.4 0 0 16763 0 0 12881 0 0 7304.8 0 0 16683 0 0 13070 0 0 18926 0 0 15118 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 369020000 369020000 0 0 NaN 4405 408 18 18 3725 3966 4229 4702 4229 4702 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18395 4229 4702 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18395 4229 4702 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18395 P16403 146 P16403 P16403 Histone H1.2 HIST1H1C sp|P16403|H12_HUMAN Histone H1.2 OS=Homo sapiens GN=HIST1H1C PE=1 SV=2 1 68.0445 0.0131989 85.163 46.806 68.044 1 T PVGAAKKPKKAAGGATPKKSAKKTPKKAKKP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX KAAGGAT(1)PKK KAAGGAT(68.04)PKK 7 4 0.61544 236010 0 0 316940 0 0 230710 0 0 317220 0 0 71408 0 0 204800 0 0 76566 0 0 199720 0 0 344740 0 0 19868 0 0 223300 0 0 299400 0 0 230670 0 0 323890 0 0 82197 0 0 210270 0 0 85033 0 0 201120 0 0 328780 0 0 23330 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 944380000 944380000 0 0 NaN 4406 409 146 146 1988;1989 2102;2103 2266;2267 2531;2532 2267 2532 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7593 2266 2531 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7193 2267 2532 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7593 P16403 31 P16403 P16403 Histone H1.2 HIST1H1C sp|P16403|H12_HUMAN Histone H1.2 OS=Homo sapiens GN=HIST1H1C PE=1 SV=2 1 65.2776 0.0162339 65.278 30.899 65.278 1 T EKAPVKKKAAKKAGGTPRKASGPPVSELITK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX KAGGT(1)PRK KAGGT(65.28)PRK 5 4 -0.17252 22639 0 0 39271 0 0 22115 0 0 39927 0 0 11605 0 0 22897 0 0 11698 0 0 23556 0 0 41801 0 0 2512 0 0 21420 0 0 37102 0 0 22170 0 0 40682 0 0 12427 0 0 23723 0 0 12727 0 0 23678 0 0 39969 0 0 2910.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10882000 10882000 0 0 NaN 4407 409 31 31 2004 2119 2283 2549 2283 2549 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6257 2283 2549 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6257 2283 2549 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6257 P16403 4 P16403 P16403 Histone H1.2 HIST1H1C sp|P16403|H12_HUMAN Histone H1.2 OS=Homo sapiens GN=HIST1H1C PE=1 SV=2 0.5 0 2.88957E-07 42.059 6.4191 42.059 1 T ____________MSETAPAAPAAAPPAEKAP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.5)ET(0.5)APAAPAAAPPAEK S(0)ET(0)APAAPAAAPPAEK 3 3 -0.2997 14304 0 0 22500 0 0 17933 0 0 24496 0 0 14740 0 0 13939 0 0 12685 0 0 20463 0 0 24253 0 0 1495.7 0 0 13549 0 0 21266 0 0 17806 0 0 24860 0 0 15128 0 0 14527 0 0 13327 0 0 20318 0 0 23440 0 0 1882 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 350990000 350990000 0 0 NaN 4408 409 4 4 3718 3953 4214 4681 4214 4681 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11590 4214 4681 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11590 4214 4681 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11590 P17096 53 P17096 P17096 High mobility group protein HMG-I/HMG-Y HMGA1 sp|P17096|HMGA1_HUMAN High mobility group protein HMG-I/HMG-Y OS=Homo sapiens GN=HMGA1 PE=1 SV=3 0.999836 37.8513 0.0126119 75.819 57.508 75.819 1 T GTALVGSQKEPSEVPTPKRPRGRPKGSKNKG X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX EPSEVPT(1)PK EPS(-37.85)EVPT(37.85)PK 7 3 0.11754 8049.4 0 0 9118.2 0 0 7759.3 0 0 10413 0 0 7781.8 0 0 8679 0 0 6734.9 0 0 7675.3 0 0 10139 0 0 3035 0 0 7615.7 0 0 8621 0 0 7828.2 0 0 10585 0 0 7884.1 0 0 8769.9 0 0 6999 0 0 7829.3 0 0 9859.5 0 0 3035.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 51320000 51320000 0 0 NaN 4409 415 53 53 1091 1149 1237 1361 1237 1361 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10962 1237 1361 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10962 1237 1361 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10962 P17544 55 P17544 P17544 Cyclic AMP-dependent transcription factor ATF-7 ATF7 sp|P17544|ATF7_HUMAN Cyclic AMP-dependent transcription factor ATF-7 OS=Homo sapiens GN=ATF7 PE=1 SV=2 0.792527 5.89653 8.77065E-07 150.23 132.95 150.23 1 T ARTDSVIIADQTPTPTRFLKNCEEVGLFNEL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPXXXXXXXXXXXXXX TDSVIIADQT(0.004)PT(0.204)PT(0.793)R T(-123.02)DS(-116.43)VIIADQT(-23.43)PT(-5.9)PT(5.9)R 14 3 -0.98342 5328.3 0 0 4968.8 0 0 5646.6 0 0 5649.2 0 0 5425.1 0 0 5204.3 0 0 5179.6 0 0 5505.9 0 0 6248.5 0 0 4718 0 0 5043.1 0 0 4697.7 0 0 5664.3 0 0 5751.8 0 0 5516 0 0 5249.1 0 0 5313.5 0 0 5653.3 0 0 6120 0 0 4570 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15793000 15793000 0 0 NaN 4410 418 55 55 4671 4982 5306 5895 5306 5895 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13907 5306 5895 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13907 5306 5895 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13907 P18858 197 P18858 P18858 DNA ligase 1 LIG1 sp|P18858|DNLI1_HUMAN DNA ligase 1 OS=Homo sapiens GN=LIG1 PE=1 SV=1 0.408219 1.50178 8.54457E-07 142.72 120.5 142.72 T TTPPKPLKTSKAETPTESVSEPEVATKQELQ X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPXXXX AET(0.289)PT(0.408)ES(0.233)VS(0.07)EPEVATK AET(-1.5)PT(1.5)ES(-2.44)VS(-7.63)EPEVAT(-100.75)K 5 3 -1.5102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4411 434 197 197 168 176 189 213 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13058 189 213 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13058 189 213 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13058 P18858 183 P18858 P18858 DNA ligase 1 LIG1 sp|P18858|DNLI1_HUMAN DNA ligase 1 OS=Homo sapiens GN=LIG1 PE=1 SV=1 0.978436 16.568 9.61413E-07 153.06 119.81 153.06 1 T EVATEKEGEDGDQPTTPPKPLKTSKAETPTE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXPPPPPPPPPPPPPPPPXXXXXXXXX EGEDGDQPT(0.022)T(0.978)PPKPLK EGEDGDQPT(-16.57)T(16.57)PPKPLK 10 3 0.64758 25678 0 0 26663 0 0 26653 0 0 27510 0 0 26896 0 0 26537 0 0 27351 0 0 29112 0 0 29023 0 0 10964 0 0 24302 0 0 25193 0 0 26785 0 0 28179 0 0 27288 0 0 26696 0 0 27864 0 0 29432 0 0 28567 0 0 10997 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 65881000 65881000 0 0 NaN 4412 434 183 183 954 1008 1093 1207 1093 1207 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12442 1093 1207 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12442 1093 1207 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12442 P18887 198 P18887 P18887 DNA repair protein XRCC1 XRCC1 sp|P18887|XRCC1_HUMAN DNA repair protein XRCC1 OS=Homo sapiens GN=XRCC1 PE=1 SV=2 0.479977 0 3.15104E-18 217.41 190.91 217.41 T NSLRPGALFFSRINKTSPVTASDPAGPSYAA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP INKT(0.48)S(0.48)PVT(0.038)AS(0.002)DPAGPSYAAATLQASSAASSASPVSR INKT(0)S(0)PVT(-11.02)AS(-23.57)DPAGPS(-91.99)Y(-107)AAAT(-141.87)LQAS(-192.73)S(-197.51)AAS(-205)S(-207.9)AS(-212.31)PVS(-215.37)R 4 4 0.20267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4413 435 198 198 1896 2002 2161 2421 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17638 2161 2421 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17638 2161 2421 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17638 P18887 453 P18887 P18887 DNA repair protein XRCC1 XRCC1 sp|P18887|XRCC1_HUMAN DNA repair protein XRCC1 OS=Homo sapiens GN=XRCC1 PE=1 SV=2 0.999774 36.6128 4.97964E-08 151.37 134.7 151.37 2 T KPTQAAGPSSPQKPPTPEETKAASPVLQEDI X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX TKPT(0.001)QAAGPS(0.163)S(0.836)PQKPPT(1)PEETK T(-44.33)KPT(-28.8)QAAGPS(-7.11)S(7.11)PQKPPT(36.61)PEET(-36.61)K 17 4 -0.14729 0 14287 0 0 13080 0 0 15132 0 0 13925 0 0 20067 0 0 16716 0 0 20356 0 0 20459 0 0 17077 0 0 82346 0 0 13522 0 0 12361 0 0 15249 0 0 14291 0 0 20073 0 0 16833 0 0 20617 0 0 22858 0 0 16989 0 0 78012 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 32696000 0 32696000 0 NaN 4414 435 453 453 4761 5078 5411 6016 5411 6016 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10841 5411 6016 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10841 5411 6016 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10841 P19338 84 P19338 P19338 Nucleolin NCL sp|P19338|NUCL_HUMAN Nucleolin OS=Homo sapiens GN=NCL PE=1 SV=3 1 73.9513 0.034291 73.951 47.437 73.951 1 T TKKVAVATPAKKAAVTPGKKAAATPAKKTVT X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX AAVT(1)PGKK AAVT(73.95)PGKK 4 3 0.040366 58167 0 0 35247 0 0 57742 0 0 38344 0 0 16172 0 0 57508 0 0 21875 0 0 42304 0 0 40952 0 0 3962.9 0 0 55039 0 0 33314 0 0 57669 0 0 39490 0 0 18964 0 0 56605 0 0 22515 0 0 43143 0 0 39598 0 0 4710.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 43241000 43241000 0 0 NaN 4415 437 84 84 89 95 103 116 103 116 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8930 103 116 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8930 103 116 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8930 P19338 121 P19338 P19338 Nucleolin NCL sp|P19338|NUCL_HUMAN Nucleolin OS=Homo sapiens GN=NCL PE=1 SV=3 1 100.376 0.00241196 100.38 64.724 100.38 1 T TPGKKGATPGKALVATPGKKGAAIPAKGAKN Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX ALVAT(1)PGKK ALVAT(100.38)PGKK 5 3 -0.20015 162610 0 0 68577 0 0 167310 0 0 68633 0 0 45702 0 0 160870 0 0 46780 0 0 92935 0 0 77201 0 0 4416.2 0 0 153890 0 0 64783 0 0 166710 0 0 71949 0 0 53602 0 0 156290 0 0 48399 0 0 95986 0 0 74884 0 0 6309.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 159470000 159470000 0 0 NaN 4416 437 121 121 327 348 373 414 373 414 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12352 373 414 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12352 373 414 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12352 P19338 106 P19338 P19338 Nucleolin NCL sp|P19338|NUCL_HUMAN Nucleolin OS=Homo sapiens GN=NCL PE=1 SV=3 0.940529 11.9907 0.0385019 73.573 28.237 73.573 1 T ATPAKKTVTPAKAVTTPGKKGATPGKALVAT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY) XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX AVT(0.059)T(0.941)PGK AVT(-11.99)T(11.99)PGK 4 2 0.91845 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4417 437 106 106 576 614 655 730 655 730 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8838 655 730 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8838 655 730 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8838 P19338 76 P19338 P19338 Nucleolin NCL sp|P19338|NUCL_HUMAN Nucleolin OS=Homo sapiens GN=NCL PE=1 SV=3 1 98.9017 0.00392324 98.902 61.574 98.902 1 T AKKVVVSPTKKVAVATPAKKAAVTPGKKAAA X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX VAVAT(1)PAKK VAVAT(98.9)PAKK 5 3 0.1437 55260 0 0 21966 0 0 61173 0 0 19364 0 0 12391 0 0 57357 0 0 12064 0 0 31545 0 0 22442 0 0 1865.4 0 0 52313 0 0 20735 0 0 60660 0 0 20652 0 0 15460 0 0 55476 0 0 12580 0 0 32698 0 0 21703 0 0 2486.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 63001000 63001000 0 0 NaN 4418 437 76 76 5061;5062 5395;5396 5747;5748 6386;6387 5748 6387 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11043 5748 6387 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11043 5748 6387 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11043 P19525 88 P19525 P19525 Interferon-induced, double-stranded RNA-activated protein kinase EIF2AK2 sp|P19525|E2AK2_HUMAN Interferon-induced, double-stranded RNA-activated protein kinase OS=Homo sapiens GN=EIF2AK2 PE=1 SV=2 0.706387 4.51179 7.75326E-05 122.39 107 122.39 1 T EILNKEKKAVSPLLLTTTNSSEGLSMGNYIG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPPP AVS(0.25)PLLLT(0.706)T(0.021)T(0.021)NS(0.001)SEGLSMGNYIGLINR AVS(-4.51)PLLLT(4.51)T(-15.22)T(-15.22)NS(-28)S(-40.21)EGLS(-70.03)MGNY(-86.73)IGLINR 8 3 0.13677 5537.3 0 0 7756.4 0 0 7873.4 0 0 7387.6 0 0 7232.6 0 0 10658 0 0 7034.8 0 0 12900 0 0 8582.5 0 0 123990 0 0 5248.4 0 0 7325.1 0 0 7785.5 0 0 7660.4 0 0 7376.2 0 0 10798 0 0 7212.7 0 0 16589 0 0 8402.7 0 0 117050 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 46264000 46264000 0 0 NaN 4419 439 88 88 567 604 645 720 645 720 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23828 645 720 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23828 645 720 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23828 P20700 19 P20700 P20700 Lamin-B1 LMNB1 sp|P20700|LMNB1_HUMAN Lamin-B1 OS=Homo sapiens GN=LMNB1 PE=1 SV=2 0.499995 0 6.65894E-07 146.43 123.37 146.43 1 T ATPVPPRMGSRAGGPTTPLSPTRLSRLQEKE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX AGGPT(0.5)T(0.5)PLSPTR AGGPT(0)T(0)PLS(-47.17)PT(-66.63)R 5 2 -0.48958 24434 0 0 27078 0 0 23924 0 0 25084 0 0 27664 0 0 23532 0 0 26877 0 0 27000 0 0 28887 0 0 11890 0 0 23119 0 0 25568 0 0 24164 0 0 25852 0 0 27844 0 0 23722 0 0 27451 0 0 27307 0 0 28417 0 0 11821 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 58249000 58249000 0 0 NaN 4420 448 19 19 204 213;214 229 257 229 257 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9497 229 257 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9497 229 257 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9497 P20700 20 P20700 P20700 Lamin-B1 LMNB1 sp|P20700|LMNB1_HUMAN Lamin-B1 OS=Homo sapiens GN=LMNB1 PE=1 SV=2 0.977507 16.3126 6.65894E-07 146.43 123.37 113.07 1;2 T TPVPPRMGSRAGGPTTPLSPTRLSRLQEKEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX AGGPT(0.022)T(0.978)PLS(0.916)PT(0.084)R AGGPT(-16.31)T(16.31)PLS(10.34)PT(-10.34)R 6 2 -0.35351 24434 30597 0 27078 31150 0 23924 31771 0 25084 30026 0 27664 27469 0 23532 32272 0 26877 24533 0 27000 28495 0 28887 30601 0 11890 27156 0 23119 28957 0 25568 29420 0 24164 31866 0 25852 30934 0 27844 28094 0 23722 32251 0 27451 25280 0 27307 29547 0 28417 29937 0 11821 26230 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 97674000 58249000 39425000 0 NaN 4421 448 20 20 204 213;214 229;231;232 257;259;260 231 259 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9787 229 257 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9497 229 257 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9497 P21127 595 P21127 P21127 Cyclin-dependent kinase 11B CDK11B sp|P21127|CD11B_HUMAN Cyclin-dependent kinase 11B OS=Homo sapiens GN=CDK11B PE=1 SV=3 0.999996 53.6562 6.70494E-23 275.85 223.98 275.85 1 T DFGLAREYGSPLKAYTPVVVTLWYRAPELLL X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX AYT(1)PVVVTLWYR AY(-111.38)T(53.66)PVVVT(-53.66)LWY(-137.79)R 3 2 0.36237 32734 0 0 79138 0 0 34154 0 0 67512 0 0 80228 0 0 37585 0 0 109410 0 0 79309 0 0 75980 0 0 171140 0 0 30980 0 0 74693 0 0 34928 0 0 69548 0 0 79076 0 0 39854 0 0 109060 0 0 83093 0 0 76387 0 0 162980 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 216230000 216230000 0 0 NaN 4422 449 595 595 594 633 674 749 674 749 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23797 674 749 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23797 674 749 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23797 P22059 377 P22059 P22059 Oxysterol-binding protein 1 OSBP sp|P22059|OSBP1_HUMAN Oxysterol-binding protein 1 OS=Homo sapiens GN=OSBP PE=1 SV=1 0.499888 0 7.75812E-06 135.3 103.04 135.3 T APEIITMPENLGHKRTGSNISGASSDISLDE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP RT(0.5)GS(0.5)NIS(0.523)GAS(0.214)S(0.261)DIS(0.001)LDEQYK RT(0)GS(0)NIS(3.02)GAS(-3.88)S(-3.02)DIS(-26.05)LDEQY(-79.72)K 2 3 -0.15881 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4423 454 377 377 3518;4730 3735;5043;5044 3981 4420 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15235 3981 4420 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15235 3981 4420 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15235 P22694;P22612;P17612 198;198;198 P22694 P22694 cAMP-dependent protein kinase catalytic subunit beta;cAMP-dependent protein kinase catalytic subunit gamma;cAMP-dependent protein kinase catalytic subunit alpha PRKACB;PRKACG;PRKACA sp|P22694|KAPCB_HUMAN cAMP-dependent protein kinase catalytic subunit beta OS=Homo sapiens GN=PRKACB PE=1 SV=2;sp|P22612|KAPCG_HUMAN cAMP-dependent protein kinase catalytic subunit gamma OS=Homo sapiens GN=PRKACG PE=1 SV=3;sp|P17612|KAPCA_HUMAN cAMP-depend 0.507562 0.132782 4.43809E-11 197.85 173.5 197.85 1 T VTDFGFAKRVKGRTWTLCGTPEYLAPEIILS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP T(0.492)WT(0.508)LCGTPEYLAPEIILSK T(-0.13)WT(0.13)LCGT(-35)PEY(-101.31)LAPEIILS(-180.28)K 3 3 1.2253 14801 0 0 8628.9 0 0 15278 0 0 8384.6 0 0 19557 0 0 16715 0 0 22205 0 0 15040 0 0 9101.3 0 0 114440 0 0 14007 0 0 8150 0 0 15414 0 0 8757.8 0 0 19619 0 0 16577 0 0 22117 0 0 18599 0 0 9536 0 0 108110 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 40441000 40441000 0 0 NaN 4424 462 198 198 5030 5364 5716 6355 5716 6355 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24060 5716 6355 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24060 5716 6355 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24060 P23396 221 P23396 P23396 40S ribosomal protein S3 RPS3 sp|P23396|RS3_HUMAN 40S ribosomal protein S3 OS=Homo sapiens GN=RPS3 PE=1 SV=2 0.997825 26.6195 9.8226E-07 140.3 113.76 140.3 1 T DHVSIVEPKDEILPTTPISEQKGGKPEPPAM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPXXXXXXXXX DEILPT(0.002)T(0.998)PISEQK DEILPT(-26.62)T(26.62)PIS(-58.81)EQK 7 3 0.41154 13438 0 0 23267 0 0 13848 0 0 23775 0 0 14926 0 0 14394 0 0 14409 0 0 19137 0 0 24895 0 0 21730 0 0 12717 0 0 21982 0 0 13933 0 0 24230 0 0 15085 0 0 14947 0 0 14979 0 0 19667 0 0 24119 0 0 20905 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 1464900000 1464900000 0 0 NaN 4425 464 221 221 659 702 748;749 828;829 748 828 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17723 748 828 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17723 748 828 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17723 P23443 444 P23443 P23443 Ribosomal protein S6 kinase beta-1 RPS6KB1 sp|P23443|KS6B1_HUMAN Ribosomal protein S6 kinase beta-1 OS=Homo sapiens GN=RPS6KB1 PE=1 SV=2 0.668767 3.05142 0.01028 91.318 31.968 91.318 1 T EPKIRSPRRFIGSPRTPVSPVKFSPGDFWGR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX T(0.669)PVS(0.331)PVK T(3.05)PVS(-3.05)PVK 1 2 -0.16183 90996 0 0 97572 0 0 102610 0 0 91990 0 0 65536 0 0 92348 0 0 74865 0 0 88949 0 0 104270 0 0 6703.4 0 0 86149 0 0 92141 0 0 102220 0 0 94799 0 0 68854 0 0 92519 0 0 76563 0 0 89556 0 0 101630 0 0 8370.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 143560000 143560000 0 0 NaN 4426 465 444 444 4867;4868 5192;5193 5531 6149 5531 6149 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11327 5531 6149 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11327 5531 6149 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11327 P23528 25 P23528 P23528 Cofilin-1 CFL1 sp|P23528|COF1_HUMAN Cofilin-1 OS=Homo sapiens GN=CFL1 PE=1 SV=3 0.700046 3.83627 2.37689E-05 155.06 113.61 155.06 1 T GVIKVFNDMKVRKSSTPEEVKKRKKAVLFCL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX S(0.289)S(0.011)T(0.7)PEEVK S(-3.84)S(-18.22)T(3.84)PEEVK 3 2 -0.011461 19349 0 0 22480 0 0 17987 0 0 23505 0 0 29346 0 0 16927 0 0 29785 0 0 24233 0 0 23924 0 0 4754.1 0 0 18304 0 0 21242 0 0 18330 0 0 23966 0 0 29110 0 0 17361 0 0 30137 0 0 24167 0 0 23855 0 0 5037.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22518000 22518000 0 0 NaN 4427 467 25 25 2235;4480 2363;4772 5079 5636 5079 5636 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8561 5079 5636 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8561 5079 5636 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8561 P23588 420 P23588 P23588 Eukaryotic translation initiation factor 4B EIF4B sp|P23588|IF4B_HUMAN Eukaryotic translation initiation factor 4B OS=Homo sapiens GN=EIF4B PE=1 SV=2 0.333303 0 4.55482E-05 114.04 102.01 114.04 T PSWRSEETQERERSRTGSESSQTGTSTTSSR X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.333)RT(0.333)GS(0.333)ESSQTGTSTTSSR S(0)RT(0)GS(0)ES(-35.71)S(-56.74)QT(-81.33)GT(-99.09)S(-105.53)T(-109.6)T(-112.46)S(-113.61)S(-113.61)R 3 3 0.40098 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4428 468 420 420 4312;4726 4597;5038 4898 5441 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4637 4898 5441 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4637 4898 5441 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4637 P24928 1870 P24928 P24928 DNA-directed RNA polymerase II subunit RPB1 POLR2A sp|P24928|RPB1_HUMAN DNA-directed RNA polymerase II subunit RPB1 OS=Homo sapiens GN=POLR2A PE=1 SV=2 0.44638 0 0.0124071 71.148 54.482 71.148 T PTSPKYSPTSPKYSPTSPKYSPTSPTYSPTT X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX Y(0.005)S(0.747)PT(0.094)S(0.155)PKY(0.002)S(0.45)PT(0.446)S(0.1)PK Y(-18.96)S(6.9)PT(-9.15)S(-6.9)PKY(-26.76)S(0)PT(0)S(-6.63)PK 11 3 -3.3413 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4429 470 1870 1870 5439 5793 6185 6884 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13270 6185 6884 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13270 6185 6884 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13270 P24928 1919 P24928 P24928 DNA-directed RNA polymerase II subunit RPB1 POLR2A sp|P24928|RPB1_HUMAN DNA-directed RNA polymerase II subunit RPB1 OS=Homo sapiens GN=POLR2A PE=1 SV=2 0.620846 1.95599 0.000110642 128.59 100.29 128.59 2 T PTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPXXXXXXXXXXXX YS(0.274)PT(0.263)S(0.462)PTYS(0.37)PT(0.621)S(0.009)PK Y(-32.49)S(-1.79)PT(-2.52)S(1.79)PT(-30.31)Y(-36.21)S(-1.96)PT(1.96)S(-17.58)PK 11 3 -0.1508 0 16677 0 0 14648 0 0 15897 0 0 14648 0 0 10865 0 0 17829 0 0 9787.8 0 0 14208 0 0 18127 0 0 8370.5 0 0 15778 0 0 13837 0 0 15989 0 0 15091 0 0 11316 0 0 17699 0 0 10243 0 0 14645 0 0 17533 0 0 8210.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 26623000 0 26623000 0 NaN 4430 470 1919 1919 5440 5794;5795 6188 6887 6188 6887 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13822 6188 6887 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13822 6188 6887 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13822 P24928 1905 P24928 P24928 DNA-directed RNA polymerase II subunit RPB1 POLR2A sp|P24928|RPB1_HUMAN DNA-directed RNA polymerase II subunit RPB1 OS=Homo sapiens GN=POLR2A PE=1 SV=2 0.78498 8.29184 8.77991E-08 158.65 137.63 158.65 1 T PTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;Phospho (STY);X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX YSPTSPTYSPTSPVYT(0.098)PT(0.785)S(0.116)PK Y(-131.13)S(-107.87)PT(-101.97)S(-95.27)PT(-88.3)Y(-93.94)S(-75.05)PT(-54.81)S(-48.05)PVY(-32.25)T(-9.03)PT(8.29)S(-8.29)PK 18 3 -0.15065 14783 0 0 18283 0 0 16758 0 0 15314 0 0 12827 0 0 16466 0 0 15558 0 0 19785 0 0 17200 0 0 60009 0 0 13996 0 0 17254 0 0 16717 0 0 15923 0 0 13289 0 0 16607 0 0 15751 0 0 21525 0 0 16901 0 0 56964 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 46072000 46072000 0 0 NaN 4431 470 1905 1905 5441 5796;5797 6189 6888 6189 6888 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16687 6189 6888 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16687 6189 6888 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16687 P24941;Q00526 160;160 P24941 P24941 Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 CDK2;CDK3 sp|P24941|CDK2_HUMAN Cyclin-dependent kinase 2 OS=Homo sapiens GN=CDK2 PE=1 SV=2;sp|Q00526|CDK3_HUMAN Cyclin-dependent kinase 3 OS=Homo sapiens GN=CDK3 PE=1 SV=1 0.951243 12.9028 6.43473E-05 128.73 107.17 128.73 1 T DFGLARAFGVPVRTYTHEVVTLWYRAPEILL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX T(0.049)YT(0.951)HEVVTLWYR T(-12.9)Y(-55.65)T(12.9)HEVVT(-78.74)LWY(-113.34)R 3 3 -0.41794 3613.7 0 0 4549.3 0 0 3199 0 0 3743.3 0 0 3121.4 0 0 3456.4 0 0 3311.6 0 0 4379.6 0 0 4769.2 0 0 4408.1 0 0 3417.9 0 0 4293 0 0 3244.5 0 0 3888.1 0 0 3176.2 0 0 3497.2 0 0 3401.7 0 0 4490.1 0 0 4644 0 0 4252.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 32413000 32413000 0 0 NaN 4432 471 160 160 5036 5370 5722 6361 5722 6361 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20003 5722 6361 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20003 5722 6361 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20003 P26583 179 P26583 P26583 High mobility group protein B2 HMGB2 sp|P26583|HMGB2_HUMAN High mobility group protein B2 OS=Homo sapiens GN=HMGB2 PE=1 SV=2 0.743746 4.62754 0.0123159 70.332 47.096 70.332 1 T AKGKSEAGKKGPGRPTGSKKKNEPEDEEEEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX KGPGRPT(0.744)GS(0.256)K KGPGRPT(4.63)GS(-4.63)K 7 4 -0.064876 42676 0 0 72562 0 0 44242 0 0 72964 0 0 107110 0 0 40781 0 0 108510 0 0 77690 0 0 81041 0 0 3934 0 0 40389 0 0 68549 0 0 45232 0 0 74375 0 0 104980 0 0 42784 0 0 109630 0 0 76617 0 0 81128 0 0 5502.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 90881000 90881000 0 0 NaN 4433 482 179 179 2072 2192 2360 2630 2360 2630 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6513 2360 2630 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6513 2360 2630 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6513 P27708 1833 P27708 P27708 CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase CAD sp|P27708|PYR1_HUMAN CAD protein OS=Homo sapiens GN=CAD PE=1 SV=3 0.670458 4.6397 2.85614E-07 138.88 120 138.88 1 T PQLPPSAPATSEMTTTPERPRRGIPGLPDGR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX KWPQGAVPQLPPSAPAT(0.001)S(0.002)EMT(0.23)T(0.096)T(0.67)PERPR KWPQGAVPQLPPS(-31.36)APAT(-29.79)S(-24.67)EMT(-4.64)T(-8.45)T(4.64)PERPR 23 4 -0.90504 16104 0 0 21110 0 0 16195 0 0 19840 0 0 22270 0 0 16363 0 0 22086 0 0 24179 0 0 23353 0 0 84420 0 0 15239 0 0 19935 0 0 16376 0 0 20393 0 0 22239 0 0 16814 0 0 22526 0 0 26494 0 0 22988 0 0 80051 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 41736000 41736000 0 0 NaN 4434 489 1833 1833 2276 2405 2588 2891;2892;2893 2588 2892 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17500 2588 2892 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17500 2588 2892 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17500 P27816 571 P27816 P27816 Microtubule-associated protein 4 MAP4 sp|P27816|MAP4_HUMAN Microtubule-associated protein 4 OS=Homo sapiens GN=MAP4 PE=1 SV=3 0.999809 37.1842 0.0392562 56.482 44.336 56.482 1 T APLAKDGVLTLANNVTPAKDVPPLSETEATP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPXXXXXXXXXXXX DGVLTLANNVT(1)PAK DGVLT(-37.18)LANNVT(37.18)PAK 11 3 -2.326 7030.3 0 0 7125.4 0 0 9256.8 0 0 7378.8 0 0 5509.5 0 0 6806.3 0 0 5961.2 0 0 8018.5 0 0 8663.1 0 0 4630.3 0 0 6660.8 0 0 6732.5 0 0 9148 0 0 7551.6 0 0 5821.2 0 0 6871.7 0 0 6120.3 0 0 8135.7 0 0 8433.3 0 0 4545.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8855800 8855800 0 0 NaN 4435 491 571 571 691 735 783 865 783 865 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17987 783 865 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17987 783 865 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17987 P27816 521 P27816 P27816 Microtubule-associated protein 4 MAP4 sp|P27816|MAP4_HUMAN Microtubule-associated protein 4 OS=Homo sapiens GN=MAP4 PE=1 SV=3 0.999942 42.3647 7.21127E-07 156.67 128.59 156.67 1 T MSPLSETEMALGKDVTPPPETEVVLIKNVCL X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX DVT(1)PPPETEVVLIK DVT(42.36)PPPET(-42.36)EVVLIK 3 3 0.41527 9009.4 0 0 13826 0 0 10830 0 0 16069 0 0 11375 0 0 11621 0 0 11644 0 0 13812 0 0 17208 0 0 39850 0 0 8532.1 0 0 13074 0 0 10807 0 0 16291 0 0 11520 0 0 11949 0 0 11992 0 0 14970 0 0 16743 0 0 37844 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 28008000 28008000 0 0 NaN 4436 491 521 521 845 894 950 1045;1046 950 1045 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20970 950 1045 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20970 950 1045 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20970 P28749 332 P28749 P28749 Retinoblastoma-like protein 1 RBL1 sp|P28749|RBL1_HUMAN Retinoblastoma-like protein 1 OS=Homo sapiens GN=RBL1 PE=1 SV=3 1 114.298 0.000172102 114.3 97.23 114.3 1 T DERIFLGADAEEEIGTPRKFTRDTPLGKLTA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPXXXXXXXXXXXXX IFLGADAEEEIGT(1)PR IFLGADAEEEIGT(114.3)PR 13 3 0.087322 3140 0 0 3837.9 0 0 3081.3 0 0 3851.6 0 0 4085.2 0 0 3918.4 0 0 5124.7 0 0 4490.4 0 0 4145.9 0 0 10019 0 0 2971 0 0 3625.6 0 0 3120.3 0 0 3954.9 0 0 4100.2 0 0 3950.6 0 0 5139.8 0 0 4783.9 0 0 4132.3 0 0 9538.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5456100 5456100 0 0 NaN 4437 496 332 332 1832 1933 2087 2338 2087 2338 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21032 2087 2338 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21032 2087 2338 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21032 P29590 482 P29590 P29590 Protein PML PML sp|P29590|PML_HUMAN Protein PML OS=Homo sapiens GN=PML PE=1 SV=3 0.5 0 0.00792543 79.744 61.129 79.744 1 T DVSNTTTAQKRKCSQTQCPRKVIKMESEEGK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KCS(0.5)QT(0.5)QCPR KCS(0)QT(0)QCPR 5 3 2.4911 14186 0 0 6818.9 0 0 13582 0 0 7159.6 0 0 31117 0 0 14646 0 0 29613 0 0 17979 0 0 6083.2 0 0 2802.2 0 0 13421 0 0 6443.5 0 0 13923 0 0 7450.8 0 0 30499 0 0 14394 0 0 29571 0 0 17989 0 0 7000.3 0 0 3054.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29888000 29888000 0 0 NaN 4438 501 482 482 2025 2143 2309 2576 2309 2576 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5744 2309 2576 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5744 2309 2576 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5744 P30086 51 P30086 P30086 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide PEBP1 sp|P30086|PEBP1_HUMAN Phosphatidylethanolamine-binding protein 1 OS=Homo sapiens GN=PEBP1 PE=1 SV=3 0.758044 4.96961 0.000101177 130.01 104.69 130.01 1 T ELGKVLTPTQVKNRPTSISWDGLDSGKLYTL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPXXXX NRPT(0.758)S(0.241)IS(0.001)WDGLDSGK NRPT(4.97)S(-4.97)IS(-31.33)WDGLDS(-90.17)GK 4 3 4.1497 19158 0 0 14430 0 0 16065 0 0 13219 0 0 9911.2 0 0 16438 0 0 13469 0 0 14656 0 0 14657 0 0 14914 0 0 18117 0 0 13624 0 0 16286 0 0 13698 0 0 10473 0 0 16339 0 0 13572 0 0 15220 0 0 14412 0 0 14382 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30874000 30874000 0 0 NaN 4439 510 51 51 2904 3078 3296 3655 3296 3655 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16875 3296 3655 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16875 3296 3655 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16875 P30291 190 P30291 P30291 Wee1-like protein kinase WEE1 sp|P30291|WEE1_HUMAN Wee1-like protein kinase OS=Homo sapiens GN=WEE1 PE=1 SV=2 0.99976 36.1914 0.000234314 125.46 90.774 125.46 1 T PHKTFRKLRLFDTPHTPKSLLSKARGIDSSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX LFDTPHT(1)PK LFDT(-36.19)PHT(36.19)PK 7 3 0.44707 13121 0 0 6154.9 0 0 13546 0 0 6782.7 0 0 2607.8 0 0 13054 0 0 3442.5 0 0 8307.3 0 0 6664.8 0 0 1495.8 0 0 12417 0 0 5817.9 0 0 13483 0 0 7026.7 0 0 3307.1 0 0 12748 0 0 3552.3 0 0 8561.8 0 0 6439.5 0 0 1600.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19821000 19821000 0 0 NaN 4440 514 190 190 2348 2481 2670 2982 2670 2982 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15113 2670 2982 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15113 2670 2982 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15113 P30291 173 P30291 P30291 Wee1-like protein kinase WEE1 sp|P30291|WEE1_HUMAN Wee1-like protein kinase OS=Homo sapiens GN=WEE1 PE=1 SV=2 1 123.191 7.37334E-05 123.19 99.771 123.19 2 T RAGEGRRSPRPDHPGTPPHKTFRKLRLFDTP X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPXXXXXXXXXXX S(1)PRPDHPGT(1)PPHK S(123.19)PRPDHPGT(123.19)PPHK 9 4 0.5098 0 10312 0 0 10355 0 0 10377 0 0 12052 0 0 8333.9 0 0 11105 0 0 8891.3 0 0 10323 0 0 12931 0 0 3101.4 0 0 9758.5 0 0 9791.9 0 0 10422 0 0 12256 0 0 8589.6 0 0 11169 0 0 9134.4 0 0 10479 0 0 12588 0 0 3159.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 30172000 0 30172000 0 NaN 4441 514 173 173 4162 4437 4729 5248 4729 5248 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6493 4729 5248 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6493 4729 5248 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6493 P30414 343 P30414 P30414 NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase NKTR sp|P30414|NKTR_HUMAN NK-tumor recognition protein OS=Homo sapiens GN=NKTR PE=1 SV=2 0.999218 31.0664 0.00306898 97.749 73.945 97.749 2 T KSGRKIKGRGTIRYHTPPRSRSCSESDDDDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX Y(0.001)HT(0.999)PPRS(1)R Y(-31.07)HT(31.07)PPRS(86.65)R 3 2 0.64028 0 3466.2 0 0 4035.2 0 0 3792.8 0 0 3483.4 0 0 2655.9 0 0 4257.6 0 0 3358 0 0 3065.6 0 0 3673 0 0 2220.5 0 0 3281.1 0 0 3808.8 0 0 3787.8 0 0 3622.7 0 0 2772.6 0 0 4222.3 0 0 3393.1 0 0 3188.1 0 0 3610.8 0 0 2161.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 4553400 0 4553400 0 NaN 4442 516 343 343 5388 5740 6127 6814 6127 6814 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5408 6127 6814 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5408 6127 6814 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5408 P30622 151 P30622 P30622 CAP-Gly domain-containing linker protein 1 CLIP1 sp|P30622|CLIP1_HUMAN CAP-Gly domain-containing linker protein 1 OS=Homo sapiens GN=CLIP1 PE=1 SV=2 0.41559 1.06982 8.5649E-19 245.69 228.89 245.69 T GLQTTPASRATSPLCTSTASMVSSSPSTPSN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPPPP AT(0.325)S(0.254)PLCT(0.416)S(0.005)TASMVSSSPSTPSNIPQKPSQPAAK AT(-1.07)S(-2.13)PLCT(1.07)S(-19.12)T(-37.79)AS(-62.72)MVS(-142.62)S(-156.29)S(-169.93)PS(-201.07)T(-207.66)PS(-220.22)NIPQKPS(-238.57)QPAAK 7 4 0.064608 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4443 518 151 151 537 571 612 684 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15774 612 684 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15774 612 684 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15774 P31323 69 P31323 P31323 cAMP-dependent protein kinase type II-beta regulatory subunit PRKAR2B sp|P31323|KAP3_HUMAN cAMP-dependent protein kinase type II-beta regulatory subunit OS=Homo sapiens GN=PRKAR2B PE=1 SV=3 0.984751 18.1008 0.00012791 115.74 89.595 115.74 1 T EGRTWGDLGAAAGGGTPSKGVNFAEEPMQSD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPXXXXXXXXXXXX TWGDLGAAAGGGT(0.985)PS(0.015)K T(-87.33)WGDLGAAAGGGT(18.1)PS(-18.1)K 13 3 -0.89358 4974.1 0 0 13085 0 0 5226.6 0 0 13084 0 0 5054.5 0 0 4867.8 0 0 6109 0 0 7630.7 0 0 14298 0 0 6417.9 0 0 4707.8 0 0 12361 0 0 5248.2 0 0 13302 0 0 5162.1 0 0 5292.7 0 0 6392.1 0 0 7740.5 0 0 13760 0 0 6219.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22414000 22414000 0 0 NaN 4444 519 69 69 5028 5362 5714 6353 5714 6353 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17375 5714 6353 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17375 5714 6353 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17375 P33241 175 P33241 P33241 Lymphocyte-specific protein 1 LSP1 sp|P33241|LSP1_HUMAN Lymphocyte-specific protein 1 OS=Homo sapiens GN=LSP1 PE=1 SV=1 0.5 0 3.01609E-12 193.09 175 193.09 1 T AEEEQEEHQKCQQPRTPSPLVLEGTIEQSSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP T(0.5)PS(0.5)PLVLEGTIEQSSPPLSPTTK T(0)PS(0)PLVLEGT(-69.57)IEQS(-140.7)S(-147.19)PPLS(-172.2)PT(-182.4)T(-183.63)K 1 3 0.61556 1964 0 0 3094.9 0 0 3181.5 0 0 2337.4 0 0 6104.7 0 0 3227.2 0 0 6491.2 0 0 4875 0 0 3162 0 0 32825 0 0 1863 0 0 2919.3 0 0 3170.1 0 0 2460.5 0 0 6024.8 0 0 3277.6 0 0 6497.8 0 0 5815.2 0 0 3261.1 0 0 31022 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10805000 10805000 0 0 NaN 4445 531 175 175 4852 5177 5516 6134 5516 6134 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22119 5516 6134 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22119 5516 6134 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22119 P33316 249 P33316 P33316 Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial DUT sp|P33316|DUT_HUMAN Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial OS=Homo sapiens GN=DUT PE=1 SV=4 0.771605 5.28707 1.91864E-06 147.1 116.66 147.1 1 T QALDDTERGSGGFGSTGKN____________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX GSGGFGS(0.228)T(0.772)GKN GS(-70.16)GGFGS(-5.29)T(5.29)GKN 8 2 -0.020895 45386 0 0 51944 0 0 47837 0 0 50940 0 0 42299 0 0 49349 0 0 45339 0 0 51015 0 0 57881 0 0 23125 0 0 42956 0 0 49064 0 0 47966 0 0 52339 0 0 43307 0 0 49600 0 0 46349 0 0 51804 0 0 56580 0 0 22956 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 27632000 27632000 0 0 NaN 4446 532 249 249 1610 1696 1832 2037;2038 1832 2037 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9514 1832 2037 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9514 1832 2037 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9514 P35236 66 P35236 P35236 Tyrosine-protein phosphatase non-receptor type 7 PTPN7 sp|P35236|PTN7_HUMAN Tyrosine-protein phosphatase non-receptor type 7 OS=Homo sapiens GN=PTPN7 PE=1 SV=3 1 74.6416 1.08389E-15 232.34 205.67 232.34 1 T DVRSLGAVEPICSVNTPREVTLHFLRTAGHP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPXXXXXXXXXXXXX SLGAVEPICSVNT(1)PR S(-174.23)LGAVEPICS(-74.64)VNT(74.64)PR 13 2 0.41019 13910 0 0 12723 0 0 13118 0 0 12891 0 0 11510 0 0 14002 0 0 10406 0 0 13997 0 0 12853 0 0 44998 0 0 13160 0 0 12020 0 0 13233 0 0 13243 0 0 11762 0 0 14070 0 0 10713 0 0 15396 0 0 12578 0 0 42695 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11019000 11019000 0 0 NaN 4447 543 66 66 3932 4191 4473 4972 4473 4972 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16150 4473 4972 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16150 4473 4972 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16150 P35251 506 P35251 P35251 Replication factor C subunit 1 RFC1 sp|P35251|RFC1_HUMAN Replication factor C subunit 1 OS=Homo sapiens GN=RFC1 PE=1 SV=4 1 79.116 0.0235603 79.116 50.319 79.116 1 T IAVETEMKKESKLERTPQKNVQGKRKISPSK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX LERT(1)PQK LERT(79.12)PQK 4 3 -0.54556 48653 0 0 25483 0 0 49199 0 0 26683 0 0 28016 0 0 46821 0 0 29524 0 0 37573 0 0 29654 0 0 1804.4 0 0 46040 0 0 24080 0 0 49253 0 0 27647 0 0 29703 0 0 45920 0 0 29984 0 0 38101 0 0 29254 0 0 2568.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 50940000 50940000 0 0 NaN 4448 544 506 506 2339 2472 2661 2973 2661 2973 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8581 2661 2973 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8581 2661 2973 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8581 P35269 389 P35269 P35269 General transcription factor IIF subunit 1 GTF2F1 sp|P35269|T2FA_HUMAN General transcription factor IIF subunit 1 OS=Homo sapiens GN=GTF2F1 PE=1 SV=2 0.936033 11.9056 0.000145753 108.19 85.093 108.19 1 T RKPSGGSSRGNSRPGTPSAEGGSTSSTLRAA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPPXX GNS(0.003)RPGT(0.936)PS(0.06)AEGGSTSSTLR GNS(-24.76)RPGT(11.91)PS(-11.91)AEGGS(-36.52)T(-36.52)S(-42.18)S(-53.14)T(-64.5)LR 7 3 -0.20866 15944 0 0 18322 0 0 16241 0 0 17227 0 0 14378 0 0 17731 0 0 15647 0 0 16923 0 0 17796 0 0 2702.4 0 0 15089 0 0 17302 0 0 16316 0 0 17763 0 0 14721 0 0 17745 0 0 15925 0 0 17088 0 0 17468 0 0 2936.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26381000 26381000 0 0 NaN 4449 546 389 389 1534 1615;1616 1744 1937 1744 1937 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6680 1744 1937 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6680 1744 1937 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6680 P35269 445 P35269 P35269 General transcription factor IIF subunit 1 GTF2F1 sp|P35269|T2FA_HUMAN General transcription factor IIF subunit 1 OS=Homo sapiens GN=GTF2F1 PE=1 SV=2 0.6807 3.28835 2.23827E-10 193.38 158.47 193.38 1 T QSLSGKSTPQPPSGKTTPNSGDVQVTEDAVR X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP T(0.681)T(0.319)PNSGDVQVTEDAVRR T(3.29)T(-3.29)PNS(-40.75)GDVQVT(-135.34)EDAVRR 1 3 0.68619 13289 0 0 11152 0 0 12995 0 0 10872 0 0 12572 0 0 14061 0 0 12762 0 0 12495 0 0 12277 0 0 7063.2 0 0 12574 0 0 10533 0 0 13097 0 0 11232 0 0 12785 0 0 13945 0 0 12969 0 0 12807 0 0 12134 0 0 6940 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13132000 13132000 0 0 NaN 4450 546 445 445 4981 5310 5657 6286 5657 6286 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10712 5657 6286 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10712 5657 6286 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10712 P35658 437 P35658 P35658 Nuclear pore complex protein Nup214 NUP214 sp|P35658|NU214_HUMAN Nuclear pore complex protein Nup214 OS=Homo sapiens GN=NUP214 PE=1 SV=2 0.991606 22.7178 2.58738E-05 134.29 112.24 134.29 1;2 T LEGERQPKSPGSTPTTPTSSQAPQKLDASAA X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPXXXXXX S(0.06)PGS(0.776)T(0.156)PT(0.014)T(0.992)PT(0.002)SSQAPQK S(-11.1)PGS(6.97)T(-6.97)PT(-19.74)T(22.72)PT(-26.51)S(-41.36)S(-48.55)QAPQK 8 3 -0.42928 20528 21233 0 31500 27181 0 18440 21045 0 29976 27146 0 15416 17398 0 16509 22581 0 14093 17110 0 20546 22650 0 31389 27394 0 5348 13745 0 19417 20091 0 29748 25676 0 18649 21157 0 30655 27802 0 15820 17877 0 17209 22865 0 14883 17712 0 20614 23131 0 30238 26593 0 5511.3 13467 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 238700000 52747000 185950000 0 NaN 4451 551 437 437 4114 4386;4387 4676;4678 5191;5193;5194 4678 5193 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9229 4678 5193 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9229 4678 5193 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9229 P35658 1021 P35658 P35658 Nuclear pore complex protein Nup214 NUP214 sp|P35658|NU214_HUMAN Nuclear pore complex protein Nup214 OS=Homo sapiens GN=NUP214 PE=1 SV=2 0.738461 4.51213 1.22397E-10 189.47 154.85 189.47 1 T DEAVVQAPRHAPVVRTPSIQPSLLPHAAPFA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP T(0.738)PS(0.261)IQPSLLPHAAPFAK T(4.51)PS(-4.51)IQPS(-34.62)LLPHAAPFAK 1 3 -0.74966 8455.1 0 0 11414 0 0 8180.6 0 0 9497 0 0 5627 0 0 13702 0 0 9800.9 0 0 17767 0 0 12964 0 0 42978 0 0 7999.6 0 0 10772 0 0 8229.8 0 0 9935.8 0 0 5923.1 0 0 13678 0 0 9862.6 0 0 18959 0 0 12657 0 0 40881 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27065000 27065000 0 0 NaN 4452 551 1021 1021 4847 5172 5511 6129 5511 6129 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20387 5511 6129 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20387 5511 6129 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20387 P35659 13 P35659 P35659 Protein DEK DEK sp|P35659|DEK_HUMAN Protein DEK OS=Homo sapiens GN=DEK PE=1 SV=1 0.858539 7.83471 6.98175E-05 91.873 75.732 86.551 1 T ___MSASAPAAEGEGTPTQPASEKEPEMPGP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPPPPPPPPP SASAPAAEGEGT(0.859)PT(0.141)QPASEK S(-50.07)AS(-50.07)APAAEGEGT(7.83)PT(-7.83)QPAS(-39.53)EK 12 3 0.27016 11922 0 0 9329.5 0 0 12002 0 0 10267 0 0 12558 0 0 11902 0 0 11801 0 0 11132 0 0 9998 0 0 7177.6 0 0 11282 0 0 8818.6 0 0 12086 0 0 10511 0 0 12699 0 0 11861 0 0 11999 0 0 11412 0 0 9941.5 0 0 7016.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12032000 12032000 0 0 NaN 4453 552 13 13 3599;3600 3826;3827 4079;4080 4535;4536 4079 4535 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9537 4080 4536 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12878 4079 4535 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9537 P36507 394 P36507 P36507 Dual specificity mitogen-activated protein kinase kinase 2 MAP2K2 sp|P36507|MP2K2_HUMAN Dual specificity mitogen-activated protein kinase kinase 2 OS=Homo sapiens GN=MAP2K2 PE=1 SV=1 0.999896 39.836 6.84252E-06 153.11 114.32 153.11 1 T FAGWLCKTLRLNQPGTPTRTAV_________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX LNQPGT(1)PTR LNQPGT(39.84)PT(-39.84)R 6 2 0.12502 56975 0 0 71643 0 0 54726 0 0 62715 0 0 60265 0 0 53257 0 0 56474 0 0 59972 0 0 68134 0 0 3637.9 0 0 53904 0 0 67628 0 0 55296 0 0 64787 0 0 60788 0 0 53895 0 0 57987 0 0 60005 0 0 66734 0 0 4813.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 776010000 776010000 0 0 NaN 4454 554 394 394 2483 2622 2816 3143 2816 3143 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8017 2816 3143 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8017 2816 3143 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8017 P36542 144 P36542 P36542 ATP synthase subunit gamma, mitochondrial ATP5C1 sp|P36542|ATPG_HUMAN ATP synthase subunit gamma, mitochondrial OS=Homo sapiens GN=ATP5C1 PE=1 SV=1 0.55966 1.04137 0.00120403 99.481 79.694 99.481 1 T MLVGIGDKIRGILYRTHSDQFLVAFKEVGRK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPXXXXX T(0.56)HS(0.44)DQFLVAFK T(1.04)HS(-1.04)DQFLVAFK 1 3 0.78866 4839.6 0 0 8673.8 0 0 4717.2 0 0 7262.6 0 0 5860 0 0 5462.6 0 0 6113.9 0 0 6943.3 0 0 8906.4 0 0 4493.6 0 0 4579 0 0 8185.8 0 0 4771.5 0 0 7514.2 0 0 5885.5 0 0 5582.8 0 0 6287.7 0 0 7042.6 0 0 8669.6 0 0 4392 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10681000 10681000 0 0 NaN 4455 555 144 144 4738 5053 5385 5988 5385 5988 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19712 5385 5988 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19712 5385 5988 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19712 P38432 303 P38432 P38432 Coilin COIL sp|P38432|COIL_HUMAN Coilin OS=Homo sapiens GN=COIL PE=1 SV=1 0.933537 11.5272 0.000369783 122.86 76.922 122.86 1 T NTTADKLAIKLGFSLTPSKGKTSGTTSSSSD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX LGFS(0.066)LT(0.934)PS(0.001)K LGFS(-11.53)LT(11.53)PS(-30.75)K 6 2 0.8107 27531 0 0 33142 0 0 29839 0 0 30657 0 0 13687 0 0 25148 0 0 14691 0 0 25860 0 0 33606 0 0 18583 0 0 26060 0 0 31294 0 0 29717 0 0 31541 0 0 14876 0 0 25497 0 0 15424 0 0 26472 0 0 32357 0 0 18097 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 69495000 69495000 0 0 NaN 4456 563 303 303 2364 2497 2686 2999 2686 2999 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20547 2686 2999 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20547 2686 2999 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20547 P39687;O95626 15;15 P39687 P39687 Acidic leucine-rich nuclear phosphoprotein 32 family member A;Acidic leucine-rich nuclear phosphoprotein 32 family member D ANP32A;ANP32D sp|P39687|AN32A_HUMAN Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Homo sapiens GN=ANP32A PE=1 SV=1;sp|O95626|AN32D_HUMAN Acidic leucine-rich nuclear phosphoprotein 32 family member D OS=Homo sapiens GN=ANP32D PE=2 SV=2 0.999466 32.7227 0.00417207 99.283 63.339 99.283 1 T _MEMGRRIHLELRNRTPSDVKELVLDNSRSN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX NRT(0.999)PS(0.001)DVK NRT(32.72)PS(-32.72)DVK 3 3 0.049072 33358 0 0 24699 0 0 36192 0 0 25582 0 0 40305 0 0 33797 0 0 39251 0 0 34212 0 0 27338 0 0 5402.5 0 0 31576 0 0 23337 0 0 36329 0 0 26345 0 0 40632 0 0 33525 0 0 39679 0 0 34464 0 0 27480 0 0 5878.9 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 105120000 105120000 0 0 NaN 4457 567 15 15 2908 3082 3300;3301 3659;3660 3300 3659 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6531 3300 3659 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6531 3300 3659 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6531 P41212 18 P41212 P41212 Transcription factor ETV6 ETV6 sp|P41212|ETV6_HUMAN Transcription factor ETV6 OS=Homo sapiens GN=ETV6 PE=1 SV=1 0.982478 17.4939 2.78693E-08 171.31 156.69 171.31 1 T ETPAQCSIKQERISYTPPESPVPSYASSTPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP IS(0.017)YT(0.982)PPESPVPSYASSTPLHVPVPR IS(-17.49)Y(-47.31)T(17.49)PPES(-51.17)PVPS(-109.25)Y(-118.95)AS(-125.32)S(-127.68)T(-132.96)PLHVPVPR 4 3 2.1278 5059.4 0 0 5152.5 0 0 6047.8 0 0 5500.1 0 0 6730 0 0 5496.3 0 0 10644 0 0 8621.9 0 0 5315.7 0 0 48050 0 0 4791.2 0 0 4869.4 0 0 6048.7 0 0 5626.1 0 0 6839.7 0 0 5639 0 0 10500 0 0 9975.1 0 0 5471 0 0 45444 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 11861000 11861000 0 0 NaN 4458 577 18 18 1958 2069 2233 2494;2495 2233 2495 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20508 2233 2495 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20508 2233 2495 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20508 P42166;P42167 74;74 P42166;P42167 P42167 Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin TMPO sp|P42166|LAP2A_HUMAN Lamina-associated polypeptide 2, isoform alpha OS=Homo sapiens GN=TMPO PE=1 SV=2;sp|P42167|LAP2B_HUMAN Lamina-associated polypeptide 2, isoforms beta/gamma OS=Homo sapiens GN=TMPO PE=1 SV=2 0.999956 43.553 1.35482E-24 275.5 252.52 275.5 1 T SKGPPDFSSDEEREPTPVLGSGAAAAGRSRA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPPPPPPPPXXX GPPDFSSDEEREPT(1)PVLGSGAAAAGR GPPDFS(-82.84)S(-86.86)DEEREPT(43.55)PVLGS(-43.55)GAAAAGR 14 3 0.29664 22763 0 0 14797 0 0 23092 0 0 15687 0 0 13425 0 0 24315 0 0 15422 0 0 19994 0 0 18515 0 0 30270 0 0 21540 0 0 13983 0 0 23118 0 0 16191 0 0 14225 0 0 23990 0 0 15687 0 0 21135 0 0 18138 0 0 28966 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 444480000 444480000 0 0 NaN 4459 581;582 74;74 74 1551 1633 1762;1763 1956;1957 1762 1956 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14739 1762 1956 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14739 1762 1956 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14739 P42166;P42167 160;160 P42166;P42167 P42167 Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin TMPO sp|P42166|LAP2A_HUMAN Lamina-associated polypeptide 2, isoform alpha OS=Homo sapiens GN=TMPO PE=1 SV=2;sp|P42167|LAP2B_HUMAN Lamina-associated polypeptide 2, isoforms beta/gamma OS=Homo sapiens GN=TMPO PE=1 SV=2 0.957462 15.492 9.41644E-16 233.28 187.39 233.28 1 T KLLKLREQGTESRSSTPLPTISSSAENTRQN X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX S(0.016)S(0.027)T(0.957)PLPTISSSAENTR S(-17.91)S(-15.49)T(15.49)PLPT(-59.04)IS(-95.55)S(-100.77)S(-105.98)AENT(-159.14)R 3 2 -0.077721 13857 0 0 15084 0 0 15094 0 0 16323 0 0 8405.5 0 0 14210 0 0 9487.8 0 0 14501 0 0 15856 0 0 7346.1 0 0 13117 0 0 14256 0 0 15048 0 0 16650 0 0 8946.1 0 0 14355 0 0 9780.2 0 0 14756 0 0 15375 0 0 7252.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 380160000 380160000 0 0 NaN 4460 581;582 160;160 160 4481 4773 5080 5637 5080 5637 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12599 5080 5637 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12599 5080 5637 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12599 P42167 208 P42167 P42167 Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin TMPO sp|P42167|LAP2B_HUMAN Lamina-associated polypeptide 2, isoforms beta/gamma OS=Homo sapiens GN=TMPO PE=1 SV=2 0.919285 10.565 0.0101663 92.19 69.504 92.19 1 T ELKLEKREPLKGRAKTPVTLKQRRVEHNQSY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX AKT(0.919)PVT(0.081)LK AKT(10.56)PVT(-10.56)LK 3 3 0.27024 363790 0 0 264650 0 0 360900 0 0 258720 0 0 148970 0 0 352280 0 0 165940 0 0 267330 0 0 268010 0 0 11060 0 0 344220 0 0 249980 0 0 361010 0 0 267510 0 0 164030 0 0 347890 0 0 170890 0 0 271780 0 0 260120 0 0 16601 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 660490000 660490000 0 0 NaN 4461 582 208 208 280 301 322 360 322 360 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12382 322 360 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12382 322 360 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12382 P42345 1262 P42345 P42345 Serine/threonine-protein kinase mTOR MTOR sp|P42345|MTOR_HUMAN Serine/threonine-protein kinase mTOR OS=Homo sapiens GN=MTOR PE=1 SV=1 0.683023 3.33407 0.00333914 95.273 66.509 95.273 1 T SGPVETGPMKKLHVSTINLQKAWGAARRVSK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX LHVS(0.317)T(0.683)INLQK LHVS(-3.33)T(3.33)INLQK 5 3 -0.24626 10934 0 0 12349 0 0 11114 0 0 10450 0 0 10840 0 0 12027 0 0 10992 0 0 12362 0 0 11313 0 0 2686.1 0 0 10347 0 0 11655 0 0 11178 0 0 10871 0 0 11019 0 0 11994 0 0 11190 0 0 12468 0 0 11149 0 0 2815.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 33040000 33040000 0 0 NaN 4462 585 1262 1262 2401 2538 2731 3051 2731 3051 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17587 2731 3051 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17587 2731 3051 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17587 P42566 777 P42566 P42566 Epidermal growth factor receptor substrate 15 EPS15 sp|P42566|EPS15_HUMAN Epidermal growth factor receptor substrate 15 OS=Homo sapiens GN=EPS15 PE=1 SV=2 0.923027 10.7887 0.0259532 73.498 47.78 73.498 1 T VKSEDEPPALPPKIGTPTRPCPLPPGKRSIN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX IGT(0.923)PT(0.077)RPCPLPPGK IGT(10.79)PT(-10.79)RPCPLPPGK 3 3 0.024692 11492 0 0 17385 0 0 11305 0 0 17944 0 0 16815 0 0 11767 0 0 17255 0 0 16731 0 0 18754 0 0 9883.2 0 0 10873 0 0 16426 0 0 11463 0 0 18291 0 0 16746 0 0 12151 0 0 17584 0 0 16888 0 0 18441 0 0 9693.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16017000 16017000 0 0 NaN 4463 587 777 777 1846 1949 2106 2360 2106 2360 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13593 2106 2360 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13593 2106 2360 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13593 P42694 1163 P42694 P42694 Probable helicase with zinc finger domain HELZ sp|P42694|HELZ_HUMAN Probable helicase with zinc finger domain OS=Homo sapiens GN=HELZ PE=1 SV=2 0.99996 44.0268 8.76485E-07 141.86 120.23 141.86 1 T QPNPSVLIGNPIRAYTPPPPLGPHPNLGKSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX AYT(1)PPPPLGPHPNLGK AY(-44.03)T(44.03)PPPPLGPHPNLGK 3 3 -1.0087 11708 0 0 11716 0 0 11698 0 0 10792 0 0 14596 0 0 13759 0 0 15712 0 0 13418 0 0 13169 0 0 9586 0 0 11079 0 0 11062 0 0 11817 0 0 11185 0 0 14655 0 0 13672 0 0 15870 0 0 13761 0 0 13102 0 0 9336.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17111000 17111000 0 0 NaN 4464 591 1163 1163 593 632 673 748 673 748 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16184 673 748 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16184 673 748 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16184 P46013 858 P46013 P46013 Antigen KI-67 MKI67 sp|P46013|KI67_HUMAN Antigen KI-67 OS=Homo sapiens GN=MKI67 PE=1 SV=2 0.84334 7.31094 1.54439E-20 258.01 203.91 258.01 1 T KTPRNTYKMTSLETKTSDTETEPSKTVSTAN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPXXXXXX T(0.843)S(0.157)DTETEPSK T(7.31)S(-7.31)DT(-46.63)ET(-105.37)EPS(-169.85)K 1 2 2.0652 17233 0 0 23060 0 0 17030 0 0 23589 0 0 11930 0 0 14426 0 0 11000 0 0 17733 0 0 25898 0 0 4317.1 0 0 16306 0 0 21787 0 0 17095 0 0 24041 0 0 12409 0 0 14918 0 0 11650 0 0 17790 0 0 24922 0 0 4475.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12065000 12065000 0 0 NaN 4465 603 858 858 4909 5234 5577 6199 5577 6199 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8020 5577 6199 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8020 5577 6199 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8020 P46821 1788 P46821 P46821 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 MAP1B sp|P46821|MAP1B_HUMAN Microtubule-associated protein 1B OS=Homo sapiens GN=MAP1B PE=1 SV=2 0.999145 30.8526 0.0180831 73.655 49.566 73.655 1 T LEGEKLSPKSDISPLTPRESSPLYSPTFSDS X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX SDIS(0.001)PLT(0.999)PR S(-44.7)DIS(-30.85)PLT(30.85)PR 7 2 -0.50842 13167 0 0 25982 0 0 11270 0 0 26708 0 0 10621 0 0 12249 0 0 9452.6 0 0 15732 0 0 26781 0 0 5786.3 0 0 12452 0 0 24548 0 0 11447 0 0 27147 0 0 10816 0 0 12978 0 0 10152 0 0 15820 0 0 25690 0 0 5812.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20479000 20479000 0 0 NaN 4466 616 1788 1788 3659 3892 4151 4614 4151 4614 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12536 4151 4614 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12536 4151 4614 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12536 P47736 486 P47736 P47736 Rap1 GTPase-activating protein 1 RAP1GAP sp|P47736|RPGP1_HUMAN Rap1 GTPase-activating protein 1 OS=Homo sapiens GN=RAP1GAP PE=1 SV=2 0.625668 2.23086 1.43441E-05 137.61 112.08 137.61 1 T AKAAGISLIVPGKSPTRKKSGPFGSRRSSAI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPXXXXXXXXXXXXXX AAGISLIVPGKS(0.374)PT(0.626)R AAGIS(-88.58)LIVPGKS(-2.23)PT(2.23)R 14 3 -0.21274 5652.4 0 0 18372 0 0 5479.6 0 0 17710 0 0 5291.7 0 0 5771.9 0 0 6087.4 0 0 9458.4 0 0 17346 0 0 6981.4 0 0 5348 0 0 17352 0 0 5526.8 0 0 18032 0 0 5403 0 0 6377.7 0 0 6466.6 0 0 9554.9 0 0 16638 0 0 6792.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 56132000 56132000 0 0 NaN 4467 619 486 486 34 36 40 50 40 50 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18406 40 50 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18406 40 50 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18406 P48634 610 P48634 P48634 Protein PRRC2A PRRC2A sp|P48634|PRC2A_HUMAN Protein PRRC2A OS=Homo sapiens GN=PRRC2A PE=1 SV=3 0.77967 5.48836 0.0112014 83.064 63.772 83.064 1 T SKEGPEPPEEVPPPTTPPVPKVEPKGDGIGP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPXXXXXXXXXX EGPEPPEEVPPPT(0.22)T(0.78)PPVPK EGPEPPEEVPPPT(-5.49)T(5.49)PPVPK 14 4 -0.48411 20652 0 0 27813 0 0 22710 0 0 24731 0 0 18654 0 0 21947 0 0 18354 0 0 24442 0 0 29167 0 0 21546 0 0 19550 0 0 26256 0 0 22699 0 0 25536 0 0 19176 0 0 22194 0 0 18994 0 0 25070 0 0 28320 0 0 20854 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 126030000 126030000 0 0 NaN 4468 624 610 610 972 1026 1111;1112 1226;1227 1112 1227 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16068 1112 1227 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16068 1112 1227 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16068 P48730 352 P48730 P48730 Casein kinase I isoform delta CSNK1D sp|P48730|KC1D_HUMAN Casein kinase I isoform delta OS=Homo sapiens GN=CSNK1D PE=1 SV=2 0.384189 1.42691 3.36591E-05 124.45 105.2 124.45 T TQEVAPPTPLTPTSHTANTSPRPVSGMERER X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPPXX GTQEVAPPTPLTPT(0.003)S(0.011)HT(0.384)ANT(0.277)S(0.277)PRPVS(0.048)GMER GT(-102.3)QEVAPPT(-57.24)PLT(-36.56)PT(-20.56)S(-15.5)HT(1.43)ANT(-1.43)S(-1.43)PRPVS(-9)GMER 17 4 -0.47449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4469 629 352 352 1661 1752 1894 2112 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13089 1894 2112 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13089 1894 2112 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13089 P49790 632 P49790 P49790 Nuclear pore complex protein Nup153 NUP153 sp|P49790|NU153_HUMAN Nuclear pore complex protein Nup153 OS=Homo sapiens GN=NUP153 PE=1 SV=2 0.665102 3.21961 0.000102306 103.84 79.799 103.84 1 T FASPKIDSVAAQPTATSPVVYTRPAISSFSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPXXXXXXXX IDSVAAQPT(0.018)AT(0.665)S(0.317)PVVYTR IDS(-67.2)VAAQPT(-15.75)AT(3.22)S(-3.22)PVVY(-59.05)T(-33.5)R 11 3 0.33731 9011.7 0 0 9891.5 0 0 9158.5 0 0 9661.4 0 0 8400.3 0 0 11353 0 0 8938.8 0 0 8541.4 0 0 10242 0 0 7041.3 0 0 8527.9 0 0 9342.8 0 0 9205.4 0 0 9961.2 0 0 8578.2 0 0 11282 0 0 9108.8 0 0 8888.8 0 0 10050 0 0 6827.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18977000 18977000 0 0 NaN 4470 654 632 632 1800;1801 1900;1901 2047 2283 2047 2283 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15567 2047 2283 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15567 2047 2283 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15567 P49790 515 P49790 P49790 Nuclear pore complex protein Nup153 NUP153 sp|P49790|NU153_HUMAN Nuclear pore complex protein Nup153 OS=Homo sapiens GN=NUP153 PE=1 SV=2 0.422936 0 0.000742702 100.21 69.381 100.21 T SPINSSQALTNKVQMTSPSSTGSPMFKFSSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXXXPPPPPPPPPPPPPPPXXXX VQMT(0.423)S(0.423)PS(0.154)STGSPMFK VQMT(0)S(0)PS(-4.39)S(-31.06)T(-40.17)GS(-56.25)PMFK 4 3 -0.52751 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4471 654 515 515 5225 5569;5570 5937 6601 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15693 5937 6601 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15693 5937 6601 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15693 P49792 1412 P49792 P49792 E3 SUMO-protein ligase RanBP2 RANBP2 sp|P49792|RBP2_HUMAN E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2 1 83.499 0.0159737 83.499 20.216 83.499 1 T PKTSPENVQDRFALVTPKKEGHWDCSICLVR X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX FALVT(1)PK FALVT(83.5)PK 5 2 -0.54203 21785 0 0 26729 0 0 21172 0 0 25860 0 0 9172.3 0 0 21079 0 0 10707 0 0 22992 0 0 30628 0 0 11890 0 0 20612 0 0 25245 0 0 21210 0 0 26528 0 0 10057 0 0 21388 0 0 11370 0 0 23347 0 0 29376 0 0 11728 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 33493000 33493000 0 0 NaN 4472 655 1412 1412 1235 1300 1400 1552 1400 1552 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19008 1400 1552 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19008 1400 1552 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19008 P49792;Q7Z3J3;P0DJD0;P0DJD1;A6NKT7 799;800;790;798;800 P49792 P49792 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 3 RANBP2;RGPD4;RGPD1;RGPD2;RGPD3 sp|P49792|RBP2_HUMAN E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2;sp|Q7Z3J3|RGPD4_HUMAN RanBP2-like and GRIP domain-containing protein 4 OS=Homo sapiens GN=RGPD4 PE=2 SV=3;sp|P0DJD0|RGPD1_HUMAN RANBP2-like and GRIP domain-containing pr 0.982326 17.6967 0.033903 64.103 35.806 64.103 1;2 T RYSLSPSKSYKYSPKTPPRWAEDQNSLLKMI X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX Y(0.001)S(0.017)PKT(0.982)PPR Y(-30.01)S(-17.7)PKT(17.7)PPR 5 3 0.55453 10212 26554 0 22914 45407 0 11045 30293 0 21157 45081 0 10191 19397 0 11268 36213 0 11671 21500 0 14193 34866 0 21792 50958 0 1666.1 28756 0 9666.3 25141 0 21636 42893 0 11066 30159 0 21672 46165 0 10422 20385 0 11775 36731 0 12086 22591 0 14173 35892 0 21073 49030 0 1897.3 27884 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 72182000 16111000 56071000 0 NaN 4473 655 799 799 4596;5430 4902;5783 5222;6173 5799;6870 6173 6870 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9033 6173 6870 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9033 6173 6870 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9033 P49915 331 P49915 P49915 GMP synthase [glutamine-hydrolyzing] GMPS sp|P49915|GUAA_HUMAN GMP synthase [glutamine-hydrolyzing] OS=Homo sapiens GN=GMPS PE=1 SV=1 0.739007 4.73455 6.77247E-15 233.97 167.47 233.97 1 T DRTPRKRISKTLNMTTSPEEKRKIIGDTFVK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX TLNMT(0.013)T(0.739)S(0.248)PEEK T(-71.3)LNMT(-17.69)T(4.73)S(-4.73)PEEK 6 2 0.23842 22357 0 0 47837 0 0 22194 0 0 42966 0 0 20154 0 0 19470 0 0 20303 0 0 28985 0 0 49825 0 0 10690 0 0 21155 0 0 45162 0 0 22332 0 0 44035 0 0 20603 0 0 20704 0 0 21468 0 0 29028 0 0 47910 0 0 10737 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 67422000 67422000 0 0 NaN 4474 659 331 331 4780 5097;5098 5432 6040 5432 6040 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14012 5432 6040 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14012 5432 6040 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14012 P50616 204 P50616 P50616 Protein Tob1 TOB1 sp|P50616|TOB1_HUMAN Protein Tob1 OS=Homo sapiens GN=TOB1 PE=1 SV=1 0.5 0 1.48594E-08 175.59 143.95 175.59 1 T STKMKNSGRSNKVARTSPINLGLNVNDLLKQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPX T(0.5)S(0.5)PINLGLNVNDLLK T(0)S(0)PINLGLNVNDLLK 1 3 0.075999 22220 0 0 21378 0 0 21274 0 0 20583 0 0 9144.7 0 0 23726 0 0 10457 0 0 19175 0 0 23342 0 0 35864 0 0 21022 0 0 20191 0 0 21330 0 0 21233 0 0 10027 0 0 23652 0 0 10934 0 0 20491 0 0 22485 0 0 34214 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 41441000 41441000 0 0 NaN 4475 668 204 204 4937 5262 5605 6229 5605 6229 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23806 5605 6229 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23806 5605 6229 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23806 P50995 453 P50995 P50995 Annexin A11 ANXA11 sp|P50995|ANX11_HUMAN Annexin A11 OS=Homo sapiens GN=ANXA11 PE=1 SV=1 0.996759 24.8794 0.0291534 55.841 24.207 55.841 1 T ERLNKAMRGAGTKDRTLIRIMVSRSETDLLD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX DRT(0.997)LIRIMVS(0.003)R DRT(24.88)LIRIMVS(-24.88)R 3 4 3.1245 11401 0 0 7937.8 0 0 11653 0 0 11811 0 0 11935 0 0 7536.3 0 0 6555.3 0 0 7306.8 0 0 10877 0 0 1058.3 0 0 10790 0 0 7520.6 0 0 11712 0 0 11822 0 0 12023 0 0 7743.9 0 0 7049.4 0 0 7370 0 0 10549 0 0 1165.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27695000 27695000 0 0 NaN 4476 673 453 453 797 845 901 992 901 992 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13231 901 992 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13231 901 992 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13231 P51003 652 P51003 P51003 Poly(A) polymerase alpha PAPOLA sp|P51003|PAPOA_HUMAN Poly(A) polymerase alpha OS=Homo sapiens GN=PAPOLA PE=1 SV=4 0.441737 0.629078 0.000279706 107.65 81.219 107.65 T NAATKIPTPIVGVKRTSSPHKEESPKKTKTE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX T(0.442)S(0.176)S(0.382)PHKEES(1)PKK T(0.63)S(-3.99)S(-0.63)PHKEES(51.84)PKK 1 3 0.38734 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4477 674 652 652 4965;4966 5293;5294;5295 5641 6270 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7161 5641 6270 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7161 5641 6270 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7161 P51532 1384 P51532 P51532 Transcription activator BRG1 SMARCA4 sp|P51532|SMCA4_HUMAN Transcription activator BRG1 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2 0.499902 0 4.1633E-21 252.44 183.1 252.44 1 T RGSRHRKEVDYSDSLTEKQWLKAIEEGTLEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EVDYSDS(0.5)LT(0.5)EK EVDY(-128.58)S(-34.05)DS(0)LT(0)EK 9 2 0.0060816 31929 0 0 29325 0 0 32157 0 0 26985 0 0 52235 0 0 30398 0 0 53817 0 0 36305 0 0 28585 0 0 43029 0 0 30214 0 0 27689 0 0 32616 0 0 27905 0 0 51822 0 0 30472 0 0 54014 0 0 37484 0 0 29275 0 0 41357 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 26509000 26509000 0 0 NaN 4478 679 1384 1384 1203 1266 1365 1512;1513 1365 1512 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14228 1365 1512 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14228 1365 1512 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14228 P51948 51 P51948 P51948 CDK-activating kinase assembly factor MAT1 MNAT1 sp|P51948|MAT1_HUMAN CDK-activating kinase assembly factor MAT1 OS=Homo sapiens GN=MNAT1 PE=1 SV=1 1 80.5855 0.0261024 80.585 56.744 80.585 1 T DLLFVRGAGNCPECGTPLRKSNFRVQLFEDP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPXXXXXXXXXXX GAGNCPECGT(1)PLRK GAGNCPECGT(80.59)PLRK 10 3 -0.48659 11990 0 0 14691 0 0 12473 0 0 15571 0 0 12634 0 0 12592 0 0 12992 0 0 14429 0 0 16635 0 0 4178.6 0 0 11348 0 0 13883 0 0 12535 0 0 15886 0 0 12820 0 0 12785 0 0 13308 0 0 14528 0 0 16259 0 0 4268.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11911000 11911000 0 0 NaN 4479 685 51 51 1360 1434 1542 1705 1542 1705 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9074 1542 1705 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9074 1542 1705 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9074 P52732 926 P52732 P52732 Kinesin-like protein KIF11 KIF11 sp|P52732|KIF11_HUMAN Kinesin-like protein KIF11 OS=Homo sapiens GN=KIF11 PE=1 SV=2 0.997452 25.9268 1.93916E-10 187 140.6 187 1 T CFLEQDLKLDIPTGTTPQRKSYLYPSTLVRT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX LDIPTGT(0.003)T(0.997)PQRK LDIPT(-68.8)GT(-25.93)T(25.93)PQRK 8 3 0.77149 20470 0 0 24235 0 0 21244 0 0 23236 0 0 10563 0 0 22049 0 0 13916 0 0 18477 0 0 23662 0 0 3550.8 0 0 19373 0 0 22888 0 0 21222 0 0 23900 0 0 11407 0 0 22116 0 0 14272 0 0 18780 0 0 22934 0 0 3771.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 144780000 144780000 0 0 NaN 4480 696 926 926 2311 2443 2632 2942 2632 2942 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14634 2632 2942 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14634 2632 2942 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14634 P52948 1108 P52948 P52948 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 NUP98 sp|P52948|NUP98_HUMAN Nuclear pore complex protein Nup98-Nup96 OS=Homo sapiens GN=NUP98 PE=1 SV=4 0.5 0 0.0530589 44.294 20.618 44.294 1 T SVFTMPSPAPEVPLKTVGTRRQLGLVPREKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX T(0.5)VGT(0.5)RRQLGLVPR T(0)VGT(0)RRQLGLVPR 1 4 -4.4799 13618 0 0 10893 0 0 14497 0 0 12517 0 0 10501 0 0 11941 0 0 8490.3 0 0 10432 0 0 12768 0 0 2045.4 0 0 12889 0 0 10299 0 0 14494 0 0 12743 0 0 10868 0 0 11980 0 0 8856.1 0 0 10584 0 0 12417 0 0 2167.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9046500 9046500 0 0 NaN 4481 699 1108 1108 5007 5337 5687 6317 5687 6317 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6610 5687 6317 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6610 5687 6317 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6610 P52948 1111 P52948 P52948 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 NUP98 sp|P52948|NUP98_HUMAN Nuclear pore complex protein Nup98-Nup96 OS=Homo sapiens GN=NUP98 PE=1 SV=4 0.5 0 0.0530589 44.294 20.618 44.294 1 T TMPSPAPEVPLKTVGTRRQLGLVPREKSVTY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T(0.5)VGT(0.5)RRQLGLVPR T(0)VGT(0)RRQLGLVPR 4 4 -4.4799 13618 0 0 10893 0 0 14497 0 0 12517 0 0 10501 0 0 11941 0 0 8490.3 0 0 10432 0 0 12768 0 0 2045.4 0 0 12889 0 0 10299 0 0 14494 0 0 12743 0 0 10868 0 0 11980 0 0 8856.1 0 0 10584 0 0 12417 0 0 2167.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9046500 9046500 0 0 NaN 4482 699 1111 1111 5007 5337 5687 6317 5687 6317 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6610 5687 6317 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6610 5687 6317 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6610 P55196 1202 P55196 P55196 Afadin MLLT4 sp|P55196|AFAD_HUMAN Afadin OS=Homo sapiens GN=MLLT4 PE=1 SV=3 0.490772 0 5.09897E-12 191.21 158.41 191.21 T SAYASGTTAKITSVSTGNLCTEEQTPPPRPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IT(0.003)S(0.015)VS(0.491)T(0.491)GNLCTEEQTPPPRPEAYPIPTQTYTR IT(-22.16)S(-15.13)VS(0)T(0)GNLCT(-30.62)EEQT(-86.33)PPPRPEAY(-160.3)PIPT(-143.12)QT(-147.51)Y(-172.42)T(-147.51)R 6 4 0.69604 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4483 720 1202 1202 1970 2082 2246 2508 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17790 2246 2508 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17790 2246 2508 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17790 P55265 601 P55265 P55265 Double-stranded RNA-specific adenosine deaminase ADAR sp|P55265|DSRAD_HUMAN Double-stranded RNA-specific adenosine deaminase OS=Homo sapiens GN=ADAR PE=1 SV=4 0.788317 5.74099 4.72072E-08 171.64 152.81 171.64 1 T HYSTEKESEKTAESQTPTPSATSFFSGKSPV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPXXX TAES(0.001)QT(0.788)PT(0.21)PSATSFFSGK T(-39.34)AES(-27.56)QT(5.74)PT(-5.74)PS(-45.09)AT(-98.6)S(-114.49)FFS(-133.26)GK 6 3 0.28276 44703 0 0 39288 0 0 49370 0 0 44471 0 0 22467 0 0 47577 0 0 22599 0 0 39026 0 0 43793 0 0 37503 0 0 42318 0 0 37144 0 0 49116 0 0 45395 0 0 24410 0 0 47514 0 0 23578 0 0 40607 0 0 42312 0 0 36217 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 68103000 68103000 0 0 NaN 4484 722 601 601 4609 4916 5236 5814;5815 5236 5814 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18788 5236 5814 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18788 5236 5814 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18788 P61956;P55854 38;37 P61956 P61956 Small ubiquitin-related modifier 2;Small ubiquitin-related modifier 3 SUMO2;SUMO3 sp|P61956|SUMO2_HUMAN Small ubiquitin-related modifier 2 OS=Homo sapiens GN=SUMO2 PE=1 SV=3;sp|P55854|SUMO3_HUMAN Small ubiquitin-related modifier 3 OS=Homo sapiens GN=SUMO3 PE=1 SV=2 0.999561 33.5784 0.0439064 68.847 47.945 68.847 1 T AGQDGSVVQFKIKRHTPLSKLMKAYCERQGL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX RHT(1)PLSK RHT(33.58)PLS(-33.58)K 3 3 0.65179 22530 0 0 29608 0 0 23876 0 0 26055 0 0 28189 0 0 23206 0 0 31662 0 0 31260 0 0 30065 0 0 3333.6 0 0 21324 0 0 27949 0 0 24023 0 0 26923 0 0 28399 0 0 23495 0 0 32018 0 0 31144 0 0 29733 0 0 3862.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27160000 27160000 0 0 NaN 4485 724 38 38 3268 3466 3703 4112 3703 4112 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6253 3703 4112 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6253 3703 4112 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6253 P60468 47 P60468 P60468 Protein transport protein Sec61 subunit beta SEC61B sp|P60468|SC61B_HUMAN Protein transport protein Sec61 subunit beta OS=Homo sapiens GN=SEC61B PE=1 SV=2 0.41388 0 0.00012037 126.59 108.26 126.59 T RQRKNASCGTRSAGRTTSAGTGGMWRFYTED X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPXXXXX T(0.414)T(0.172)S(0.414)AGTGGMWR T(0)T(-3.81)S(0)AGT(-34.9)GGMWR 1 2 -0.19547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4486 740 47 47 4983 5312 5659 6288 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13053 5659 6288 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13053 5659 6288 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13053 P61978 118 P61978 P61978 Heterogeneous nuclear ribonucleoprotein K HNRNPK sp|P61978|HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K OS=Homo sapiens GN=HNRNPK PE=1 SV=1 0.25 0 1.40404E-12 194.25 183.14 194.25 T KIIPTLEEGLQLPSPTATSQLPLESDAVECL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IIPTLEEGLQLPS(0.25)PT(0.25)AT(0.25)S(0.25)QLPLESDAVECLNYQHYK IIPT(-89.03)LEEGLQLPS(0)PT(0)AT(0)S(0)QLPLES(-62.28)DAVECLNY(-145.09)QHY(-154.35)K 15 6 0.021256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4487 752 118 118 1862 1966 2124 2381 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23716 2124 2381 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23716 2124 2381 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23716 P61978 120 P61978 P61978 Heterogeneous nuclear ribonucleoprotein K HNRNPK sp|P61978|HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K OS=Homo sapiens GN=HNRNPK PE=1 SV=1 0.25 0 1.40404E-12 194.25 183.14 194.25 T IPTLEEGLQLPSPTATSQLPLESDAVECLNY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IIPTLEEGLQLPS(0.25)PT(0.25)AT(0.25)S(0.25)QLPLESDAVECLNYQHYK IIPT(-89.03)LEEGLQLPS(0)PT(0)AT(0)S(0)QLPLES(-62.28)DAVECLNY(-145.09)QHY(-154.35)K 17 6 0.021256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4488 752 120 120 1862 1966 2124 2381 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23716 2124 2381 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23716 2124 2381 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23716 P62136 320 P62136 P62136 Serine/threonine-protein phosphatase PP1-alpha catalytic subunit PPP1CA sp|P62136|PP1A_HUMAN Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Homo sapiens GN=PPP1CA PE=1 SV=1 0.999985 48.6442 0.0305563 69.071 48.132 69.071 1 T KYGQFSGLNPGGRPITPPRNSAKAKK_____ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX YGQFSGLNPGGRPIT(1)PPR Y(-60.36)GQFS(-48.64)GLNPGGRPIT(48.64)PPR 15 3 0.084682 7576 0 0 7608.2 0 0 7256.6 0 0 6933.4 0 0 7845.8 0 0 7261.9 0 0 8559.2 0 0 8251.5 0 0 8603.1 0 0 5493.5 0 0 7167.7 0 0 7183.4 0 0 7333.9 0 0 7165.5 0 0 7937.3 0 0 7287.1 0 0 8679.5 0 0 8404 0 0 8486.9 0 0 5363.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 76291000 76291000 0 0 NaN 4489 754 320 320 5382 5734 6117 6802 6117 6802 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16342 6117 6802 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16342 6117 6802 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16342 P62269 60 P62269 P62269 40S ribosomal protein S18 RPS18 sp|P62269|RS18_HUMAN 40S ribosomal protein S18 OS=Homo sapiens GN=RPS18 PE=1 SV=3 1 124.485 0.000141028 124.48 91.626 124.48 1 T LRKADIDLTKRAGELTEDEVERVITIMQNPR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX AGELT(1)EDEVER AGELT(124.48)EDEVER 5 2 -0.52628 15713 0 0 19907 0 0 15907 0 0 22424 0 0 26398 0 0 18346 0 0 25189 0 0 23348 0 0 22065 0 0 45506 0 0 14869 0 0 18820 0 0 16132 0 0 22805 0 0 26149 0 0 18719 0 0 25613 0 0 24597 0 0 21904 0 0 43390 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7953700 7953700 0 0 0.048752 4490 760 60 60 195 204 220 247 220 247 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10873 220 247 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10873 220 247 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10873 P62328 23 P62328 P62328 Thymosin beta-4;Hematopoietic system regulatory peptide TMSB4X sp|P62328|TYB4_HUMAN Thymosin beta-4 OS=Homo sapiens GN=TMSB4X PE=1 SV=2 0.999646 34.5064 0.000279483 112.01 85.6 112.01 1 T AEIEKFDKSKLKKTETQEKNPLPSKETIEQE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX TET(1)QEKNPLPSK T(-34.51)ET(34.51)QEKNPLPS(-66.4)K 3 3 0.65605 25934 0 0 24943 0 0 26459 0 0 22680 0 0 80496 0 0 26753 0 0 87550 0 0 46460 0 0 26513 0 0 15964 0 0 24543 0 0 23550 0 0 27288 0 0 23490 0 0 78539 0 0 26911 0 0 87108 0 0 46320 0 0 28749 0 0 16107 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 68859000 68859000 0 0 NaN 4491 763 23 23 4698 5009 5336 5931 5336 5931 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12026 5336 5931 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12026 5336 5931 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12026 P67775;P62714 304;304 P67775 P67775 Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform PPP2CA;PPP2CB sp|P67775|PP2AA_HUMAN Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Homo sapiens GN=PPP2CA PE=1 SV=1;sp|P62714|PP2AB_HUMAN Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Homo sapiens GN=PPP2CB PE=1 SV 0.999952 43.2308 0.0336069 72.607 61.734 72.607 1 T FDPAPRRGEPHVTRRTPDYFL__________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPXXXXXXXXXX RT(1)PDYFL RT(43.23)PDY(-43.23)FL 2 2 -0.23493 5730.9 0 0 6189.5 0 0 6351.3 0 0 6675.7 0 0 7302.5 0 0 7105.4 0 0 7858 0 0 7042.6 0 0 7955.4 0 0 9684.4 0 0 5425.2 0 0 5849.8 0 0 6372.4 0 0 6831.6 0 0 7362.4 0 0 7120.4 0 0 7974.7 0 0 7358.5 0 0 7845.4 0 0 9282 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8495600 8495600 0 0 NaN 4492 765 304 304 3523 3740 3986 4425 3986 4425 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18802 3986 4425 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18802 3986 4425 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18802 P62750 42 P62750 P62750 60S ribosomal protein L23a RPL23A sp|P62750|RL23A_HUMAN 60S ribosomal protein L23a OS=Homo sapiens GN=RPL23A PE=1 SV=1 0.407899 0 0.0232011 66.664 32.941 66.664 T AVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX IRT(0.408)S(0.408)PT(0.184)FR IRT(0)S(0)PT(-3.45)FR 3 2 -0.18659 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4493 767 42 42 1932 2040 2201 2461 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10541 2201 2461 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10541 2201 2461 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10541 P62753 241 P62753 P62753 40S ribosomal protein S6 RPS6 sp|P62753|RS6_HUMAN 40S ribosomal protein S6 OS=Homo sapiens GN=RPS6 PE=1 SV=1 0.90018 10.0056 9.86117E-05 109.44 90.743 106.79 1;2 T EQIAKRRRLSSLRASTSKSESSQK_______ X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPXXXXXXX RLS(0.116)S(0.884)LRAS(0.091)T(0.9)S(0.009)K RLS(-8.85)S(8.85)LRAS(-10.01)T(10.01)S(-19.99)K 9 4 0.22492 42282 24283 0 41536 32451 0 42655 27104 0 43203 29013 0 35332 23408 0 40324 24796 0 33528 24590 0 42423 28618 0 43141 37528 0 1856.2 5472.7 0 40011 22988 0 39247 30635 0 42837 27087 0 44212 29932 0 36271 24002 0 40577 25101 0 34479 25328 0 42528 28723 0 42160 36480 0 2729.6 5815.6 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 147990000 85166000 62822000 0 NaN 4494 768 241 241 514;2591;2592;3346 546;2737;2738;3548 2936;2937;3786 3270;3271;4204 3786 4204 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10822 2937 3271 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12124 2937 3271 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12124 P62820 195 P62820 P62820 Ras-related protein Rab-1A RAB1A sp|P62820|RAB1A_HUMAN Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3 0.924603 10.886 0.00267512 105.2 62.112 105.2 1 T ATAGGAEKSNVKIQSTPVKQSGGGCC_____ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX IQS(0.075)T(0.925)PVK IQS(-10.89)T(10.89)PVK 4 2 2.4057 59009 0 0 99285 0 0 60730 0 0 92612 0 0 57219 0 0 60978 0 0 68663 0 0 75392 0 0 104160 0 0 130060 0 0 55844 0 0 93753 0 0 61031 0 0 94990 0 0 58469 0 0 62959 0 0 70315 0 0 78984 0 0 101270 0 0 124210 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 46917000 46917000 0 0 NaN 4495 770 195 195 1925 2033 2194 2454 2194 2454 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10883 2194 2454 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10883 2194 2454 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10883 P62854 96 P62854 P62854 40S ribosomal protein S26 RPS26 sp|P62854|RS26_HUMAN 40S ribosomal protein S26 OS=Homo sapiens GN=RPS26 PE=1 SV=3 1 64.5504 0.040209 64.55 48.326 64.55 1 T SKVVRNRSREARKDRTPPPRFRPAGAAPRPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX KDRT(1)PPPR KDRT(64.55)PPPR 4 3 1.1078 7843.7 0 0 13866 0 0 9746.7 0 0 13071 0 0 7548.5 0 0 8619.2 0 0 8222 0 0 9817 0 0 14034 0 0 7410.3 0 0 7429.3 0 0 13094 0 0 9679.3 0 0 13398 0 0 7805 0 0 8867.1 0 0 8496.1 0 0 10024 0 0 13600 0 0 7204.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20339000 20339000 0 0 NaN 4496 771 96 96 2031 2149 2316 2583 2316 2583 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5244 2316 2583 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5244 2316 2583 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5244 P62995 201 P62995 P62995 Transformer-2 protein homolog beta TRA2B sp|P62995|TRA2B_HUMAN Transformer-2 protein homolog beta OS=Homo sapiens GN=TRA2B PE=1 SV=1 0.999811 37.2418 2.48503E-15 216.34 188.5 216.34 1 T GRRIRVDFSITKRPHTPTPGIYMGRPTYGSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP RPHT(1)PTPGIYMGR RPHT(37.24)PT(-37.24)PGIY(-149.32)MGR 4 3 -0.06371 69003 0 0 70749 0 0 64319 0 0 60146 0 0 71696 0 0 70703 0 0 80739 0 0 77699 0 0 61136 0 0 14167 0 0 65277 0 0 66773 0 0 65142 0 0 62573 0 0 72431 0 0 70512 0 0 81214 0 0 78094 0 0 61155 0 0 15138 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 1254400000 1254400000 0 0 NaN 4497 776 201 201 3388;3389 3597;3598;3599 3837;3838;3839 4260;4261;4262;4263 3837 4260 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10131 3837 4260 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10131 3837 4260 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10131 P63208 131 P63208 P63208 S-phase kinase-associated protein 1 SKP1 sp|P63208|SKP1_HUMAN S-phase kinase-associated protein 1 OS=Homo sapiens GN=SKP1 PE=1 SV=2 1 60.1571 0.0505968 60.157 38.526 60.157 1 T LDVTCKTVANMIKGKTPEEIRKTFNIKNDFT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX GKT(1)PEEIRK GKT(60.16)PEEIRK 3 3 0.48646 28195 0 0 51171 0 0 29503 0 0 50345 0 0 40461 0 0 32619 0 0 40171 0 0 40610 0 0 52343 0 0 7093.9 0 0 26685 0 0 48334 0 0 29766 0 0 51458 0 0 40420 0 0 33600 0 0 41238 0 0 40639 0 0 51130 0 0 7619.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 78227000 78227000 0 0 NaN 4498 780 131 131 1491 1569 1694 1875 1694 1875 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9174 1694 1875 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9174 1694 1875 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9174 P68363;Q71U36;Q9BQE3;Q6PEY2;Q13748 41;41;41;41;41 P68363;Q9BQE3 P68363 Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain TUBA1B;TUBA1A;TUBA1C;TUBA3E;TUBA3C sp|P68363|TBA1B_HUMAN Tubulin alpha-1B chain OS=Homo sapiens GN=TUBA1B PE=1 SV=1;sp|Q71U36|TBA1A_HUMAN Tubulin alpha-1A chain OS=Homo sapiens GN=TUBA1A PE=1 SV=1;sp|Q9BQE3|TBA1C_HUMAN Tubulin alpha-1C chain OS=Homo sapiens GN=TUBA1C PE=1 SV=1;sp|Q6PEY2|TBA 0.666189 3.03855 0.0131281 79.237 54.937 79.237 1 T LEHGIQPDGQMPSDKTIGGGDDSFNTFFSET X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP T(0.666)IGGGDDS(0.331)FNT(0.003)FFSETGAGK T(3.04)IGGGDDS(-3.04)FNT(-23.65)FFS(-62.31)ET(-65.36)GAGK 1 3 2.9647 5727.7 0 0 7281.1 0 0 5864.4 0 0 7612.9 0 0 7647.8 0 0 5714.5 0 0 6931.9 0 0 7667.2 0 0 8885.7 0 0 35451 0 0 5420.3 0 0 6880.1 0 0 5917.8 0 0 7765.9 0 0 7647.4 0 0 5903.9 0 0 7143.9 0 0 8683.3 0 0 8684.6 0 0 33558 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10164000 10164000 0 0 0.043808 4499 789;1805 41;41 41 4747 5063 5396 6000 5396 6000 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22857 5396 6000 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22857 5396 6000 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22857 Q71DI3;Q16695;P68431;P84243;Q6NXT2 59;59;59;59;58 Q71DI3;P84243 Q71DI3 Histone H3.2;Histone H3.1t;Histone H3.1;Histone H3.3;Histone H3.3C HIST2H3A;HIST3H3;HIST1H3A;H3F3A;H3F3C sp|Q71DI3|H32_HUMAN Histone H3.2 OS=Homo sapiens GN=HIST2H3A PE=1 SV=3;sp|Q16695|H31T_HUMAN Histone H3.1t OS=Homo sapiens GN=HIST3H3 PE=1 SV=3;sp|P68431|H31_HUMAN Histone H3.1 OS=Homo sapiens GN=HIST1H3A PE=1 SV=2;sp|P84243|H33_HUMAN Histone H3.3 OS=Homo s 0.642275 2.54189 0.00890709 90.853 50.377 90.853 1 T PGTVALREIRRYQKSTELLIRKLPFQRLVRE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX YQKS(0.358)T(0.642)ELLIR Y(-46.24)QKS(-2.54)T(2.54)ELLIR 5 3 0.58348 7686.8 0 0 16414 0 0 8009.6 0 0 14667 0 0 10361 0 0 8311.7 0 0 9439.1 0 0 10914 0 0 16834 0 0 2202.6 0 0 7274.9 0 0 15496 0 0 8073.7 0 0 15064 0 0 10369 0 0 8651.7 0 0 9854.9 0 0 10913 0 0 16297 0 0 2326.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19821000 19821000 0 0 1.0418 4500 790;815 59;59 59 4500;5416 4793;5769 6159 6854 6159 6854 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15629 6159 6854 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15629 6159 6854 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15629 P78344 508 P78344 P78344 Eukaryotic translation initiation factor 4 gamma 2 EIF4G2 sp|P78344|IF4G2_HUMAN Eukaryotic translation initiation factor 4 gamma 2 OS=Homo sapiens GN=EIF4G2 PE=1 SV=1 0.865561 8.08775 5.406E-07 160.13 132.16 160.13 1 T QITMIPPSAQPPRTQTPPLGQTPQLGLKTNP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX T(0.134)QT(0.866)PPLGQTPQLGLK T(-8.09)QT(8.09)PPLGQT(-66.97)PQLGLK 3 3 0.15311 22126 0 0 19775 0 0 21627 0 0 20197 0 0 23214 0 0 18944 0 0 28080 0 0 23711 0 0 23103 0 0 20527 0 0 20935 0 0 18683 0 0 21834 0 0 20692 0 0 23528 0 0 19143 0 0 28213 0 0 24218 0 0 23007 0 0 19878 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 450460000 450460000 0 0 NaN 4501 796 508 508 4888 5213 5553 6172;6173 5553 6172 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18199 5553 6172 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18199 5553 6172 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18199 P78347 558 P78347 P78347 General transcription factor II-I GTF2I sp|P78347|GTF2I_HUMAN General transcription factor II-I OS=Homo sapiens GN=GTF2I PE=1 SV=2 0.875132 8.45621 0.0164781 82.244 62.666 82.244 1 T LLTHSTTEVTQPRTNTPVKEDWNVRITKLRK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX T(0.125)NT(0.875)PVKEDWNVR T(-8.46)NT(8.46)PVKEDWNVR 3 3 0.29181 28263 0 0 31228 0 0 29312 0 0 32752 0 0 32634 0 0 28440 0 0 33132 0 0 33096 0 0 36077 0 0 9845.2 0 0 26748 0 0 29509 0 0 29497 0 0 33467 0 0 32931 0 0 28776 0 0 33782 0 0 33314 0 0 35472 0 0 10036 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 44803000 44803000 0 0 NaN 4502 798 558 558 4819 5141 5480 6098 5480 6098 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13152 5480 6098 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13152 5480 6098 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13152 P84022 8 P84022 P84022 Mothers against decapentaplegic homolog 3 SMAD3 sp|P84022|SMAD3_HUMAN Mothers against decapentaplegic homolog 3 OS=Homo sapiens GN=SMAD3 PE=1 SV=1 0.926685 14.0277 0.00649209 60.49 35.636 60.49 1 T ________MSSILPFTPPIVKRLLGWKKGEQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX S(0.037)S(0.037)ILPFT(0.927)PPIVK S(-14.03)S(-14.03)ILPFT(14.03)PPIVK 7 2 -0.58758 4883.4 0 0 18002 0 0 6576.6 0 0 19095 0 0 5827.5 0 0 6441.4 0 0 7902 0 0 12135 0 0 21713 0 0 25632 0 0 4627.3 0 0 17012 0 0 6519.6 0 0 19336 0 0 6000.4 0 0 7141 0 0 8322.1 0 0 12724 0 0 20838 0 0 24417 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 51622000 51622000 0 0 NaN 4503 810 8 8 4357 4643 4947 5492 4947 5492 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24225 4947 5492 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24225 4947 5492 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24225 Q00610 394 Q00610 Q00610 Clathrin heavy chain 1 CLTC sp|Q00610|CLH1_HUMAN Clathrin heavy chain 1 OS=Homo sapiens GN=CLTC PE=1 SV=5 0.999769 36.3625 0.000363298 119.21 100.43 119.21 1 T EAAKVAANAPKGILRTPDTIRRFQSVPAQPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX GILRT(1)PDTIR GILRT(36.36)PDT(-36.36)IR 5 3 0.20286 7884.6 0 0 13330 0 0 8858.8 0 0 13579 0 0 6387.5 0 0 8454.1 0 0 7969 0 0 9444.2 0 0 14422 0 0 1557.5 0 0 7464.5 0 0 12594 0 0 8837 0 0 13845 0 0 6656.4 0 0 8718.1 0 0 8212.5 0 0 9481.8 0 0 13957 0 0 1685.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 50100000 50100000 0 0 NaN 4504 825 394 394 1472 1549 1671 1851 1671 1851 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12902 1671 1851 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12902 1671 1851 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12902 Q01130 25 Q01130 Q01130 Serine/arginine-rich splicing factor 2 SRSF2 sp|Q01130|SRSF2_HUMAN Serine/arginine-rich splicing factor 2 OS=Homo sapiens GN=SRSF2 PE=1 SV=4 0.953717 13.14 0.00104067 125.18 41.099 125.18 1 T VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRV X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX T(0.954)S(0.046)PDTLRR T(13.14)S(-13.14)PDT(-60.49)LRR 1 2 0.38796 27818 0 0 29946 0 0 28175 0 0 32222 0 0 32244 0 0 23783 0 0 34008 0 0 30328 0 0 37234 0 0 4294 0 0 26325 0 0 28302 0 0 28403 0 0 32810 0 0 32509 0 0 24305 0 0 34620 0 0 30297 0 0 36602 0 0 4745.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 216040000 216040000 0 0 NaN 4505 832 25 25 4931;4932;5074 5256;5257;5409 5600 6223 5600 6223 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6466 5600 6223 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6466 5600 6223 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6466 Q01196 14 Q01196 Q01196 Runt-related transcription factor 1 RUNX1 sp|Q01196|RUNX1_HUMAN Runt-related transcription factor 1 OS=Homo sapiens GN=RUNX1 PE=1 SV=3 0.998743 30.3119 0.000512463 106.13 78.268 75.533 1;2 T __MRIPVDASTSRRFTPPSTALSPGKMSEAL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX RFT(0.999)PPS(0.003)T(0.009)ALS(0.989)PGK RFT(30.31)PPS(-26)T(-20.77)ALS(20.77)PGK 3 3 0.37203 18375 19704 0 15534 18840 0 18442 21868 0 14834 19421 0 27111 26117 0 20227 22170 0 27227 27530 0 20514 22288 0 15733 21912 0 7670 10937 0 17388 18653 0 14670 17801 0 18672 21950 0 15361 19950 0 26991 26267 0 20052 22122 0 27395 27802 0 20797 22682 0 16011 21859 0 7697 10814 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 105740000 63499000 42241000 0 NaN 4506 834 14 14 1336;3237 1409;3433;3434 3669;3670 4070;4071;4072;4073 3670 4072 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15318 3669 4071 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15191 3669 4071 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15191 Q01484 2719 Q01484 Q01484 Ankyrin-2 ANK2 sp|Q01484|ANK2_HUMAN Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4 0.972357 13.6241 0.0176768 66.886 12.281 66.886 3 T SPEEVQFQPVVSKQYTFKMNEDTQEEPGKSE X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP QY(0.985)T(0.972)FKMNEDT(0.68)QEEPGKS(0.363)EEEK QY(16.18)T(13.62)FKMNEDT(2.99)QEEPGKS(-2.99)EEEK 3 4 1.5275 0 0 12370 0 0 17277 0 0 11369 0 0 16224 0 0 13841 0 0 11045 0 0 9868.1 0 0 17726 0 0 15813 0 0 63899 0 0 11701 0 0 16315 0 0 11528 0 0 16639 0 0 13849 0 0 11507 0 0 10398 0 0 19447 0 0 15350 0 0 60579 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 34545000 0 0 34545000 NaN 4507 837 2719 2719 3175 3368 3600 3990 3600 3990 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17331 3600 3990 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17331 3600 3990 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17331 Q01484 2726 Q01484 Q01484 Ankyrin-2 ANK2 sp|Q01484|ANK2_HUMAN Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4 0.67976 2.98512 0.0176768 66.886 12.281 66.886 3 T QPVVSKQYTFKMNEDTQEEPGKSEEEKDSES X;X;X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPPXXXX QY(0.985)T(0.972)FKMNEDT(0.68)QEEPGKS(0.363)EEEK QY(16.18)T(13.62)FKMNEDT(2.99)QEEPGKS(-2.99)EEEK 10 4 1.5275 0 0 12370 0 0 17277 0 0 11369 0 0 16224 0 0 13841 0 0 11045 0 0 9868.1 0 0 17726 0 0 15813 0 0 63899 0 0 11701 0 0 16315 0 0 11528 0 0 16639 0 0 13849 0 0 11507 0 0 10398 0 0 19447 0 0 15350 0 0 60579 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 34545000 0 0 34545000 NaN 4508 837 2726 2726 3175 3368 3600 3990 3600 3990 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17331 3600 3990 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17331 3600 3990 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17331 Q02750 386 Q02750 Q02750 Dual specificity mitogen-activated protein kinase kinase 1 MAP2K1 sp|Q02750|MP2K1_HUMAN Dual specificity mitogen-activated protein kinase kinase 1 OS=Homo sapiens GN=MAP2K1 PE=1 SV=2 0.821689 7.38195 4.77084E-07 140.61 125.33 140.61 1 T FAGWLCSTIGLNQPSTPTHAAGV________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPXXXXXXXX RSDAEEVDFAGWLCSTIGLNQPS(0.15)T(0.822)PT(0.028)HAAGV RS(-119.7)DAEEVDFAGWLCS(-85.31)T(-78.34)IGLNQPS(-7.38)T(7.38)PT(-14.65)HAAGV 24 3 -0.24581 3843.9 0 0 3961.7 0 0 3317.4 0 0 4070.2 0 0 7001.5 0 0 3210.7 0 0 3073.3 0 0 6549.8 0 0 8005.2 0 0 84023 0 0 3635.3 0 0 3743.1 0 0 3408.4 0 0 4158.7 0 0 6836.7 0 0 3456.7 0 0 3452 0 0 8972.2 0 0 7689.5 0 0 79269 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 125770000 125770000 0 0 NaN 4509 853 386 386 3463 3679 3925 4360 3925 4360 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23625 3925 4360 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23625 3925 4360 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23625 Q03111 266 Q03111 Q03111 Protein ENL MLLT1 sp|Q03111|ENL_HUMAN Protein ENL OS=Homo sapiens GN=MLLT1 PE=1 SV=2 0.823787 9.46215 0.023476 73.196 34.582 73.196 1 T FKEPKMALKETKLESTSPKGGPPPPPPPPPR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX LES(0.083)T(0.824)S(0.093)PK LES(-9.97)T(9.46)S(-9.46)PK 4 2 0.44448 91242 0 0 67154 0 0 90595 0 0 72972 0 0 61903 0 0 85619 0 0 69369 0 0 80012 0 0 67369 0 0 4132.9 0 0 86336 0 0 63471 0 0 90924 0 0 74774 0 0 64617 0 0 85193 0 0 70198 0 0 80600 0 0 66557 0 0 5743.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 96150000 96150000 0 0 NaN 4510 856 266 266 2342 2475 2664 2976 2664 2976 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10531 2664 2976 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10531 2664 2976 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10531 Q03164 2169 Q03164 Q03164 Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 KMT2A sp|Q03164|KMT2A_HUMAN Histone-lysine N-methyltransferase 2A OS=Homo sapiens GN=KMT2A PE=1 SV=5 0.648466 3.05889 5.4532E-08 151.18 134.38 151.18 1 T QRSPGCRPLPSAGSPTPTTHEIVTVGDPLLS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPPPPPPPPPPP S(0.008)PGCRPLPS(0.02)AGS(0.321)PT(0.648)PT(0.001)T(0.001)HEIVTVGDPLLSSGLR S(-18.91)PGCRPLPS(-15.11)AGS(-3.06)PT(3.06)PT(-27.02)T(-27.02)HEIVT(-94.84)VGDPLLS(-137.92)S(-137.56)GLR 14 4 0.23069 4616.5 0 0 4406.8 0 0 4853 0 0 4548.7 0 0 3738.7 0 0 5440.7 0 0 4942.6 0 0 5838.5 0 0 5781.6 0 0 24374 0 0 4369.3 0 0 4163.7 0 0 4861.7 0 0 4676.1 0 0 3877.7 0 0 5464.5 0 0 4996.3 0 0 6575.5 0 0 5669.1 0 0 23086 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12895000 12895000 0 0 NaN 4511 857 2169 2169 4100 4371 4661 5175 4661 5175 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19656 4661 5175 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19656 4661 5175 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19656 Q04637 1211 Q04637 Q04637 Eukaryotic translation initiation factor 4 gamma 1 EIF4G1 sp|Q04637|IF4G1_HUMAN Eukaryotic translation initiation factor 4 gamma 1 OS=Homo sapiens GN=EIF4G1 PE=1 SV=4 0.841545 7.25171 1.89088E-09 184.55 119.5 148.5 1 T ERPSQPEGLRKAASLTEDRDRGRDAVKREAA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX AAS(0.158)LT(0.842)EDR AAS(-7.25)LT(7.25)EDR 5 2 0.21705 145420 0 0 193740 0 0 159140 0 0 193080 0 0 103440 0 0 163630 0 0 102230 0 0 152950 0 0 204880 0 0 13989 0 0 137660 0 0 183020 0 0 158770 0 0 197820 0 0 108340 0 0 165230 0 0 106930 0 0 154260 0 0 197800 0 0 16712 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 630090000 630090000 0 0 NaN 4512 861 1211 1211 69;70;1990;1991 74;75;2104;2105 81;82;2268;2269 93;94;2533;2534 81 93 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8588 82 94 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7227 82 94 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7227 Q7Z3S9;Q04721 133;172 Q7Z3S9 Q7Z3S9 Notch homolog 2 N-terminal-like protein;Neurogenic locus notch homolog protein 2;Notch 2 extracellular truncation;Notch 2 intracellular domain NOTCH2NL;NOTCH2 sp|Q7Z3S9|NT2NL_HUMAN Notch homolog 2 N-terminal-like protein OS=Homo sapiens GN=NOTCH2NL PE=1 SV=1;sp|Q04721|NOTC2_HUMAN Neurogenic locus notch homolog protein 2 OS=Homo sapiens GN=NOTCH2 PE=1 SV=3 1 40.5891 0.039814 45.077 25.835 40.589 2 T STCTTVANQFSCKCLTGFTGQKCETDVNECD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX CLT(1)GFT(1)GQK CLT(40.59)GFT(40.59)GQK 3 2 -2.9406 0 28783 0 0 28346 0 0 30968 0 0 25863 0 0 34746 0 0 29966 0 0 36297 0 0 32856 0 0 27157 0 0 12896 0 0 27244 0 0 26764 0 0 31107 0 0 26773 0 0 35050 0 0 29914 0 0 36623 0 0 33233 0 0 27184 0 0 12903 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 278130000 0 278130000 0 NaN 4513 863 133 133 612 651 693;694 769;770 694 770 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11573 693 769 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11376 693 769 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11376 Q7Z3S9;Q04721 136;175 Q7Z3S9 Q7Z3S9 Notch homolog 2 N-terminal-like protein;Neurogenic locus notch homolog protein 2;Notch 2 extracellular truncation;Notch 2 intracellular domain NOTCH2NL;NOTCH2 sp|Q7Z3S9|NT2NL_HUMAN Notch homolog 2 N-terminal-like protein OS=Homo sapiens GN=NOTCH2NL PE=1 SV=1;sp|Q04721|NOTC2_HUMAN Neurogenic locus notch homolog protein 2 OS=Homo sapiens GN=NOTCH2 PE=1 SV=3 1 40.5891 0.039814 45.077 25.835 40.589 2 T TTVANQFSCKCLTGFTGQKCETDVNECDIPG X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX CLT(1)GFT(1)GQK CLT(40.59)GFT(40.59)GQK 6 2 -2.9406 0 28783 0 0 28346 0 0 30968 0 0 25863 0 0 34746 0 0 29966 0 0 36297 0 0 32856 0 0 27157 0 0 12896 0 0 27244 0 0 26764 0 0 31107 0 0 26773 0 0 35050 0 0 29914 0 0 36623 0 0 33233 0 0 27184 0 0 12903 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 278130000 0 278130000 0 NaN 4514 863 136 136 612 651 693;694 769;770 694 770 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11573 693 769 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11376 693 769 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11376 Q05516 282 Q05516 Q05516 Zinc finger and BTB domain-containing protein 16 ZBTB16 sp|Q05516|ZBT16_HUMAN Zinc finger and BTB domain-containing protein 16 OS=Homo sapiens GN=ZBTB16 PE=1 SV=2 0.995676 23.6224 0.0120767 86.803 56.074 86.803 1 T GMGDKVEERGKEGPGTPTRSSVITSARELHY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX GKEGPGT(0.996)PT(0.004)R GKEGPGT(23.62)PT(-23.62)R 7 3 -0.33548 6232.6 0 0 5393.5 0 0 5521.6 0 0 5719.8 0 0 23674 0 0 7508.7 0 0 25947 0 0 13671 0 0 5095.9 0 0 2186.7 0 0 5895 0 0 5096.9 0 0 5827.3 0 0 5881.7 0 0 22965 0 0 7527.9 0 0 25732 0 0 13541 0 0 5912.5 0 0 2375.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10184000 10184000 0 0 NaN 4515 869 282 282 1485 1563 1688 1869 1688 1869 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6143 1688 1869 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6143 1688 1869 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6143 Q08945 642 Q08945 Q08945 FACT complex subunit SSRP1 SSRP1 sp|Q08945|SSRP1_HUMAN FACT complex subunit SSRP1 OS=Homo sapiens GN=SSRP1 PE=1 SV=1 0.590001 1.63745 0.0392762 59.709 42.63 59.709 2 T SKKKKKVKVKMEKKSTPSRGSSSKSSSRQLS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX KS(0.413)T(0.59)PS(0.658)RGS(0.275)S(0.053)S(0.011)K KS(-1.64)T(1.64)PS(3.95)RGS(-3.95)S(-10.81)S(-17.39)K 3 3 -1.141 0 8305.4 0 0 9986.8 0 0 9088 0 0 9696.1 0 0 9675.1 0 0 7937.4 0 0 11169 0 0 9820.1 0 0 10694 0 0 4485.9 0 0 7862 0 0 9432.6 0 0 9116.1 0 0 9945.1 0 0 9804.3 0 0 8066.6 0 0 11285 0 0 9912.5 0 0 10572 0 0 4451.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 11766000 0 11766000 0 NaN 4516 890 642 642 2240 2368 2549 2846 2549 2846 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6083 2549 2846 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6083 2549 2846 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6083 Q09472 887 Q09472 Q09472 Histone acetyltransferase p300 EP300 sp|Q09472|EP300_HUMAN Histone acetyltransferase p300 OS=Homo sapiens GN=EP300 PE=1 SV=2 0.729674 4.51196 9.98039E-05 104.6 95.754 104.6 1 T GPQSQALHPPPRQTPTPPTTQLPQQVQPSLP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP QT(0.258)PT(0.73)PPT(0.011)T(0.001)QLPQQVQPSLPAAPSADQPQQQPR QT(-4.51)PT(4.51)PPT(-18.28)T(-27.5)QLPQQVQPS(-73.38)LPAAPS(-95.66)ADQPQQQPR 4 4 1.5527 3547.5 0 0 3671.6 0 0 4825.9 0 0 4293.1 0 0 3517.8 0 0 3896.1 0 0 4001.9 0 0 6341.7 0 0 4024.2 0 0 80826 0 0 3361.6 0 0 3472 0 0 4770.8 0 0 4363.7 0 0 3654 0 0 4105.9 0 0 4050.9 0 0 8701.9 0 0 3969.8 0 0 76254 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 38004000 38004000 0 0 NaN 4517 895 887 887 3158 3350 3581 3971 3581 3971 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16521 3581 3971 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16521 3581 3971 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16521 Q12834 106 Q12834 Q12834 Cell division cycle protein 20 homolog CDC20 sp|Q12834|CDC20_HUMAN Cell division cycle protein 20 homolog OS=Homo sapiens GN=CDC20 PE=1 SV=2 0.992738 21.3944 4.64713E-10 178.51 149.96 178.51 1 T ASFLLSKENQPENSQTPTKKEHQKAWALNLN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPXXXXXXXXXXX ENQPENSQT(0.993)PT(0.007)KK ENQPENS(-42.12)QT(21.39)PT(-21.39)KK 9 3 -0.71788 31016 0 0 19808 0 0 33995 0 0 19392 0 0 10822 0 0 34442 0 0 10685 0 0 23355 0 0 22021 0 0 2903.5 0 0 29360 0 0 18710 0 0 33776 0 0 20178 0 0 12360 0 0 33718 0 0 11193 0 0 23944 0 0 21247 0 0 3274.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 34669000 34669000 0 0 NaN 4518 905 106 106 1076 1134 1222 1344 1222 1344 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7281 1222 1344 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7281 1222 1344 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7281 Q12834 70 Q12834 Q12834 Cell division cycle protein 20 homolog CDC20 sp|Q12834|CDC20_HUMAN Cell division cycle protein 20 homolog OS=Homo sapiens GN=CDC20 PE=1 SV=2 0.865934 8.32463 0.0122424 87.275 57.972 87.275 1 T TPGRTPGKSSSKVQTTPSKPGGDRYIPHRSA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX VQT(0.127)T(0.866)PS(0.007)KPGGDR VQT(-8.32)T(8.32)PS(-21.11)KPGGDR 4 3 0.52411 39611 0 0 25248 0 0 36159 0 0 24926 0 0 13277 0 0 32842 0 0 14726 0 0 22823 0 0 23673 0 0 835.8 0 0 37470 0 0 23849 0 0 36331 0 0 25740 0 0 14854 0 0 32442 0 0 15166 0 0 23307 0 0 22978 0 0 1315.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 97345000 97345000 0 0 NaN 4519 905 70 70 5233 5578 5946 6610 5946 6610 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7902 5946 6610 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7902 5946 6610 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7902 Q12888 922 Q12888 Q12888 Tumor suppressor p53-binding protein 1 TP53BP1 sp|Q12888|TP53B_HUMAN Tumor suppressor p53-binding protein 1 OS=Homo sapiens GN=TP53BP1 PE=1 SV=2 0.999825 37.5626 9.02702E-06 135.68 110.09 135.68 1 T TLPKEGDIIPPLTGATPPLIGHLKLEPKRHS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPPXXXXXXX EGDIIPPLTGAT(1)PPLIGHLK EGDIIPPLT(-37.56)GAT(37.56)PPLIGHLK 12 3 -0.33659 10026 0 0 13643 0 0 8790.5 0 0 16469 0 0 13707 0 0 10916 0 0 12763 0 0 12631 0 0 18977 0 0 46618 0 0 9482.6 0 0 12904 0 0 8981 0 0 16648 0 0 13612 0 0 11299 0 0 13208 0 0 14008 0 0 18461 0 0 44188 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 34645000 34645000 0 0 NaN 4520 911 922 922 950 1004 1089 1202 1089 1202 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23380 1089 1202 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23380 1089 1202 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23380 Q12888 1056 Q12888 Q12888 Tumor suppressor p53-binding protein 1 TP53BP1 sp|Q12888|TP53B_HUMAN Tumor suppressor p53-binding protein 1 OS=Homo sapiens GN=TP53BP1 PE=1 SV=2 0.996416 24.4409 9.03549E-07 169.33 129.18 169.33 1 T EARQENEARSEDPPTTPIRGNLLHFPSSQGE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX SEDPPT(0.004)T(0.996)PIR S(-108.99)EDPPT(-24.44)T(24.44)PIR 7 2 0.5256 18114 0 0 28746 0 0 16979 0 0 28485 0 0 18549 0 0 18416 0 0 16881 0 0 21354 0 0 31131 0 0 5169 0 0 17136 0 0 27154 0 0 17178 0 0 29102 0 0 18720 0 0 18955 0 0 17653 0 0 21461 0 0 30112 0 0 5361.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 170770000 170770000 0 0 NaN 4521 911 1056 1056 3684 3919 4179 4645 4179 4645 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8761 4179 4645 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8761 4179 4645 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8761 Q12933 7 Q12933 Q12933 TNF receptor-associated factor 2 TRAF2 sp|Q12933|TRAF2_HUMAN TNF receptor-associated factor 2 OS=Homo sapiens GN=TRAF2 PE=1 SV=2 0.898103 9.46514 4.61167E-16 86.856 64.381 86.856 1 T _________MAAASVTPPGSLELLQPGFSKT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPX AAAS(0.102)VT(0.898)PPGSLELLQPGFSK AAAS(-9.47)VT(9.47)PPGS(-34.54)LELLQPGFS(-78.12)K 6 3 -0.031236 8689.8 0 0 17099 0 0 8435.6 0 0 16202 0 0 20244 0 0 8432.2 0 0 18803 0 0 17252 0 0 16577 0 0 32121 0 0 8221.8 0 0 16147 0 0 8650.6 0 0 16565 0 0 19824 0 0 8969.9 0 0 19148 0 0 17931 0 0 16451 0 0 30645 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 75572000 75572000 0 0 NaN 4522 914 7 7 11 12 15 22 15 22 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23757 15 22 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23757 15 22 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23757 Q12968 414 Q12968 Q12968 Nuclear factor of activated T-cells, cytoplasmic 3 NFATC3 sp|Q12968|NFAC3_HUMAN Nuclear factor of activated T-cells, cytoplasmic 3 OS=Homo sapiens GN=NFATC3 PE=1 SV=1 0.353017 0 9.57468E-08 157.07 129.91 157.07 T FTWSKPKPGHTPIFRTSSLPPLDWPLPAHFG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP T(0.353)S(0.353)S(0.294)LPPLDWPLPAHFGQCELK T(0)S(0)S(-0.79)LPPLDWPLPAHFGQCELK 1 3 -0.60815 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4523 915 414 414 4963 5291 5634 6261 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23452 5634 6261 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23452 5634 6261 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23452 Q13029 641 Q13029 Q13029 PR domain zinc finger protein 2 PRDM2 sp|Q13029|PRDM2_HUMAN PR domain zinc finger protein 2 OS=Homo sapiens GN=PRDM2 PE=1 SV=3 0.506706 0.116509 0.0199656 83.204 47.244 83.204 1 T KEPLGSTNSEAKKRRTASPPALPKIKAETDS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPXXXXXXX RT(0.507)AS(0.493)PPALPK RT(0.12)AS(-0.12)PPALPK 2 3 0.34443 8765.1 0 0 9668.7 0 0 8557 0 0 10017 0 0 9259.9 0 0 8714.5 0 0 9158.5 0 0 8562.2 0 0 10081 0 0 1564.3 0 0 8293.3 0 0 9135.6 0 0 8636.8 0 0 10243 0 0 9354.9 0 0 8794.2 0 0 9352.7 0 0 8641.6 0 0 9908.3 0 0 1671.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11453000 11453000 0 0 NaN 4524 918 641 641 3515;4636 3732;4945 3978 4417 3978 4417 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11639 3978 4417 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11639 3978 4417 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11639 Q13098 479 Q13098 Q13098 COP9 signalosome complex subunit 1 GPS1 sp|Q13098|CSN1_HUMAN COP9 signalosome complex subunit 1 OS=Homo sapiens GN=GPS1 PE=1 SV=4 0.999978 46.6288 1.91866E-16 247.44 199 247.44 1 T IHVKSPPREGSQGELTPANSQSRMSTNM___ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPXXXXXXXX EGSQGELT(1)PANSQSR EGS(-65.63)QGELT(46.63)PANS(-46.63)QS(-85.5)R 8 2 0.27034 3694 0 0 5465.9 0 0 4132 0 0 5639.9 0 0 5095.5 0 0 4426.6 0 0 5788.1 0 0 5318.5 0 0 5369.1 0 0 1163 0 0 3497.1 0 0 5164.4 0 0 4148.6 0 0 5760.8 0 0 5123.4 0 0 4504.6 0 0 5847.1 0 0 5335.4 0 0 5315.4 0 0 1218.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7194300 7194300 0 0 NaN 4525 922 479 479 980;4149 1034;4423 1120 1235 1120 1235 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6970 1120 1235 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6970 1120 1235 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6970 Q13111 779 Q13111 Q13111 Chromatin assembly factor 1 subunit A CHAF1A sp|Q13111|CAF1A_HUMAN Chromatin assembly factor 1 subunit A OS=Homo sapiens GN=CHAF1A PE=1 SV=2 0.581046 6.19167 3.94561E-23 267.25 232.07 267.25 1 T GLLSNHTGSPRSPSTTYLHTPTPSEDAAIPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP S(0.14)PS(0.14)T(0.14)T(0.581)YLHTPTPSEDAAIPSK S(-6.19)PS(-6.19)T(-6.19)T(6.19)Y(-70.14)LHT(-57.09)PT(-105.66)PS(-145.69)EDAAIPS(-227.65)K 5 3 -0.096701 8906.5 0 0 10984 0 0 10945 0 0 10575 0 0 8646 0 0 11407 0 0 10654 0 0 14034 0 0 11601 0 0 19513 0 0 8435.5 0 0 10374 0 0 10880 0 0 10896 0 0 8939.1 0 0 11466 0 0 10774 0 0 14563 0 0 11407 0 0 18699 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 89403000 89403000 0 0 NaN 4526 923 779 779 4199 4475 4769 5294 4769 5294 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15832 4769 5294 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15832 4769 5294 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15832 Q13153 230 Q13153 Q13153 Serine/threonine-protein kinase PAK 1 PAK1 sp|Q13153|PAK1_HUMAN Serine/threonine-protein kinase PAK 1 OS=Homo sapiens GN=PAK1 PE=1 SV=2 0.939869 11.9402 1.05188E-16 224.03 194.03 224.03 1 T RDVATSPISPTENNTTPPDALTRNTEKQKKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPPPPPXXXXXXXX DVATSPISPTENNT(0.06)T(0.94)PPDALTR DVAT(-171.64)S(-164.84)PIS(-129.96)PT(-99.68)ENNT(-11.94)T(11.94)PPDALT(-51.36)R 15 3 0.31229 4953.9 0 0 3679.4 0 0 5462.7 0 0 3082.4 0 0 6433.2 0 0 5763.3 0 0 5950.9 0 0 5789.4 0 0 3032.2 0 0 14528 0 0 4689.6 0 0 3472.4 0 0 5482.4 0 0 3244.4 0 0 6461.5 0 0 5684.8 0 0 6000.8 0 0 6243.9 0 0 3115.6 0 0 13813 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17204000 17204000 0 0 NaN 4527 931 230 230 835 883 939 1034 939 1034 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15689 939 1034 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15689 939 1034 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15689 Q13263 541 Q13263 Q13263 Transcription intermediary factor 1-beta TRIM28 sp|Q13263|TIF1B_HUMAN Transcription intermediary factor 1-beta OS=Homo sapiens GN=TRIM28 PE=1 SV=5 0.999999 58.7514 1.01035E-11 189.31 164.85 189.31 1 T AAAAATGQPGTAPAGTPGAPPLAGMAIVKEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPPXX GAAAAATGQPGTAPAGT(1)PGAPPLAGMAIVK GAAAAAT(-107.75)GQPGT(-58.75)APAGT(58.75)PGAPPLAGMAIVK 17 3 0.39836 11409 0 0 23288 0 0 11847 0 0 23123 0 0 21640 0 0 11123 0 0 24182 0 0 19830 0 0 25110 0 0 42311 0 0 10797 0 0 21998 0 0 12028 0 0 23559 0 0 21419 0 0 11873 0 0 24519 0 0 20828 0 0 24737 0 0 40300 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 57540000 57540000 0 0 NaN 4528 942 541 541 1350 1423;1424 1530;1531;1532 1693;1694;1695 1531 1694 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20702 1531 1694 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20702 1531 1694 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20702 Q13263 611 Q13263 Q13263 Transcription intermediary factor 1-beta TRIM28 sp|Q13263|TIF1B_HUMAN Transcription intermediary factor 1-beta OS=Homo sapiens GN=TRIM28 PE=1 SV=5 0.486269 0 2.39909E-12 177.1 165.97 177.1 T SGSTSSGLEVVAPEGTSAPGGGPGTLDDSAT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP LASPSGST(0.001)S(0.001)S(0.001)GLEVVAPEGT(0.486)S(0.486)APGGGPGT(0.025)LDDSATICR LAS(-51.99)PS(-45.84)GS(-33.99)T(-27.52)S(-27.52)S(-27.52)GLEVVAPEGT(0)S(0)APGGGPGT(-12.96)LDDS(-39.35)AT(-47.88)ICR 20 4 -0.18249 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4529 942 611 611 2296 2425 2610 2916 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18994 2610 2916 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18994 2610 2916 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18994 Q13283 143 Q13283 Q13283 Ras GTPase-activating protein-binding protein 1 G3BP1 sp|Q13283|G3BP1_HUMAN Ras GTPase-activating protein-binding protein 1 OS=Homo sapiens GN=G3BP1 PE=1 SV=1 0.5 0 0.000215804 104.44 91.811 104.44 1 T NDIFRYQDEVFGGFVTEPQEESEEEVEEPEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPPPPPPP YQDEVFGGFVT(0.5)EPQEES(0.5)EEEVEEPEER Y(-66.34)QDEVFGGFVT(0)EPQEES(0)EEEVEEPEER 11 2 -0.00076244 0 0 0 0 0 0 194.75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 132.4 0 0 0 0 0 9262 0 0 0 0 0 0 0 0 182.52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 406.76 0 0 0 0 0 8724.3 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 32668000 32668000 0 0 NaN 4530 943 143 143 5413 5766 6154 6847 6154 6847 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21315 6154 6847 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21315 6154 6847 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21315 Q13330 564 Q13330 Q13330 Metastasis-associated protein MTA1 MTA1 sp|Q13330|MTA1_HUMAN Metastasis-associated protein MTA1 OS=Homo sapiens GN=MTA1 PE=1 SV=2 0.987573 19.719 6.66198E-07 151.8 128.05 151.8 1 T KPDPVKSVSSVLSSLTPAKVAPVINNGSPTI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX SVSSVLS(0.002)S(0.011)LT(0.988)PAK S(-91.25)VS(-83.76)S(-76.04)VLS(-27.18)S(-19.72)LT(19.72)PAK 10 3 -0.037016 6240.5 0 0 4167.9 0 0 6650.9 0 0 4544.2 0 0 3566.9 0 0 7358.6 0 0 4615.7 0 0 5410.5 0 0 3921.7 0 0 6084.7 0 0 5906.7 0 0 3939.4 0 0 6637.7 0 0 4688 0 0 3816 0 0 7237.3 0 0 4629 0 0 5686 0 0 3898.9 0 0 5854.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13018000 13018000 0 0 NaN 4531 946 564 564 4576 4881 5199 5774 5199 5774 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19493 5199 5774 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19493 5199 5774 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19493 Q13416 116 Q13416 Q13416 Origin recognition complex subunit 2 ORC2 sp|Q13416|ORC2_HUMAN Origin recognition complex subunit 2 OS=Homo sapiens GN=ORC2 PE=1 SV=2 0.988185 19.224 0.0362331 62.408 44.491 62.408 1 T KHSEKMAKLASELAKTPQKSVSFSLKNDPEI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX LAS(0.012)ELAKT(0.988)PQK LAS(-19.22)ELAKT(19.22)PQK 8 3 -0.84581 19833 0 0 14667 0 0 17763 0 0 14996 0 0 9695.6 0 0 16430 0 0 10368 0 0 15066 0 0 16338 0 0 4215.8 0 0 18759 0 0 13858 0 0 17908 0 0 15400 0 0 10331 0 0 16396 0 0 10685 0 0 15292 0 0 15867 0 0 4318.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14853000 14853000 0 0 NaN 4532 949 116 116 2293 2422 2606 2912 2606 2912 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14881 2606 2912 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14881 2606 2912 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14881 Q13427 358 Q13427 Q13427 Peptidyl-prolyl cis-trans isomerase G PPIG sp|Q13427|PPIG_HUMAN Peptidyl-prolyl cis-trans isomerase G OS=Homo sapiens GN=PPIG PE=1 SV=2 1 55.8154 0.000684425 121.93 89.515 55.815 1;2 T TPSRSRSRDRFRRSETPPHWRQEMQRAQRMR X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX FRRS(1)ET(1)PPHWR FRRS(55.82)ET(55.82)PPHWR 6 3 -0.0036543 10779 11102 0 14939 14738 0 11353 10219 0 13744 14380 0 13402 13124 0 12074 11484 0 12973 11806 0 14185 12221 0 14254 12599 0 1281.8 5297.3 0 10202 10502 0 14105 13920 0 11423 10373 0 14158 14741 0 13474 13129 0 12206 11659 0 13261 12102 0 14185 12389 0 14010 12397 0 1535.3 5270.9 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 64850000 27102000 37748000 0 NaN 4533 952 358 358 1314;3726 1385;3967 1491;4230 1653;4703 1491 1653 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11203 4230 4703 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9874 4230 4703 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9874 Q13428 1270 Q13428 Q13428 Treacle protein TCOF1 sp|Q13428|TCOF_HUMAN Treacle protein OS=Homo sapiens GN=TCOF1 PE=1 SV=3 0.978868 16.7211 0.0037268 94.465 66.723 94.465 1 T MLSPKTGGKEAASGTTPQKSRKPKKGAGNPQ X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPXXXXXXXXXXXX EAASGT(0.021)T(0.979)PQK EAAS(-35.05)GT(-16.72)T(16.72)PQK 7 3 0.48362 23529 0 0 17040 0 0 21354 0 0 19066 0 0 12320 0 0 23592 0 0 15270 0 0 21220 0 0 19062 0 0 2270.8 0 0 22256 0 0 16109 0 0 21522 0 0 19526 0 0 13081 0 0 23420 0 0 15505 0 0 21445 0 0 18648 0 0 2629.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 82241000 82241000 0 0 NaN 4534 953 1270 1270 862 915 992 1098 992 1098 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7344 992 1098 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7344 992 1098 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7344 Q13428 983 Q13428 Q13428 Treacle protein TCOF1 sp|Q13428|TCOF_HUMAN Treacle protein OS=Homo sapiens GN=TCOF1 PE=1 SV=3 0.906873 9.88471 1.03372E-10 177.24 154.77 177.24 1 T PAGPAATPAQAQAASTPRKARASESTARSSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX SPAGPAATPAQAQAAS(0.093)T(0.907)PR S(-144.79)PAGPAAT(-116.78)PAQAQAAS(-9.88)T(9.88)PR 17 3 -0.90119 21839 0 0 20013 0 0 20218 0 0 20816 0 0 36208 0 0 21579 0 0 37650 0 0 28252 0 0 22290 0 0 6126.5 0 0 20659 0 0 18910 0 0 20650 0 0 21336 0 0 35806 0 0 21691 0 0 37834 0 0 28265 0 0 22645 0 0 6422.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 45475000 45475000 0 0 NaN 4535 953 983 983 4074 4344 4634 5147 4634 5147 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8444 4634 5147 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8444 4634 5147 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8444 Q13428 1110 Q13428 Q13428 Treacle protein TCOF1 sp|Q13428|TCOF_HUMAN Treacle protein OS=Homo sapiens GN=TCOF1 PE=1 SV=3 0.613251 2.00893 1.48884E-11 180.86 157.47 180.86 1 T QPSSGVDSAVGTLPATSPQSTSVQAKGTNKL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPXXXXX TQPSSGVDSAVGTLPAT(0.613)S(0.386)PQSTSVQAK T(-118.46)QPS(-111.91)S(-106.37)GVDS(-89.74)AVGT(-50.14)LPAT(2.01)S(-2.01)PQS(-30.98)T(-38.39)S(-43.99)VQAK 17 3 0.059369 5206.4 0 0 11908 0 0 6120.1 0 0 11797 0 0 7848.1 0 0 5774.1 0 0 7943 0 0 9092.9 0 0 13862 0 0 10939 0 0 4930 0 0 11248 0 0 6131.4 0 0 12023 0 0 7869.2 0 0 6118.7 0 0 8242.8 0 0 9321.8 0 0 13426 0 0 10511 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 56307000 56307000 0 0 NaN 4536 953 1110 1110 4878 5203 5543 6161 5543 6161 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15031 5543 6161 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15031 5543 6161 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15031 Q13428 533 Q13428 Q13428 Treacle protein TCOF1 sp|Q13428|TCOF_HUMAN Treacle protein OS=Homo sapiens GN=TCOF1 PE=1 SV=3 0.94086 12.0165 5.28259E-07 152.55 127.62 152.55 1 T GKGAGPVPPGKVGPATPSAQVGKWEEDSESS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX VGPAT(0.941)PS(0.059)AQVGK VGPAT(12.02)PS(-12.02)AQVGK 5 2 -0.13432 18818 0 0 22949 0 0 17112 0 0 23894 0 0 16232 0 0 17112 0 0 17248 0 0 19537 0 0 22262 0 0 9640.6 0 0 17800 0 0 21685 0 0 17320 0 0 24367 0 0 16543 0 0 17504 0 0 17646 0 0 19793 0 0 21753 0 0 9530 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7876000 7876000 0 0 NaN 4537 953 533 533 5118 5455 5810 6461 5810 6461 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11880 5810 6461 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11880 5810 6461 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11880 Q13459 1346 Q13459 Q13459 Unconventional myosin-IXb MYO9B sp|Q13459|MYO9B_HUMAN Unconventional myosin-IXb OS=Homo sapiens GN=MYO9B PE=1 SV=3 0.900546 9.5764 0.000307547 102.57 67.153 102.57 1 T SLDLSDRHRATGAALTPTEERRTSFSTSDVS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPXXXXXXXXXX ATGAALT(0.901)PT(0.099)EER AT(-37.16)GAALT(9.58)PT(-9.58)EER 7 2 -1.3653 27388 0 0 35815 0 0 27767 0 0 33174 0 0 52238 0 0 30687 0 0 56844 0 0 39915 0 0 37466 0 0 9781.8 0 0 25917 0 0 33818 0 0 28246 0 0 34183 0 0 51613 0 0 31004 0 0 57110 0 0 39975 0 0 37790 0 0 10134 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 64320000 64320000 0 0 NaN 4538 958 1346 1346 526 559 599 666 599 666 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9041 599 666 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9041 599 666 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9041 Q13469 325 Q13469 Q13469 Nuclear factor of activated T-cells, cytoplasmic 2 NFATC2 sp|Q13469|NFAC2_HUMAN Nuclear factor of activated T-cells, cytoplasmic 2 OS=Homo sapiens GN=NFATC2 PE=1 SV=2 0.498858 0 0.000143636 120.63 89.399 120.63 T LATDSPCGIPPKMWKTSPDPSPVSAAPSKAG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPXX T(0.499)S(0.499)PDPS(0.002)PVSAAPSK T(0)S(0)PDPS(-23.39)PVS(-71.33)AAPS(-115.09)K 1 3 1.3731 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4539 959 325 325 4928 5253 5596 6219 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11478 5596 6219 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11478 5596 6219 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11478 Q13469 216 Q13469 Q13469 Nuclear factor of activated T-cells, cytoplasmic 2 NFATC2 sp|Q13469|NFAC2_HUMAN Nuclear factor of activated T-cells, cytoplasmic 2 OS=Homo sapiens GN=NFATC2 PE=1 SV=2 0.499918 0 0.0157814 81.263 51.078 81.263 1 T LCPQFQNIPAHYSPRTSPIMSPRTSLAEDSC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX T(0.5)S(0.5)PIMSPR T(0)S(0)PIMS(-34.82)PR 1 2 -0.92149 12774 0 0 23247 0 0 12885 0 0 23555 0 0 14115 0 0 14056 0 0 14839 0 0 17713 0 0 25323 0 0 5259.5 0 0 12088 0 0 21962 0 0 12984 0 0 24014 0 0 14271 0 0 14569 0 0 15357 0 0 17785 0 0 24542 0 0 5362.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12965000 12965000 0 0 NaN 4540 959 216 216 4935 5260 5603 6227 5603 6227 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10825 5603 6227 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10825 5603 6227 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10825 Q13501 269 Q13501 Q13501 Sequestosome-1 SQSTM1 sp|Q13501|SQSTM_HUMAN Sequestosome-1 OS=Homo sapiens GN=SQSTM1 PE=1 SV=1 0.968831 14.9259 4.41925E-08 174.97 142.82 174.97 1 T EVDIDVEHGGKRSRLTPVSPESSSTEEKSSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPXXX S(0.031)RLT(0.969)PVSPESSSTEEK S(-14.93)RLT(14.93)PVS(-53.17)PES(-73.23)S(-75.7)S(-82.29)T(-96.84)EEK 4 3 0.56243 30901 0 0 25900 0 0 33990 0 0 31307 0 0 22564 0 0 28693 0 0 22991 0 0 30751 0 0 33813 0 0 12212 0 0 29252 0 0 24498 0 0 33909 0 0 31773 0 0 23589 0 0 28926 0 0 23679 0 0 31134 0 0 32905 0 0 12211 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 54060000 54060000 0 0 NaN 4541 960 269 269 2633;4266 2780;4545 4844 5376 4844 5376 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10643 4844 5376 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10643 4844 5376 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10643 Q13523 439 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog PRPF4B sp|Q13523|PRP4B_HUMAN Serine/threonine-protein kinase PRP4 homolog OS=Homo sapiens GN=PRPF4B PE=1 SV=3 0.886906 8.94012 0.00218885 97.183 71.841 97.183 2 T RERSKDASPINRWSPTRRRSRSPIRRRSRSP X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPXXXXXXXXXXXXXX DAS(0.999)PINRWS(0.114)PT(0.887)R DAS(30.1)PINRWS(-8.94)PT(8.94)R 11 2 -1.5955 0 16349 0 0 19463 0 0 17930 0 0 20772 0 0 15495 0 0 17274 0 0 15778 0 0 17508 0 0 20746 0 0 11401 0 0 15477 0 0 18393 0 0 17934 0 0 21192 0 0 15877 0 0 17495 0 0 16183 0 0 17896 0 0 20259 0 0 11141 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 43813000 0 43813000 0 NaN 4542 963 439 439 644;3878 686;4132 731 811 731 811 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12790 731 811 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12790 731 811 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12790 Q13541 70 Q13541 Q13541 Eukaryotic translation initiation factor 4E-binding protein 1 EIF4EBP1 sp|Q13541|4EBP1_HUMAN Eukaryotic translation initiation factor 4E-binding protein 1 OS=Homo sapiens GN=EIF4EBP1 PE=1 SV=3 0.980606 17.7954 4.73295E-08 165.13 144.11 75.911 1;2 T DRKFLMECRNSPVTKTPPRDLPTIPGVTSPS X;X;X;X;X;Oxidation (M);X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPPPPPPPP NS(0.003)PVT(0.016)KT(0.981)PPR NS(-25)PVT(-17.8)KT(17.8)PPR 7 3 0.45817 36978 7000.3 0 24636 6844.8 0 36643 7314.5 0 24118 8058.9 0 28269 11503 0 37475 6366.6 0 33362 13311 0 32159 8093.1 0 26233 8169.5 0 15248 4195.3 0 34990 6625.3 0 23270 6472.9 0 36824 7401.9 0 25010 8173.4 0 29247 11447 0 36929 6486.7 0 33520 13322 0 32923 8177.5 0 26187 8279 0 15102 4137.7 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 2 1 0 154520000 132760000 21767000 0 NaN 4543 964 70 70 1290;2932;4833 1360;3108;5158 1463;3328;5497 1623;3689;6115 3328 3689 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8590 5497 6115 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18122 5497 6115 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18122 Q13541 36 Q13541 Q13541 Eukaryotic translation initiation factor 4E-binding protein 1 EIF4EBP1 sp|Q13541|4EBP1_HUMAN Eukaryotic translation initiation factor 4E-binding protein 1 OS=Homo sapiens GN=EIF4EBP1 PE=1 SV=3 0.4945 1.24116 0.00533476 81.098 64.735 81.098 T VVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP RVVLGDGVQLPPGDY(0.006)S(0.125)T(0.495)T(0.374)PGGT(0.042)LFS(0.225)T(0.142)T(0.463)PGGT(0.129)R RVVLGDGVQLPPGDY(-19.18)S(-5.99)T(1.24)T(-1.24)PGGT(-10.61)LFS(-3.14)T(-5.19)T(3.14)PGGT(-5.59)R 17 3 0.35085 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4544 964 36 36 3563;5307 3783;3784;5654;5655 4036 4486 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22273 4036 4486 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22273 4036 4486 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22273 Q13541 37 Q13541 Q13541 Eukaryotic translation initiation factor 4E-binding protein 1 EIF4EBP1 sp|Q13541|4EBP1_HUMAN Eukaryotic translation initiation factor 4E-binding protein 1 OS=Homo sapiens GN=EIF4EBP1 PE=1 SV=3 0.864941 10.8046 1.87536E-05 131.01 113.48 67.409 2 T VLGDGVQLPPGDYSTTPGGTLFSTTPGGTRI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPX RVVLGDGVQLPPGDYS(0.018)T(0.075)T(0.865)PGGT(0.085)LFS(0.086)T(0.203)T(0.531)PGGT(0.137)R RVVLGDGVQLPPGDY(-36)S(-17.14)T(-10.8)T(10.8)PGGT(-10.37)LFS(-8.32)T(-4.18)T(4.18)PGGT(-5.93)R 18 4 -1.3364 0 9455.7 0 0 9172.9 0 0 10543 0 0 9880.7 0 0 9980.1 0 0 9231.2 0 0 7653.9 0 0 13517 0 0 11615 0 0 152700 0 0 8951.6 0 0 8669.4 0 0 10543 0 0 10092 0 0 10132 0 0 9623.2 0 0 8011.2 0 0 17994 0 0 11293 0 0 144100 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 60992000 0 60992000 0 NaN 4545 964 37 37 3563;5307 3783;3784;5654;5655 4035;6030 4484;6702 4035 4484 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22051 6030 6702 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23468 6030 6702 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23468 Q13541 46 Q13541 Q13541 Eukaryotic translation initiation factor 4E-binding protein 1 EIF4EBP1 sp|Q13541|4EBP1_HUMAN Eukaryotic translation initiation factor 4E-binding protein 1 OS=Homo sapiens GN=EIF4EBP1 PE=1 SV=3 0.956437 13.9388 1.87536E-05 131.01 113.48 131.01 1;2 T PGDYSTTPGGTLFSTTPGGTRIIYDRKFLME X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX VVLGDGVQLPPGDY(0.045)S(0.054)T(0.064)T(0.837)PGGTLFS(0.003)T(0.039)T(0.956)PGGT(0.002)R VVLGDGVQLPPGDY(-12.67)S(-11.99)T(-11.2)T(11.2)PGGT(-38.46)LFS(-26.23)T(-13.94)T(13.94)PGGT(-27.67)R 26 3 1.3083 5588.6 9455.7 0 4798.3 9172.9 0 5169 10543 0 6906.9 9880.7 0 7181.5 9980.1 0 7000.3 9231.2 0 5511.4 7653.9 0 6523.8 13517 0 5794.8 11615 0 35308 152700 0 5286.7 8951.6 0 4544.8 8669.4 0 5250.5 10543 0 6964.6 10092 0 7145.6 10132 0 7073.1 9623.2 0 5698.1 8011.2 0 7626.2 17994 0 5705.7 11293 0 33398 144100 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 124410000 63414000 60992000 0 NaN 4546 964 46 46 3563;5307 3783;3784;5654;5655 4035;6029;6030 4484;6701;6702 6030 6702 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23468 6030 6702 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23468 6030 6702 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23468 Q13542 37 Q13542 Q13542 Eukaryotic translation initiation factor 4E-binding protein 2 EIF4EBP2 sp|Q13542|4EBP2_HUMAN Eukaryotic translation initiation factor 4E-binding protein 2 OS=Homo sapiens GN=EIF4EBP2 PE=1 SV=1 0.745477 5.01188 4.75323E-05 119.12 98.859 119.12 2 T VAISDAAQLPHDYCTTPGGTLFSTTPGGTRI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPX TVAISDAAQLPHDYCT(0.253)T(0.745)PGGT(0.038)LFS(0.105)T(0.252)T(0.604)PGGT(0.003)R T(-80.58)VAIS(-66.04)DAAQLPHDY(-35.78)CT(-5.01)T(5.01)PGGT(-13.41)LFS(-7.6)T(-3.8)T(3.8)PGGT(-25.07)R 17 3 -1.1416 0 1616.4 0 0 3088 0 0 1670.4 0 0 2390.5 0 0 1626.6 0 0 1434.3 0 0 1575.3 0 0 2593 0 0 2742.8 0 0 20293 0 0 1529.8 0 0 2913.1 0 0 1678.2 0 0 2481.7 0 0 1653.6 0 0 1533.1 0 0 1637.9 0 0 3167.5 0 0 2656.8 0 0 19169 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 11370000 0 11370000 0 NaN 4547 965 37 37 4996 5325;5326 5674 6304 5674 6304 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19913 5674 6304 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19913 5674 6304 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19913 Q13542 46 Q13542 Q13542 Eukaryotic translation initiation factor 4E-binding protein 2 EIF4EBP2 sp|Q13542|4EBP2_HUMAN Eukaryotic translation initiation factor 4E-binding protein 2 OS=Homo sapiens GN=EIF4EBP2 PE=1 SV=1 0.603818 3.7993 5.48945E-12 198.49 182 119.12 1;2 T PHDYCTTPGGTLFSTTPGGTRIIYDRKFLLD X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX TVAISDAAQLPHDYCT(0.253)T(0.745)PGGT(0.038)LFS(0.105)T(0.252)T(0.604)PGGT(0.003)R T(-80.58)VAIS(-66.04)DAAQLPHDY(-35.78)CT(-5.01)T(5.01)PGGT(-13.41)LFS(-7.6)T(-3.8)T(3.8)PGGT(-25.07)R 26 3 -1.1416 2867.6 1616.4 0 7839.8 3088 0 3673.9 1670.4 0 7162.2 2390.5 0 3746.3 1626.6 0 2483.9 1434.3 0 4932.1 1575.3 0 5273.2 2593 0 8143.6 2742.8 0 15859 20293 0 2716.5 1529.8 0 7402.1 2913.1 0 3656.1 1678.2 0 7320.1 2481.7 0 3817.3 1653.6 0 2763.4 1533.1 0 5051.5 1637.9 0 5659.2 3167.5 0 7899.1 2656.8 0 15055 19169 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 98226000 86856000 11370000 0 NaN 4548 965 46 46 4996 5325;5326 5674;5675 6304;6305 5674 6304 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19913 5675 6305 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20087 5675 6305 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20087 Q13595 202 Q13595 Q13595 Transformer-2 protein homolog alpha TRA2A sp|Q13595|TRA2A_HUMAN Transformer-2 protein homolog alpha OS=Homo sapiens GN=TRA2A PE=1 SV=1 0.996141 24.1186 9.43235E-11 185.32 145.26 185.32 1 T GRRIRVDYSITKRAHTPTPGIYMGRPTHSGG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX AHT(0.996)PT(0.004)PGIYMGR AHT(24.12)PT(-24.12)PGIY(-146.14)MGR 3 3 0.29634 32389 0 0 36808 0 0 28959 0 0 31686 0 0 30051 0 0 33454 0 0 28844 0 0 33275 0 0 35581 0 0 13089 0 0 30636 0 0 34742 0 0 29368 0 0 32875 0 0 30421 0 0 33476 0 0 29603 0 0 33778 0 0 34822 0 0 13095 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 468220000 468220000 0 0 NaN 4549 970 202 202 245;246 261;262;263 279;280 310;311 280 311 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11591 280 311 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11591 280 311 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11591 Q13595 204 Q13595 Q13595 Transformer-2 protein homolog alpha TRA2A sp|Q13595|TRA2A_HUMAN Transformer-2 protein homolog alpha OS=Homo sapiens GN=TRA2A PE=1 SV=1 0.576482 1.34765 0.00525746 79.731 71.738 79.731 1 T RIRVDYSITKRAHTPTPGIYMGRPTHSGGGG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP AHT(0.423)PT(0.576)PGIY(0.001)MGRPTHSGGGGGGGGGGGGGGGGR AHT(-1.35)PT(1.35)PGIY(-28.5)MGRPT(-46.44)HS(-57.15)GGGGGGGGGGGGGGGGR 5 4 0.35189 6455 0 0 5517.5 0 0 5962.3 0 0 5723.4 0 0 7724.3 0 0 6610.2 0 0 6679.5 0 0 6879.7 0 0 7221.6 0 0 6139.1 0 0 6106.3 0 0 5213.4 0 0 6051.6 0 0 5878.3 0 0 7720.3 0 0 6601.1 0 0 6864.2 0 0 7075.3 0 0 7102.6 0 0 5939.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12608000 12608000 0 0 NaN 4550 970 204 204 245;246 261;262;263 281 312 281 312 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8340 281 312 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8340 281 312 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8340 Q13620 49 Q13620 Q13620 Cullin-4B CUL4B sp|Q13620|CUL4B_HUMAN Cullin-4B OS=Homo sapiens GN=CUL4B PE=1 SV=4 0.98094 17.2312 9.73969E-05 121.26 103.77 121.26 1 T AAQEVRSATDGNTSTTPPTSAKKRKLNSSSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPXXXXXXXXX SATDGNTST(0.019)T(0.981)PPTSAK S(-65.87)AT(-66.25)DGNT(-45.71)S(-33.77)T(-17.23)T(17.23)PPT(-42.46)S(-50.84)AK 10 3 -0.021033 13977 0 0 16543 0 0 13304 0 0 18053 0 0 13717 0 0 12942 0 0 13086 0 0 15496 0 0 20549 0 0 2939.5 0 0 13223 0 0 15636 0 0 13439 0 0 18362 0 0 13893 0 0 13238 0 0 13555 0 0 15533 0 0 19959 0 0 3126.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26288000 26288000 0 0 NaN 4551 975 49 49 3632 3861 4114 4571 4114 4571 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8190 4114 4571 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8190 4114 4571 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8190 Q14004 1147 Q14004 Q14004 Cyclin-dependent kinase 13 CDK13 sp|Q14004|CDK13_HUMAN Cyclin-dependent kinase 13 OS=Homo sapiens GN=CDK13 PE=1 SV=2 0.862259 8.18386 2.54316E-08 171.48 146.64 171.48 1 T PAGILATGEKQTDPSTPQQESSKPLGGIQPS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP QT(0.002)DPS(0.131)T(0.862)PQQES(0.002)S(0.002)KPLGGIQPSSQTIQPK QT(-26.32)DPS(-8.18)T(8.18)PQQES(-25.61)S(-25.61)KPLGGIQPS(-117.92)S(-131.27)QT(-140.42)IQPK 6 4 -0.15494 9228.2 0 0 7802.5 0 0 10211 0 0 7261.7 0 0 6705.3 0 0 11336 0 0 7055.5 0 0 9402.1 0 0 8947.5 0 0 20818 0 0 8736 0 0 7367.7 0 0 10183 0 0 7554.5 0 0 7018.3 0 0 11196 0 0 7216.9 0 0 10133 0 0 8748.2 0 0 19821 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22062000 22062000 0 0 NaN 4552 984 1147 1147 3153 3345 3576 3966 3576 3966 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14836 3576 3966 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14836 3576 3966 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14836 Q14202 817 Q14202 Q14202 Zinc finger MYM-type protein 3 ZMYM3 sp|Q14202|ZMYM3_HUMAN Zinc finger MYM-type protein 3 OS=Homo sapiens GN=ZMYM3 PE=1 SV=2 0.988151 19.4202 0.00623686 90.729 72.417 90.729 1 T LGKIPVKTRSAPTAPTPPPPPPPATPRKNKA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPXXXX S(0.001)APT(0.011)APT(0.988)PPPPPPPATPR S(-32.92)APT(-19.42)APT(19.42)PPPPPPPAT(-42.8)PR 7 3 -0.21541 20686 0 0 24450 0 0 20876 0 0 24499 0 0 23852 0 0 24273 0 0 25600 0 0 24099 0 0 24413 0 0 13783 0 0 19575 0 0 23097 0 0 21050 0 0 25148 0 0 24053 0 0 24364 0 0 25942 0 0 24595 0 0 24139 0 0 13536 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 34369000 34369000 0 0 NaN 4553 1000 817 817 3595 3822 4075 4530;4531 4075 4531 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11290 4075 4531 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11290 4075 4531 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11290 Q14202 462 Q14202 Q14202 Zinc finger MYM-type protein 3 ZMYM3 sp|Q14202|ZMYM3_HUMAN Zinc finger MYM-type protein 3 OS=Homo sapiens GN=ZMYM3 PE=1 SV=2 0.580581 1.41215 1.03405E-10 197.72 178.06 197.72 1 T KTNCCDQCGAYIYTKTGSPGPELLFHEGQQK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP T(0.581)GS(0.419)PGPELLFHEGQQK T(1.41)GS(-1.41)PGPELLFHEGQQK 1 3 0.24726 14156 0 0 18640 0 0 12622 0 0 15991 0 0 13250 0 0 13913 0 0 13748 0 0 16515 0 0 17288 0 0 17933 0 0 13389 0 0 17594 0 0 12806 0 0 16547 0 0 13419 0 0 14105 0 0 14067 0 0 17005 0 0 16908 0 0 17268 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 79457000 79457000 0 0 NaN 4554 1000 462 462 4732 5046 5377 5980 5377 5980 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17127 5377 5980 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17127 5377 5980 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17127 Q14204 4369 Q14204 Q14204 Cytoplasmic dynein 1 heavy chain 1 DYNC1H1 sp|Q14204|DYHC1_HUMAN Cytoplasmic dynein 1 heavy chain 1 OS=Homo sapiens GN=DYNC1H1 PE=1 SV=5 0.493654 0 8.95831E-07 142.08 111.47 142.08 T DLAYAETEKKTRTDSTSDGRPAWMRTLHTTA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TDS(0.494)T(0.494)S(0.013)DGRPAWMR T(-43.91)DS(0)T(0)S(-15.91)DGRPAWMR 4 2 3.7272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4555 1001 4369 4369 4670 4981 5305 5894 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12593 5305 5894 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12593 5305 5894 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12593 Q14247 399 Q14247 Q14247 Src substrate cortactin CTTN sp|Q14247|SRC8_HUMAN Src substrate cortactin OS=Homo sapiens GN=CTTN PE=1 SV=2 0.635118 2.40795 8.92183E-05 120.75 112.15 120.75 2 T QEEARRKLEEQARAKTQTPPVSPAPQPTEER X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP AKT(0.635)QT(0.365)PPVS(0.998)PAPQPT(0.002)EER AKT(2.41)QT(-2.41)PPVS(27.63)PAPQPT(-27.63)EER 3 3 0.30547 0 10324 0 0 25704 0 0 10761 0 0 25069 0 0 6449.9 0 0 10658 0 0 5596.9 0 0 16591 0 0 29308 0 0 5488.8 0 0 9771.2 0 0 24278 0 0 10756 0 0 25547 0 0 6810.3 0 0 11411 0 0 6387.5 0 0 16577 0 0 27912 0 0 5552.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 40494000 0 40494000 0 NaN 4556 1004 399 399 281;4889;4890 302;5214;5215 323 361 323 361 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9313 323 361 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9313 323 361 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9313 Q14247 401 Q14247 Q14247 Src substrate cortactin CTTN sp|Q14247|SRC8_HUMAN Src substrate cortactin OS=Homo sapiens GN=CTTN PE=1 SV=2 0.732076 4.36629 7.57282E-05 125.17 101.34 125.17 1 T EARRKLEEQARAKTQTPPVSPAPQPTEERLP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX T(0.268)QT(0.732)PPVSPAPQPTEER T(-4.37)QT(4.37)PPVS(-41.45)PAPQPT(-97.46)EER 3 3 1.5257 8863.4 0 0 12568 0 0 10220 0 0 10643 0 0 12616 0 0 9816.8 0 0 11517 0 0 12048 0 0 12665 0 0 4477.2 0 0 8392.1 0 0 11862 0 0 10240 0 0 11032 0 0 12646 0 0 9913.2 0 0 11807 0 0 12133 0 0 12448 0 0 4494.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 36684000 36684000 0 0 NaN 4557 1004 401 401 281;4889;4890 302;5214;5215 5554 6174 5554 6174 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9637 5554 6174 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9637 5554 6174 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9637 Q14676 1425 Q14676 Q14676 Mediator of DNA damage checkpoint protein 1 MDC1 sp|Q14676|MDC1_HUMAN Mediator of DNA damage checkpoint protein 1 OS=Homo sapiens GN=MDC1 PE=1 SV=3 0.999503 38.5194 6.76561E-05 115.58 98.434 115.58 1 T TAPKLEPSTSTDQPVTPEPTSQATRGRTNRS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPPPXXXXXX LEPSTSTDQPVT(1)PEPTSQATR LEPS(-44.51)T(-38.52)S(-38.52)T(-38.52)DQPVT(38.52)PEPT(-45.47)S(-50.46)QAT(-55.48)R 12 3 -0.0017794 8507.5 0 0 7839.9 0 0 7551.5 0 0 9337.3 0 0 7020.9 0 0 7711.3 0 0 6357.9 0 0 7235.7 0 0 9610.5 0 0 11422 0 0 8046.7 0 0 7414.7 0 0 7651.1 0 0 9469.7 0 0 7149.9 0 0 7817.5 0 0 6592.7 0 0 7620.5 0 0 9344.8 0 0 10923 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15159000 15159000 0 0 NaN 4558 1016 1425 1425 2335 2468 2657 2969 2657 2969 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11950 2657 2969 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11950 2657 2969 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11950 Q14676 1403 Q14676 Q14676 Mediator of DNA damage checkpoint protein 1 MDC1 sp|Q14676|MDC1_HUMAN Mediator of DNA damage checkpoint protein 1 OS=Homo sapiens GN=MDC1 PE=1 SV=3 0.410954 1.47516 9.95441E-05 109.05 88.397 109.05 T TSRATRGRKNRSSGKTPETLVPTAPKLEPST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPXXXXX NRS(0.293)S(0.293)GKT(0.411)PET(0.004)LVPTAPK NRS(-1.48)S(-1.48)GKT(1.48)PET(-20.29)LVPT(-65.75)APK 7 4 -1.0034 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4559 1016 1403 1403 2907;4347 3081;4633 3299 3658 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13390 3299 3658 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13390 3299 3658 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13390 Q14676 1567 Q14676 Q14676 Mediator of DNA damage checkpoint protein 1 MDC1 sp|Q14676|MDC1_HUMAN Mediator of DNA damage checkpoint protein 1 OS=Homo sapiens GN=MDC1 PE=1 SV=3 0.849677 10.5952 0.00053731 100.98 79.181 100.98 1 T TSRATRGRTNRSSVKTPESIVPIAPELQPST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP S(0.074)S(0.074)VKT(0.85)PES(0.002)IVPIAPELQPSTSR S(-10.6)S(-10.6)VKT(10.6)PES(-25.97)IVPIAPELQPS(-85.48)T(-85.48)S(-85.48)R 5 3 0.0083745 9835.7 0 0 9840.4 0 0 9728.6 0 0 9920.9 0 0 8595.1 0 0 9313.3 0 0 8790.2 0 0 8999 0 0 9516.8 0 0 17559 0 0 9306.7 0 0 9296.3 0 0 9788.8 0 0 10172 0 0 8792.7 0 0 9391.5 0 0 8958.2 0 0 9567.9 0 0 9359.4 0 0 16742 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20756000 20756000 0 0 NaN 4560 1016 1567 1567 4490 4782 5092 5651 5092 5651 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19343 5092 5651 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19343 5092 5651 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19343 Q14679 344 Q14679 Q14679 Tubulin polyglutamylase TTLL4 TTLL4 sp|Q14679|TTLL4_HUMAN Tubulin polyglutamylase TTLL4 OS=Homo sapiens GN=TTLL4 PE=1 SV=2 1 56.9514 0.0455693 56.951 26.893 56.951 1 T DPTKEIRFTEAVRKLTARGFEKMPRQGCQLE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPXXXXXX LT(1)ARGFEKMPR LT(56.95)ARGFEKMPR 2 3 -4.173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4561 1018 344 344 2612 2759 2959 3296 2959 3296 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17409 2959 3296 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17409 2959 3296 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17409 Q14686 1890 Q14686 Q14686 Nuclear receptor coactivator 6 NCOA6 sp|Q14686|NCOA6_HUMAN Nuclear receptor coactivator 6 OS=Homo sapiens GN=NCOA6 PE=1 SV=3 0.367108 0.452724 0.0373077 58.434 43.82 58.434 T DSKTPTPPAPTLLKMTSSPVGPGTASAGPSL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP MT(0.367)S(0.331)S(0.298)PVGPGT(0.003)AS(0.001)AGPSLPGGALPTSVR MT(0.45)S(-0.45)S(-0.9)PVGPGT(-21.09)AS(-26.27)AGPS(-36.04)LPGGALPT(-56.07)S(-56.07)VR 2 3 0.58009 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4562 1021 1890 1890 2757 2925 3135 3483 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18715 3135 3483 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18715 3135 3483 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18715 Q14978 188 Q14978 Q14978 Nucleolar and coiled-body phosphoprotein 1 NOLC1 sp|Q14978|NOLC1_HUMAN Nucleolar and coiled-body phosphoprotein 1 OS=Homo sapiens GN=NOLC1 PE=1 SV=2 0.997964 26.9038 0.0280157 66.962 17.426 66.962 1 T SSSEDEPPKNQKPKITPVTVKAQTKAPPKPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPXXXXXXXXXX IT(0.998)PVT(0.002)VK IT(26.9)PVT(-26.9)VK 2 2 -2.0942 14531 0 0 28604 0 0 14213 0 0 33179 0 0 23638 0 0 15598 0 0 21298 0 0 22580 0 0 32055 0 0 5280.8 0 0 13749 0 0 27048 0 0 14441 0 0 33505 0 0 23408 0 0 16517 0 0 22087 0 0 22538 0 0 31172 0 0 5495.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24132000 24132000 0 0 NaN 4563 1035 188 188 1968 2080 2244 2506 2244 2506 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15269 2244 2506 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15269 2244 2506 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15269 Q14978 607 Q14978 Q14978 Nucleolar and coiled-body phosphoprotein 1 NOLC1 sp|Q14978|NOLC1_HUMAN Nucleolar and coiled-body phosphoprotein 1 OS=Homo sapiens GN=NOLC1 PE=1 SV=2 0.995253 23.215 0.000544503 115.15 55.726 115.15 1 T AKEAETPQAKKIKLQTPNTFPKRKKGEKRAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX LQT(0.995)PNT(0.005)FPK LQT(23.22)PNT(-23.22)FPK 3 2 1.0372 19562 0 0 34041 0 0 20670 0 0 32739 0 0 24505 0 0 22304 0 0 25927 0 0 25513 0 0 35436 0 0 26205 0 0 18515 0 0 32150 0 0 20800 0 0 33527 0 0 24670 0 0 22912 0 0 26583 0 0 26257 0 0 34561 0 0 25266 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20200000 20200000 0 0 NaN 4564 1035 607 607 2531 2674 2870 3202 2870 3202 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15993 2870 3202 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15993 2870 3202 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15993 Q14C86 762 Q14C86 Q14C86 GTPase-activating protein and VPS9 domain-containing protein 1 GAPVD1 sp|Q14C86|GAPD1_HUMAN GTPase-activating protein and VPS9 domain-containing protein 1 OS=Homo sapiens GN=GAPVD1 PE=1 SV=2 0.959173 13.7237 1.3177E-34 295.65 278.84 295.65 1;2 T TSDDTDVREVSSRPSTPGLSVVSGISATSED X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPPP EVSSRPS(0.041)T(0.959)PGLSVVSGISATSEDIPNKIEDLR EVS(-42.86)S(-40.65)RPS(-13.72)T(13.72)PGLS(-60.38)VVS(-115.87)GIS(-159.86)AT(-177.42)S(-183.87)EDIPNKIEDLR 8 4 0.20289 4454.6 4677.9 0 9335.3 5947.1 0 3554.5 5426.4 0 10020 5327 0 8330.3 4344.9 0 4988.1 4233.6 0 9633.1 1895.9 0 8548.2 6767.5 0 11633 7115.9 0 18358 117990 0 4211.8 4429.3 0 8822.7 5614.4 0 3691.9 5403.2 0 10166 5489.9 0 8191.9 4443.3 0 5303.7 4546.4 0 9797.8 2190.4 0 8989.7 10245 0 11394 6799.9 0 17484 111260 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1018000000 33659000 984360000 0 NaN 4565 1038 762 762 1223 1286;1287 1385;1387 1536;1538 1385 1536 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22301 1385 1536 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22301 1385 1536 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22301 Q15149 4030 Q15149 Q15149 Plectin PLEC sp|Q15149|PLEC_HUMAN Plectin OS=Homo sapiens GN=PLEC PE=1 SV=3 1 93.5098 0.00915281 93.51 67.151 93.51 1 T SDARKLTFRGLRKQITMEELVRSQVMDEATA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX KQIT(1)MEELVR KQIT(93.51)MEELVR 4 3 -0.062131 12517 0 0 10155 0 0 12578 0 0 11453 0 0 6232.5 0 0 12162 0 0 7112.9 0 0 10567 0 0 12910 0 0 4753.1 0 0 11844 0 0 9600.7 0 0 12586 0 0 11691 0 0 6717.4 0 0 12148 0 0 7356.8 0 0 10804 0 0 12493 0 0 4720.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14176000 14176000 0 0 NaN 4566 1061 4030 4030 2178 2301 2477 2757 2477 2757 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16604 2477 2757 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16604 2477 2757 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16604 Q15233 450 Q15233 Q15233 Non-POU domain-containing octamer-binding protein NONO sp|Q15233|NONO_HUMAN Non-POU domain-containing octamer-binding protein OS=Homo sapiens GN=NONO PE=1 SV=4 1 89.3097 8.78105E-12 194.66 174.92 194.66 1 T FGQAATMEGIGAIGGTPPAFNRAAPGAEFAP X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPXXXXXXXXX FGQAATMEGIGAIGGT(1)PPAFNR FGQAAT(-89.31)MEGIGAIGGT(89.31)PPAFNR 16 3 -0.8836 15461 0 0 18284 0 0 15545 0 0 21990 0 0 12713 0 0 15325 0 0 19575 0 0 17873 0 0 22114 0 0 30410 0 0 14631 0 0 17293 0 0 15627 0 0 22246 0 0 13168 0 0 15748 0 0 19665 0 0 18745 0 0 21712 0 0 29049 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 299200000 299200000 0 0 NaN 4567 1065 450 450 1266 1332;1333 1434;1435 1591;1592 1435 1592 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21766 1435 1592 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21766 1435 1592 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21766 Q15233 428 Q15233 Q15233 Non-POU domain-containing octamer-binding protein NONO sp|Q15233|NONO_HUMAN Non-POU domain-containing octamer-binding protein OS=Homo sapiens GN=NONO PE=1 SV=4 0.87875 10.6465 2.65487E-05 103.99 87.538 103.99 1 T PPGPATMMPDGTLGLTPPTTERFGQAATMEG X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X PPPPPPPPPPPPPPPPPPPPPPXXXXXXXXX GAMPPAPVPAGTPAPPGPAT(0.001)MMPDGT(0.004)LGLT(0.879)PPT(0.052)T(0.065)ER GAMPPAPVPAGT(-52.49)PAPPGPAT(-32.92)MMPDGT(-24.34)LGLT(10.65)PPT(-11.68)T(-10.65)ER 30 4 0.75169 4543.7 0 0 4871.3 0 0 4385.6 0 0 5090.2 0 0 5592.1 0 0 4322.8 0 0 4528.4 0 0 6066.3 0 0 5325.3 0 0 44002 0 0 4298.9 0 0 4603 0 0 4437.9 0 0 5200.8 0 0 5589.3 0 0 4471.9 0 0 4682.4 0 0 7343.3 0 0 5220.7 0 0 41573 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 28686000 28686000 0 0 NaN 4568 1065 428 428 1366 1440;1441 1548;1549 1711;1712 1548 1711 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20719 1548 1711 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20719 1548 1711 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20719 Q15233 15 Q15233 Q15233 Non-POU domain-containing octamer-binding protein NONO sp|Q15233|NONO_HUMAN Non-POU domain-containing octamer-binding protein OS=Homo sapiens GN=NONO PE=1 SV=4 1 67.9926 0.0449316 67.993 37.738 67.993 1 T _MQSNKTFNLEKQNHTPRKHHQHHHQQQHHQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX QNHT(1)PRK QNHT(67.99)PRK 4 3 -0.55197 14962 0 0 3314.5 0 0 14787 0 0 2533.6 0 0 2889 0 0 13327 0 0 2548.7 0 0 7398.7 0 0 3451.4 0 0 4355.9 0 0 14157 0 0 3126.7 0 0 14754 0 0 2822.5 0 0 3630.4 0 0 12810 0 0 2635.5 0 0 7782.4 0 0 3367.2 0 0 4272.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7647800 7647800 0 0 NaN 4569 1065 15 15 3089 3277 3506 3886 3506 3886 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4970 3506 3886 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4970 3506 3886 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4970 Q15287 49 Q15287 Q15287 RNA-binding protein with serine-rich domain 1 RNPS1 sp|Q15287|RNPS1_HUMAN RNA-binding protein with serine-rich domain 1 OS=Homo sapiens GN=RNPS1 PE=1 SV=1 0.58375 1.84024 0.0423816 48.14 19.843 48.14 1 T RSDEKSKDRSKDKGATKESSEKDRGRDKTRK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX GAT(0.584)KES(0.382)S(0.034)EKDR GAT(1.84)KES(-1.84)S(-12.33)EKDR 3 4 -0.022224 13401 0 0 9389.5 0 0 13469 0 0 8742.2 0 0 12277 0 0 13794 0 0 12372 0 0 12808 0 0 8902.8 0 0 2502.8 0 0 12681 0 0 8866.2 0 0 13544 0 0 9096.9 0 0 12527 0 0 13593 0 0 12494 0 0 12961 0 0 8931.6 0 0 2653.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24593000 24593000 0 0 NaN 4570 1067 49 49 1375 1450 1558 1722 1558 1722 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5956 1558 1722 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5956 1558 1722 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5956 Q15287 161 Q15287 Q15287 RNA-binding protein with serine-rich domain 1 RNPS1 sp|Q15287|RNPS1_HUMAN RNA-binding protein with serine-rich domain 1 OS=Homo sapiens GN=RNPS1 PE=1 SV=1 0.987432 18.9478 0.00448348 94.767 78.135 94.767 2 T RDEKERKRRSPSPKPTKVHIGRLTRNVTKDH X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPXXXXXXXXXXXXXX S(0.999)PS(0.014)PKPT(0.987)K S(29.95)PS(-18.95)PKPT(18.95)K 7 2 0.24045 0 15778 0 0 17792 0 0 15869 0 0 17817 0 0 16876 0 0 16810 0 0 18064 0 0 17203 0 0 19383 0 0 4528 0 0 14930 0 0 16807 0 0 15988 0 0 18276 0 0 17085 0 0 16908 0 0 18367 0 0 17378 0 0 19069 0 0 4661.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 37124000 0 37124000 0 NaN 4571 1067 161 161 3484;4187 3701;4462 4756 5277 4756 5277 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8541 4756 5277 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8541 4756 5277 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8541 Q15311 27 Q15311 Q15311 RalA-binding protein 1 RALBP1 sp|Q15311|RBP1_HUMAN RalA-binding protein 1 OS=Homo sapiens GN=RALBP1 PE=1 SV=3 0.641423 3.68203 3.44638E-11 209.23 184.64 209.23 1 T PSEHRRVEHGSGLTRTPSSEEISPTKFPGLY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP T(0.641)PS(0.275)S(0.084)EEISPTKFPGLYR T(3.68)PS(-3.68)S(-8.84)EEIS(-62.55)PT(-101.11)KFPGLY(-175.14)R 1 3 0.47867 18751 0 0 19215 0 0 21888 0 0 18472 0 0 14341 0 0 21849 0 0 19923 0 0 21963 0 0 19801 0 0 14442 0 0 17755 0 0 18148 0 0 21777 0 0 19066 0 0 15078 0 0 21778 0 0 20008 0 0 22461 0 0 19542 0 0 14107 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 51960000 51960000 0 0 NaN 4572 1069 27 27 4856;4857 5181;5182 5521 6139 5521 6139 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18678 5521 6139 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18678 5521 6139 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18678 Q15418 733 Q15418 Q15418 Ribosomal protein S6 kinase alpha-1 RPS6KA1 sp|Q15418|KS6A1_HUMAN Ribosomal protein S6 kinase alpha-1 OS=Homo sapiens GN=RPS6KA1 PE=1 SV=2 0.782991 6.77767 0.0192102 86.67 71.588 86.67 1 T ESSILAQRRVRKLPSTTL_____________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX KLPS(0.053)T(0.783)T(0.164)L KLPS(-11.73)T(6.78)T(-6.78)L 5 2 -0.39434 65044 0 0 28973 0 0 63917 0 0 27764 0 0 37012 0 0 57722 0 0 39949 0 0 46138 0 0 27908 0 0 5132.6 0 0 61544 0 0 27363 0 0 64102 0 0 29062 0 0 39178 0 0 56385 0 0 40194 0 0 46883 0 0 28047 0 0 5900.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 261250000 261250000 0 0 NaN 4573 1075 733 733 2122 2243 2416 2693 2416 2693 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16028 2416 2693 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16028 2416 2693 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16028 Q15648 1215 Q15648 Q15648 Mediator of RNA polymerase II transcription subunit 1 MED1 sp|Q15648|MED1_HUMAN Mediator of RNA polymerase II transcription subunit 1 OS=Homo sapiens GN=MED1 PE=1 SV=4 0.880468 9.58046 0.000320902 103.31 75.975 103.31 1 T GGSDKLASPMKPVPGTPPSSKAKSPISSGSG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPXXXXXXXXXX LAS(0.004)PMKPVPGT(0.88)PPS(0.097)S(0.019)K LAS(-23.8)PMKPVPGT(9.58)PPS(-9.58)S(-16.69)K 11 3 0.41132 14338 0 0 12124 0 0 17319 0 0 12328 0 0 16564 0 0 13998 0 0 16012 0 0 17071 0 0 12017 0 0 11132 0 0 13578 0 0 11454 0 0 17258 0 0 12672 0 0 16843 0 0 14016 0 0 16216 0 0 17340 0 0 12027 0 0 10877 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20976000 20976000 0 0 NaN 4574 1084 1215 1215 2295 2424 2609 2915 2609 2915 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15560 2609 2915 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15560 2609 2915 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15560 Q15648 805 Q15648 Q15648 Mediator of RNA polymerase II transcription subunit 1 MED1 sp|Q15648|MED1_HUMAN Mediator of RNA polymerase II transcription subunit 1 OS=Homo sapiens GN=MED1 PE=1 SV=4 1 92.408 2.31891E-10 186.94 158.66 186.94 1 T ASKLPSTSDDCPAIGTPLRDSSSSGHSQSTL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPXXXXXXXXXXXX LPSTSDDCPAIGT(1)PLR LPS(-125.28)T(-105.24)S(-92.41)DDCPAIGT(92.41)PLR 13 2 1.5563 6727.9 0 0 5802.1 0 0 6490.6 0 0 6452.2 0 0 5868.7 0 0 6936.2 0 0 5206.2 0 0 7307.5 0 0 6995.2 0 0 19824 0 0 6365.4 0 0 5484.7 0 0 6540.5 0 0 6593 0 0 5984.6 0 0 6972.9 0 0 5380.3 0 0 7912.9 0 0 6826.3 0 0 18836 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14416000 14416000 0 0 NaN 4575 1084 805 805 2513 2654 2850 3179 2850 3179 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16598 2850 3179 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16598 2850 3179 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16598 Q15648 1051 Q15648 Q15648 Mediator of RNA polymerase II transcription subunit 1 MED1 sp|Q15648|MED1_HUMAN Mediator of RNA polymerase II transcription subunit 1 OS=Homo sapiens GN=MED1 PE=1 SV=4 0.724423 4.19757 9.49429E-05 126.81 107.98 126.81 1 T STGGSKSPGSAGRSQTPPGVATPPIPKITIQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX S(0.276)QT(0.724)PPGVATPPIPK S(-4.2)QT(4.2)PPGVAT(-51.57)PPIPK 3 3 -0.14353 9014.4 0 0 8248 0 0 8619.5 0 0 9255.7 0 0 9753.5 0 0 9312.3 0 0 9143.2 0 0 8613.2 0 0 8466 0 0 5027.9 0 0 8528.5 0 0 7797.3 0 0 8714.8 0 0 9442.9 0 0 9821.6 0 0 9332.4 0 0 9317.8 0 0 8818.2 0 0 8382.1 0 0 4933.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 142310000 142310000 0 0 NaN 4576 1084 1051 1051 4258 4537 4836 5367 4836 5367 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16098 4836 5367 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16098 4836 5367 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16098 Q15652 505 Q15652 Q15652 Probable JmjC domain-containing histone demethylation protein 2C JMJD1C sp|Q15652|JHD2C_HUMAN Probable JmjC domain-containing histone demethylation protein 2C OS=Homo sapiens GN=JMJD1C PE=1 SV=2 0.993632 21.932 0.0520406 57.136 30.622 57.136 1 T TMELLPKEKFVSRPPTPKCVIDITNDTNLEK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX FVS(0.006)RPPT(0.994)PK FVS(-21.93)RPPT(21.93)PK 7 3 -0.08124 26638 0 0 12524 0 0 29084 0 0 10805 0 0 7974.2 0 0 25190 0 0 7310.4 0 0 17153 0 0 12816 0 0 1621.9 0 0 25216 0 0 11821 0 0 28885 0 0 11431 0 0 9334.4 0 0 24509 0 0 7624 0 0 17566 0 0 12412 0 0 1924.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 63187000 63187000 0 0 NaN 4577 1086 505 505 1344 1417 1524 1687 1524 1687 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12407 1524 1687 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12407 1524 1687 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12407 Q15652 2052 Q15652 Q15652 Probable JmjC domain-containing histone demethylation protein 2C JMJD1C sp|Q15652|JHD2C_HUMAN Probable JmjC domain-containing histone demethylation protein 2C OS=Homo sapiens GN=JMJD1C PE=1 SV=2 0.458409 0 8.84445E-07 141.55 109.48 141.55 T KEEREQDNSESPNGRTSPLVSQNNEQGSTLR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP T(0.458)S(0.458)PLVS(0.083)QNNEQGSTLR T(0)S(0)PLVS(-7.41)QNNEQGS(-119.92)T(-122.68)LR 1 3 0.72302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4578 1086 2052 2052 4939 5264 5607 6231 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11694 5607 6231 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11694 5607 6231 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11694 Q15758 494 Q15758 Q15758 Neutral amino acid transporter B(0) SLC1A5 sp|Q15758|AAAT_HUMAN Neutral amino acid transporter B(0) OS=Homo sapiens GN=SLC1A5 PE=1 SV=2 0.617695 2.08364 2.70144E-06 149.41 114 149.41 1 T AGLLQNYVDRTESRSTEPELIQVKSELPLDP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPXXXXXXX S(0.382)T(0.618)EPELIQVK S(-2.08)T(2.08)EPELIQVK 2 3 -0.15802 7327.6 0 0 10310 0 0 8245.8 0 0 9983.1 0 0 5100 0 0 7155.2 0 0 5348.2 0 0 9099 0 0 9756.6 0 0 2428.4 0 0 6937.2 0 0 9738 0 0 8212.2 0 0 10225 0 0 5368.9 0 0 7327.2 0 0 5552.8 0 0 9124.8 0 0 9439.9 0 0 2497.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18193000 18193000 0 0 NaN 4579 1093 494 494 4501 4794 5106 5670 5106 5670 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17480 5106 5670 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17480 5106 5670 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17480 Q15910 487 Q15910 Q15910 Histone-lysine N-methyltransferase EZH2 EZH2 sp|Q15910|EZH2_HUMAN Histone-lysine N-methyltransferase EZH2 OS=Homo sapiens GN=EZH2 PE=1 SV=2 1 110.573 3.44184E-08 172.95 159.5 129.74 1 T KESSIIAPAPAEDVDTPPRKKKRKHRLWAAH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX ESSIIAPAPAEDVDT(1)PPR ES(-110.57)S(-110.98)IIAPAPAEDVDT(110.57)PPR 15 3 -1.6691 14096 0 0 13062 0 0 14438 0 0 15046 0 0 14841 0 0 14546 0 0 15591 0 0 15348 0 0 16326 0 0 21133 0 0 13340 0 0 12350 0 0 14525 0 0 15320 0 0 15048 0 0 14652 0 0 15854 0 0 16001 0 0 16078 0 0 20255 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 36954000 36954000 0 0 NaN 4580 1098 487 487 1166;5144 1227;5481 1324;5838 1463;6490 1324 1463 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15500 5838 6490 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15528 5838 6490 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15528 Q15910 367 Q15910 Q15910 Histone-lysine N-methyltransferase EZH2 EZH2 sp|Q15910|EZH2_HUMAN Histone-lysine N-methyltransferase EZH2 OS=Homo sapiens GN=EZH2 PE=1 SV=2 0.832672 7.15564 2.40657E-11 181.03 145.33 131.26 1;2 T GRRRGRLPNNSSRPSTPTINVLESKDTDSDR X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPPPXXXXXX LPNNS(0.003)S(0.002)RPS(0.16)T(0.833)PT(0.002)INVLESK LPNNS(-24.27)S(-26.02)RPS(-7.16)T(7.16)PT(-26.56)INVLES(-78.47)K 10 3 0.46489 14873 26394 0 17791 17902 0 13777 25271 0 16303 17410 0 14936 23743 0 15291 24167 0 16175 25536 0 17604 23605 0 17966 18891 0 18750 20259 0 14069 24972 0 16798 16908 0 13952 25495 0 16814 18014 0 15108 24204 0 15436 23954 0 16454 25726 0 18134 24310 0 17651 18922 0 18063 19623 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 142730000 54047000 88685000 0 NaN 4581 1098 367 367 1587;2502 1672;1673;2641;2642 1809;2835;2837 2010;3163;3165 2835 3163 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17414 1809 2010 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16080 1809 2010 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16080 Q16181 426 Q16181 Q16181 Septin-7 SEPT7 sp|Q16181|SEPT7_HUMAN Septin-7 OS=Homo sapiens GN=SEPT7 PE=1 SV=2 0.987539 20.228 0.000396879 104.88 81.401 104.88 1 T WEAQQRILEQQNSSRTLEKNKKKGKIF____ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX ILEQQNS(0.003)S(0.009)RT(0.988)LEK ILEQQNS(-25.04)S(-20.23)RT(20.23)LEK 10 3 1.053 31967 0 0 22814 0 0 32755 0 0 24670 0 0 33110 0 0 33400 0 0 36790 0 0 31958 0 0 25845 0 0 8729.6 0 0 30252 0 0 21562 0 0 32948 0 0 25357 0 0 33621 0 0 33088 0 0 36972 0 0 32376 0 0 25965 0 0 8959.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 43018000 43018000 0 0 NaN 4582 1100 426 426 1879 1983 2141 2400 2141 2400 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13399 2141 2400 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13399 2141 2400 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13399 Q16555 509 Q16555 Q16555 Dihydropyrimidinase-related protein 2 DPYSL2 sp|Q16555|DPYL2_HUMAN Dihydropyrimidinase-related protein 2 OS=Homo sapiens GN=DPYSL2 PE=1 SV=1 0.99979 36.782 2.97763E-10 177.05 144.32 177.05 1 T VPRGLYDGPVCEVSVTPKTVTPASSAKTSPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPXXXXXXXXXXXXX GLYDGPVCEVSVT(1)PK GLY(-154.84)DGPVCEVS(-36.78)VT(36.78)PK 13 3 0.22946 17863 0 0 7349.5 0 0 19933 0 0 7475 0 0 5968.6 0 0 21578 0 0 7054.1 0 0 12495 0 0 8357.6 0 0 15374 0 0 16910 0 0 6943.5 0 0 19784 0 0 7894.1 0 0 6898.1 0 0 20914 0 0 7164 0 0 13348 0 0 8191.1 0 0 14765 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 32786000 32786000 0 0 NaN 4583 1107 509 509 1521 1601 1730 1922 1730 1922 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18023 1730 1922 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18023 1730 1922 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18023 Q16555 514 Q16555 Q16555 Dihydropyrimidinase-related protein 2 DPYSL2 sp|Q16555|DPYL2_HUMAN Dihydropyrimidinase-related protein 2 OS=Homo sapiens GN=DPYSL2 PE=1 SV=1 0.95598 13.3769 6.09493E-05 136.49 38.256 136.49 1 T YDGPVCEVSVTPKTVTPASSAKTSPAKQQAP X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX T(0.044)VT(0.956)PASSAK T(-13.38)VT(13.38)PAS(-40.48)S(-52.43)AK 3 2 -0.10469 86255 0 0 18477 0 0 86599 0 0 20407 0 0 31004 0 0 78598 0 0 28407 0 0 44723 0 0 21040 0 0 5890.6 0 0 81620 0 0 17465 0 0 86495 0 0 21770 0 0 34702 0 0 75772 0 0 28838 0 0 46351 0 0 21073 0 0 6581.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 71337000 71337000 0 0 NaN 4584 1107 514 514 5025 5359 5711 6350 5711 6350 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8580 5711 6350 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8580 5711 6350 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8580 Q16643 335 Q16643 Q16643 Drebrin DBN1 sp|Q16643|DREB_HUMAN Drebrin OS=Homo sapiens GN=DBN1 PE=1 SV=4 0.558261 1.13375 2.83562E-05 129.46 110.9 129.46 1 T SHLDSHRRMAPTPIPTRSPSDSSTASTPVAE X;X;X;X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPPP MAPTPIPT(0.558)RS(0.43)PS(0.012)DSSTASTPVAEQIER MAPT(-40.78)PIPT(1.13)RS(-1.13)PS(-16.82)DS(-40.33)S(-47.55)T(-46.7)AS(-60.75)T(-59.98)PVAEQIER 8 3 -0.50201 4272.9 0 0 5507.5 0 0 4928 0 0 6231.4 0 0 7234.6 0 0 5255.7 0 0 9136.8 0 0 7732.7 0 0 6514.2 0 0 7271.6 0 0 4045.7 0 0 5206.8 0 0 4956.4 0 0 6338.4 0 0 7229.9 0 0 5356.4 0 0 9137.4 0 0 7879.6 0 0 6538.8 0 0 7026.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 36427000 36427000 0 0 NaN 4585 1110 335 335 2667 2817;2818 3022 3367 3022 3367 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14035 3022 3367 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14035 3022 3367 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14035 Q1KMD3 165 Q1KMD3 Q1KMD3 Heterogeneous nuclear ribonucleoprotein U-like protein 2 HNRNPUL2 sp|Q1KMD3|HNRL2_HUMAN Heterogeneous nuclear ribonucleoprotein U-like protein 2 OS=Homo sapiens GN=HNRNPUL2 PE=1 SV=1 0.785342 5.79703 0.00485009 93.226 75.9 93.226 1 T GKREEDEPEERSGDETPGSEVPGDKAAEEQG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPXXXXXX S(0.207)GDET(0.785)PGS(0.008)EVPGDK S(-5.8)GDET(5.8)PGS(-19.95)EVPGDK 5 3 0.44944 10680 0 0 14339 0 0 13242 0 0 14742 0 0 11601 0 0 12867 0 0 11290 0 0 14025 0 0 16467 0 0 4660.2 0 0 10116 0 0 13548 0 0 13166 0 0 15082 0 0 11870 0 0 13004 0 0 11649 0 0 14164 0 0 16029 0 0 4712.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9704700 9704700 0 0 NaN 4586 1118 165 165 3778 4022 4289 4768 4289 4768 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10285 4289 4768 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10285 4289 4768 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10285 Q29RF7 1208 Q29RF7 Q29RF7 Sister chromatid cohesion protein PDS5 homolog A PDS5A sp|Q29RF7|PDS5A_HUMAN Sister chromatid cohesion protein PDS5 homolog A OS=Homo sapiens GN=PDS5A PE=1 SV=1 0.99533 23.2864 5.14809E-06 171.5 102.17 126.26 1 T GVSENEENPVRIISVTPVKNIDPVKNKEINS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPXXXXXX IIS(0.005)VT(0.995)PVKNIDPVK IIS(-23.29)VT(23.29)PVKNIDPVK 5 3 1.3559 35135 0 0 36726 0 0 34600 0 0 35588 0 0 22412 0 0 32661 0 0 21672 0 0 31971 0 0 36645 0 0 12194 0 0 33245 0 0 34687 0 0 34720 0 0 36563 0 0 23467 0 0 32883 0 0 22506 0 0 32463 0 0 35522 0 0 12222 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 75975000 75975000 0 0 NaN 4587 1119 1208 1208 1865;1866 1969;1970 2127;2128 2384;2385 2128 2385 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20576 2127 2384 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18231 2127 2384 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18231 Q2M2I8 389 Q2M2I8 Q2M2I8 AP2-associated protein kinase 1 AAK1 sp|Q2M2I8|AAK1_HUMAN AP2-associated protein kinase 1 OS=Homo sapiens GN=AAK1 PE=1 SV=3 1 76.7908 0.000764642 100.24 72.594 100.24 1 T QTQPNPGILPIQPALTPRKRATVQPPPQAAG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX AGQTQPNPGILPIQPALT(1)PR AGQT(-76.79)QPNPGILPIQPALT(76.79)PR 18 3 1.8239 6651.9 0 0 4654.3 0 0 7299.3 0 0 4351.6 0 0 4499.5 0 0 7321.2 0 0 4832.8 0 0 6627.5 0 0 5063 0 0 18460 0 0 6296.8 0 0 4395 0 0 7279.1 0 0 4534.3 0 0 4736.4 0 0 7231.9 0 0 4909.6 0 0 7231 0 0 4985.9 0 0 17536 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11410000 11410000 0 0 NaN 4588 1122 389 389 221 235 253 281 253 281 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19795 253 281 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19795 253 281 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19795 Q2M2I8 653 Q2M2I8 Q2M2I8 AP2-associated protein kinase 1 AAK1 sp|Q2M2I8|AAK1_HUMAN AP2-associated protein kinase 1 OS=Homo sapiens GN=AAK1 PE=1 SV=3 0.5 0 2.60456E-07 160.05 134.33 160.05 1 T DVTHSAVFGVPASKSTQLLQAAAAEASLNKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.5)T(0.5)QLLQAAAAEASLNK S(0)T(0)QLLQAAAAEAS(-142.13)LNK 2 3 -1.0255 25004 0 0 9539.1 0 0 29450 0 0 9876 0 0 7209.2 0 0 26368 0 0 7158.7 0 0 17152 0 0 10669 0 0 17800 0 0 23677 0 0 9013.2 0 0 29126 0 0 10385 0 0 8631.7 0 0 25612 0 0 7385.5 0 0 18098 0 0 10379 0 0 17158 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 49211000 49211000 0 0 NaN 4589 1122 653 653 4515 4809 5122 5688 5122 5688 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21218 5122 5688 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21218 5122 5688 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21218 Q2M2I8 620 Q2M2I8 Q2M2I8 AP2-associated protein kinase 1 AAK1 sp|Q2M2I8|AAK1_HUMAN AP2-associated protein kinase 1 OS=Homo sapiens GN=AAK1 PE=1 SV=3 0.994364 22.5508 4.39914E-05 135.5 107.1 135.5 2 T TTPPPAVQGQKVGSLTPPSSPKTQRAGHRRI X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX VGS(0.006)LT(0.994)PPS(0.514)S(0.486)PK VGS(-22.55)LT(22.55)PPS(0.24)S(-0.24)PK 5 2 0.033734 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4590 1122 620 620 5122 5459 5815 6466 5815 6466 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14561 5815 6466 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14561 5815 6466 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14561 Q2M2I8 606 Q2M2I8 Q2M2I8 AP2-associated protein kinase 1 AAK1 sp|Q2M2I8|AAK1_HUMAN AP2-associated protein kinase 1 OS=Homo sapiens GN=AAK1 PE=1 SV=3 0.763423 5.08793 1.01857E-06 138.98 114.45 138.98 1 T PAIQAPVRQQPKVQTTPPPAVQGQKVGSLTP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX VQT(0.237)T(0.763)PPPAVQGQK VQT(-5.09)T(5.09)PPPAVQGQK 4 3 -0.26646 33456 0 0 14467 0 0 33986 0 0 15164 0 0 14039 0 0 35535 0 0 15153 0 0 19486 0 0 15993 0 0 4967.2 0 0 31660 0 0 13670 0 0 33950 0 0 15855 0 0 15441 0 0 34517 0 0 15394 0 0 20318 0 0 15745 0 0 5128.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 33663000 33663000 0 0 NaN 4591 1122 606 606 5232 5577 5945 6609 5945 6609 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11525 5945 6609 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11525 5945 6609 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11525 Q3MHD2 73 Q3MHD2 Q3MHD2 Protein LSM12 homolog LSM12 sp|Q3MHD2|LSM12_HUMAN Protein LSM12 homolog OS=Homo sapiens GN=LSM12 PE=1 SV=2 0.5 0 2.7173E-10 181.86 152.17 181.86 1 T INLQYVSEVEIINDRTETPPPLASLNVSKLA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPXX T(0.5)ET(0.5)PPPLASLNVSK T(0)ET(0)PPPLAS(-104.09)LNVS(-163.45)K 1 3 -0.2307 6356.3 0 0 6096.8 0 0 6257.3 0 0 7182 0 0 5972.9 0 0 6496.5 0 0 6911.6 0 0 6245.2 0 0 6773.4 0 0 5448.7 0 0 6014.3 0 0 5765.6 0 0 6304.7 0 0 7297 0 0 6091.2 0 0 6549.4 0 0 6986.5 0 0 6438.3 0 0 6689.1 0 0 5275.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 105640000 105640000 0 0 NaN 4592 1129 73 73 4697 5008 5334 5929 5334 5929 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18888 5334 5929 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18888 5334 5929 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18888 Q3MHD2 75 Q3MHD2 Q3MHD2 Protein LSM12 homolog LSM12 sp|Q3MHD2|LSM12_HUMAN Protein LSM12 homolog OS=Homo sapiens GN=LSM12 PE=1 SV=2 0.996579 24.6431 1.0779E-22 271.41 232.54 271.41 1 T LQYVSEVEIINDRTETPPPLASLNVSKLASK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPXXXX T(0.003)ET(0.997)PPPLASLNVSK T(-24.64)ET(24.64)PPPLAS(-100.46)LNVS(-149.21)K 3 2 -0.55291 21467 0 0 23486 0 0 22168 0 0 23792 0 0 19477 0 0 22214 0 0 20102 0 0 22696 0 0 26326 0 0 25693 0 0 20316 0 0 22188 0 0 22250 0 0 24385 0 0 19939 0 0 22391 0 0 20603 0 0 23521 0 0 25712 0 0 24718 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 132800000 132800000 0 0 NaN 4593 1129 75 75 4697 5008 5334;5335 5929;5930 5335 5930 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19075 5335 5930 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19075 5335 5930 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19075 Q4KMP7 148 Q4KMP7 Q4KMP7 TBC1 domain family member 10B TBC1D10B sp|Q4KMP7|TB10B_HUMAN TBC1 domain family member 10B OS=Homo sapiens GN=TBC1D10B PE=1 SV=3 0.998213 27.9065 5.43691E-11 186.24 163.8 186.24 1 T PKTEEARPSPAPGPGTPTGTPTRTPSRTAPG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPPPXXXXXXXX TEEARPSPAPGPGT(0.998)PT(0.002)GTPTR T(-103.6)EEARPS(-86.4)PAPGPGT(27.91)PT(-27.91)GT(-37.94)PT(-50.04)R 14 3 0.1131 6652.5 0 0 10887 0 0 7523.5 0 0 11051 0 0 8286.6 0 0 6057.2 0 0 9329.6 0 0 8956 0 0 11035 0 0 3468.4 0 0 6298.2 0 0 10286 0 0 7537 0 0 11256 0 0 8380.6 0 0 6337.2 0 0 9493.4 0 0 8975.7 0 0 10816 0 0 3473.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24594000 24594000 0 0 NaN 4594 1139 148 148 282;4678 303;4989 5314 5906 5314 5906 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7655 5314 5906 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7655 5314 5906 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7655 Q53GT1 605 Q53GT1 Q53GT1 Kelch-like protein 22 KLHL22 sp|Q53GT1|KLH22_HUMAN Kelch-like protein 22 OS=Homo sapiens GN=KLHL22 PE=1 SV=2 0.999419 32.3524 0.0226046 76.151 50.027 76.151 1 T VLTLPRSLLLEPPRGTPDRSQADPDFASEVM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX S(0.001)LLLEPPRGT(0.999)PDR S(-32.35)LLLEPPRGT(32.35)PDR 10 3 -1.0065 10497 0 0 9912.3 0 0 11073 0 0 11365 0 0 9546.2 0 0 10453 0 0 9766.8 0 0 10815 0 0 10603 0 0 4133.6 0 0 9934.8 0 0 9372.1 0 0 11098 0 0 11566 0 0 9781.5 0 0 10531 0 0 9954.1 0 0 10959 0 0 10426 0 0 4142.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9970000 9970000 0 0 NaN 4595 1151 605 605 3949 4208 4490 4991 4490 4991 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15839 4490 4991 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15839 4490 4991 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15839 Q58A45 353 Q58A45 Q58A45 PAB-dependent poly(A)-specific ribonuclease subunit PAN3 PAN3 sp|Q58A45|PAN3_HUMAN PAB-dependent poly(A)-specific ribonuclease subunit PAN3 OS=Homo sapiens GN=PAN3 PE=1 SV=3 0.733632 4.39999 1.28732E-05 137.88 122.26 137.88 1 T SAGSSPLHSPKITPHTSPAPRRRSHTPNPAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX ITPHT(0.734)S(0.266)PAPR IT(-57.32)PHT(4.4)S(-4.4)PAPR 5 3 -0.033005 20883 0 0 13622 0 0 23049 0 0 14436 0 0 13137 0 0 21222 0 0 13978 0 0 16883 0 0 13510 0 0 1656.8 0 0 19769 0 0 12873 0 0 22965 0 0 14882 0 0 13928 0 0 20918 0 0 14175 0 0 17152 0 0 13350 0 0 1950.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17196000 17196000 0 0 NaN 4596 1158 353 353 1965 2076 2240 2502 2240 2502 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7536 2240 2502 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7536 2240 2502 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7536 Q5H9B9;Q9NSY1 264;1014 Q5H9B9 Q5H9B9 Putative BMP-2-inducible kinase-like protein;BMP-2-inducible protein kinase BMP2KL;BMP2K sp|Q5H9B9|BM2KL_HUMAN Putative BMP-2-inducible kinase-like protein OS=Homo sapiens GN=BMP2KL PE=5 SV=2;sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2 0.991504 22.6411 0.0141866 66.331 52.652 66.331 1 T GTPTSKKKTLKPTYRTPERARRHKKVGRRVS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX TLKPT(0.005)Y(0.003)RT(0.992)PER T(-37.98)LKPT(-22.64)Y(-25.28)RT(22.64)PER 8 4 0.23854 9512.1 0 0 19890 0 0 10374 0 0 21942 0 0 12427 0 0 10251 0 0 12170 0 0 14961 0 0 22773 0 0 1407.1 0 0 9004.1 0 0 18801 0 0 10421 0 0 22216 0 0 12496 0 0 10859 0 0 12690 0 0 14867 0 0 22020 0 0 1671.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18762000 18762000 0 0 NaN 4597 1162 264 264 4772 5089 5422 6030 5422 6030 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9562 5422 6030 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9562 5422 6030 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9562 Q5M775 809 Q5M775 Q5M775 Cytospin-B SPECC1 sp|Q5M775|CYTSB_HUMAN Cytospin-B OS=Homo sapiens GN=SPECC1 PE=1 SV=1 0.489613 0 0.000181371 113.52 83.539 113.52 T EVDAAGRWPGVCVSRTSPTPPESATTVKSLI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX T(0.49)S(0.49)PT(0.021)PPESATTVK T(0)S(0)PT(-13.72)PPES(-72.77)AT(-83.08)T(-101.35)VK 1 3 -3.3784 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4598 1173 809 809 4946 5274 5617 6243 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10995 5617 6243 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10995 5617 6243 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10995 Q5SSJ5 51 Q5SSJ5 Q5SSJ5 Heterochromatin protein 1-binding protein 3 HP1BP3 sp|Q5SSJ5|HP1B3_HUMAN Heterochromatin protein 1-binding protein 3 OS=Homo sapiens GN=HP1BP3 PE=1 SV=1 0.988035 22.0866 0.0411162 58.752 29.425 50.722 1 T DSTMPIRRTVNSTRETPPKSKLAEGEEEKPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPXXXXXXXXXX T(0.002)VNS(0.002)T(0.002)RET(0.988)PPKS(0.006)K T(-26.43)VNS(-27.16)T(-27.62)RET(22.09)PPKS(-22.09)K 8 4 0.2224 48597 0 0 40334 0 0 51829 0 0 45834 0 0 71332 0 0 52309 0 0 70977 0 0 52269 0 0 48961 0 0 5706.5 0 0 45997 0 0 38133 0 0 52241 0 0 46830 0 0 71210 0 0 52154 0 0 71663 0 0 52603 0 0 49243 0 0 6583.1 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 243530000 243530000 0 0 NaN 4599 1179 51 51 5011;5012 5342;5343 5692;5693 6322;6323 5693 6323 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7674 5692 6322 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7560 5693 6323 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7674 Q5T200 263 Q5T200 Q5T200 Zinc finger CCCH domain-containing protein 13 ZC3H13 sp|Q5T200|ZC3HD_HUMAN Zinc finger CCCH domain-containing protein 13 OS=Homo sapiens GN=ZC3H13 PE=1 SV=1 1 44.5551 0.000180263 102.27 79.613 44.555 2 T QRNSKTNQSKKKGPRTPSPPPPIPEDIALGK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP GPRT(1)PS(1)PPPPIPEDIALGKK GPRT(44.56)PS(44.56)PPPPIPEDIALGKK 4 4 0.59773 0 10290 0 0 13110 0 0 12232 0 0 12226 0 0 11356 0 0 11220 0 0 10370 0 0 11282 0 0 13122 0 0 33993 0 0 9744.3 0 0 12379 0 0 12193 0 0 12591 0 0 11565 0 0 11356 0 0 10679 0 0 12339 0 0 12831 0 0 32270 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 19546000 0 19546000 0 NaN 4600 1183 263 263 1559;1560;4854 1643;1644;5179 1776;1777 1974;1975 1777 1975 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18691 1776 1974 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19885 1776 1974 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19885 Q5T200 317 Q5T200 Q5T200 Zinc finger CCCH domain-containing protein 13 ZC3H13 sp|Q5T200|ZC3HD_HUMAN Zinc finger CCCH domain-containing protein 13 OS=Homo sapiens GN=ZC3H13 PE=1 SV=1 0.346861 0 0.0322096 63.165 53.253 63.165 T RDFERQREKRDKPRSTSPAGQHHSPISSRHH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPXX S(0.306)T(0.347)S(0.347)PAGQHHS(0.804)PIS(0.103)S(0.092)R S(-0.55)T(0)S(0)PAGQHHS(8.93)PIS(-8.93)S(-9.42)R 2 3 0.323 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4601 1183 317 317 4522 4821 5136 5704 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5560 5136 5704 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5560 5136 5704 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5560 Q5T200 364 Q5T200 Q5T200 Zinc finger CCCH domain-containing protein 13 ZC3H13 sp|Q5T200|ZC3HD_HUMAN Zinc finger CCCH domain-containing protein 13 OS=Homo sapiens GN=ZC3H13 PE=1 SV=1 0.872637 8.35789 0.0126021 93.096 72.194 93.096 1 T PRRKRTPSPSYQRTLTPPLRRSASPYPSHSL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX T(0.127)LT(0.873)PPLRR T(-8.36)LT(8.36)PPLRR 3 3 -0.1704 44550 0 0 45507 0 0 41831 0 0 44479 0 0 33347 0 0 48789 0 0 38680 0 0 37638 0 0 48559 0 0 1075.3 0 0 42145 0 0 42983 0 0 42184 0 0 45802 0 0 34427 0 0 48574 0 0 39387 0 0 38218 0 0 47495 0 0 1883.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 72595000 72595000 0 0 NaN 4602 1183 364 364 4796 5116 5455 6071 5455 6071 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11532 5455 6071 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11532 5455 6071 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11532 Q5T4S7 363 Q5T4S7 Q5T4S7 E3 ubiquitin-protein ligase UBR4 UBR4 sp|Q5T4S7|UBR4_HUMAN E3 ubiquitin-protein ligase UBR4 OS=Homo sapiens GN=UBR4 PE=1 SV=1 0.685121 5.91693 4.19763E-16 226.9 188.66 226.9 1 T AILHVGSAQQVRTGSTSSKEDDYESDAATIV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP T(0.006)GS(0.175)T(0.685)S(0.127)S(0.006)KEDDYESDAATIVQK T(-20.43)GS(-5.92)T(5.92)S(-7.32)S(-20.43)KEDDY(-127.39)ES(-98.73)DAAT(-164.13)IVQK 4 3 0.31325 12345 0 0 8527.8 0 0 12722 0 0 7009.9 0 0 5727.3 0 0 13324 0 0 5649.9 0 0 9796.9 0 0 7656.4 0 0 14486 0 0 11683 0 0 8047.3 0 0 12703 0 0 7391.6 0 0 6225.9 0 0 13057 0 0 5809.7 0 0 10400 0 0 7469.4 0 0 13867 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19121000 19121000 0 0 NaN 4603 1184 363 363 4735 5050 5382 5985 5382 5985 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16247 5382 5985 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16247 5382 5985 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16247 Q5T5U3 316 Q5T5U3 Q5T5U3 Rho GTPase-activating protein 21 ARHGAP21 sp|Q5T5U3|RHG21_HUMAN Rho GTPase-activating protein 21 OS=Homo sapiens GN=ARHGAP21 PE=1 SV=1 0.362354 0 1.76377E-05 132.94 113.62 132.94 T RYGVSEQTSLKTVSRTTSPPLSIPTTHLIHQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP T(0.362)T(0.362)S(0.275)PPLSIPTTHLIHQPAGSR T(0)T(0)S(-1.19)PPLS(-68.07)IPT(-103.63)T(-108.03)HLIHQPAGS(-127.17)R 1 4 -0.94507 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4604 1187 316 316 4989 5318 5666 6295 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16005 5666 6295 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16005 5666 6295 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16005 Q5T5U3 317 Q5T5U3 Q5T5U3 Rho GTPase-activating protein 21 ARHGAP21 sp|Q5T5U3|RHG21_HUMAN Rho GTPase-activating protein 21 OS=Homo sapiens GN=ARHGAP21 PE=1 SV=1 0.362354 0 1.76377E-05 132.94 113.62 132.94 T YGVSEQTSLKTVSRTTSPPLSIPTTHLIHQP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T(0.362)T(0.362)S(0.275)PPLSIPTTHLIHQPAGSR T(0)T(0)S(-1.19)PPLS(-68.07)IPT(-103.63)T(-108.03)HLIHQPAGS(-127.17)R 2 4 -0.94507 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4605 1187 317 317 4989 5318 5666 6295 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16005 5666 6295 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16005 5666 6295 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16005 Q5T8P6 516 Q5T8P6 Q5T8P6 RNA-binding protein 26 RBM26 sp|Q5T8P6|RBM26_HUMAN RNA-binding protein 26 OS=Homo sapiens GN=RBM26 PE=1 SV=3 0.608783 1.92044 0.0017763 105.13 65.197 105.13 1 T VPTKKTWFDKPNFNRTNSPGFQKKVQFGNEN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX T(0.609)NS(0.391)PGFQK T(1.92)NS(-1.92)PGFQK 1 2 -0.50602 69248 0 0 47755 0 0 68191 0 0 41947 0 0 68788 0 0 66355 0 0 67107 0 0 59377 0 0 50463 0 0 10715 0 0 65522 0 0 45080 0 0 68730 0 0 43817 0 0 69731 0 0 65354 0 0 67934 0 0 60152 0 0 50498 0 0 11464 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 57919000 57919000 0 0 NaN 4606 1189 516 516 4815 5137 5476 6094 5476 6094 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10752 5476 6094 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10752 5476 6094 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10752 Q5TKA1 297 Q5TKA1 Q5TKA1 Protein lin-9 homolog LIN9 sp|Q5TKA1|LIN9_HUMAN Protein lin-9 homolog OS=Homo sapiens GN=LIN9 PE=1 SV=1 1 61.6789 0.0360682 61.679 47.161 61.679 1 T IAAFGQKQRPSRFFMTPPRLHYTPPLQSPII X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX FFMT(1)PPR FFMT(61.68)PPR 4 2 -0.45145 5254.2 0 0 7246.6 0 0 5352.7 0 0 7030.9 0 0 5033.6 0 0 4865.6 0 0 4881.9 0 0 6158.8 0 0 8257.3 0 0 5628.9 0 0 4972.2 0 0 6844.3 0 0 5380 0 0 7197.5 0 0 5128 0 0 5000.5 0 0 5069.1 0 0 6297.2 0 0 8004.3 0 0 5442.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5392200 5392200 0 0 NaN 4607 1195 297 297 1259 1324 1425 1580 1425 1580 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20287 1425 1580 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20287 1425 1580 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20287 Q5TZA2 725 Q5TZA2 Q5TZA2 Rootletin CROCC sp|Q5TZA2|CROCC_HUMAN Rootletin OS=Homo sapiens GN=CROCC PE=1 SV=1 0.5 0 0.0231202 62.2 22.179 62.2 1 T LTKAEAGRVELELSMTKLRAEEASLQDSLSK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VELELS(0.5)MT(0.5)K VELELS(0)MT(0)K 8 2 -3.6496 7163.3 0 0 13633 0 0 6910.8 0 0 12681 0 0 9479.8 0 0 7485.7 0 0 9650.3 0 0 10899 0 0 15315 0 0 21884 0 0 6777.4 0 0 12873 0 0 7005 0 0 12995 0 0 9476.2 0 0 7819.2 0 0 9970.1 0 0 11459 0 0 14871 0 0 20859 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9670100 9670100 0 0 NaN 4608 1196 725 725 5092 5428 5780 6424 5780 6424 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22695 5780 6424 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22695 5780 6424 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22695 Q5VT52 723 Q5VT52 Q5VT52 Regulation of nuclear pre-mRNA domain-containing protein 2 RPRD2 sp|Q5VT52|RPRD2_HUMAN Regulation of nuclear pre-mRNA domain-containing protein 2 OS=Homo sapiens GN=RPRD2 PE=1 SV=1 1 64.3148 6.88913E-11 198.6 163.88 198.6 1 T FQRGPTSTSIDNIDGTPVRDERSGTPTQDEM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPXXXXXXXXX GPTSTSIDNIDGT(1)PVRDER GPT(-98.42)S(-90.35)T(-81.29)S(-64.31)IDNIDGT(64.31)PVRDER 13 3 0.52399 19125 0 0 21148 0 0 20144 0 0 21935 0 0 17879 0 0 21252 0 0 16444 0 0 19827 0 0 23452 0 0 15464 0 0 18101 0 0 19982 0 0 20195 0 0 22463 0 0 18264 0 0 21344 0 0 16999 0 0 20409 0 0 22843 0 0 15020 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 32657000 32657000 0 0 NaN 4609 1201 723 723 1570 1654 1788 1986 1788 1986 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11855 1788 1986 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11855 1788 1986 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11855 Q5VUA4 2037 Q5VUA4 Q5VUA4 Zinc finger protein 318 ZNF318 sp|Q5VUA4|ZN318_HUMAN Zinc finger protein 318 OS=Homo sapiens GN=ZNF318 PE=1 SV=2 0.797885 5.96341 1.07065E-06 159.01 133.81 159.01 2 T VDFCTTRVSPAHRSPTVLCQKVCEENSVSPI X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPXXXXXXXXXX VS(1)PAHRS(0.202)PT(0.798)VLCQK VS(73.02)PAHRS(-5.96)PT(5.96)VLCQK 9 3 -0.52394 0 37320 0 0 41215 0 0 37888 0 0 40240 0 0 17624 0 0 39365 0 0 20618 0 0 34340 0 0 41367 0 0 10914 0 0 35316 0 0 38929 0 0 37876 0 0 41363 0 0 19144 0 0 39454 0 0 21412 0 0 34969 0 0 39936 0 0 11072 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 41351000 0 41351000 0 NaN 4610 1204 2037 2037 5257 5603 5973 6637 5973 6637 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11083 5973 6637 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11083 5973 6637 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11083 Q5VVW2 399 Q5VVW2 Q5VVW2 GTPase-activating Rap/Ran-GAP domain-like protein 3 GARNL3 sp|Q5VVW2|GARL3_HUMAN GTPase-activating Rap/Ran-GAP domain-like protein 3 OS=Homo sapiens GN=GARNL3 PE=2 SV=2 1 40.4755 0.0362952 40.475 16.542 40.475 1 T KATLETPTFAQKRRRTLDMLIRSLHQDLMPD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX RRT(1)LDMLIR RRT(40.48)LDMLIR 3 3 3.6306 11941 0 0 5377.7 0 0 12930 0 0 4989.5 0 0 10478 0 0 12424 0 0 7718.2 0 0 6732 0 0 5100 0 0 1402.2 0 0 11303 0 0 5077.9 0 0 12928 0 0 5266.2 0 0 10737 0 0 12052 0 0 7917.3 0 0 7015.5 0 0 5143.2 0 0 1476.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17618000 17618000 0 0 NaN 4611 1209 399 399 3458 3674 3920 4355 3920 4355 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15346 3920 4355 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15346 3920 4355 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15346 Q5W0B1 524 Q5W0B1 Q5W0B1 RING finger protein 219 RNF219 sp|Q5W0B1|RN219_HUMAN RING finger protein 219 OS=Homo sapiens GN=RNF219 PE=1 SV=1 0.370459 0 1.19791E-06 143.88 129.19 143.88 T KRLNSIRSFEMNRTRTSSEASMDAAYLDKIS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPXX T(0.37)S(0.37)S(0.259)EASMDAAYLDK T(0)S(0)S(-1.55)EAS(-38.35)MDAAY(-125.28)LDK 1 3 -0.029303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4612 1217 524 524 4953 5281 5624 6251 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16658 5624 6251 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16658 5624 6251 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16658 Q63ZY6 258 Q63ZY6 Q63ZY6 Putative methyltransferase NSUN5C NSUN5P2 sp|Q63ZY6|NSN5C_HUMAN Putative methyltransferase NSUN5C OS=Homo sapiens GN=NSUN5P2 PE=5 SV=2 0.978357 16.5451 0.020515 79.311 49.983 79.311 2 T MPTSASQAKASAPERTPSPAPKRKKRAKSCS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPXXXXXXXXX AS(0.023)APERT(0.978)PS(0.998)PAPK AS(-16.55)APERT(16.55)PS(28.12)PAPK 7 3 -1.11 0 12782 0 0 13103 0 0 13472 0 0 12362 0 0 9648.3 0 0 13905 0 0 9836.3 0 0 12124 0 0 12813 0 0 2962.9 0 0 12098 0 0 12374 0 0 13479 0 0 12763 0 0 10022 0 0 13852 0 0 10085 0 0 12319 0 0 12517 0 0 3070.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 13602000 0 13602000 0 NaN 4613 1220 258 258 434 463 498 558 498 558 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7778 498 558 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7778 498 558 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7778 Q9Y4E1;Q641Q2;Q5SNT6 287;287;199 Q9Y4E1 Q9Y4E1 WASH complex subunit FAM21C;WASH complex subunit FAM21A;WASH complex subunit FAM21B FAM21C;FAM21A;FAM21B sp|Q9Y4E1|FA21C_HUMAN WASH complex subunit FAM21C OS=Homo sapiens GN=FAM21C PE=1 SV=3;sp|Q641Q2|FA21A_HUMAN WASH complex subunit FAM21A OS=Homo sapiens GN=FAM21A PE=2 SV=3;sp|Q5SNT6|FA21B_HUMAN WASH complex subunit FAM21B OS=Homo sapiens GN=FAM21B PE=2 SV= 0.836344 8.45041 1.33182E-05 137.27 107.97 137.27 1 T IEDIEENTRPKRSRPTSFADELAARIKGDAM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX S(0.044)RPT(0.836)S(0.119)FADELAAR S(-12.77)RPT(8.45)S(-8.45)FADELAAR 4 2 0.57352 14042 0 0 7079.7 0 0 14890 0 0 7968.4 0 0 10216 0 0 15804 0 0 10380 0 0 11651 0 0 7675 0 0 20314 0 0 13290 0 0 6693 0 0 14888 0 0 8253.3 0 0 10643 0 0 15478 0 0 10484 0 0 12460 0 0 7687.6 0 0 19397 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20997000 20997000 0 0 NaN 4614 1221 287 287 4272 4551 4851 5383 4851 5383 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14982 4851 5383 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14982 4851 5383 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14982 Q66K74 638 Q66K74 Q66K74 Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain MAP1S sp|Q66K74|MAP1S_HUMAN Microtubule-associated protein 1S OS=Homo sapiens GN=MAP1S PE=1 SV=2 0.994182 22.3969 1.17558E-17 220.67 194.54 220.67 2 T ALELPLAASSIPRPRTPSPESHRSPAEGSER X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPXXXXXXXX ALELPLAASS(0.006)IPRPRT(0.994)PS(0.991)PES(0.009)HR ALELPLAAS(-47.85)S(-22.4)IPRPRT(22.4)PS(20.54)PES(-20.54)HR 16 4 0.58821 0 4700.6 0 0 4065.2 0 0 5091.1 0 0 5009.8 0 0 4473.3 0 0 4141.9 0 0 3625.5 0 0 5021.2 0 0 5836 0 0 7684.9 0 0 4449.4 0 0 3845.6 0 0 5094.8 0 0 5072.3 0 0 4566.1 0 0 4215.9 0 0 3791.7 0 0 5234.1 0 0 5664.6 0 0 7352.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 24536000 0 24536000 0 NaN 4615 1224 638 638 288 309 330 368 330 368 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18903 330 368 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18903 330 368 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18903 Q6DD87 89 Q6DD87 Q6DD87 Zinc finger protein 787 ZNF787 sp|Q6DD87|ZN787_HUMAN Zinc finger protein 787 OS=Homo sapiens GN=ZNF787 PE=1 SV=3 0.582392 1.44447 2.52229E-10 194.51 144.15 194.51 1 T SFSHWSKLTRHQRTHTGERPNACADCGKTFS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPXXX T(0.418)HT(0.582)GERPNACADCGK T(-1.44)HT(1.44)GERPNACADCGK 3 3 -0.48561 5547.6 0 0 22699 0 0 5933.1 0 0 23306 0 0 18591 0 0 7098.5 0 0 18999 0 0 17232 0 0 25279 0 0 2272.3 0 0 5250.9 0 0 21446 0 0 6107.9 0 0 23633 0 0 18130 0 0 7969.9 0 0 19492 0 0 16960 0 0 24676 0 0 2538.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29073000 29073000 0 0 NaN 4616 1235 89 89 4742 5057 5389 5992 5389 5992 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5831 5389 5992 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5831 5389 5992 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5831 Q6ICG6 293 Q6ICG6 Q6ICG6 Uncharacterized protein KIAA0930 KIAA0930 sp|Q6ICG6|K0930_HUMAN Uncharacterized protein KIAA0930 OS=Homo sapiens GN=KIAA0930 PE=1 SV=1 0.999985 48.4907 3.58359E-08 174.44 129.59 174.44 1 T ASPMHERVTSFSTPPTPERNNRPAFFSPSLK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPXXXXXXXXXXXX VTSFSTPPT(1)PER VT(-96.62)S(-94.13)FS(-64.26)T(-48.49)PPT(48.49)PER 9 2 0.59704 32021 0 0 11017 0 0 31921 0 0 11161 0 0 10124 0 0 31733 0 0 12151 0 0 17819 0 0 11636 0 0 11386 0 0 30300 0 0 10409 0 0 31885 0 0 11781 0 0 11589 0 0 30736 0 0 12257 0 0 18756 0 0 11503 0 0 11133 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27160000 27160000 0 0 NaN 4617 1240 293 293 5297 5644 6016 6683 6016 6683 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13693 6016 6683 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13693 6016 6683 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13693 Q6KC79 713 Q6KC79 Q6KC79 Nipped-B-like protein NIPBL sp|Q6KC79|NIPBL_HUMAN Nipped-B-like protein OS=Homo sapiens GN=NIPBL PE=1 SV=2 0.905555 9.81734 0.008455 80.706 61.877 80.706 1 T SRPETPKQKGESRPETPKQKSDGHPETPKQK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX GES(0.094)RPET(0.906)PKQK GES(-9.82)RPET(9.82)PKQK 7 4 0.071463 9772.1 0 0 9960.8 0 0 10095 0 0 9300.3 0 0 10212 0 0 11033 0 0 10487 0 0 10129 0 0 9986.3 0 0 3748.9 0 0 9248.1 0 0 9405.8 0 0 10149 0 0 9617.4 0 0 10360 0 0 10978 0 0 10648 0 0 10308 0 0 9874.7 0 0 3764.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11140000 11140000 0 0 NaN 4618 1244 713 713 1413 1490 1599 1769 1599 1769 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6441 1599 1769 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6441 1599 1769 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6441 Q6NZY4 479 Q6NZY4 Q6NZY4 Zinc finger CCHC domain-containing protein 8 ZCCHC8 sp|Q6NZY4|ZCHC8_HUMAN Zinc finger CCHC domain-containing protein 8 OS=Homo sapiens GN=ZCCHC8 PE=1 SV=2 1 69.469 2.23168E-05 135.72 104.3 135.72 1 T FQPPLPPDTPPLPRGTPPPVFTPPLPKGTPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPXXXX GT(1)PPPVFTPPLPK GT(69.47)PPPVFT(-69.47)PPLPK 2 3 -0.33944 6104.4 0 0 7023.4 0 0 6015.9 0 0 5363.7 0 0 4784.4 0 0 6455 0 0 5345.3 0 0 6222.1 0 0 6883.2 0 0 12665 0 0 5776 0 0 6625.3 0 0 6048.7 0 0 5626.1 0 0 4937.3 0 0 6442.4 0 0 5456.2 0 0 6631.9 0 0 6726.4 0 0 12069 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 43804000 43804000 0 0 NaN 4619 1251 479 479 1659 1750 1892 2110 1892 2110 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21058 1892 2110 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21058 1892 2110 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21058 Q6NZY4 648 Q6NZY4 Q6NZY4 Zinc finger CCHC domain-containing protein 8 ZCCHC8 sp|Q6NZY4|ZCHC8_HUMAN Zinc finger CCHC domain-containing protein 8 OS=Homo sapiens GN=ZCCHC8 PE=1 SV=2 0.58814 1.60549 0.000277974 109.6 61.596 109.6 1 T CDISNGGSQKLFPADTSPSTATKIHSPIPDM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPXXXXXXXX LFPADT(0.588)S(0.406)PS(0.004)T(0.001)ATK LFPADT(1.61)S(-1.61)PS(-21.44)T(-26.89)AT(-40.37)K 6 2 0.59271 17528 0 0 15388 0 0 17153 0 0 15997 0 0 14987 0 0 15671 0 0 16196 0 0 15802 0 0 15219 0 0 19928 0 0 16584 0 0 14540 0 0 17269 0 0 16383 0 0 15353 0 0 15762 0 0 16401 0 0 16446 0 0 15058 0 0 19130 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 41558000 41558000 0 0 NaN 4620 1251 648 648 2350 2483 2672 2984 2672 2984 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18033 2672 2984 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18033 2672 2984 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18033 Q6P0N0 653 Q6P0N0 Q6P0N0 Mis18-binding protein 1 MIS18BP1 sp|Q6P0N0|M18BP_HUMAN Mis18-binding protein 1 OS=Homo sapiens GN=MIS18BP1 PE=1 SV=1 0.999999 60.2776 5.03431E-05 136.96 110.28 136.96 1 T RKYMAINQKKAYILVTPLKSRKVIEQRCMRY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX AYILVT(1)PLK AY(-60.28)ILVT(60.28)PLK 6 2 -0.22759 23878 0 0 8755.6 0 0 23957 0 0 8322 0 0 7429.9 0 0 25841 0 0 8600.9 0 0 14135 0 0 8143.1 0 0 19192 0 0 22595 0 0 8268.6 0 0 23919 0 0 8852.8 0 0 8531.9 0 0 25009 0 0 8686.2 0 0 15211 0 0 8054.2 0 0 18398 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15745000 15745000 0 0 NaN 4621 1252 653 653 585 623 664 739 664 739 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21126 664 739 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21126 664 739 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21126 Q6P1L5 105 Q6P1L5 Q6P1L5 Protein FAM117B FAM117B sp|Q6P1L5|F117B_HUMAN Protein FAM117B OS=Homo sapiens GN=FAM117B PE=1 SV=2 0.682625 3.34599 0.00166128 99.442 73.399 99.442 1 T RSTSPTRGGGNAAARTSPTVATQTGASATST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP T(0.683)S(0.316)PT(0.001)VATQTGASATSTR T(3.35)S(-3.35)PT(-26.86)VAT(-42.34)QT(-53.55)GAS(-63.92)AT(-74.43)S(-75.19)T(-73.97)R 1 2 0.29647 4137.5 0 0 3386 0 0 3214.4 0 0 4273.4 0 0 7688.2 0 0 3293.9 0 0 7526 0 0 5093.2 0 0 5242.5 0 0 7826.8 0 0 3911.6 0 0 3203.7 0 0 3344.2 0 0 4317.9 0 0 7533.4 0 0 3382.7 0 0 7606 0 0 5275 0 0 5269.7 0 0 7487.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10064000 10064000 0 0 NaN 4622 1255 105 105 4947 5275 5618 6244 5618 6244 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8164 5618 6244 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8164 5618 6244 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8164 Q6P1L5 218 Q6P1L5 Q6P1L5 Protein FAM117B FAM117B sp|Q6P1L5|F117B_HUMAN Protein FAM117B OS=Homo sapiens GN=FAM117B PE=1 SV=2 0.303267 0 0.0205663 65.887 47.292 65.887 T KTRQPSSSPSSIIRRTSSLDTLAAPYLAGHW X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP T(0.303)S(0.303)S(0.303)LDT(0.09)LAAPYLAGHWPR T(0)S(0)S(0)LDT(-5.27)LAAPY(-60.91)LAGHWPR 1 3 -0.61053 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4623 1255 218 218 4962 5290 5633 6260 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22708 5633 6260 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22708 5633 6260 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22708 Q6P2E9 727 Q6P2E9 Q6P2E9 Enhancer of mRNA-decapping protein 4 EDC4 sp|Q6P2E9|EDC4_HUMAN Enhancer of mRNA-decapping protein 4 OS=Homo sapiens GN=EDC4 PE=1 SV=1 0.505993 0.106637 8.62916E-18 224.39 196.88 224.39 1 T QEVEPLGLPQASPSRTRSPDVISSASTALSQ X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP T(0.506)RS(0.494)PDVISSASTALSQDIPEIASEALSR T(0.11)RS(-0.11)PDVIS(-32.77)S(-44.21)AS(-74.28)T(-89.28)ALS(-127.44)QDIPEIAS(-201.59)EALS(-211.3)R 1 4 -0.68307 7733.2 0 0 12581 0 0 8240 0 0 11484 0 0 8464.5 0 0 8403.7 0 0 8982.1 0 0 10315 0 0 10965 0 0 41047 0 0 7319.5 0 0 11879 0 0 8271.8 0 0 11809 0 0 8585.7 0 0 8662.3 0 0 9172.5 0 0 11509 0 0 10735 0 0 38889 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 234980000 234980000 0 0 NaN 4624 1258 727 727 4903 5228 5570 6192 5570 6192 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23604 5570 6192 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23604 5570 6192 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23604 Q6P4F7 790 Q6P4F7 Q6P4F7 Rho GTPase-activating protein 11A ARHGAP11A sp|Q6P4F7|RHGBA_HUMAN Rho GTPase-activating protein 11A OS=Homo sapiens GN=ARHGAP11A PE=1 SV=2 0.919799 10.5951 9.23514E-06 145.09 100.47 145.09 1 T SKPRPMRIAKQQSLETCEKTVSESSQMTEHR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX QQS(0.08)LET(0.92)CEK QQS(-10.6)LET(10.6)CEK 6 2 -3.0656 46364 0 0 27875 0 0 47335 0 0 25894 0 0 17764 0 0 48572 0 0 17710 0 0 27957 0 0 32509 0 0 6915.6 0 0 43875 0 0 26321 0 0 47246 0 0 27073 0 0 19786 0 0 47429 0 0 18435 0 0 29050 0 0 31449 0 0 7158.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18359000 18359000 0 0 NaN 4625 1260 790 790 3119 3309 3539 3923 3539 3923 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9413 3539 3923 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9413 3539 3923 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9413 Q6PFW1 963 Q6PFW1 Q6PFW1 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 PPIP5K1 sp|Q6PFW1|VIP1_HUMAN Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 OS=Homo sapiens GN=PPIP5K1 PE=1 SV=1 0.5 0 0.0544996 50.425 39.163 50.425 1 T LCPGKASDEPDRALQTSPQPPEGPGLPRRSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPXXX ALQT(0.5)S(0.5)PQPPEGPGLPR ALQT(0)S(0)PQPPEGPGLPR 4 3 0.016225 10589 0 0 7986.6 0 0 8652.3 0 0 9835 0 0 8858.6 0 0 9888 0 0 8215 0 0 8248.8 0 0 8882.9 0 0 5806.1 0 0 10012 0 0 7555.2 0 0 8825 0 0 9986.3 0 0 8969.1 0 0 9899.2 0 0 8411.4 0 0 8512.7 0 0 8736.5 0 0 5658 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15943000 15943000 0 0 NaN 4626 1266 963 963 307 328 349 389 349 389 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14577 349 389 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14577 349 389 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14577 Q6PJG2 655 Q6PJG2 Q6PJG2 ELM2 and SANT domain-containing protein 1 ELMSAN1 sp|Q6PJG2|EMSA1_HUMAN ELM2 and SANT domain-containing protein 1 OS=Homo sapiens GN=ELMSAN1 PE=1 SV=2 0.987263 19.3268 0.00175425 99.387 85.657 99.387 2 T LADHPSERSFELPPYTPPPILSPVREGSGLY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPXXXXXX S(0.001)FELPPY(0.015)T(0.987)PPPILS(0.996)PVR S(-28.94)FELPPY(-19.33)T(19.33)PPPILS(24.03)PVR 8 3 -0.025531 0 5324.8 0 0 5573.9 0 0 5362.7 0 0 6226.4 0 0 7173.8 0 0 6461.7 0 0 5853.1 0 0 6199.2 0 0 6553.1 0 0 37772 0 0 5038.8 0 0 5269.2 0 0 5417.4 0 0 6357 0 0 7155.1 0 0 6534.2 0 0 6040.5 0 0 7366.6 0 0 6436.2 0 0 35710 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 20855000 0 20855000 0 NaN 4627 1269 655 655 3738 3978 4242 4715 4242 4715 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23881 4242 4715 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23881 4242 4715 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23881 Q6PKG0 526 Q6PKG0 Q6PKG0 La-related protein 1 LARP1 sp|Q6PKG0|LARP1_HUMAN La-related protein 1 OS=Homo sapiens GN=LARP1 PE=1 SV=2 0.999652 34.5779 7.65859E-07 157.73 129.15 96.171 1 T YQKETESAPGSPRAVTPVPTKTEEVSNLKTL X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX AVT(1)PVPTK AVT(34.58)PVPT(-34.58)K 3 2 -0.41323 115420 0 0 124520 0 0 115690 0 0 118040 0 0 90061 0 0 110270 0 0 84529 0 0 105970 0 0 126130 0 0 19130 0 0 109220 0 0 117590 0 0 116150 0 0 121470 0 0 92868 0 0 110860 0 0 87448 0 0 107040 0 0 122690 0 0 20465 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 711360000 711360000 0 0 NaN 4628 1273 526 526 574;575 612;613 653;654 728;729 653 728 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11293 654 729 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15540 654 729 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15540 Q6PKG0 376 Q6PKG0 Q6PKG0 La-related protein 1 LARP1 sp|Q6PKG0|LARP1_HUMAN La-related protein 1 OS=Homo sapiens GN=LARP1 PE=1 SV=2 1 72.4328 0.0122028 72.433 52.594 72.433 1 T YQFGYRKFDGVEGPRTPKYMNNITYYFDNVS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX KFDGVEGPRT(1)PK KFDGVEGPRT(72.43)PK 10 4 0.4585 20280 0 0 12365 0 0 20581 0 0 11987 0 0 11178 0 0 20362 0 0 9530.8 0 0 13266 0 0 12882 0 0 1779.1 0 0 19191 0 0 11678 0 0 20588 0 0 12465 0 0 11879 0 0 19950 0 0 9872.4 0 0 13636 0 0 12569 0 0 1982.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29144000 29144000 0 0 NaN 4629 1273 376 376 2054 2173 2341 2608 2341 2608 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11741 2341 2608 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11741 2341 2608 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11741 Q6PKG0 785 Q6PKG0 Q6PKG0 La-related protein 1 LARP1 sp|Q6PKG0|LARP1_HUMAN La-related protein 1 OS=Homo sapiens GN=LARP1 PE=1 SV=2 0.795431 5.87955 0.00772226 73.296 46.698 73.296 2 T TVPESPNYRNTRTPRTPRTPQLKDSSQTSRF X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX T(0.208)PRT(0.795)PRT(0.997)PQLK T(-5.88)PRT(5.88)PRT(23.8)PQLK 4 3 0.38141 0 22751 0 0 21440 0 0 22236 0 0 21286 0 0 24297 0 0 21278 0 0 26939 0 0 26320 0 0 22821 0 0 4849.2 0 0 21527 0 0 20253 0 0 22450 0 0 21865 0 0 24568 0 0 21401 0 0 27182 0 0 26352 0 0 22692 0 0 5175.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 72597000 0 72597000 0 NaN 4630 1273 785 785 4841;4842 5166;5167 5506 6124 5506 6124 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9383 5506 6124 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9383 5506 6124 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9383 Q6PKG0 788 Q6PKG0 Q6PKG0 La-related protein 1 LARP1 sp|Q6PKG0|LARP1_HUMAN La-related protein 1 OS=Homo sapiens GN=LARP1 PE=1 SV=2 0.996694 23.7955 0.00772226 73.296 46.698 73.296 1;2 T ESPNYRNTRTPRTPRTPQLKDSSQTSRFYPV X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX T(0.208)PRT(0.795)PRT(0.997)PQLK T(-5.88)PRT(5.88)PRT(23.8)PQLK 7 3 0.38141 25046 22751 0 30823 21440 0 24427 22236 0 29732 21286 0 31136 24297 0 26575 21278 0 29636 26939 0 28544 26320 0 30115 22821 0 16834 4849.2 0 23698 21527 0 29112 20253 0 24711 22450 0 30544 21865 0 31180 24568 0 26835 21401 0 30252 27182 0 29062 26352 0 29694 22692 0 16511 5175.2 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 91612000 19014000 72597000 0 NaN 4631 1273 788 788 4841;4842 5166;5167 5505;5506 6123;6124 5506 6124 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9383 5506 6124 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9383 5506 6124 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9383 Q6WKZ4 281 Q6WKZ4 Q6WKZ4 Rab11 family-interacting protein 1 RAB11FIP1 sp|Q6WKZ4|RFIP1_HUMAN Rab11 family-interacting protein 1 OS=Homo sapiens GN=RAB11FIP1 PE=1 SV=3 0.644449 2.6026 0.00155319 119.62 40.682 119.62 1 T SSSASDVMSHKRTASTDLKQLNQVNFTLPKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX T(0.002)AS(0.354)T(0.644)DLK T(-26.02)AS(-2.6)T(2.6)DLK 4 2 -0.011907 70875 0 0 56603 0 0 72876 0 0 52513 0 0 20109 0 0 72593 0 0 16194 0 0 46608 0 0 62674 0 0 7610.6 0 0 67073 0 0 53447 0 0 72613 0 0 54491 0 0 23510 0 0 71556 0 0 17945 0 0 47987 0 0 59869 0 0 8245 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 87086000 87086000 0 0 NaN 4632 1286 281 281 4640 4951 5274 5860 5274 5860 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10302 5274 5860 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10302 5274 5860 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10302 Q6ZMZ3 770 Q6ZMZ3 Q6ZMZ3 Nesprin-3 SYNE3 sp|Q6ZMZ3|SYNE3_HUMAN Nesprin-3 OS=Homo sapiens GN=SYNE3 PE=1 SV=2 1 73.2332 0.0183454 73.233 42.621 73.233 1 T HLQRMEVDSGKKMVFTNNIPKSGFLINPMDP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX MVFT(1)NNIPK MVFT(73.23)NNIPK 4 2 -3.4472 29073 0 0 52231 0 0 30418 0 0 50204 0 0 45458 0 0 28417 0 0 47939 0 0 44631 0 0 56138 0 0 15183 0 0 27516 0 0 49329 0 0 30741 0 0 51321 0 0 45286 0 0 29688 0 0 48903 0 0 44598 0 0 55043 0 0 15330 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 143770000 143770000 0 0 NaN 4633 1289 770 770 2759 2927 3137 3485 3137 3485 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10935 3137 3485 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10935 3137 3485 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10935 Q6ZTN6 469 Q6ZTN6 Q6ZTN6 Ankyrin repeat domain-containing protein 13D ANKRD13D sp|Q6ZTN6|AN13D_HUMAN Ankyrin repeat domain-containing protein 13D OS=Homo sapiens GN=ANKRD13D PE=1 SV=2 0.999977 46.4535 0.000178507 102.5 83.292 102.5 2 T LQLSTEPRGPGSPPRTPPAPGPPSFEEQLRL X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPPX GPGS(1)PPRT(1)PPAPGPPSFEEQLR GPGS(67)PPRT(46.45)PPAPGPPS(-46.45)FEEQLR 8 3 -1.773 0 8710.8 0 0 6130.4 0 0 10230 0 0 6985.6 0 0 6383.6 0 0 9682.9 0 0 7074.6 0 0 7276.4 0 0 7279.1 0 0 13753 0 0 8248.3 0 0 5796 0 0 10168 0 0 7163.8 0 0 6715.1 0 0 9581 0 0 7173.8 0 0 7806.5 0 0 7173.6 0 0 13119 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 22758000 0 22758000 0 NaN 4634 1300 469 469 1545 1627 1756 1949 1756 1949 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16529 1756 1949 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16529 1756 1949 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16529 Q76L83 1156 Q76L83 Q76L83 Putative Polycomb group protein ASXL2 ASXL2 sp|Q76L83|ASXL2_HUMAN Putative Polycomb group protein ASXL2 OS=Homo sapiens GN=ASXL2 PE=1 SV=1 0.473774 0 0.00960625 83.652 57.654 83.652 T THSVNPEDRFCLSSPTEALKMGYTDCKNATG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FCLS(0.052)S(0.474)PT(0.474)EALK FCLS(-9.56)S(0)PT(0)EALK 7 2 0.018873 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4635 1313 1156 1156 1242 1307 1408 1560 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20692 1408 1560 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20692 1408 1560 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20692 Q7Z2W4 273 Q7Z2W4 Q7Z2W4 Zinc finger CCCH-type antiviral protein 1 ZC3HAV1 sp|Q7Z2W4|ZCCHV_HUMAN Zinc finger CCCH-type antiviral protein 1 OS=Homo sapiens GN=ZC3HAV1 PE=1 SV=3 0.867993 8.03207 0.0561884 54.281 41.704 54.281 2 T QEFLASASASAERSCTPSPDQISHRASLEDA X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX S(0.161)CT(0.868)PS(0.971)PDQISHR S(-8.03)CT(8.03)PS(14.6)PDQIS(-41.4)HR 3 3 0.29476 0 26231 0 0 6811.4 0 0 26078 0 0 9234.5 0 0 8606.5 0 0 25005 0 0 6514.1 0 0 15099 0 0 6523.8 0 0 2627 0 0 24821 0 0 6448.3 0 0 26050 0 0 9587.2 0 0 9736 0 0 24241 0 0 6731.5 0 0 15609 0 0 6436.6 0 0 2823.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 15415000 0 15415000 0 NaN 4636 1328 273 273 3651 3881;3882 4135 4594 4135 4594 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7574 4135 4594 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7574 4135 4594 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7574 Q7Z309 121 Q7Z309 Q7Z309 Protein FAM122B FAM122B sp|Q7Z309|F122B_HUMAN Protein FAM122B OS=Homo sapiens GN=FAM122B PE=1 SV=2 0.500105 0 0.00394052 89.721 70.114 89.721 2 T PKRIDFTPVSPAPSPTRGFGKMFVSSSGLPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RIDFT(0.005)PVS(0.995)PAPS(0.5)PT(0.5)R RIDFT(-22.87)PVS(22.87)PAPS(0)PT(0)R 14 3 -0.11979 0 11361 0 0 12481 0 0 13020 0 0 13121 0 0 13874 0 0 11984 0 0 12588 0 0 12707 0 0 13208 0 0 12981 0 0 10757 0 0 11794 0 0 13023 0 0 13415 0 0 14011 0 0 12096 0 0 12892 0 0 13109 0 0 13006 0 0 12517 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 22496000 0 22496000 0 NaN 4637 1329 121 121 3271 3470;3471 3708 4118;4119 3708 4118 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15883 3708 4118 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15883 3708 4118 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15883 Q7Z401 1223 Q7Z401 Q7Z401 C-myc promoter-binding protein DENND4A sp|Q7Z401|MYCPP_HUMAN C-myc promoter-binding protein OS=Homo sapiens GN=DENND4A PE=1 SV=2 0.813847 6.40674 0.00184118 103.88 43.05 103.88 1 T IVMYMNNMSSPLTSRTPSIDLQRACDDKLNK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX T(0.814)PS(0.186)IDLQR T(6.41)PS(-6.41)IDLQR 1 2 0.49026 23168 0 0 13739 0 0 23072 0 0 15992 0 0 15492 0 0 21382 0 0 14695 0 0 16927 0 0 14919 0 0 5490.7 0 0 21923 0 0 12991 0 0 23143 0 0 16369 0 0 16157 0 0 21146 0 0 15003 0 0 17317 0 0 14711 0 0 5561.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26067000 26067000 0 0 NaN 4638 1333 1223 1223 4846 5171 5510 6128 5510 6128 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12953 5510 6128 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12953 5510 6128 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12953 Q7Z417 571 Q7Z417 Q7Z417 Nuclear fragile X mental retardation-interacting protein 2 NUFIP2 sp|Q7Z417|NUFP2_HUMAN Nuclear fragile X mental retardation-interacting protein 2 OS=Homo sapiens GN=NUFIP2 PE=1 SV=1 0.598053 1.72571 8.05082E-07 154.31 94.116 154.31 1 T TEHPVFPKAYELEKRTSPQVLGSILKSGTTS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPXXXXX RT(0.598)S(0.402)PQVLGSILK RT(1.73)S(-1.73)PQVLGS(-65)ILK 2 3 0.04781 9984.1 0 0 11834 0 0 10908 0 0 11103 0 0 10440 0 0 10235 0 0 10412 0 0 11136 0 0 12999 0 0 4104.3 0 0 9451 0 0 11175 0 0 10925 0 0 11431 0 0 10624 0 0 10317 0 0 10670 0 0 11259 0 0 12716 0 0 4122.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 128060000 128060000 0 0 NaN 4639 1335 571 571 3536;4941 3753;5266 3999 4439 3999 4439 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18286 3999 4439 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18286 3999 4439 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18286 Q7Z4H7 584 Q7Z4H7 Q7Z4H7 HAUS augmin-like complex subunit 6 HAUS6 sp|Q7Z4H7|HAUS6_HUMAN HAUS augmin-like complex subunit 6 OS=Homo sapiens GN=HAUS6 PE=1 SV=2 1 79.617 6.6996E-08 174.82 139.91 174.82 1 T SLGSNPFLTRNQIPRTPENLITEIRSSWRKA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPXXXXXX NQIPRT(1)PENLITEIR NQIPRT(79.62)PENLIT(-79.62)EIR 6 3 0.25454 7800 0 0 7890 0 0 7530.5 0 0 8371.9 0 0 7453.5 0 0 6688.5 0 0 7053.2 0 0 7739.8 0 0 8702.6 0 0 8275.9 0 0 7379.8 0 0 7456.2 0 0 7596.6 0 0 8539.6 0 0 7564.2 0 0 6808.1 0 0 7243.9 0 0 7972.2 0 0 8516.9 0 0 7971.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17859000 17859000 0 0 NaN 4640 1340 584 584 2892 3066 3284 3641 3284 3641 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18374 3284 3641 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18374 3284 3641 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18374 Q7Z5H3 393 Q7Z5H3 Q7Z5H3 Rho GTPase-activating protein 22 ARHGAP22 sp|Q7Z5H3|RHG22_HUMAN Rho GTPase-activating protein 22 OS=Homo sapiens GN=ARHGAP22 PE=1 SV=1 0.34057 0 9.93674E-05 126.25 97.52 126.25 T DSQGEPGGPGLPAHRTSSLDGAAVAVLSRTA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPXX T(0.341)S(0.341)S(0.319)LDGAAVAVLSR T(0)S(0)S(-0.29)LDGAAVAVLS(-121.86)R 1 3 -0.12127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4641 1347 393 393 4960 5288 5631 6258 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19465 5631 6258 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19465 5631 6258 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19465 Q86TB9 194 Q86TB9 Q86TB9 Protein PAT1 homolog 1 PATL1 sp|Q86TB9|PATL1_HUMAN Protein PAT1 homolog 1 OS=Homo sapiens GN=PATL1 PE=1 SV=2 1 73.7813 0.0135671 73.781 34.999 73.781 1 T SPIIGSPPVRAVPIGTPPKQMAVPSFTQQIL Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX AVPIGT(1)PPK AVPIGT(73.78)PPK 6 3 -0.46162 15588 0 0 11527 0 0 15071 0 0 12553 0 0 12490 0 0 14669 0 0 12769 0 0 14000 0 0 13821 0 0 2578.9 0 0 14749 0 0 10895 0 0 15174 0 0 12860 0 0 12832 0 0 14605 0 0 13013 0 0 14146 0 0 13592 0 0 2752.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 4727900 4727900 0 0 NaN 4642 1361 194 194 559 596 637 711 637 711 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14707 637 711 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14707 637 711 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14707 Q86TB9 178 Q86TB9 Q86TB9 Protein PAT1 homolog 1 PATL1 sp|Q86TB9|PATL1_HUMAN Protein PAT1 homolog 1 OS=Homo sapiens GN=PATL1 PE=1 SV=2 0.457191 0 0.000310051 119.05 98.921 119.05 T EDDRDLSERALPRRSTSPIIGSPPVRAVPIG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX RS(0.086)T(0.457)S(0.457)PIIGSPPVR RS(-7.28)T(0)S(0)PIIGS(-52.94)PPVR 3 3 -0.40699 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4643 1361 178 178 3512;4524 3729;4823 3975 4414 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11388 3975 4414 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11388 3975 4414 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11388 Q86U70 306 Q86U70 Q86U70 LIM domain-binding protein 1 LDB1 sp|Q86U70|LDB1_HUMAN LIM domain-binding protein 1 OS=Homo sapiens GN=LDB1 PE=1 SV=2 0.411175 0 5.29537E-08 156.7 140.76 156.7 T QQPSKRRKRKMSGGSTMSSGGGNTNNSNSKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KMS(0.118)GGS(0.411)T(0.411)MS(0.057)S(0.003)GGGNTNNSNSK KMS(-5.42)GGS(0)T(0)MS(-8.6)S(-21.79)GGGNT(-89.91)NNS(-129.09)NS(-140.61)K 7 3 -1.7399 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4644 1366 306 306 2140;2743 2261;2262;2909 2435 2712 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7147 2435 2712 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7147 2435 2712 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7147 Q86VM9 851 Q86VM9 Q86VM9 Zinc finger CCCH domain-containing protein 18 ZC3H18 sp|Q86VM9|ZCH18_HUMAN Zinc finger CCCH domain-containing protein 18 OS=Homo sapiens GN=ZC3H18 PE=1 SV=2 0.5 0 0.00191873 113.1 65.227 113.1 1 T SDKDRQSPPPAKRPNTSPDRGSRDRKSGGRL X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX RPNT(0.5)S(0.5)PDR RPNT(0)S(0)PDR 4 2 -0.15616 2390.9 0 0 4382.6 0 0 2411 0 0 5142.1 0 0 3903.9 0 0 2325 0 0 3722.7 0 0 4157.3 0 0 5025.4 0 0 985.01 0 0 2262.5 0 0 4144.4 0 0 2444.5 0 0 5188.1 0 0 3872.2 0 0 2481 0 0 3833.7 0 0 4128.7 0 0 4903.3 0 0 1023.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 28054000 28054000 0 0 NaN 4645 1380 851 851 3395 3607 3847 4272 3847 4272 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4885 3847 4272 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4885 3847 4272 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 4885 Q86VP3 436 Q86VP3 Q86VP3 Phosphofurin acidic cluster sorting protein 2 PACS2 sp|Q86VP3|PACS2_HUMAN Phosphofurin acidic cluster sorting protein 2 OS=Homo sapiens GN=PACS2 PE=1 SV=3 0.441057 0 0.0260973 76.282 27.222 76.282 T STRSEGKQAGRRGRSTSLKERQAARPQNERA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPXXXXXXXXXX S(0.118)T(0.441)S(0.441)LKER S(-5.73)T(0)S(0)LKER 2 3 -1.5104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4646 1381 436 436 4520 4819 5134 5702 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7360 5134 5702 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7360 5134 5702 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7360 Q86VQ1 170 Q86VQ1 Q86VQ1 Glucocorticoid-induced transcript 1 protein GLCCI1 sp|Q86VQ1|GLCI1_HUMAN Glucocorticoid-induced transcript 1 protein OS=Homo sapiens GN=GLCCI1 PE=1 SV=1 0.361869 0 2.09302E-10 179.92 151.42 156.67 T KAKSQQVRTSSTIRRTSSLDTITGPYLTGQW X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP T(0.362)S(0.362)S(0.276)LDTITGPYLTGQWPR T(0)S(0)S(-1.17)LDT(-40.79)IT(-85.52)GPY(-123.74)LT(-140.9)GQWPR 1 3 -0.79723 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4647 1382 170 170 3538;4961 3755;5289 5632 6259 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22979 4001 4441 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20493 4001 4441 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20493 Q86WB0 333 Q86WB0 Q86WB0 Nuclear-interacting partner of ALK ZC3HC1 sp|Q86WB0|NIPA_HUMAN Nuclear-interacting partner of ALK OS=Homo sapiens GN=ZC3HC1 PE=1 SV=1 0.657933 2.93837 6.32576E-07 157.42 122.12 157.42 1 T VPESPRRMMTRSQDATFSPGSEQAEKSPGPI X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPXXXXX S(0.008)QDAT(0.658)FS(0.334)PGSEQAEK S(-19.37)QDAT(2.94)FS(-2.94)PGS(-67.75)EQAEK 5 3 0.17664 17196 0 0 20251 0 0 15983 0 0 21224 0 0 17774 0 0 16312 0 0 16990 0 0 18134 0 0 21135 0 0 6536.8 0 0 16267 0 0 19136 0 0 16184 0 0 21654 0 0 17924 0 0 16605 0 0 17445 0 0 18316 0 0 20678 0 0 6574.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16893000 16893000 0 0 NaN 4648 1387 333 333 4216;4217 4494;4495 4789 5315 4789 5315 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11603 4789 5315 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11603 4789 5315 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11603 Q86X10 379 Q86X10 Q86X10 Ral GTPase-activating protein subunit beta RALGAPB sp|Q86X10|RLGPB_HUMAN Ral GTPase-activating protein subunit beta OS=Homo sapiens GN=RALGAPB PE=1 SV=1 0.685129 3.53857 0.0065731 90.174 60.08 90.174 1 T PVNRLSMPQSAAVSTTPPHNRRHRAVTVNKA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPXXXXXXXXXX LSMPQSAAVS(0.012)T(0.303)T(0.685)PPHNR LS(-79.12)MPQS(-65.86)AAVS(-17.74)T(-3.54)T(3.54)PPHNR 12 3 1.9446 8777.1 0 0 10011 0 0 9422.7 0 0 11060 0 0 10026 0 0 9429.7 0 0 9327.4 0 0 9727.5 0 0 11131 0 0 7042.9 0 0 8307.8 0 0 9462.6 0 0 9457 0 0 11266 0 0 10131 0 0 9541.7 0 0 9577.4 0 0 9958 0 0 10907 0 0 6856.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14572000 14572000 0 0 NaN 4649 1393 379 379 2565 2709 2907 3241 2907 3241 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13330 2907 3241 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13330 2907 3241 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13330 Q86YP4 189 Q86YP4 Q86YP4 Transcriptional repressor p66-alpha GATAD2A sp|Q86YP4|P66A_HUMAN Transcriptional repressor p66-alpha OS=Homo sapiens GN=GATAD2A PE=1 SV=1 0.952397 13.0824 4.56884E-05 129.8 107.68 129.8 1 T ATAQKPTGSVGSTVTTPPPLVRGTQNIPAGK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPXXXXXXXXX EATAQKPTGSVGST(0.001)VT(0.047)T(0.952)PPPLVR EAT(-70.25)AQKPT(-56.89)GS(-47.64)VGS(-39.67)T(-31.69)VT(-13.08)T(13.08)PPPLVR 17 3 0.0087736 47349 0 0 55691 0 0 45591 0 0 54633 0 0 43927 0 0 45975 0 0 48453 0 0 54942 0 0 57081 0 0 42922 0 0 44798 0 0 52604 0 0 45997 0 0 56021 0 0 44747 0 0 46663 0 0 49340 0 0 56057 0 0 55955 0 0 41688 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 128930000 128930000 0 0 NaN 4650 1402 189 189 887 940 1018;1019 1125;1126;1127 1019 1126 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14772 1019 1126 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14772 1019 1126 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14772 Q8IV63 58 Q8IV63 Q8IV63 Inactive serine/threonine-protein kinase VRK3 VRK3 sp|Q8IV63|VRK3_HUMAN Inactive serine/threonine-protein kinase VRK3 OS=Homo sapiens GN=VRK3 PE=1 SV=2 0.724223 4.24129 0.0230054 62.035 44.599 62.035 1 T SSFQGSKRGLNSSFETSPKKVKWSSTVTSPR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX GLNS(0.001)S(0.002)FET(0.724)S(0.273)PK GLNS(-31.04)S(-24.67)FET(4.24)S(-4.24)PK 8 3 -1.2373 10990 0 0 11630 0 0 13584 0 0 14520 0 0 7774.2 0 0 12181 0 0 7761.3 0 0 11354 0 0 13120 0 0 2805 0 0 10409 0 0 11003 0 0 13458 0 0 14695 0 0 8237.1 0 0 12309 0 0 8047.7 0 0 11506 0 0 12718 0 0 2904.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25021000 25021000 0 0 NaN 4651 1410 58 58 1506 1585 1714 1896 1714 1896 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14411 1714 1896 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14411 1714 1896 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14411 Q8IWA0 795 Q8IWA0 Q8IWA0 WD repeat-containing protein 75 WDR75 sp|Q8IWA0|WDR75_HUMAN WD repeat-containing protein 75 OS=Homo sapiens GN=WDR75 PE=1 SV=1 0.541368 1.96412 1.43269E-08 158.67 122.96 158.67 1 T EDSDEENDFTEKVQDTSNTGLGEDIIHQLSK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP VQDT(0.541)S(0.344)NT(0.114)GLGEDIIHQLSK VQDT(1.96)S(-1.96)NT(-6.76)GLGEDIIHQLS(-149.21)K 4 3 -0.078924 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4652 1413 795 795 5219 5563 5928 6586 5928 6586 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22418 5928 6586 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22418 5928 6586 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22418 Q8IWB9 197 Q8IWB9 Q8IWB9 Testis-expressed sequence 2 protein TEX2 sp|Q8IWB9|TEX2_HUMAN Testis-expressed sequence 2 protein OS=Homo sapiens GN=TEX2 PE=1 SV=2 0.972305 15.4589 0.00044188 119.68 68.235 119.68 1 T LSSAKPFMSLVKSLSTEVEPKESPHPARHRH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX SLS(0.028)T(0.972)EVEPK S(-44.84)LS(-15.46)T(15.46)EVEPK 4 2 -0.52514 22687 0 0 14388 0 0 22496 0 0 18053 0 0 29510 0 0 20570 0 0 29480 0 0 22762 0 0 18104 0 0 10323 0 0 21467 0 0 13613 0 0 22749 0 0 18353 0 0 29522 0 0 20553 0 0 29698 0 0 23058 0 0 18346 0 0 10248 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 56004000 56004000 0 0 NaN 4653 1414 197 197 4006 4271 4559 5067 4559 5067 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13576 4559 5067 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13576 4559 5067 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13576 Q8IWV7 21 Q8IWV7 Q8IWV7 E3 ubiquitin-protein ligase UBR1 UBR1 sp|Q8IWV7|UBR1_HUMAN E3 ubiquitin-protein ligase UBR1 OS=Homo sapiens GN=UBR1 PE=1 SV=1 0.999985 48.1907 0.0127245 78.249 63.277 78.249 1 T AGGTERMEISAELPQTPQRLASWWDQQVDFY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX MEISAELPQT(1)PQR MEIS(-48.19)AELPQT(48.19)PQR 10 3 0.58757 5341.8 0 0 5282 0 0 6887.7 0 0 5345.5 0 0 6036.8 0 0 5552.2 0 0 5474.3 0 0 6002.4 0 0 6470.5 0 0 4209 0 0 5060.5 0 0 4990 0 0 6835.2 0 0 5488 0 0 6169.4 0 0 5569.6 0 0 5626.6 0 0 6130.2 0 0 6342.2 0 0 4102.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17933000 17933000 0 0 NaN 4654 1417 21 21 2682 2837 3044 3390 3044 3390 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16321 3044 3390 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16321 3044 3390 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16321 Q8IWY9 71 Q8IWY9 Q8IWY9 Codanin-1 CDAN1 sp|Q8IWY9|CDAN1_HUMAN Codanin-1 OS=Homo sapiens GN=CDAN1 PE=1 SV=4 1 110.775 0.000207583 110.77 57.985 110.77 1 T FLREQSSRVLPQGPPTPAKTPGASAALPGRP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX VLPQGPPT(1)PAK VLPQGPPT(110.77)PAK 8 3 0.25436 9588.5 0 0 12482 0 0 10316 0 0 10072 0 0 7519 0 0 9049.5 0 0 6838.5 0 0 9886.5 0 0 10384 0 0 1547.5 0 0 9075.9 0 0 11778 0 0 10311 0 0 10473 0 0 7789.2 0 0 9129.8 0 0 7090.8 0 0 9931.1 0 0 10096 0 0 1685.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 52263000 52263000 0 0 NaN 4655 1419 71 71 5168 5507 5869 6523 5869 6523 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15088 5869 6523 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15088 5869 6523 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15088 Q8IX15 451 Q8IX15 Q8IX15 Homeobox and leucine zipper protein Homez HOMEZ sp|Q8IX15|HOMEZ_HUMAN Homeobox and leucine zipper protein Homez OS=Homo sapiens GN=HOMEZ PE=1 SV=2 1 88.2391 0.00782832 88.239 76.969 88.239 1 T PTPPPSTRSLNERAETPPLPIPPPPPDIQPL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP AET(1)PPLPIPPPPPDIQPLER AET(88.24)PPLPIPPPPPDIQPLER 3 3 -0.033178 1991.2 0 0 3358.4 0 0 2540.1 0 0 2965.7 0 0 3144.6 0 0 2556.2 0 0 3150 0 0 2883.5 0 0 3233.5 0 0 15411 0 0 1886.2 0 0 3170.3 0 0 2533.6 0 0 3062.5 0 0 3155.6 0 0 2613.6 0 0 3208.4 0 0 3344.1 0 0 3186.9 0 0 14578 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8595500 8595500 0 0 NaN 4656 1422 451 451 167 175 188 212 188 212 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22582 188 212 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22582 188 212 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22582 Q8IY67 463 Q8IY67 Q8IY67 Ribonucleoprotein PTB-binding 1 RAVER1 sp|Q8IY67|RAVR1_HUMAN Ribonucleoprotein PTB-binding 1 OS=Homo sapiens GN=RAVER1 PE=1 SV=1 1 60.9505 4.72333E-17 238.72 219.68 60.95 1 T GDREALGLGPPAAQLTPPPAPVGLRGSGLRG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPPXXXXXX EALGLGPPAAQLT(1)PPPAPVGLR EALGLGPPAAQLT(60.95)PPPAPVGLR 13 3 1.3509 43792 0 0 51804 0 0 48979 0 0 61166 0 0 26134 0 0 44437 0 0 26422 0 0 38463 0 0 63485 0 0 31763 0 0 41458 0 0 48991 0 0 48741 0 0 61963 0 0 27909 0 0 45273 0 0 27896 0 0 39770 0 0 61068 0 0 30799 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 465680000 465680000 0 0 NaN 4657 1434 463 463 877 930 1007;1008 1113;1114;1115 1008 1115 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21855 1007 1114 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21613 1007 1114 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21613 Q8IYB3 846 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 1 77.7818 2.03538E-06 137.57 123.42 137.57 1 T HKKEKAVAAAAAAAVTPAAIAAATTTLAQEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPPPPPPP AVAAAAAAAVT(1)PAAIAAATTTLAQEEPVAAPEPK AVAAAAAAAVT(77.78)PAAIAAAT(-77.78)T(-79.01)T(-79.01)LAQEEPVAAPEPK 11 4 0.47584 14675 0 0 14449 0 0 14296 0 0 16460 0 0 15094 0 0 15384 0 0 12862 0 0 27354 0 0 17309 0 0 330530 0 0 13885 0 0 13661 0 0 14423 0 0 16760 0 0 15243 0 0 16241 0 0 13321 0 0 36934 0 0 16890 0 0 311860 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 46883000 46883000 0 0 NaN 4658 1436 846 846 548 584 625 698 625 698 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23553 625 698 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23553 625 698 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23553 Q8IYB3 220 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 1 71.4978 0.00011022 115.73 92.492 90.697 1 T TKSRSPSPAPEKKEKTPELPEPSVKVKEPSV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX T(1)PELPEPSVK T(71.5)PELPEPS(-71.5)VK 1 3 0.2663 45250 0 0 50983 0 0 46398 0 0 51864 0 0 48766 0 0 50884 0 0 53180 0 0 51939 0 0 50866 0 0 17842 0 0 42822 0 0 48167 0 0 46691 0 0 53183 0 0 49408 0 0 51094 0 0 53857 0 0 52595 0 0 50288 0 0 18003 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 1020700000 1020700000 0 0 NaN 4659 1436 220 220 1020;4824 1076;5148 1163;1164;5487 1281;1282;1283;6105 5487 6105 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15777 1164 1282 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14913 1163 1281 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14715 Q8IYB3 406 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 1 61.1023 0.000269281 113.86 95.111 61.102 2 T SASPPRRRHRPSPPATPPPKTRHSPTPQQSN X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX HRPS(1)PPAT(1)PPPK HRPS(61.1)PPAT(61.1)PPPK 8 4 0.19442 0 159820 0 0 182680 0 0 167330 0 0 168160 0 0 198090 0 0 180170 0 0 193850 0 0 181430 0 0 205420 0 0 10450 0 0 151260 0 0 172480 0 0 168430 0 0 173740 0 0 199160 0 0 180090 0 0 197840 0 0 182260 0 0 202200 0 0 14038 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 1213000000 0 1213000000 0 NaN 4660 1436 406 406 1740 1835 1980;1981 2206;2207;2208 1981 2208 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7665 1980 2207 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7859 1980 2207 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7859 Q8IYB3 614 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 1 100.552 0.000299064 110.04 83.92 100.55 1;2 T PIQRRYSPSPPPKRRTASPPPPPKRRASPSP X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX T(1)AS(1)PPPPPKR T(100.55)AS(100.55)PPPPPKR 1 3 -0.061559 12598 127030 0 10861 133710 0 11271 133040 0 11552 138750 0 13540 128750 0 13717 126700 0 13136 119740 0 13938 131180 0 12211 155620 0 1964.1 19778 0 11916 120220 0 10264 126340 0 11452 133550 0 11854 141970 0 13599 130820 0 13659 127630 0 13365 123300 0 14031 132000 0 12088 152030 0 2172 21659 0 1 6 0 1 6 0 1 6 0 1 6 0 1 6 0 1 6 0 1 6 0 1 6 0 1 6 0 1 6 0 206610000 29734000 176880000 0 NaN 4661 1436 614 614 3457;3516;4637;4638 3673;3733;4946;4947;4948;4949 3919;3979;5268;5269;5271 4354;4418;5851;5852;5853;5855;5856 5271 5856 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7326 3919 4354 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6708 3919 4354 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6708 Q8IYB3 581 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 1 80.9595 0.0143267 80.96 66.273 80.96 2 T PPRRRRTPTPPPRRRTPSPPPRRRSPSPRRY X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX RRT(1)PS(1)PPPR RRT(80.96)PS(80.96)PPPR 3 3 -0.01572 0 39101 0 0 43995 0 0 37816 0 0 38544 0 0 44337 0 0 38408 0 0 48884 0 0 37574 0 0 46235 0 0 8251.8 0 0 36995 0 0 41529 0 0 38241 0 0 39907 0 0 44670 0 0 38510 0 0 49469 0 0 37971 0 0 45733 0 0 8639.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 82374000 0 82374000 0 NaN 4662 1436 581 581 3459 3675 3921 4356 3921 4356 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5076 3921 4356 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5076 3921 4356 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5076 Q8IYB3 572 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 1 83.214 0.00498157 83.214 46.754 83.214 2 T RRRSPSPAPPPRRRRTPTPPPRRRTPSPPPR X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX RRT(1)PT(1)PPPR RRT(83.21)PT(83.21)PPPR 3 3 -0.3832 0 14720 0 0 16826 0 0 15633 0 0 17213 0 0 19810 0 0 16332 0 0 18766 0 0 17375 0 0 16956 0 0 3517 0 0 13933 0 0 15897 0 0 15738 0 0 17636 0 0 19840 0 0 16429 0 0 19103 0 0 17494 0 0 16807 0 0 3713.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 53185000 0 53185000 0 NaN 4663 1436 572 572 3460 3676 3922 4357 3922 4357 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5124 3922 4357 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5124 3922 4357 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5124 Q8IYB3 574 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 1 83.214 0.00498157 83.214 46.754 83.214 2 T RSPSPAPPPRRRRTPTPPPRRRTPSPPPRRR X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX RRT(1)PT(1)PPPR RRT(83.21)PT(83.21)PPPR 5 3 -0.3832 0 14720 0 0 16826 0 0 15633 0 0 17213 0 0 19810 0 0 16332 0 0 18766 0 0 17375 0 0 16956 0 0 3517 0 0 13933 0 0 15897 0 0 15738 0 0 17636 0 0 19840 0 0 16429 0 0 19103 0 0 17494 0 0 16807 0 0 3713.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 53185000 0 53185000 0 NaN 4664 1436 574 574 3460 3676 3922 4357 3922 4357 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5124 3922 4357 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5124 3922 4357 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5124 Q8IYB3 727 Q8IYB3 Q8IYB3 Serine/arginine repetitive matrix protein 1 SRRM1 sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2 1 96.8656 0.00385893 96.866 66.137 96.866 1;2 T QSPSPSTRPIRRVSRTPEPKKIKKAASPSPQ X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX RVS(1)RT(1)PEPK RVS(96.87)RT(96.87)PEPK 5 3 -0.67427 18808 137070 0 30205 131760 0 19602 140870 0 29984 128420 0 21433 141610 0 18251 133830 0 20313 148570 0 22171 131110 0 28997 138910 0 2662.2 6857.8 0 17800 129710 0 28533 124450 0 19713 141650 0 30611 132150 0 21635 143750 0 18872 133890 0 20969 150630 0 22168 131820 0 28243 137470 0 3019.9 9491.7 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1 3 0 1046500000 120610000 925910000 0 NaN 4665 1436 727 727 3559;5271 3778;3779;5617 4027;4028;5988 4473;4474;4475;6653 4028 4474 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6716 4028 4474 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6716 4028 4474 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6716 Q8IZ21 358 Q8IZ21 Q8IZ21 Phosphatase and actin regulator 4 PHACTR4 sp|Q8IZ21|PHAR4_HUMAN Phosphatase and actin regulator 4 OS=Homo sapiens GN=PHACTR4 PE=1 SV=1 1 92.3649 2.40433E-12 188.8 169.27 188.8 2 T PSPPLPTHIPPEPPRTPPFPAKTFQVVPEIE X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPXXXXXXXXX S(0.4)PS(0.6)PPLPTHIPPEPPRT(1)PPFPAK S(-1.77)PS(1.77)PPLPT(-55.34)HIPPEPPRT(92.36)PPFPAK 17 4 0.53335 0 25959 0 0 33581 0 0 28253 0 0 39682 0 0 35401 0 0 28625 0 0 34175 0 0 36579 0 0 38298 0 0 138850 0 0 24572 0 0 31758 0 0 28403 0 0 40194 0 0 35490 0 0 29547 0 0 34959 0 0 40566 0 0 37614 0 0 131590 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 0 5 0 32582000 0 32582000 0 NaN 4666 1439 358 358 4189 4464 4758 5279;5280;5281;5282;5283 4758 5283 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19400 4758 5283 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19400 4758 5283 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19400 Q8IZ21 462 Q8IZ21 Q8IZ21 Phosphatase and actin regulator 4 PHACTR4 sp|Q8IZ21|PHAR4_HUMAN Phosphatase and actin regulator 4 OS=Homo sapiens GN=PHACTR4 PE=1 SV=1 0.755995 4.91122 7.98111E-07 147.17 108.53 147.17 1 T ENSDSFSEDSSTLGRTRSLPITIEMLKVPDD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX T(0.756)RS(0.244)LPITIEMLK T(4.91)RS(-4.91)LPIT(-60.4)IEMLK 1 3 -0.39077 6420.4 0 0 2758.9 0 0 7489.1 0 0 3279.8 0 0 10458 0 0 5743.1 0 0 11113 0 0 7100.1 0 0 3905.6 0 0 7012.5 0 0 6079.3 0 0 2609.2 0 0 7517.2 0 0 3375.4 0 0 10440 0 0 5676.9 0 0 11083 0 0 7280.6 0 0 4159.4 0 0 6767.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27833000 27833000 0 0 NaN 4667 1439 462 462 4900 5225 5566 6187 5566 6187 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21954 5566 6187 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21954 5566 6187 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21954 Q8IZL8 745 Q8IZL8 Q8IZL8 Proline-, glutamic acid- and leucine-rich protein 1 PELP1 sp|Q8IZL8|PELP1_HUMAN Proline-, glutamic acid- and leucine-rich protein 1 OS=Homo sapiens GN=PELP1 PE=1 SV=2 0.99755 26.1128 1.1112E-07 164.39 155.31 164.39 1 T HRAGSNEDPILAPSGTPPPTIPPDETFGGRV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPPPPPPPPPPX AGSNEDPILAPS(0.002)GT(0.998)PPPTIPPDETFGGR AGS(-105.48)NEDPILAPS(-26.11)GT(26.11)PPPT(-50.86)IPPDET(-90.89)FGGR 14 3 0.34066 16470 0 0 20550 0 0 17012 0 0 16401 0 0 18422 0 0 19526 0 0 16365 0 0 21133 0 0 19431 0 0 78520 0 0 15587 0 0 19389 0 0 17112 0 0 17144 0 0 18586 0 0 19601 0 0 16841 0 0 23501 0 0 19043 0 0 74425 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 4 0 0 73121000 73121000 0 0 NaN 4668 1444 745 745 224 238 256 284;285;286;287 256 285 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19279 256 285 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19279 256 285 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19279 Q8N0Z3 235 Q8N0Z3 Q8N0Z3 Spindle and centriole-associated protein 1 SPICE1 sp|Q8N0Z3|SPICE_HUMAN Spindle and centriole-associated protein 1 OS=Homo sapiens GN=SPICE1 PE=1 SV=1 0.995337 23.6305 0.000116113 101.74 85.514 101.74 1 T LWTDIQQKIATQSQITPPGTPSSALSSGEQR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPPP IATQS(0.004)QIT(0.995)PPGTPSSALSSGEQR IAT(-35.84)QS(-23.63)QIT(23.63)PPGT(-40.55)PS(-59.27)S(-63.39)ALS(-73.79)S(-77.07)GEQR 8 3 1.7557 4851.4 0 0 7925 0 0 7196.6 0 0 7646.7 0 0 8359.2 0 0 6702 0 0 7661.1 0 0 6336.3 0 0 7563.4 0 0 13996 0 0 4599.5 0 0 7484.9 0 0 7124.6 0 0 7853.2 0 0 8404.3 0 0 6781.7 0 0 7829.2 0 0 6791.7 0 0 7467 0 0 13325 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10524000 10524000 0 0 NaN 4669 1448 235 235 1781 1880 2027 2258 2027 2258 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14955 2027 2258 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14955 2027 2258 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14955 Q8N1F7 47 Q8N1F7 Q8N1F7 Nuclear pore complex protein Nup93 NUP93 sp|Q8N1F7|NUP93_HUMAN Nuclear pore complex protein Nup93 OS=Homo sapiens GN=NUP93 PE=1 SV=2 0.420699 1.93595 0.0243911 74.12 50.288 74.12 T NLQEIQQAGERLRSRTLTRTSQETADVKASV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX T(0.421)LT(0.269)RT(0.176)S(0.134)QETADVK T(1.94)LT(-1.94)RT(-3.78)S(-4.97)QET(-48.61)ADVK 1 3 -0.74654 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4670 1453 47 47 4797 5117 5456 6072 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10371 5456 6072 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10371 5456 6072 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10371 Q8N1F7 51 Q8N1F7 Q8N1F7 Nuclear pore complex protein Nup93 NUP93 sp|Q8N1F7|NUP93_HUMAN Nuclear pore complex protein Nup93 OS=Homo sapiens GN=NUP93 PE=1 SV=2 0.991052 20.4503 8.33136E-05 135.5 95.88 135.5 1 T IQQAGERLRSRTLTRTSQETADVKASVLLGS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX T(0.991)S(0.009)QETADVK T(20.45)S(-20.45)QET(-48.66)ADVK 1 2 0.10561 38239 0 0 33630 0 0 36727 0 0 31008 0 0 41862 0 0 37305 0 0 38165 0 0 35897 0 0 35516 0 0 5794.1 0 0 36178 0 0 31754 0 0 37125 0 0 32100 0 0 42123 0 0 37105 0 0 38954 0 0 36236 0 0 35156 0 0 6286.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 35787000 35787000 0 0 NaN 4671 1453 51 51 4797;4948 5117;5276 5619 6245 5619 6245 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9140 5619 6245 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9140 5619 6245 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9140 Q8N1G0 377 Q8N1G0 Q8N1G0 Zinc finger protein 687 ZNF687 sp|Q8N1G0|ZN687_HUMAN Zinc finger protein 687 OS=Homo sapiens GN=ZNF687 PE=1 SV=1 0.974356 17.026 0.000177046 111.12 80.678 111.12 1 T GAFLAEASLLKLSPATPTSEGPKVVSVQLGD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX LS(0.019)PAT(0.974)PT(0.006)SEGPK LS(-17.03)PAT(17.03)PT(-21.89)S(-51.51)EGPK 5 3 -3.2727 8827.8 0 0 10638 0 0 8389.4 0 0 11915 0 0 10595 0 0 9379.9 0 0 10024 0 0 9136.7 0 0 11613 0 0 3647.7 0 0 8351.8 0 0 10057 0 0 8498.8 0 0 12115 0 0 10615 0 0 9518.9 0 0 10274 0 0 9284.1 0 0 11392 0 0 3646.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6804000 6804000 0 0 NaN 4672 1455 377 377 2567 2711 2909 3243 2909 3243 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12490 2909 3243 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12490 2909 3243 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12490 Q8N201 83 Q8N201 Q8N201 Integrator complex subunit 1 INTS1 sp|Q8N201|INT1_HUMAN Integrator complex subunit 1 OS=Homo sapiens GN=INTS1 PE=1 SV=2 0.499379 0 1.29849E-22 258.56 210.75 258.56 T ASALTGLTKRPKLSSTPPLSALGRLAEAAVA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LS(0.001)S(0.499)T(0.499)PPLSALGR LS(-26.04)S(0)T(0)PPLS(-74.13)ALGR 4 2 0.68789 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4673 1458 83 83 2601 2747 2946 3283 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18292 2946 3283 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18292 2946 3283 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18292 Q8N3D4 284 Q8N3D4 Q8N3D4 EH domain-binding protein 1-like protein 1 EHBP1L1 sp|Q8N3D4|EH1L1_HUMAN EH domain-binding protein 1-like protein 1 OS=Homo sapiens GN=EHBP1L1 PE=1 SV=2 0.5 0 3.55254E-12 198.73 178.53 198.73 1 T EAGGQVGPEAPRPPETSPEMRSSRQPAQDTA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPXXXXXXXXXX ANEAGGQVGPEAPRPPET(0.5)S(0.5)PEMR ANEAGGQVGPEAPRPPET(0)S(0)PEMR 18 3 0.28642 9163.6 0 0 12462 0 0 9936.8 0 0 11535 0 0 10371 0 0 9547.9 0 0 11330 0 0 10484 0 0 12628 0 0 5016.4 0 0 8674 0 0 11767 0 0 9968.5 0 0 11869 0 0 10514 0 0 9680.3 0 0 11523 0 0 10631 0 0 12405 0 0 4966.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27282000 27282000 0 0 NaN 4674 1461 284 284 342 368 397 438 397 438 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11067 397 438 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11067 397 438 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11067 Q8N3D4 726 Q8N3D4 Q8N3D4 EH domain-binding protein 1-like protein 1 EHBP1L1 sp|Q8N3D4|EH1L1_HUMAN EH domain-binding protein 1-like protein 1 OS=Homo sapiens GN=EHBP1L1 PE=1 SV=2 1 47.0374 0.038 47.037 24.152 47.037 2 T VPESEAEGTEAKILGTQEITARDSGVREIEA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX ILGT(1)QEIT(1)AR ILGT(47.04)QEIT(47.04)AR 4 3 3.2033 0 3163.3 0 0 3717.6 0 0 3635.8 0 0 3485.7 0 0 1683.2 0 0 4224.3 0 0 2285.2 0 0 3173.8 0 0 3333.3 0 0 1544.4 0 0 2995.1 0 0 3510.5 0 0 3611.1 0 0 3605 0 0 1832.9 0 0 4191 0 0 2325.9 0 0 3270.8 0 0 3244.5 0 0 1527.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 21211000 0 21211000 0 NaN 4675 1461 726 726 1882 1986 2144 2403 2144 2403 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20724 2144 2403 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20724 2144 2403 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20724 Q8N3D4 730 Q8N3D4 Q8N3D4 EH domain-binding protein 1-like protein 1 EHBP1L1 sp|Q8N3D4|EH1L1_HUMAN EH domain-binding protein 1-like protein 1 OS=Homo sapiens GN=EHBP1L1 PE=1 SV=2 1 47.0374 0.038 47.037 24.152 47.037 2 T EAEGTEAKILGTQEITARDSGVREIEAEIAE X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPXXXXXXXXXXXXX ILGT(1)QEIT(1)AR ILGT(47.04)QEIT(47.04)AR 8 3 3.2033 0 3163.3 0 0 3717.6 0 0 3635.8 0 0 3485.7 0 0 1683.2 0 0 4224.3 0 0 2285.2 0 0 3173.8 0 0 3333.3 0 0 1544.4 0 0 2995.1 0 0 3510.5 0 0 3611.1 0 0 3605 0 0 1832.9 0 0 4191 0 0 2325.9 0 0 3270.8 0 0 3244.5 0 0 1527.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 21211000 0 21211000 0 NaN 4676 1461 730 730 1882 1986 2144 2403 2144 2403 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20724 2144 2403 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20724 2144 2403 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20724 Q8N3U4 1112 Q8N3U4 Q8N3U4 Cohesin subunit SA-2 STAG2 sp|Q8N3U4|STAG2_HUMAN Cohesin subunit SA-2 OS=Homo sapiens GN=STAG2 PE=1 SV=3 0.993087 21.5953 0.00375713 95.212 76.964 95.212 1 T SSSDSMWLSREQTLHTPVMMQTPQLTSTIMR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP EQT(0.007)LHT(0.993)PVMMQTPQLTSTIMR EQT(-21.6)LHT(21.6)PVMMQT(-44.67)PQLT(-61.38)S(-66.79)T(-66.09)IMR 6 3 -1.6305 4007.9 0 0 5872.7 0 0 4097.6 0 0 6404.6 0 0 5398.8 0 0 5144.8 0 0 5347.9 0 0 6182.1 0 0 6223.3 0 0 43815 0 0 3792.9 0 0 5550.8 0 0 4136.8 0 0 6523.4 0 0 5402 0 0 5308.6 0 0 5470.1 0 0 7481.1 0 0 6103.4 0 0 41400 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17732000 17732000 0 0 NaN 4677 1463 1112 1112 1107 1166 1255 1379 1255 1379 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19787 1255 1379 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19787 1255 1379 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19787 Q8N456 138 Q8N456 Q8N456 Leucine-rich repeat-containing protein 18 LRRC18 sp|Q8N456|LRC18_HUMAN Leucine-rich repeat-containing protein 18 OS=Homo sapiens GN=LRRC18 PE=2 SV=2 0.666667 0 0.0410164 48.848 22.7 48.848 2 T IRAVNLGLNHLDSVPTTLGALKELHEVGLHD X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPPXXXXXXXXX AVNLGLNHLDS(0.667)VPT(0.667)T(0.667)LGALK AVNLGLNHLDS(0)VPT(0)T(0)LGALK 14 4 -1.2656 0 5237.6 0 0 5965.7 0 0 5823.9 0 0 5727.4 0 0 4998.5 0 0 4860.4 0 0 4991.8 0 0 4778.9 0 0 6453.8 0 0 5417.8 0 0 4958.3 0 0 5634.3 0 0 5820.5 0 0 5881.3 0 0 5122.5 0 0 4919.7 0 0 5121.5 0 0 4960 0 0 6306 0 0 5212.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 14925000 0 14925000 0 NaN 4678 1466 138 138 558 595 636 710 636 710 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20770 636 710 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20770 636 710 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20770 Q8N456 139 Q8N456 Q8N456 Leucine-rich repeat-containing protein 18 LRRC18 sp|Q8N456|LRC18_HUMAN Leucine-rich repeat-containing protein 18 OS=Homo sapiens GN=LRRC18 PE=2 SV=2 0.666667 0 0.0410164 48.848 22.7 48.848 2 T RAVNLGLNHLDSVPTTLGALKELHEVGLHDN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AVNLGLNHLDS(0.667)VPT(0.667)T(0.667)LGALK AVNLGLNHLDS(0)VPT(0)T(0)LGALK 15 4 -1.2656 0 5237.6 0 0 5965.7 0 0 5823.9 0 0 5727.4 0 0 4998.5 0 0 4860.4 0 0 4991.8 0 0 4778.9 0 0 6453.8 0 0 5417.8 0 0 4958.3 0 0 5634.3 0 0 5820.5 0 0 5881.3 0 0 5122.5 0 0 4919.7 0 0 5121.5 0 0 4960 0 0 6306 0 0 5212.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 14925000 0 14925000 0 NaN 4679 1466 139 139 558 595 636 710 636 710 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20770 636 710 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20770 636 710 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20770 Q8N573 203 Q8N573 Q8N573 Oxidation resistance protein 1 OXR1 sp|Q8N573|OXR1_HUMAN Oxidation resistance protein 1 OS=Homo sapiens GN=OXR1 PE=1 SV=2 0.48469 0 1.9578E-07 166.96 63.02 166.96 T SSTFTGIRPARVVSSTSEEEEAFTEKFLKIN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VVS(0.017)S(0.485)T(0.485)S(0.014)EEEEAFTEK VVS(-14.63)S(0)T(0)S(-15.41)EEEEAFT(-157.03)EK 5 3 2.1567 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4680 1470 203 203 5312 5660 6036 6708 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16788 6036 6708 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16788 6036 6708 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16788 Q8N6L1 124 Q8N6L1 Q8N6L1 Keratinocyte-associated protein 2 KRTCAP2 sp|Q8N6L1|KTAP2_HUMAN Keratinocyte-associated protein 2 OS=Homo sapiens GN=KRTCAP2 PE=1 SV=2 1 100.577 8.17334E-05 119.16 100.41 119.16 1 T NKISSTLYQAAAPVLTPAKVTGKSKKRN___ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPXXXXXXXXXXXX ISSTLYQAAAPVLT(1)PAK IS(-109.2)S(-109.44)T(-109.67)LY(-100.58)QAAAPVLT(100.58)PAK 14 3 -0.035974 5273.4 0 0 5656.9 0 0 5697.6 0 0 6108.5 0 0 3844.2 0 0 5093.1 0 0 4033.4 0 0 5755.2 0 0 6963.9 0 0 14140 0 0 4991.6 0 0 5346.4 0 0 5690.4 0 0 6228.1 0 0 4016 0 0 5185.3 0 0 4176.8 0 0 6173.3 0 0 6747 0 0 13447 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17729000 17729000 0 0 NaN 4681 1480 124 124 1952 2063 2227 2488 2227 2488 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20784 2227 2488 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20784 2227 2488 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20784 Q8N6T3 135 Q8N6T3 Q8N6T3 ADP-ribosylation factor GTPase-activating protein 1 ARFGAP1 sp|Q8N6T3|ARFG1_HUMAN ADP-ribosylation factor GTPase-activating protein 1 OS=Homo sapiens GN=ARFGAP1 PE=1 SV=2 1 68.3697 2.16685E-05 131.41 116.32 131.41 1 T EGREWSLESSPAQNWTPPQPRTLPSMVHRVS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPXXXXXXXXXX EWSLESSPAQNWT(1)PPQPR EWS(-89.45)LES(-74.17)S(-68.37)PAQNWT(68.37)PPQPR 13 3 0.51236 6063.4 0 0 6972.5 0 0 6272.5 0 0 6820.6 0 0 7163.3 0 0 6960.7 0 0 7495.3 0 0 8991.1 0 0 6693.9 0 0 32079 0 0 5738.3 0 0 6585.8 0 0 6315.5 0 0 7014.7 0 0 7220.6 0 0 7056.7 0 0 7591.6 0 0 9906.7 0 0 6638.9 0 0 30415 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14515000 14515000 0 0 NaN 4682 1481 135 135 1229 1293 1393 1544 1393 1544 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19733 1393 1544 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19733 1393 1544 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19733 Q8N6T3 189 Q8N6T3 Q8N6T3 ADP-ribosylation factor GTPase-activating protein 1 ARFGAP1 sp|Q8N6T3|ARFG1_HUMAN ADP-ribosylation factor GTPase-activating protein 1 OS=Homo sapiens GN=ARFGAP1 PE=1 SV=2 1 72.1703 0.000180396 101.15 87.725 101.15 1 T SYQGAQGNRYVGFGNTPPPQKKEDDFLNNAM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPXXXXXXXXX YVGFGNT(1)PPPQKK Y(-72.17)VGFGNT(72.17)PPPQKK 7 4 0.81843 5405.3 0 0 6049.4 0 0 5372.4 0 0 5675.7 0 0 4355 0 0 4850 0 0 4833.9 0 0 6186 0 0 7429 0 0 1303.8 0 0 5114.6 0 0 5712.5 0 0 5400 0 0 5837.1 0 0 4488.7 0 0 4917.4 0 0 4968.5 0 0 6192.5 0 0 7220.2 0 0 1370.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7482000 7482000 0 0 NaN 4683 1481 189 189 5453 5809 6203 6905 6203 6905 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14642 6203 6905 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14642 6203 6905 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14642 Q8N6T7 294 Q8N6T7 Q8N6T7 NAD-dependent protein deacetylase sirtuin-6 SIRT6 sp|Q8N6T7|SIR6_HUMAN NAD-dependent protein deacetylase sirtuin-6 OS=Homo sapiens GN=SIRT6 PE=1 SV=2 1 122.158 0.00017357 122.16 86.713 122.16 1 T PRVLERALPPLPRPPTPKLEPKEESPTRING X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPXXXXXXXXXXXXX ALPPLPRPPT(1)PK ALPPLPRPPT(122.16)PK 10 3 0.11657 16219 0 0 13249 0 0 16378 0 0 11079 0 0 11675 0 0 16095 0 0 11375 0 0 11605 0 0 13210 0 0 2457.3 0 0 15348 0 0 12504 0 0 16424 0 0 11589 0 0 12123 0 0 15857 0 0 11643 0 0 11888 0 0 12957 0 0 2582.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 73274000 73274000 0 0 NaN 4684 1482 294 294 302 323 344 384 344 384 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17780 344 384 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17780 344 384 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17780 Q8N6T7 337 Q8N6T7 Q8N6T7 NAD-dependent protein deacetylase sirtuin-6 SIRT6 sp|Q8N6T7|SIR6_HUMAN NAD-dependent protein deacetylase sirtuin-6 OS=Homo sapiens GN=SIRT6 PE=1 SV=2 0.5 0 0.0354308 53.782 31.307 53.782 1 T QHNGSEPASPKRERPTSPAPHRPPKRVKAKA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX ERPT(0.5)S(0.5)PAPHRPPK ERPT(0)S(0)PAPHRPPK 4 4 -1.1884 10809 0 0 8164.7 0 0 12215 0 0 10006 0 0 6820.1 0 0 10395 0 0 8294.5 0 0 10359 0 0 8696.4 0 0 3477.4 0 0 10234 0 0 7723.4 0 0 12156 0 0 10168 0 0 7260.8 0 0 10408 0 0 8383.3 0 0 10497 0 0 8563.7 0 0 3514.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11152000 11152000 0 0 NaN 4685 1482 337 337 1125 1184 1274 1401 1274 1401 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5848 1274 1401 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5848 1274 1401 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5848 Q8ND82 540 Q8ND82 Q8ND82 Zinc finger protein 280C ZNF280C sp|Q8ND82|Z280C_HUMAN Zinc finger protein 280C OS=Homo sapiens GN=ZNF280C PE=1 SV=1 0.963889 15.1163 3.55276E-07 138.84 125.59 138.84 1 T TAPFGCAPGTSFLQVTPPTSQNTTARNPRKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPXXXXX LPTAPFGCAPGTSFLQVT(0.964)PPT(0.03)S(0.006)QNTTAR LPT(-96.54)APFGCAPGT(-50.9)S(-51.49)FLQVT(15.12)PPT(-15.12)S(-21.87)QNT(-41.6)T(-40.47)AR 18 3 -0.30668 5547.4 0 0 6106.9 0 0 6288.6 0 0 6697.2 0 0 5227.3 0 0 7811.3 0 0 6321.1 0 0 9753.1 0 0 7718.9 0 0 67989 0 0 5252 0 0 5772.3 0 0 6278.7 0 0 6858.3 0 0 5384.2 0 0 7932.3 0 0 6420.1 0 0 11756 0 0 7557 0 0 64245 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 43865000 43865000 0 0 NaN 4686 1504 540 540 2514 2655 2851 3180 2851 3180 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23342 2851 3180 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23342 2851 3180 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23342 Q8NDX5 609 Q8NDX5 Q8NDX5 Polyhomeotic-like protein 3 PHC3 sp|Q8NDX5|PHC3_HUMAN Polyhomeotic-like protein 3 OS=Homo sapiens GN=PHC3 PE=1 SV=1 1 79.9333 4.46568E-07 145.79 130.09 145.79 2 T EEMPEESDECVRMDRTPPPPTLSPAAITVGR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP MDRT(1)PPPPT(0.304)LS(0.696)PAAITVGR MDRT(79.93)PPPPT(-3.59)LS(3.59)PAAIT(-42.45)VGR 4 3 0.42011 0 8980.7 0 0 5959.7 0 0 10786 0 0 7946.2 0 0 6471.1 0 0 9295.3 0 0 6585.4 0 0 8813.9 0 0 7453.9 0 0 14553 0 0 8504.8 0 0 5641.2 0 0 10705 0 0 8059.3 0 0 6824.1 0 0 9278.3 0 0 6721.7 0 0 9298.2 0 0 7318 0 0 13907 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 16122000 0 16122000 0 NaN 4687 1512 609 609 2675 2827 3032 3377 3032 3377 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17382 3032 3377 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17382 3032 3377 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17382 Q8NEY8 204 Q8NEY8 Q8NEY8 Periphilin-1 PPHLN1 sp|Q8NEY8|PPHLN_HUMAN Periphilin-1 OS=Homo sapiens GN=PPHLN1 PE=1 SV=2 0.810966 6.45168 4.29165E-05 132.72 112.62 132.72 2 T RDKERPVQSLKTSRDTSPSSGSAVSSSKVLD X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPXXX T(0.448)S(0.555)RDT(0.811)S(0.185)PS(0.001)SGSAVSSSK T(-0.95)S(0.95)RDT(6.45)S(-6.45)PS(-31.13)S(-46.2)GS(-60.22)AVS(-90.2)S(-94.29)S(-98.23)K 5 3 0.99384 0 24566 0 0 20100 0 0 27972 0 0 22139 0 0 24119 0 0 25704 0 0 25773 0 0 25776 0 0 21251 0 0 7496.6 0 0 23259 0 0 19000 0 0 27926 0 0 22665 0 0 24723 0 0 25621 0 0 26032 0 0 26078 0 0 21160 0 0 7655.5 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 33874000 0 33874000 0 NaN 4688 1518 204 204 832;4951 880;5279 5622 6248;6249 5622 6248 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7435 5622 6248 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7435 5622 6248 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7435 Q8NEY8 200 Q8NEY8 Q8NEY8 Periphilin-1 PPHLN1 sp|Q8NEY8|PPHLN_HUMAN Periphilin-1 OS=Homo sapiens GN=PPHLN1 PE=1 SV=2 0.671845 3.13317 0.0415634 62.861 46.97 62.861 1 T GNPERDKERPVQSLKTSRDTSPSSGSAVSSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX ERPVQS(0.002)LKT(0.672)S(0.327)R ERPVQS(-26.22)LKT(3.13)S(-3.13)R 9 3 0.43175 25700 0 0 21309 0 0 22596 0 0 21032 0 0 30104 0 0 24623 0 0 28969 0 0 22075 0 0 25612 0 0 3167.8 0 0 24307 0 0 20128 0 0 23021 0 0 21669 0 0 30087 0 0 24494 0 0 29451 0 0 22337 0 0 25414 0 0 3493.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 87815000 87815000 0 0 NaN 4689 1518 200 200 1126;4951 1185;5279 1275 1402 1275 1402 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8320 1275 1402 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8320 1275 1402 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8320 Q8NF50 1242 Q8NF50 Q8NF50 Dedicator of cytokinesis protein 8 DOCK8 sp|Q8NF50|DOCK8_HUMAN Dedicator of cytokinesis protein 8 OS=Homo sapiens GN=DOCK8 PE=1 SV=3 0.463139 0 4.58055E-35 311.16 294.08 311.16 T PQLCDFTVADTRRYRTSGSDEEQEGAGAINQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP YRT(0.463)S(0.463)GS(0.074)DEEQEGAGAINQNVALAIAGNNFNLK Y(-67.19)RT(0)S(0)GS(-7.98)DEEQEGAGAINQNVALAIAGNNFNLK 3 4 0.2674 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4690 1520 1242 1242 4915;5421 5240;5774 6164 6860 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22408 6164 6860 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22408 6164 6860 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22408 Q8NFC6 658 Q8NFC6 Q8NFC6 Biorientation of chromosomes in cell division protein 1-like 1 BOD1L1 sp|Q8NFC6|BD1L1_HUMAN Biorientation of chromosomes in cell division protein 1-like 1 OS=Homo sapiens GN=BOD1L1 PE=1 SV=2 0.487511 0 7.81401E-11 203.82 181.81 137.9 T ENKNESKLEREHKRRTSTPVIMEGVQEETDT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP RT(0.488)S(0.488)T(0.025)PVIMEGVQEETDTR RT(0)S(0)T(-12.9)PVIMEGVQEET(-120.95)DT(-128.15)R 2 3 0.78926 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4691 1521 658 658 3540 3757;3758 4003 4443 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11088 4004 4444 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14886 4004 4444 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14886 Q8NFH5 265 Q8NFH5 Q8NFH5 Nucleoporin NUP53 NUP35 sp|Q8NFH5|NUP53_HUMAN Nucleoporin NUP53 OS=Homo sapiens GN=NUP35 PE=1 SV=1 0.999972 45.7474 0.00018982 111.77 83.136 111.77 1 T ESSDRCALSSPSLAFTPPIKTLGTPTQPGST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPXXXXXXXXXXX CALSSPSLAFT(1)PPIK CALS(-66.69)S(-60.53)PS(-45.75)LAFT(45.75)PPIK 11 3 -0.83846 3724.1 0 0 5351.1 0 0 2883.8 0 0 5792.8 0 0 3406.1 0 0 3506.5 0 0 4011.5 0 0 4994.4 0 0 5008.8 0 0 10982 0 0 3520.8 0 0 5057.5 0 0 2959.6 0 0 5884.2 0 0 3435.2 0 0 3656.1 0 0 4081.6 0 0 5283 0 0 4899.9 0 0 10457 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7585300 7585300 0 0 NaN 4692 1523 265 265 595 634 675 750 675 750 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21927 675 750 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21927 675 750 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21927 Q8NFH5 273 Q8NFH5 Q8NFH5 Nucleoporin NUP53 NUP35 sp|Q8NFH5|NUP53_HUMAN Nucleoporin NUP53 OS=Homo sapiens GN=NUP35 PE=1 SV=1 0.887541 8.97268 1.45639E-10 195.36 143.36 195.36 1 T SSPSLAFTPPIKTLGTPTQPGSTPRISTMRP X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPXXXXXX T(0.112)LGT(0.888)PTQPGSTPR T(-8.97)LGT(8.97)PT(-46.79)QPGS(-97.36)T(-107.37)PR 4 2 -1.0126 15753 0 0 24746 0 0 16272 0 0 25486 0 0 17077 0 0 15918 0 0 17519 0 0 19595 0 0 25764 0 0 6858.8 0 0 14908 0 0 23381 0 0 16365 0 0 25969 0 0 17296 0 0 16442 0 0 18037 0 0 19720 0 0 25071 0 0 6911.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24365000 24365000 0 0 NaN 4693 1523 273 273 4767 5084 5417 6023 5417 6023 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9544 5417 6023 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9544 5417 6023 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9544 Q8NG31 1843 Q8NG31 Q8NG31 Protein CASC5 CASC5 sp|Q8NG31|CASC5_HUMAN Protein CASC5 OS=Homo sapiens GN=CASC5 PE=1 SV=3 0.446318 0 0.00665492 89.506 63.071 89.506 T IDKSANSVLIKNLSRTPSSCSSSLDSIKADG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPXXX T(0.446)PS(0.446)S(0.107)CSSSLDSIK T(0)PS(0)S(-6.21)CS(-31.72)S(-34.81)S(-33.36)LDS(-77.34)IK 1 3 -0.18883 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4694 1524 1843 1843 4855 5180 5519 6137 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14434 5519 6137 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14434 5519 6137 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14434 Q8NHH9 23 Q8NHH9 Q8NHH9 Atlastin-2 ATL2 sp|Q8NHH9|ATLA2_HUMAN Atlastin-2 OS=Homo sapiens GN=ATL2 PE=1 SV=2 0.847192 7.694 1.7581E-12 195.35 179.48 195.35 1 T ARGQQPHQGLWRRRRTSDPSAAVNHVSSTTS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP RT(0.847)S(0.144)DPS(0.009)AAVNHVSSTTSLGENYEDDDLVNSDEVMK RT(7.69)S(-7.69)DPS(-19.87)AAVNHVS(-62.93)S(-60.34)T(-59.03)T(-59.03)S(-84.21)LGENY(-132.4)EDDDLVNS(-182.3)DEVMK 2 4 -0.91405 795.24 0 0 1442 0 0 476.78 0 0 1376.1 0 0 2317 0 0 686.76 0 0 1529.1 0 0 1920.7 0 0 1726.5 0 0 43534 0 0 751.31 0 0 1361.9 0 0 519.45 0 0 1405.9 0 0 2231.7 0 0 816.6 0 0 1599.7 0 0 3190.6 0 0 1695.1 0 0 41037 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 34256000 34256000 0 0 NaN 4695 1526 23 23 3530 3747 3993 4433 3993 4433 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15668 3993 4433 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15668 3993 4433 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15668 Q8NI27 1443 Q8NI27 Q8NI27 THO complex subunit 2 THOC2 sp|Q8NI27|THOC2_HUMAN THO complex subunit 2 OS=Homo sapiens GN=THOC2 PE=1 SV=2 0.999985 50.8426 0.00917034 84.046 61.129 84.046 1 T LIELKESSAKLYINHTPPPLSKSKEREMDKK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX LYINHT(1)PPPLSK LY(-50.84)INHT(50.84)PPPLS(-51.76)K 6 3 -0.26169 9983.7 0 0 12390 0 0 13828 0 0 11725 0 0 8702.9 0 0 12969 0 0 9224.2 0 0 11895 0 0 12407 0 0 6208.7 0 0 9461.5 0 0 11700 0 0 13641 0 0 12099 0 0 9144.7 0 0 12942 0 0 9451.5 0 0 12160 0 0 12107 0 0 6121.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26039000 26039000 0 0 NaN 4696 1530 1443 1443 2656 2803 3004 3342 3004 3342 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16724 3004 3342 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16724 3004 3342 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16724 Q8TAQ2 548 Q8TAQ2 Q8TAQ2 SWI/SNF complex subunit SMARCC2 SMARCC2 sp|Q8TAQ2|SMRC2_HUMAN SWI/SNF complex subunit SMARCC2 OS=Homo sapiens GN=SMARCC2 PE=1 SV=1 0.97626 17.093 0.000129097 107.75 89.69 107.75 1 T VLADTPSGLVPLQPKTPQQTSASQQMLNFPD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP T(0.976)PQQT(0.019)S(0.004)AS(0.001)QQMLNFPDK T(17.09)PQQT(-17.09)S(-24.15)AS(-30.28)QQMLNFPDK 1 3 2.8895 9190.5 0 0 8332.4 0 0 8339.5 0 0 8592.1 0 0 6664 0 0 8831.7 0 0 6238.2 0 0 7536.5 0 0 9105.9 0 0 20922 0 0 8693.4 0 0 7872.8 0 0 8425 0 0 8810.1 0 0 6858.3 0 0 8864.9 0 0 6449 0 0 8240.2 0 0 8863.2 0 0 19875 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9778700 9778700 0 0 NaN 4697 1534 548 548 4838 5163 5502 6120 5502 6120 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17986 5502 6120 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17986 5502 6120 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17986 Q8TB03 314 Q8TB03 Q8TB03 Uncharacterized protein CXorf38 CXorf38 sp|Q8TB03|CX038_HUMAN Uncharacterized protein CXorf38 OS=Homo sapiens GN=CXorf38 PE=1 SV=1 0.998542 28.3554 0.000351459 108.77 78.561 108.77 1 T LCLHQKLDSQEPGRQTPDRKA__________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX LDS(0.001)QEPGRQT(0.999)PDR LDS(-28.36)QEPGRQT(28.36)PDR 10 3 0.20346 10278 0 0 15028 0 0 12371 0 0 13539 0 0 23676 0 0 11379 0 0 23598 0 0 17477 0 0 14555 0 0 2624.3 0 0 9733.3 0 0 14188 0 0 12475 0 0 13958 0 0 23350 0 0 11584 0 0 23777 0 0 17374 0 0 14745 0 0 2875.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 62825000 62825000 0 0 NaN 4698 1535 314 314 2318 2451 2640 2951 2640 2951 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7315 2640 2951 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7315 2640 2951 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7315 Q8TD19 333 Q8TD19 Q8TD19 Serine/threonine-protein kinase Nek9 NEK9 sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1 SV=2 0.332918 0 0.00600253 85.203 62.67 85.203 T KVTLLNAPTKRPRSSTVTEAPIAVVTSRTSE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.333)S(0.333)T(0.333)VT(0.001)EAPIAVVTSR S(0)S(0)T(0)VT(-24.26)EAPIAVVT(-83.78)S(-83.41)R 3 3 0.084641 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4699 1546 333 333 4486 4778 5088 5647 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17450 5088 5647 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17450 5088 5647 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17450 Q8TEH3 707 Q8TEH3 Q8TEH3 DENN domain-containing protein 1A DENND1A sp|Q8TEH3|DEN1A_HUMAN DENN domain-containing protein 1A OS=Homo sapiens GN=DENND1A PE=1 SV=2 1 113.542 0.000387961 113.54 99.189 113.54 1 T PTLGSITIPRPQGRKTPELGIVPPPPIPRPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPXX KT(1)PELGIVPPPPIPR KT(113.54)PELGIVPPPPIPR 2 3 -0.17872 6642 0 0 6502.1 0 0 6857.3 0 0 8012.5 0 0 10297 0 0 8191.3 0 0 11748 0 0 7795 0 0 6832.9 0 0 8878.2 0 0 6285.8 0 0 6150.9 0 0 6937.4 0 0 8137.6 0 0 10262 0 0 8214.3 0 0 11754 0 0 8101.8 0 0 6950.5 0 0 8540.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13485000 13485000 0 0 NaN 4700 1551 707 707 2249 2377 2558 2855 2558 2855 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19585 2558 2855 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19585 2558 2855 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19585 Q8TEK3 1244 Q8TEK3 Q8TEK3 Histone-lysine N-methyltransferase, H3 lysine-79 specific DOT1L sp|Q8TEK3|DOT1L_HUMAN Histone-lysine N-methyltransferase, H3 lysine-79 specific OS=Homo sapiens GN=DOT1L PE=1 SV=2 0.333296 0 0.0239715 79.652 48.012 79.652 T PAPAGEPVNSSKWKSTFSPISDIGLAKSADS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.333)T(0.333)FS(0.333)PISDIGLAK S(0)T(0)FS(0)PIS(-34.73)DIGLAK 2 3 0.52729 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4701 1552 1244 1244 4504 4797 5109 5674 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22932 5109 5674 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22932 5109 5674 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22932 Q8TEM1 1844 Q8TEM1 Q8TEM1 Nuclear pore membrane glycoprotein 210 NUP210 sp|Q8TEM1|PO210_HUMAN Nuclear pore membrane glycoprotein 210 OS=Homo sapiens GN=NUP210 PE=1 SV=3 1 101.428 0.00036714 101.43 64.237 101.43 1 T HTVCTPRDLAVPAALTPRASPGHSPHYFAAS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX DLAVPAALT(1)PR DLAVPAALT(101.43)PR 9 2 -2.0348 37603 0 0 74552 0 0 35920 0 0 63958 0 0 27244 0 0 37199 0 0 33179 0 0 46202 0 0 73927 0 0 9100.4 0 0 35576 0 0 70366 0 0 36171 0 0 65887 0 0 28282 0 0 38611 0 0 34604 0 0 46269 0 0 71216 0 0 9638.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 198780000 198780000 0 0 NaN 4702 1553 1844 1844 725 769 820 906 820 906 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17288 820 906 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17288 820 906 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17288 Q8TF76 110 Q8TF76 Q8TF76 Serine/threonine-protein kinase haspin GSG2 sp|Q8TF76|HASP_HUMAN Serine/threonine-protein kinase haspin OS=Homo sapiens GN=GSG2 PE=1 SV=3 0.62869 1.28231 0.0437123 40.278 21.445 40.278 2 T TVTPKRWKLRARPSLTVTPRRLGLRARPPQK X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX LRARPS(0.87)LT(0.629)VT(0.501)PR LRARPS(5.85)LT(1.28)VT(-1.28)PR 8 4 -2.7947 0 8306.4 0 0 8617 0 0 8082.7 0 0 7504 0 0 6477.6 0 0 8346.6 0 0 6526.7 0 0 7576.2 0 0 8734.1 0 0 3987.6 0 0 7859.2 0 0 8133.9 0 0 8132.1 0 0 7786.4 0 0 6671 0 0 8326.5 0 0 6701.7 0 0 7749.5 0 0 8524.3 0 0 3930.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 32138000 0 32138000 0 NaN 4703 1559 110 110 2532 2675 2871 3203 2871 3203 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5213 2871 3203 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5213 2871 3203 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5213 Q8WUA7 51 Q8WUA7 Q8WUA7 TBC1 domain family member 22A TBC1D22A sp|Q8WUA7|TB22A_HUMAN TBC1 domain family member 22A OS=Homo sapiens GN=TBC1D22A PE=1 SV=2 0.935762 11.6338 0.021183 76.345 36.344 76.345 1 T LLHGTLLRSTAKMPTTPVKAKRVSTFQEFES X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPXXXXXXXXXXXX MPT(0.064)T(0.936)PVK MPT(-11.63)T(11.63)PVK 4 2 -0.10105 32417 0 0 17822 0 0 30477 0 0 18782 0 0 18036 0 0 34765 0 0 14974 0 0 22259 0 0 19940 0 0 8931.4 0 0 30668 0 0 16842 0 0 30642 0 0 19483 0 0 18999 0 0 33993 0 0 15525 0 0 23081 0 0 19465 0 0 8925.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15864000 15864000 0 0 NaN 4704 1563 51 51 2727 2892 3101 3448 3101 3448 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12797 3101 3448 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12797 3101 3448 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12797 Q8WWM7 31 Q8WWM7 Q8WWM7 Ataxin-2-like protein ATXN2L sp|Q8WWM7|ATX2L_HUMAN Ataxin-2-like protein OS=Homo sapiens GN=ATXN2L PE=1 SV=2 0.498958 0 0.00208786 83.014 70.953 83.014 T PPPTQQAVARRPPGGTSPPNGGLPGPLATSA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPP RPPGGT(0.499)S(0.499)PPNGGLPGPLAT(0.002)SAAPPGPPAAASPCLGPVAAAGSGLR RPPGGT(0)S(0)PPNGGLPGPLAT(-24.69)S(-31.09)AAPPGPPAAAS(-64.27)PCLGPVAAAGS(-82.15)GLR 6 6 0.39152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4705 1576 31 31 3396 3608 3849 4274 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20057 3849 4274 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20057 3849 4274 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20057 Q8WXI9 488 Q8WXI9 Q8WXI9 Transcriptional repressor p66-beta GATAD2B sp|Q8WXI9|P66B_HUMAN Transcriptional repressor p66-beta OS=Homo sapiens GN=GATAD2B PE=1 SV=1 0.763498 5.27645 6.18175E-05 117.61 100.54 117.61 1 T QEIEQRLQQQAALSPTTAPAVSSVSKQETIM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPXXXXX LQQQAALS(0.227)PT(0.763)T(0.01)APAVSSVSK LQQQAALS(-5.28)PT(5.28)T(-18.85)APAVS(-73.53)S(-79.62)VS(-91.02)K 10 3 0.77012 15820 0 0 13782 0 0 17043 0 0 15159 0 0 15279 0 0 18477 0 0 13794 0 0 15033 0 0 19674 0 0 17816 0 0 14974 0 0 13028 0 0 17066 0 0 15534 0 0 15594 0 0 18363 0 0 14273 0 0 15750 0 0 19163 0 0 17124 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 74703000 74703000 0 0 NaN 4706 1582 488 488 2529 2672 2868 3200 2868 3200 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16303 2868 3200 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16303 2868 3200 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16303 Q8WYH8 147 Q8WYH8 Q8WYH8 Inhibitor of growth protein 5 ING5 sp|Q8WYH8|ING5_HUMAN Inhibitor of growth protein 5 OS=Homo sapiens GN=ING5 PE=1 SV=1 0.705415 3.79234 0.000984546 112.82 75.804 112.82 1 T RGQKEKRGSRGRGRRTSEEDTPKKKKHKGGS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPXXXXXXXX RT(0.705)S(0.295)EEDTPK RT(3.79)S(-3.79)EEDT(-78.49)PK 2 3 -0.69792 14758 0 0 13738 0 0 14071 0 0 15468 0 0 13835 0 0 14686 0 0 15191 0 0 14119 0 0 15797 0 0 2555.7 0 0 13963 0 0 12988 0 0 14208 0 0 15764 0 0 14074 0 0 14753 0 0 15415 0 0 14261 0 0 15562 0 0 2733.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27965000 27965000 0 0 NaN 4707 1584 147 147 3531 3748 3994 4434 3994 4434 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6342 3994 4434 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6342 3994 4434 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6342 Q92504 294 Q92504 Q92504 Zinc transporter SLC39A7 SLC39A7 sp|Q92504|S39A7_HUMAN Zinc transporter SLC39A7 OS=Homo sapiens GN=SLC39A7 PE=1 SV=2 0.564265 1.12261 0.0413441 67.726 33.339 67.726 1 T EEKETRGVQKRRGGSTVPKDGPVRPQNAEEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX RGGS(0.436)T(0.564)VPK RGGS(-1.12)T(1.12)VPK 5 3 -1.5484 20005 0 0 21811 0 0 17801 0 0 22620 0 0 16098 0 0 21494 0 0 15124 0 0 18677 0 0 22400 0 0 2331.1 0 0 18921 0 0 20609 0 0 18029 0 0 23158 0 0 16430 0 0 21564 0 0 15641 0 0 18914 0 0 21793 0 0 2627.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11094000 11094000 0 0 NaN 4708 1591 294 294 1458;3244 1535;3441 3677 4080 3677 4080 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6867 3677 4080 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6867 3677 4080 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6867 Q92521 40 Q92521 Q92521 GPI mannosyltransferase 3 PIGB sp|Q92521|PIGB_HUMAN GPI mannosyltransferase 3 OS=Homo sapiens GN=PIGB PE=2 SV=1 0.622499 2.17233 1.17294E-06 164.48 127.81 164.48 1 T QNRSHGKIKLRKRKSTLYFNTQEKSARRRGD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPXXXXXXX S(0.377)T(0.622)LYFNTQEK S(-2.17)T(2.17)LY(-47.46)FNT(-68.25)QEK 2 3 -0.30341 9333.6 0 0 7406.7 0 0 11425 0 0 7390.1 0 0 6619.4 0 0 10360 0 0 7932.2 0 0 9092.1 0 0 6977.6 0 0 12928 0 0 8839.9 0 0 6996.8 0 0 11327 0 0 7636.6 0 0 7018.8 0 0 10260 0 0 7985.1 0 0 9558.7 0 0 6925.3 0 0 12384 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15724000 15724000 0 0 NaN 4709 1593 40 40 4511 4805 5118 5684 5118 5684 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16725 5118 5684 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16725 5118 5684 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16725 Q92538 1337 Q92538 Q92538 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 GBF1 sp|Q92538|GBF1_HUMAN Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 OS=Homo sapiens GN=GBF1 PE=1 SV=2 0.5 0 2.42586E-07 154.6 135.02 154.6 1 T VYTDHGRPGKIHRSATDADVVNSGWLVVGKD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.5)AT(0.5)DADVVNSGWLVVGK S(0)AT(0)DADVVNS(-75.91)GWLVVGK 3 3 -0.14127 3197.2 0 0 3727.6 0 0 3827.2 0 0 2669.1 0 0 3013.1 0 0 3481.1 0 0 3450.7 0 0 4469.5 0 0 3322.2 0 0 34719 0 0 3027.7 0 0 3515.3 0 0 3808.4 0 0 2818.2 0 0 3111.8 0 0 3530.8 0 0 3488 0 0 5491.1 0 0 3283.4 0 0 32796 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 4845300 4845300 0 0 NaN 4710 1596 1337 1337 3631 3860 4113 4570 4113 4570 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22952 4113 4570 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22952 4113 4570 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22952 Q92609 552 Q92609 Q92609 TBC1 domain family member 5 TBC1D5 sp|Q92609|TBCD5_HUMAN TBC1 domain family member 5 OS=Homo sapiens GN=TBC1D5 PE=1 SV=1 0.578547 1.77617 0.0202764 84.653 61.173 84.653 1 T SSSPSVESLPGGREFTGSPPSSATKKDSFFS X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX EFT(0.579)GS(0.384)PPS(0.029)S(0.008)AT(0.001)KK EFT(1.78)GS(-1.78)PPS(-13.05)S(-18.63)AT(-30.37)KK 3 3 0.10722 48752 0 0 33456 0 0 61456 0 0 31470 0 0 53978 0 0 57744 0 0 59307 0 0 49197 0 0 36760 0 0 10340 0 0 46180 0 0 31594 0 0 61070 0 0 32856 0 0 55272 0 0 56619 0 0 59496 0 0 49991 0 0 37227 0 0 10875 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 63649000 63649000 0 0 NaN 4711 1606 552 552 946;947 1000;1001 1086 1199 1086 1199 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11970 1086 1199 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11970 1086 1199 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11970 Q92609 42 Q92609 Q92609 TBC1 domain family member 5 TBC1D5 sp|Q92609|TBCD5_HUMAN TBC1 domain family member 5 OS=Homo sapiens GN=TBC1D5 PE=1 SV=1 0.610669 2.78025 1.86468E-15 219.12 192.58 219.12 1 T YSNKSGGDSNKNGRRTSSTLDSEGTFNSYRK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPX T(0.611)S(0.322)S(0.057)T(0.01)LDSEGTFNSYR T(2.78)S(-2.78)S(-10.29)T(-17.75)LDS(-47.03)EGT(-73.6)FNS(-107.81)Y(-141.59)R 1 2 0.88596 9370.3 0 0 6694.7 0 0 10919 0 0 6554.4 0 0 14860 0 0 10503 0 0 16660 0 0 12207 0 0 8404.7 0 0 12953 0 0 8872.5 0 0 6323.4 0 0 10958 0 0 6801.8 0 0 14865 0 0 10397 0 0 16646 0 0 12569 0 0 8643.1 0 0 12479 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17367000 17367000 0 0 NaN 4712 1606 42 42 3539;4970 3756;5299 5645 6274 5645 6274 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14450 5645 6274 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14450 5645 6274 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14450 Q92615 732 Q92615 Q92615 La-related protein 4B LARP4B sp|Q92615|LAR4B_HUMAN La-related protein 4B OS=Homo sapiens GN=LARP4B PE=1 SV=3 0.586379 1.51576 0.000219443 117.7 95.676 117.7 2 T PSPSAMGKRLSREQSTPPKSPQ_________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX EQS(0.414)T(0.586)PPKS(1)PQ EQS(-1.52)T(1.52)PPKS(64.62)PQ 4 2 0.41369 0 8229.9 0 0 9194.5 0 0 7446.9 0 0 8173.2 0 0 6206.6 0 0 8319 0 0 7404.3 0 0 7941.1 0 0 10131 0 0 3637.3 0 0 7784.7 0 0 8679.9 0 0 7530.7 0 0 8456.7 0 0 6391.3 0 0 8334.1 0 0 7554.1 0 0 8089.8 0 0 9880.7 0 0 3608.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 17656000 0 17656000 0 NaN 4713 1609 732 732 1106 1164;1165 1254 1378 1254 1378 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7109 1254 1378 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7109 1254 1378 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7109 Q92619 12 Q92619 Q92619 Minor histocompatibility protein HA-1;Minor histocompatibility antigen HA-1 HMHA1 sp|Q92619|HMHA1_HUMAN Minor histocompatibility protein HA-1 OS=Homo sapiens GN=HMHA1 PE=1 SV=2 0.92501 11.1161 0.0527556 63.283 31.062 63.283 1 T ____MFSRKKRELMKTPSISKKNRAGSPSPQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX T(0.925)PS(0.072)IS(0.003)KK T(11.12)PS(-11.12)IS(-24.28)KK 1 3 -0.12678 210220 0 0 10973 0 0 211700 0 0 12952 0 0 58335 0 0 195820 0 0 64684 0 0 92094 0 0 18433 0 0 3857 0 0 198930 0 0 10377 0 0 211220 0 0 16117 0 0 68300 0 0 186820 0 0 64271 0 0 96513 0 0 20149 0 0 5763.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 189170000 189170000 0 0 NaN 4714 1612 12 12 4848 5173 5512 6130 5512 6130 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10540 5512 6130 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10540 5512 6130 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10540 Q92688 244 Q92688 Q92688 Acidic leucine-rich nuclear phosphoprotein 32 family member B ANP32B sp|Q92688|AN32B_HUMAN Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Homo sapiens GN=ANP32B PE=1 SV=1 1 86.9442 7.95031E-10 188.63 181.93 86.944 1 T EEEEEGGKGEKRKRETDDEGEDD________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX KRET(1)DDEGEDD KRET(86.94)DDEGEDD 4 2 -0.22281 67766 0 0 103030 0 0 69181 0 0 104460 0 0 84864 0 0 64659 0 0 88849 0 0 91620 0 0 111110 0 0 28038 0 0 64129 0 0 97341 0 0 69779 0 0 106530 0 0 85272 0 0 66978 0 0 90859 0 0 91702 0 0 108690 0 0 28521 0 0 9 0 0 9 0 0 9 0 0 9 0 0 9 0 0 9 0 0 9 0 0 9 0 0 9 0 0 9 0 0 132140000 132140000 0 0 NaN 4715 1616 244 244 2195 2319 2496;2497;2498;2499;2500 2782;2783;2784;2785;2786;2787;2788;2789;2790;2791 2500 2791 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5873 2497 2783 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6048 2497 2783 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6048 Q92766 2 Q92766 Q92766 Ras-responsive element-binding protein 1 RREB1 sp|Q92766|RREB1_HUMAN Ras-responsive element-binding protein 1 OS=Homo sapiens GN=RREB1 PE=1 SV=3 0.144257 0 0.0264439 45.957 35.153 45.957 T ______________MTSSSPAGLEGSDLSSI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP T(0.144)S(0.144)S(0.144)S(0.144)PAGLEGS(0.133)DLS(0.133)S(0.133)INT(0.023)MMS(0.001)AVMSVGK T(0)S(0)S(0)S(0)PAGLEGS(-0.35)DLS(-0.35)S(-0.35)INT(-8.05)MMS(-23.07)AVMS(-40.3)VGK 1 3 -0.2376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4716 1618 2 2 4969 5298 5644 6273 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24573 5644 6273 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24573 5644 6273 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24573 Q92785 176 Q92785 Q92785 Zinc finger protein ubi-d4 DPF2 sp|Q92785|REQU_HUMAN Zinc finger protein ubi-d4 OS=Homo sapiens GN=DPF2 PE=1 SV=2 0.994559 22.6198 1.88223E-05 132.28 117.58 132.28 1 T DDFLDDLDDEDYEEDTPKRRGKGKSKGKGVG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPXXXXXXXXXXXXX ILEPDDFLDDLDDEDY(0.005)EEDT(0.995)PK ILEPDDFLDDLDDEDY(-22.62)EEDT(22.62)PK 20 3 0.98179 6060.9 0 0 6840.9 0 0 7058.8 0 0 7057.6 0 0 7413.1 0 0 6912.3 0 0 5396.3 0 0 10236 0 0 8978.2 0 0 110110 0 0 5738.9 0 0 6463.6 0 0 7050.9 0 0 7231 0 0 7476.8 0 0 7184.1 0 0 5687.9 0 0 13457 0 0 8706.8 0 0 103920 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30003000 30003000 0 0 NaN 4717 1619 176 176 1878 1982 2140 2399 2140 2399 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23971 2140 2399 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23971 2140 2399 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23971 Q92797 1257 Q92797 Q92797 Symplekin SYMPK sp|Q92797|SYMPK_HUMAN Symplekin OS=Homo sapiens GN=SYMPK PE=1 SV=2 0.57375 1.29058 8.6411E-05 131.31 105.8 131.31 1 T RSPQTLAPVGEDAMKTPSPAAEDAREPEAKG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPX T(0.574)PS(0.426)PAAEDAREPEAK T(1.29)PS(-1.29)PAAEDAREPEAK 1 3 -0.20548 10765 0 0 35616 0 0 12827 0 0 38078 0 0 11666 0 0 14997 0 0 13226 0 0 22202 0 0 37907 0 0 6909.9 0 0 10194 0 0 33660 0 0 12787 0 0 38576 0 0 11953 0 0 16165 0 0 14063 0 0 22200 0 0 36356 0 0 7020.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 22646000 22646000 0 0 NaN 4718 1622 1257 1257 4851 5176 5515 6133 5515 6133 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8841 5515 6133 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8841 5515 6133 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8841 Q92917 216 Q92917 Q92917 G patch domain and KOW motifs-containing protein GPKOW sp|Q92917|GPKOW_HUMAN G patch domain and KOW motifs-containing protein OS=Homo sapiens GN=GPKOW PE=1 SV=2 0.964334 14.604 9.28698E-12 205.8 179.68 205.8 1 T KGLGLGANLTEAQALTPTGPSRMPRPDEEQE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPPPPXXXXXXXXX GLGLGANLTEAQALT(0.964)PT(0.033)GPS(0.002)R GLGLGANLT(-108.45)EAQALT(14.6)PT(-14.6)GPS(-26.3)R 15 3 0.13229 4903.6 0 0 4590.9 0 0 4646.4 0 0 4633.9 0 0 3991.4 0 0 4101.6 0 0 2941.4 0 0 4613.1 0 0 4583.1 0 0 17726 0 0 4639.1 0 0 4337.1 0 0 4683.4 0 0 4746.8 0 0 4075.9 0 0 4174.8 0 0 3089.4 0 0 5141.6 0 0 4452.5 0 0 16798 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15486000 15486000 0 0 NaN 4719 1630 216 216 1497 1575 1700 1881 1700 1881 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18972 1700 1881 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18972 1700 1881 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18972 Q92922 398 Q92922 Q92922 SWI/SNF complex subunit SMARCC1 SMARCC1 sp|Q92922|SMRC1_HUMAN SWI/SNF complex subunit SMARCC1 OS=Homo sapiens GN=SMARCC1 PE=1 SV=3 0.999137 30.6357 0.0219161 72.34 32.295 72.34 1 T VVLPKNVNLKKDSENTPVKGGTVADLDEQDE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX DS(0.001)ENT(0.999)PVK DS(-30.64)ENT(30.64)PVK 5 2 -0.79989 34007 0 0 34412 0 0 35469 0 0 38351 0 0 27224 0 0 36612 0 0 22408 0 0 34106 0 0 37827 0 0 7007.7 0 0 32184 0 0 32530 0 0 35521 0 0 39110 0 0 28061 0 0 36757 0 0 23463 0 0 34519 0 0 36670 0 0 7388 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 39129000 39129000 0 0 NaN 4720 1631 398 398 803 851 907 999 907 999 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7729 907 999 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7729 907 999 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7729 Q96A49 248 Q96A49 Q96A49 Synapse-associated protein 1 SYAP1 sp|Q96A49|SYAP1_HUMAN Synapse-associated protein 1 OS=Homo sapiens GN=SYAP1 PE=1 SV=1 1 83.9983 0.0117628 83.998 38.686 83.998 1 T GREQDLPLAEAVRPKTPPVVIKSQLKTQEDE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX T(1)PPVVIK T(84)PPVVIK 1 3 -0.19172 14848 0 0 34607 0 0 15554 0 0 34849 0 0 7064.8 0 0 14857 0 0 7465.8 0 0 20004 0 0 37252 0 0 1897 0 0 14053 0 0 32693 0 0 15518 0 0 35446 0 0 7704.4 0 0 15852 0 0 8395.9 0 0 19923 0 0 35493 0 0 2249.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 35154000 35154000 0 0 NaN 4721 1642 248 248 4834 5159 5498 6116 5498 6116 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15702 5498 6116 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15702 5498 6116 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15702 Q96AE4 153 Q96AE4 Q96AE4 Far upstream element-binding protein 1 FUBP1 sp|Q96AE4|FUBP1_HUMAN Far upstream element-binding protein 1 OS=Homo sapiens GN=FUBP1 PE=1 SV=3 0.999627 34.2948 9.03488E-11 202.34 182.09 202.34 1 T PDSGGLPERSCMLTGTPESVQSAKRLLDQIV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPXXXXXXX SCMLTGT(1)PESVQSAK S(-59.06)CMLT(-34.29)GT(34.29)PES(-81.44)VQS(-141.25)AK 7 3 -0.10715 9955.8 0 0 12505 0 0 9741.9 0 0 13059 0 0 10677 0 0 9580.1 0 0 12272 0 0 11292 0 0 12843 0 0 6617.5 0 0 9419.9 0 0 11816 0 0 9836.3 0 0 13319 0 0 10803 0 0 9791.8 0 0 12431 0 0 11460 0 0 12648 0 0 6492.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 24191000 24191000 0 0 NaN 4722 1646 153 153 3643 3873 4127 4586 4127 4586 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14512 4127 4586 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14512 4127 4586 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14512 Q96B36 246 Q96B36 Q96B36 Proline-rich AKT1 substrate 1 AKT1S1 sp|Q96B36|AKTS1_HUMAN Proline-rich AKT1 substrate 1 OS=Homo sapiens GN=AKT1S1 PE=1 SV=1 0.919166 10.558 0.0259051 66.538 43.659 66.538 1 T EDTQVFGDLPRPRLNTSDFQKLKRKY_____ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX LNT(0.919)S(0.081)DFQK LNT(10.56)S(-10.56)DFQK 3 2 -0.19384 17537 0 0 9735.2 0 0 17574 0 0 10546 0 0 12277 0 0 18110 0 0 12941 0 0 12988 0 0 10699 0 0 13207 0 0 16594 0 0 9201.1 0 0 17630 0 0 10901 0 0 12778 0 0 17776 0 0 13079 0 0 13625 0 0 10651 0 0 12737 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6251800 6251800 0 0 NaN 4723 1653 246 246 2488 2627 2821 3148 2821 3148 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15194 2821 3148 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15194 2821 3148 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15194 Q96BK5 164 Q96BK5 Q96BK5 PIN2/TERF1-interacting telomerase inhibitor 1 PINX1 sp|Q96BK5|PINX1_HUMAN PIN2/TERF1-interacting telomerase inhibitor 1 OS=Homo sapiens GN=PINX1 PE=1 SV=2 0.352235 0 1.6099E-05 131.38 117.94 131.38 T KRQSKKTPEGDASPSTPEENETTTTSAFTIQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KT(0.011)PEGDAS(0.285)PS(0.352)T(0.352)PEENETTTTSAFTIQEYFAK KT(-15.23)PEGDAS(-0.92)PS(0)T(0)PEENET(-55.12)T(-66.39)T(-74.39)T(-82.68)S(-82.18)AFT(-89.25)IQEY(-117.36)FAK 11 4 -0.4261 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4724 1656 164 164 2248 2376 2557 2854 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21819 2557 2854 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21819 2557 2854 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21819 Q96E09 149 Q96E09 Q96E09 Protein FAM122A FAM122A sp|Q96E09|F122A_HUMAN Protein FAM122A OS=Homo sapiens GN=FAM122A PE=1 SV=1 0.499985 0 9.30427E-07 138.82 125.79 138.82 1 T PKRIDFIPVSPAPSPTRGIGKQCFSPSLQSF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RIDFIPVSPAPS(0.5)PT(0.5)R RIDFIPVS(-42.28)PAPS(0)PT(0)R 14 3 -0.35825 6414 0 0 6977.6 0 0 5816 0 0 6344.8 0 0 5872.5 0 0 6589.8 0 0 5764.4 0 0 5360 0 0 5640.2 0 0 4734.4 0 0 6067 0 0 6587.9 0 0 5891.3 0 0 6557.2 0 0 5954.4 0 0 6587.9 0 0 5869.4 0 0 5566.7 0 0 5570.4 0 0 4582.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29126000 29126000 0 0 NaN 4725 1668 149 149 3270 3468;3469 3705 4114 3705 4114 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18387 3705 4114 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18387 3705 4114 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18387 Q96FV9 4 Q96FV9 Q96FV9 THO complex subunit 1 THOC1 sp|Q96FV9|THOC1_HUMAN THO complex subunit 1 OS=Homo sapiens GN=THOC1 PE=1 SV=1 0.499981 0 0.02262 55.426 40.759 55.426 1 T ____________MSPTPPLFSLPEARTRFTK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MS(0.5)PT(0.5)PPLFSLPEAR MS(0)PT(0)PPLFS(-41.19)LPEAR 4 2 0.974 7712.1 0 0 6960.2 0 0 5439.2 0 0 6601.9 0 0 9027.9 0 0 6656.7 0 0 9041.1 0 0 7284.9 0 0 7125.4 0 0 36607 0 0 7289.1 0 0 6573 0 0 5651.6 0 0 6801.4 0 0 8948 0 0 6746.7 0 0 9149.9 0 0 8386 0 0 7111.9 0 0 34639 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20266000 20266000 0 0 NaN 4726 1679 4 4 2750 2917 3127 3474 3127 3474 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24086 3127 3474 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24086 3127 3474 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24086 Q96G46 273 Q96G46 Q96G46 tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like DUS3L sp|Q96G46|DUS3L_HUMAN tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like OS=Homo sapiens GN=DUS3L PE=1 SV=2 0.926939 11.4296 0.00185545 99.325 83.05 99.325 2 T ENCGAQQVPAGPGTSTPPSSPVRTCGPLTDE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPXXXXXXXX QENCGAQQVPAGPGT(0.015)S(0.071)T(0.927)PPS(0.395)S(0.592)PVR QENCGAQQVPAGPGT(-20.61)S(-11.43)T(11.43)PPS(-1.73)S(1.73)PVR 17 3 0.15129 0 7912.3 0 0 6918.7 0 0 8793 0 0 5806.5 0 0 4616.3 0 0 7782.1 0 0 4478 0 0 6892.9 0 0 5918.2 0 0 3953.6 0 0 7490.4 0 0 6529.5 0 0 8752.1 0 0 6061.6 0 0 4930.7 0 0 7708.5 0 0 4604.3 0 0 7067.7 0 0 5778.4 0 0 3882.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 54844000 0 54844000 0 NaN 4727 1681 273 273 3016 3197 3420 3793 3420 3793 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10061 3420 3793 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10061 3420 3793 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10061 Q96JM3 458 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 CHAMP1 sp|Q96JM3|CHAP1_HUMAN Chromosome alignment-maintaining phosphoprotein 1 OS=Homo sapiens GN=CHAMP1 PE=1 SV=2 0.498912 0 0.0369433 71.742 44.093 71.742 T SGSPDLWKLSPDQRKTSPASLDFPESQKSSR X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPXXX KT(0.499)S(0.499)PAS(0.002)LDFPESQK KT(0)S(0)PAS(-23.63)LDFPES(-45.51)QK 2 3 0.1894 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4728 1699 458 458 2252;4927 2380;5252 2562 2860 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15416 2562 2860 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15416 2562 2860 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15416 Q96JN0 41 Q96JN0 Q96JN0 Ligand-dependent corepressor LCOR sp|Q96JN0|LCOR_HUMAN Ligand-dependent corepressor OS=Homo sapiens GN=LCOR PE=1 SV=2 0.465072 0 1.90291E-05 132.26 107.96 132.26 T NSTKNQSLPKASPVTTSPTAATTQNPVLSKL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPPX AS(0.001)PVT(0.058)T(0.465)S(0.465)PT(0.011)AATTQNPVLSK AS(-25.09)PVT(-9.06)T(0)S(0)PT(-16.38)AAT(-62.5)T(-65.94)QNPVLS(-114.2)K 6 3 -0.04648 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4729 1701 41 41 489 520 559 624 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16056 559 624 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16056 559 624 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16056 Q96KQ7 555 Q96KQ7 Q96KQ7 Histone-lysine N-methyltransferase EHMT2 EHMT2 sp|Q96KQ7|EHMT2_HUMAN Histone-lysine N-methyltransferase EHMT2 OS=Homo sapiens GN=EHMT2 PE=1 SV=3 0.999617 34.1621 0.000108932 111.31 94.381 111.31 1 T ASEAQEVTIPRGDGVTPPAGTAAPAPPPLSQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP GDGVT(1)PPAGTAAPAPPPLSQDVPGR GDGVT(34.16)PPAGT(-34.16)AAPAPPPLS(-89.66)QDVPGR 5 3 0.46982 4844.5 0 0 5234.6 0 0 3870.2 0 0 5564.8 0 0 6462.7 0 0 3954.1 0 0 5544.9 0 0 5077.5 0 0 5037.8 0 0 20287 0 0 4580.5 0 0 4946.8 0 0 3983.1 0 0 5667.7 0 0 6391.9 0 0 4087.6 0 0 5674.4 0 0 5660.9 0 0 4992.3 0 0 19220 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10097000 10097000 0 0 NaN 4730 1709 555 555 1390 1466 1575 1739 1575 1739 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16331 1575 1739 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16331 1575 1739 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16331 Q96MF7 12 Q96MF7 Q96MF7 E3 SUMO-protein ligase NSE2 NSMCE2 sp|Q96MF7|NSE2_HUMAN E3 SUMO-protein ligase NSE2 OS=Homo sapiens GN=NSMCE2 PE=1 SV=2 0.244924 1.19292 0.00282075 96.903 79.202 96.903 T ____MPGRSSSNSGSTGFISFSGVESALSSL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPPPPPP S(0.142)S(0.142)S(0.142)NS(0.142)GS(0.186)T(0.245)GFISFSGVESALSSLK S(-2.36)S(-2.36)S(-2.36)NS(-2.36)GS(-1.19)T(1.19)GFIS(-31.48)FS(-53.01)GVES(-77.15)ALS(-84.35)S(-90.03)LK 8 3 -2.9727 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4731 1713 12 12 4437 4728 5032 5581 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24087 5032 5581 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24087 5032 5581 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24087 Q96NW4 1023 Q96NW4 Q96NW4 Ankyrin repeat domain-containing protein 27 ANKRD27 sp|Q96NW4|ANR27_HUMAN Ankyrin repeat domain-containing protein 27 OS=Homo sapiens GN=ANKRD27 PE=1 SV=2 0.999997 54.9043 9.89434E-09 173.64 159.16 173.64 1 T LTQTGPGHRRMLRRHTVEDAVVSQGPEAAGP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP RHT(1)VEDAVVSQGPEAAGPLSTPQEVSASR RHT(54.9)VEDAVVS(-54.9)QGPEAAGPLS(-154.93)T(-157.38)PQEVS(-166.8)AS(-167.64)R 3 4 0.8244 5545.8 0 0 7164.2 0 0 6463 0 0 7841.8 0 0 7277.6 0 0 7258.4 0 0 8156.9 0 0 7750.3 0 0 8995.7 0 0 5815 0 0 5251.2 0 0 6771.7 0 0 6466.8 0 0 8001 0 0 7350.5 0 0 7318.6 0 0 8283.8 0 0 7930.3 0 0 8840.5 0 0 5654.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 19700000 19700000 0 0 NaN 4732 1722 1023 1023 3269 3467 3704 4113 3704 4113 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13840 3704 4113 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13840 3704 4113 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13840 Q96PK6 572 Q96PK6 Q96PK6 RNA-binding protein 14 RBM14 sp|Q96PK6|RBM14_HUMAN RNA-binding protein 14 OS=Homo sapiens GN=RBM14 PE=1 SV=2 0.892558 9.19463 5.70371E-13 205.69 191.32 205.69 1 T AYLSMSQGAVANANSTPPPYERTRLSPPRAS X;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPXXXXXXXXX GQPGNAYDGAGQPSAAYLSMSQGAVANANS(0.107)T(0.893)PPPYER GQPGNAY(-154.45)DGAGQPS(-112.78)AAY(-101.73)LS(-80.28)MS(-67.66)QGAVANANS(-9.19)T(9.19)PPPY(-93.36)ER 31 3 -0.2348 11412 0 0 10516 0 0 9927.2 0 0 11010 0 0 9900.9 0 0 12746 0 0 12977 0 0 13805 0 0 13199 0 0 98569 0 0 10793 0 0 9936.8 0 0 10087 0 0 11302 0 0 10093 0 0 12898 0 0 13067 0 0 16777 0 0 13014 0 0 93134 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 6 0 0 436730000 436730000 0 0 NaN 4733 1723 572 572 1578 1662;1663 1796;1797;1798 1994;1995;1996;1997;1998;1999 1798 1999 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17761 1798 1999 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17761 1798 1999 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17761 Q96PK6 206 Q96PK6 Q96PK6 RNA-binding protein 14 RBM14 sp|Q96PK6|RBM14_HUMAN RNA-binding protein 14 OS=Homo sapiens GN=RBM14 PE=1 SV=2 1 169.33 2.00314E-06 169.33 136.72 169.33 1 T FGNSTGGFDGQARQPTPPFFGRDRSPLRRSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX QPT(1)PPFFGR QPT(169.33)PPFFGR 3 2 0.11139 188500 0 0 186740 0 0 186670 0 0 171360 0 0 179570 0 0 181740 0 0 178960 0 0 202110 0 0 218200 0 0 4154 0 0 178360 0 0 176320 0 0 187990 0 0 177050 0 0 182680 0 0 181970 0 0 183270 0 0 202060 0 0 213630 0 0 8588.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 544320000 544320000 0 0 NaN 4734 1723 206 206 3107 3295 3525 3908 3525 3908 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17237 3525 3908 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17237 3525 3908 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17237 Q96PS1 115 Q96PS1 Q96PS1 FANCD2 opposite strand protein FANCD2OS sp|Q96PS1|FACOS_HUMAN FANCD2 opposite strand protein OS=Homo sapiens GN=FANCD2OS PE=2 SV=1 0.986577 17.0964 0.0306123 47.302 11.76 47.302 2 T DSVFGRVITAQPPKWTGTFRVSDKSAFCKII X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPXXXXXXX WT(0.987)GT(0.701)FRVS(0.312)DK WT(17.1)GT(3.62)FRVS(-3.62)DK 2 2 -1.2555 0 27205 0 0 28228 0 0 26085 0 0 27208 0 0 16471 0 0 28560 0 0 19152 0 0 25202 0 0 29996 0 0 9682.6 0 0 25738 0 0 26660 0 0 26218 0 0 28020 0 0 17331 0 0 28543 0 0 19664 0 0 25701 0 0 29137 0 0 9700.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 33564000 0 33564000 0 NaN 4735 1724 115 115 5351 5700 6078 6756 6078 6756 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10162 6078 6756 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10162 6078 6756 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10162 Q96PS1 117 Q96PS1 Q96PS1 FANCD2 opposite strand protein FANCD2OS sp|Q96PS1|FACOS_HUMAN FANCD2 opposite strand protein OS=Homo sapiens GN=FANCD2OS PE=2 SV=1 0.701266 3.62205 0.0306123 47.302 11.76 47.302 2 T VFGRVITAQPPKWTGTFRVSDKSAFCKIISR X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX WT(0.987)GT(0.701)FRVS(0.312)DK WT(17.1)GT(3.62)FRVS(-3.62)DK 4 2 -1.2555 0 27205 0 0 28228 0 0 26085 0 0 27208 0 0 16471 0 0 28560 0 0 19152 0 0 25202 0 0 29996 0 0 9682.6 0 0 25738 0 0 26660 0 0 26218 0 0 28020 0 0 17331 0 0 28543 0 0 19664 0 0 25701 0 0 29137 0 0 9700.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 33564000 0 33564000 0 NaN 4736 1724 117 117 5351 5700 6078 6756 6078 6756 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10162 6078 6756 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10162 6078 6756 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10162 Q96QH2 344 Q96QH2 Q96QH2 PML-RARA-regulated adapter molecule 1 PRAM1 sp|Q96QH2|PRAM_HUMAN PML-RARA-regulated adapter molecule 1 OS=Homo sapiens GN=PRAM1 PE=1 SV=2 0.333333 0 6.22693E-07 139.3 116.06 139.3 T FPKKPPQPELGDLTRTSSEPEVSVLPKRPRP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX T(0.333)S(0.333)S(0.333)EPEVSVLPK T(0)S(0)S(0)EPEVS(-89.21)VLPK 1 3 -0.10496 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4737 1733 344 344 4956 5284 5627 6254 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16927 5627 6254 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16927 5627 6254 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16927 Q96QU8 204 Q96QU8 Q96QU8 Exportin-6 XPO6 sp|Q96QU8|XPO6_HUMAN Exportin-6 OS=Homo sapiens GN=XPO6 PE=1 SV=1 0.981867 19.1289 7.88394E-08 157.42 133.33 157.42 2 T GILETVWDKHSVTAATPPPSPTSGESGDLLS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPPPPPPP HS(0.001)VT(0.004)AAT(0.982)PPPS(0.142)PT(0.468)S(0.392)GES(0.01)GDLLSNLLQSPSSAK HS(-31.95)VT(-24.06)AAT(19.13)PPPS(-5.42)PT(0.78)S(-0.78)GES(-16.7)GDLLS(-64.06)NLLQS(-110.26)PS(-126.22)S(-130.85)AK 7 4 0.17374 0 5195.3 0 0 6296 0 0 6107.3 0 0 5864.1 0 0 5937.1 0 0 5969.4 0 0 6643.5 0 0 6383.6 0 0 7589.7 0 0 33372 0 0 4919.5 0 0 5945.1 0 0 6096.5 0 0 6049.1 0 0 6045.9 0 0 6046.8 0 0 6754.5 0 0 7392.8 0 0 7448.7 0 0 31572 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 15135000 0 15135000 0 NaN 4738 1736 204 204 1754 1852 1998 2227 1998 2227 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23051 1998 2227 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23051 1998 2227 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23051 Q96QU8 210 Q96QU8 Q96QU8 Exportin-6 XPO6 sp|Q96QU8|XPO6_HUMAN Exportin-6 OS=Homo sapiens GN=XPO6 PE=1 SV=1 0.468459 0.775399 7.88394E-08 157.42 133.33 157.42 T WDKHSVTAATPPPSPTSGESGDLLSNLLQSP X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXPPPPPPPPPPPPPPPPPPPPPPPPPPPP HS(0.001)VT(0.004)AAT(0.982)PPPS(0.142)PT(0.468)S(0.392)GES(0.01)GDLLSNLLQSPSSAK HS(-31.95)VT(-24.06)AAT(19.13)PPPS(-5.42)PT(0.78)S(-0.78)GES(-16.7)GDLLS(-64.06)NLLQS(-110.26)PS(-126.22)S(-130.85)AK 13 4 0.17374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4739 1736 210 210 1754 1852 1998 2227 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23051 1998 2227 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23051 1998 2227 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23051 Q96S44 8 Q96S44 Q96S44 TP53-regulating kinase TP53RK sp|Q96S44|PRPK_HUMAN TP53-regulating kinase OS=Homo sapiens GN=TP53RK PE=1 SV=2 0.783942 5.59713 8.42289E-05 109.91 93.222 109.91 1 T ________MAAARATTPADGEEPAPEAEALA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP AT(0.216)T(0.784)PADGEEPAPEAEALAAAR AT(-5.6)T(5.6)PADGEEPAPEAEALAAAR 3 3 2.3955 11281 0 0 10314 0 0 11264 0 0 11312 0 0 12399 0 0 11599 0 0 11718 0 0 14151 0 0 11929 0 0 20616 0 0 10675 0 0 9749.2 0 0 11356 0 0 11558 0 0 12506 0 0 11684 0 0 11966 0 0 14716 0 0 11761 0 0 19740 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 15627000 15627000 0 0 NaN 4740 1742 8 8 544 578 619 691 619 691 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15917 619 691 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15917 619 691 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15917 Q96SN8 1885 Q96SN8 Q96SN8 CDK5 regulatory subunit-associated protein 2 CDK5RAP2 sp|Q96SN8|CK5P2_HUMAN CDK5 regulatory subunit-associated protein 2 OS=Homo sapiens GN=CDK5RAP2 PE=1 SV=5 0.48852 0 0.0241011 80.984 66.826 80.984 T ARGNLELRPGGAHPGTCSPSRPGS_______ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPPPPXXXXXXX GNLELRPGGAHPGT(0.489)CS(0.489)PS(0.022)RPGS(0.001) GNLELRPGGAHPGT(0)CS(0)PS(-13.52)RPGS(-25.94) 14 3 -0.84197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4741 1750 1885 1885 1530 1611 1740 1933 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9843 1740 1933 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9843 1740 1933 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9843 Q96T37 568 Q96T37 Q96T37 Putative RNA-binding protein 15 RBM15 sp|Q96T37|RBM15_HUMAN Putative RNA-binding protein 15 OS=Homo sapiens GN=RBM15 PE=1 SV=2 1 74.3719 0.00247081 99.498 67.194 99.498 1 T FGHRAPDPLRGARDRTPPLLYRDRDRDLYPD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX DRT(1)PPLLYR DRT(74.37)PPLLY(-74.37)R 3 3 -0.30297 18937 0 0 19358 0 0 18869 0 0 17735 0 0 18441 0 0 16745 0 0 19411 0 0 18852 0 0 20592 0 0 4537.8 0 0 17919 0 0 18278 0 0 19000 0 0 18293 0 0 18754 0 0 16864 0 0 19744 0 0 18965 0 0 20268 0 0 4709.2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 283680000 283680000 0 0 NaN 4742 1755 568 568 798 846 902 993;994 902 993 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12922 902 993 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12922 902 993 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12922 Q99081 313 Q99081 Q99081 Transcription factor 12 TCF12 sp|Q99081|HTF4_HUMAN Transcription factor 12 OS=Homo sapiens GN=TCF12 PE=1 SV=1 0.969888 15.0799 8.88063E-12 193.97 177.04 193.97 1 T HRGSTSSSPYVAASHTPPINGSDSILGTRGN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPPPPPPPPPPXX GSTSSSPYVAAS(0.03)HT(0.97)PPINGSDSILGTR GS(-108.93)T(-109.49)S(-97.82)S(-91.51)S(-84.42)PY(-114.59)VAAS(-15.08)HT(15.08)PPINGS(-62.89)DS(-79.63)ILGT(-115.33)R 14 3 0.04985 3558.6 0 0 4261 0 0 3840.1 0 0 4471.8 0 0 4755.1 0 0 4386 0 0 8512.1 0 0 6173 0 0 4347.3 0 0 15773 0 0 3368.4 0 0 4026.4 0 0 3868.9 0 0 4577.3 0 0 4820.6 0 0 4452.2 0 0 8370.1 0 0 6598 0 0 4466.1 0 0 14995 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14095000 14095000 0 0 NaN 4743 1761 313 313 1643 1731 1870 2083 1870 2083 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15683 1870 2083 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15683 1870 2083 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15683 Q99442 158 Q99442 Q99442 Translocation protein SEC62 SEC62 sp|Q99442|SEC62_HUMAN Translocation protein SEC62 OS=Homo sapiens GN=SEC62 PE=1 SV=1 0.998929 29.6988 0.0015048 110.39 57.809 110.39 1 T KDGEKEESKKEETPGTPKKKETKKKFKLEPH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX EET(0.001)PGT(0.999)PK EET(-29.7)PGT(29.7)PK 6 2 1.0087 92162 0 0 77055 0 0 105910 0 0 77746 0 0 81512 0 0 102670 0 0 82551 0 0 83269 0 0 83007 0 0 12049 0 0 87261 0 0 72795 0 0 105560 0 0 80185 0 0 84175 0 0 101580 0 0 83993 0 0 84640 0 0 81884 0 0 13273 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 142470000 142470000 0 0 NaN 4744 1764 158 158 939;2041 993;2160 1077;2327 1189;2594 1077 1189 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7755 1077 1189 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7755 1077 1189 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7755 Q99460 273 Q99460 Q99460 26S proteasome non-ATPase regulatory subunit 1 PSMD1 sp|Q99460|PSMD1_HUMAN 26S proteasome non-ATPase regulatory subunit 1 OS=Homo sapiens GN=PSMD1 PE=1 SV=2 0.784635 5.62411 5.293E-12 177.8 148.46 177.8 1 T QQFLSSVIQNLRTVGTPIASVPGSTNTGTVP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP T(0.215)VGT(0.785)PIASVPGSTNTGTVPGSEK T(-5.62)VGT(5.62)PIAS(-32.37)VPGS(-92.91)T(-115.74)NT(-136.96)GT(-141.87)VPGS(-162.55)EK 4 3 -0.026261 12101 0 0 14652 0 0 14197 0 0 12567 0 0 10278 0 0 12265 0 0 11382 0 0 12659 0 0 14437 0 0 10556 0 0 11458 0 0 13830 0 0 14129 0 0 13026 0 0 10680 0 0 12332 0 0 11617 0 0 13001 0 0 14116 0 0 10233 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 84108000 84108000 0 0 NaN 4745 1766 273 273 5006 5336 5686 6316 5686 6316 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15580 5686 6316 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15580 5686 6316 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15580 Q99569 283 Q99569 Q99569 Plakophilin-4 PKP4 sp|Q99569|PKP4_HUMAN Plakophilin-4 OS=Homo sapiens GN=PKP4 PE=1 SV=2 0.499932 0 9.44804E-05 111.68 83.357 111.68 1 T AARAASPYSQRPASPTAIRRIGSVTSRQTSN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AASPYSQRPAS(0.5)PT(0.5)AIR AAS(-46.31)PY(-78.69)S(-36.08)QRPAS(0)PT(0)AIR 13 3 0.24249 21818 0 0 23199 0 0 22009 0 0 22865 0 0 16471 0 0 22384 0 0 15331 0 0 20615 0 0 24653 0 0 15437 0 0 20646 0 0 21914 0 0 22081 0 0 23489 0 0 17035 0 0 22465 0 0 15916 0 0 21212 0 0 23930 0 0 15013 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23706000 23706000 0 0 NaN 4746 1773 283 283 74 79 87 100 87 100 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9817 87 100 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9817 87 100 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9817 Q99700 741 Q99700 Q99700 Ataxin-2 ATXN2 sp|Q99700|ATX2_HUMAN Ataxin-2 OS=Homo sapiens GN=ATXN2 PE=1 SV=2 0.822562 6.70759 0.000205929 130.09 64.745 130.09 1 T AASPTPASPASNRAVTPSSEAKDSRLQDQRQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPXXXXXXXXX AVT(0.823)PS(0.176)S(0.002)EAK AVT(6.71)PS(-6.71)S(-26.4)EAK 3 2 0.092687 23518 0 0 39200 0 0 26034 0 0 34855 0 0 18554 0 0 22252 0 0 21772 0 0 26439 0 0 36560 0 0 5730.7 0 0 22263 0 0 37006 0 0 25984 0 0 35850 0 0 19329 0 0 22931 0 0 22412 0 0 26531 0 0 35447 0 0 6008 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 61176000 61176000 0 0 NaN 4747 1784 741 741 573 611 652 727 652 727 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8832 652 727 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8832 652 727 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8832 Q99700 666 Q99700 Q99700 Ataxin-2 ATXN2 sp|Q99700|ATX2_HUMAN Ataxin-2 OS=Homo sapiens GN=ATXN2 PE=1 SV=2 0.489364 0 5.08604E-07 147.49 119.21 147.49 T SHNPPSEAATPPVARTSPSGGTWSSVVSGVP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP T(0.489)S(0.489)PS(0.021)GGTWSSVVSGVPR T(0)S(0)PS(-13.63)GGT(-41.13)WS(-81.77)S(-98.44)VVS(-127.12)GVPR 1 3 -0.083818 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4748 1784 666 666 4942;4943 5267;5268;5269 5610 6235 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18213 5610 6235 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18213 5610 6235 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18213 Q9BPZ7 509 Q9BPZ7 Q9BPZ7 Target of rapamycin complex 2 subunit MAPKAP1 MAPKAP1 sp|Q9BPZ7|SIN1_HUMAN Target of rapamycin complex 2 subunit MAPKAP1 OS=Homo sapiens GN=MAPKAP1 PE=1 SV=2 0.962781 14.2578 0.00138875 123.2 82.767 102.62 1 T RADYFAQKQRKLNRRTSFSFQKEKKSGQQ__ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPXXXXXXXXX T(0.963)S(0.036)FS(0.001)FQK T(14.26)S(-14.26)FS(-29.43)FQK 1 2 0.49608 64231 0 0 71266 0 0 68009 0 0 65969 0 0 112630 0 0 63937 0 0 127350 0 0 96329 0 0 74940 0 0 22170 0 0 60793 0 0 67292 0 0 68838 0 0 68026 0 0 111820 0 0 64625 0 0 127490 0 0 96038 0 0 76166 0 0 23105 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 125560000 125560000 0 0 NaN 4749 1800 509 509 3532;4911 3749;5236 3995;5579 4435;6201 5579 6201 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16801 3995 4435 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14149 3995 4435 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14149 Q9BQA1 5 Q9BQA1 Q9BQA1 Methylosome protein 50 WDR77 sp|Q9BQA1|MEP50_HUMAN Methylosome protein 50 OS=Homo sapiens GN=WDR77 PE=1 SV=1 1 101.493 2.13876E-06 140.46 122.13 101.49 1 T ___________MRKETPPPLVPPAAREWNLP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPXXXXX MRKET(1)PPPLVPPAAR MRKET(101.49)PPPLVPPAAR 5 4 -0.083344 74980 0 0 94826 0 0 64485 0 0 88859 0 0 56622 0 0 68653 0 0 49531 0 0 75052 0 0 89596 0 0 7380.1 0 0 70911 0 0 89545 0 0 65426 0 0 91277 0 0 57862 0 0 69811 0 0 51856 0 0 75257 0 0 86705 0 0 8686.2 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 207060000 207060000 0 0 NaN 4750 1803 5 5 2050;2738 2169;2904 2336;2337;3114 2603;2604;3461 3114 3461 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13624 2337 2604 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14177 2337 2604 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14177 Q9BRD0 159 Q9BRD0 Q9BRD0 BUD13 homolog BUD13 sp|Q9BRD0|BUD13_HUMAN BUD13 homolog OS=Homo sapiens GN=BUD13 PE=1 SV=1 1 130.565 0.000161328 130.56 98.344 130.56 2 T RHDTPDPSPRRARHDTPDPSPLRGARHDSDT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX HDT(1)PDPS(1)PLR HDT(130.56)PDPS(130.56)PLR 3 2 -0.55705 0 29048 0 0 27407 0 0 27854 0 0 29018 0 0 27895 0 0 31124 0 0 25880 0 0 29400 0 0 30547 0 0 9319.9 0 0 27482 0 0 25900 0 0 28113 0 0 29730 0 0 28281 0 0 31099 0 0 26568 0 0 29838 0 0 29943 0 0 9456.2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 41588000 0 41588000 0 NaN 4751 1810 159 159 1705 1798 1942 2164;2165 1942 2164 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8451 1942 2164 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8451 1942 2164 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8451 Q9BRL6 25 Q9BRL6 Q9BRL6 Serine/arginine-rich splicing factor 8 SRSF8 sp|Q9BRL6|SRSF8_HUMAN Serine/arginine-rich splicing factor 8 OS=Homo sapiens GN=SRSF8 PE=1 SV=1 0.954882 13.2577 0.00081863 115.78 41.317 115.78 1 T VDGMITLKVDNLTYRTSPDSLRRVFEKYGRV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX T(0.955)S(0.045)PDSLRR T(13.26)S(-13.26)PDS(-47.26)LRR 1 2 0.12739 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4752 1811 25 25 4930 5255 5598 6221 5598 6221 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6515 5598 6221 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6515 5598 6221 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6515 Q9BSI4 297 Q9BSI4 Q9BSI4 TERF1-interacting nuclear factor 2 TINF2 sp|Q9BSI4|TINF2_HUMAN TERF1-interacting nuclear factor 2 OS=Homo sapiens GN=TINF2 PE=1 SV=1 0.700664 3.73357 0.00022396 119.27 105.16 119.27 1 T RPTVMLFPFRNLGSPTQVISKPESKEEHAIY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPXXXXXX NLGS(0.297)PT(0.701)QVIS(0.003)KPESK NLGS(-3.73)PT(3.73)QVIS(-24.06)KPES(-69.73)K 6 3 0.049791 13136 0 0 13031 0 0 13376 0 0 12882 0 0 12353 0 0 13512 0 0 12254 0 0 13156 0 0 13918 0 0 13327 0 0 12431 0 0 12309 0 0 13442 0 0 13246 0 0 12596 0 0 13536 0 0 12524 0 0 13611 0 0 13663 0 0 12854 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11741000 11741000 0 0 NaN 4753 1816 297 297 2849 3019 3233 3588 3233 3588 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15444 3233 3588 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15444 3233 3588 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15444 Q9BTE3 160 Q9BTE3 Q9BTE3 Mini-chromosome maintenance complex-binding protein MCMBP sp|Q9BTE3|MCMBP_HUMAN Mini-chromosome maintenance complex-binding protein OS=Homo sapiens GN=MCMBP PE=1 SV=2 0.965528 15.8171 0.0182109 74.216 49.834 74.216 1 T YVNANQARVSPSTSYTPSRHKRSYEDDDDMD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX VSPS(0.001)T(0.002)S(0.006)YT(0.966)PS(0.025)R VS(-44.97)PS(-32.83)T(-26.86)S(-21.82)Y(-34.99)T(15.82)PS(-15.82)R 8 2 -2.0664 72900 0 0 42241 0 0 71836 0 0 40933 0 0 35800 0 0 76899 0 0 42473 0 0 53616 0 0 46294 0 0 12669 0 0 68978 0 0 39896 0 0 71967 0 0 42687 0 0 38556 0 0 75207 0 0 43018 0 0 55065 0 0 45516 0 0 13170 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 16108000 16108000 0 0 NaN 4754 1823 160 160 5268 5614 5984 6648;6649 5984 6648 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9290 5984 6648 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9290 5984 6648 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9290 Q9BTY7 390 Q9BTY7 Q9BTY7 Protein HGH1 homolog HGH1 sp|Q9BTY7|HGH1_HUMAN Protein HGH1 homolog OS=Homo sapiens GN=HGH1 PE=1 SV=1 0.611883 1.97706 0.026187 63.709 40.333 63.709 1 T ERELAPEPWVERATPT_______________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPXXXXXXXXXXXXXXX ELAPEPWVERAT(0.388)PT(0.612) ELAPEPWVERAT(-1.98)PT(1.98) 14 2 0.22769 9069 0 0 8861 0 0 10202 0 0 9931 0 0 8677.8 0 0 10188 0 0 8187.8 0 0 10286 0 0 10068 0 0 28247 0 0 8585.9 0 0 8376.8 0 0 10188 0 0 10136 0 0 8891.1 0 0 10255 0 0 8409.5 0 0 11165 0 0 9854.6 0 0 26836 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11524000 11524000 0 0 NaN 4755 1829 390 390 1022 1078 1166 1285 1166 1285 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18426 1166 1285 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18426 1166 1285 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18426 Q9BVC5 198 Q9BVC5 Q9BVC5 Ashwin C2orf49 sp|Q9BVC5|ASHWN_HUMAN Ashwin OS=Homo sapiens GN=C2orf49 PE=1 SV=1 0.956384 13.4099 0.000108948 123.63 93.421 123.63 1 T PSGPVKSPPLSPVGTTPVKLKRAAPKEEAEA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX SPPLSPVGT(0.044)T(0.956)PVK S(-92.4)PPLS(-97.8)PVGT(-13.41)T(13.41)PVK 10 3 0.25899 8356.9 0 0 7129.8 0 0 9272.5 0 0 7665.4 0 0 5435.9 0 0 10071 0 0 5945.8 0 0 6815.5 0 0 8739.7 0 0 3061.5 0 0 7911.2 0 0 6738.4 0 0 9238.2 0 0 7876.5 0 0 5752.7 0 0 9952.5 0 0 6104.4 0 0 7054.9 0 0 8504.9 0 0 3040.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12710000 12710000 0 0 NaN 4756 1840 198 198 4142 4415 4706 5222 4706 5222 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15724 4706 5222 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15724 4706 5222 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15724 Q9BW71 84 Q9BW71 Q9BW71 HIRA-interacting protein 3 HIRIP3 sp|Q9BW71|HIRP3_HUMAN HIRA-interacting protein 3 OS=Homo sapiens GN=HIRIP3 PE=1 SV=3 1 55.0972 0.028937 55.097 49.627 55.097 2 T REDKLDLTKKGKRPPTPCSDPERKRFRFNSE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX RPPT(1)PCS(1)DPER RPPT(55.1)PCS(55.1)DPER 4 3 -1.8225 0 6153.2 0 0 6626.2 0 0 7234.8 0 0 7316.2 0 0 8856.9 0 0 6871.3 0 0 7590.5 0 0 7165.3 0 0 6860.9 0 0 2154.3 0 0 5826.6 0 0 6263.5 0 0 7240.3 0 0 7462.8 0 0 8873.7 0 0 6915 0 0 7767.3 0 0 7240.8 0 0 6800.6 0 0 2194.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 6451200 0 6451200 0 NaN 4757 1849 84 84 3400 3612 3853 4278 3853 4278 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6917 3853 4278 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6917 3853 4278 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6917 Q9BYG3 238 Q9BYG3 Q9BYG3 MKI67 FHA domain-interacting nucleolar phosphoprotein NIFK sp|Q9BYG3|MK67I_HUMAN MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Homo sapiens GN=NIFK PE=1 SV=1 0.963611 14.3202 2.89127E-07 149.12 125.08 149.12 1 T TPEKTVDSQGPTPVCTPTFLERRKSQVAELN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPXXXXXXXXX TVDSQGPT(0.001)PVCT(0.964)PT(0.036)FLER T(-97.54)VDS(-85.72)QGPT(-31.07)PVCT(14.32)PT(-14.32)FLER 12 3 -0.015693 6292.4 0 0 5444.6 0 0 6488.8 0 0 5557.6 0 0 4647.1 0 0 5787.5 0 0 5208.6 0 0 5800.9 0 0 5610.9 0 0 13399 0 0 5955 0 0 5144 0 0 6501.1 0 0 5703.1 0 0 4833 0 0 5816.2 0 0 5286 0 0 6221.9 0 0 5519.2 0 0 12751 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9215200 9215200 0 0 NaN 4758 1871 238 238 5002 5332 5682 6312 5682 6312 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17884 5682 6312 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17884 5682 6312 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17884 Q9BYW2 1853 Q9BYW2 Q9BYW2 Histone-lysine N-methyltransferase SETD2 SETD2 sp|Q9BYW2|SETD2_HUMAN Histone-lysine N-methyltransferase SETD2 OS=Homo sapiens GN=SETD2 PE=1 SV=3 0.999999 59.9746 9.26759E-07 142.32 121.94 142.32 1 T SEGDGYSSENTSRAHTPLNTPDPSTKLSTEA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPXXXXX AHT(1)PLNTPDPSTK AHT(59.97)PLNT(-59.97)PDPS(-114.09)T(-117.02)K 3 3 2.8979 16373 0 0 16414 0 0 17051 0 0 14559 0 0 13844 0 0 17602 0 0 17126 0 0 15786 0 0 16021 0 0 5456.8 0 0 15495 0 0 15495 0 0 17097 0 0 15111 0 0 14284 0 0 17495 0 0 17245 0 0 16069 0 0 15855 0 0 5503.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27241000 27241000 0 0 NaN 4759 1872 1853 1853 244 260 278 309 278 309 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9589 278 309 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9589 278 309 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9589 Q9GZT3 101 Q9GZT3 Q9GZT3 SRA stem-loop-interacting RNA-binding protein, mitochondrial SLIRP sp|Q9GZT3|SLIRP_HUMAN SRA stem-loop-interacting RNA-binding protein, mitochondrial OS=Homo sapiens GN=SLIRP PE=1 SV=1 0.672435 3.12353 0.0464674 62.104 40.646 62.104 1 T GVKVQVHTRRPKLPQTSDDEKKDF_______ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX LPQT(0.672)S(0.328)DDEKKDF LPQT(3.12)S(-3.12)DDEKKDF 4 3 -0.83942 17681 0 0 19385 0 0 17413 0 0 19142 0 0 20812 0 0 17578 0 0 28387 0 0 23451 0 0 21060 0 0 11403 0 0 16730 0 0 18311 0 0 17605 0 0 19644 0 0 21019 0 0 17784 0 0 28331 0 0 23639 0 0 21091 0 0 11280 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26253000 26253000 0 0 2.1511 4760 1892 101 101 2505 2646 2841 3169 2841 3169 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15910 2841 3169 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15910 2841 3169 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15910 Q9H0H5 580 Q9H0H5 Q9H0H5 Rac GTPase-activating protein 1 RACGAP1 sp|Q9H0H5|RGAP1_HUMAN Rac GTPase-activating protein 1 OS=Homo sapiens GN=RACGAP1 PE=1 SV=1 0.897246 9.41115 7.05752E-07 148.52 112.13 148.52 1 T PQTPDIKVSLLGPVTTPEHQLLKTPSSSSLS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPXXXXXXXX VSLLGPVT(0.103)T(0.897)PEHQLLK VS(-64.48)LLGPVT(-9.41)T(9.41)PEHQLLK 9 3 0.50699 5607.5 0 0 7722.8 0 0 6483.3 0 0 7679.7 0 0 5068.3 0 0 4747 0 0 5826.2 0 0 6765.6 0 0 7800.6 0 0 17180 0 0 5309.4 0 0 7295.2 0 0 6462 0 0 7840.8 0 0 5239.5 0 0 4946.7 0 0 5948.2 0 0 7225.9 0 0 7613.2 0 0 16334 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12646000 12646000 0 0 NaN 4761 1905 580 580 5252 5598 5968 6632 5968 6632 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21434 5968 6632 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21434 5968 6632 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21434 Q9H1E3 179 Q9H1E3 Q9H1E3 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 NUCKS1 sp|Q9H1E3|NUCKS_HUMAN Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 OS=Homo sapiens GN=NUCKS1 PE=1 SV=1 0.997361 25.7736 2.96091E-05 134.49 113.59 134.49 2 T RKEKKMPKPRLKATVTPSPVKGKGKVGRPTA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX AT(0.003)VT(0.997)PS(1)PVKGK AT(-25.77)VT(25.77)PS(56.89)PVKGK 4 2 1.2521 0 28513 0 0 25938 0 0 29419 0 0 25002 0 0 26150 0 0 26950 0 0 25394 0 0 27458 0 0 27538 0 0 55577 0 0 26984 0 0 24497 0 0 29530 0 0 25760 0 0 26722 0 0 27038 0 0 25944 0 0 29198 0 0 27081 0 0 52968 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 24049000 0 24049000 0 NaN 4762 1913 179 179 546;547;2414 580;581;582;583;2551 622;624 695;697 624 697 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11372 624 697 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11372 624 697 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11372 Q9H2Y7 640 Q9H2Y7 Q9H2Y7 Zinc finger protein 106 ZNF106 sp|Q9H2Y7|ZN106_HUMAN Zinc finger protein 106 OS=Homo sapiens GN=ZNF106 PE=1 SV=1 0.748639 5.09247 0.00025695 108.53 78.359 108.53 1 T KEEDDRILKTSRELSTSPCNPIVRQKESELQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPXXXXXXX ELS(0.02)T(0.749)S(0.232)PCNPIVR ELS(-15.82)T(5.09)S(-5.09)PCNPIVR 4 2 0.77024 17786 0 0 17859 0 0 19113 0 0 18542 0 0 13579 0 0 18307 0 0 9922.3 0 0 13861 0 0 15695 0 0 29243 0 0 16835 0 0 16875 0 0 19095 0 0 18992 0 0 14060 0 0 18360 0 0 10434 0 0 14957 0 0 15241 0 0 27857 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 39163000 39163000 0 0 NaN 4763 1925 640 640 1057 1113 1201 1320 1201 1320 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14595 1201 1320 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14595 1201 1320 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14595 Q9H3P2 157 Q9H3P2 Q9H3P2 Negative elongation factor A NELFA sp|Q9H3P2|NELFA_HUMAN Negative elongation factor A OS=Homo sapiens GN=NELFA PE=1 SV=3 1 90.872 8.15515E-07 152.04 125.01 152.04 1 T QYLNKNALTTLAGPLTPPVKHFQLKRKPKSA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPXXXXXXXXXXX NALTTLAGPLT(1)PPVK NALT(-98.85)T(-90.87)LAGPLT(90.87)PPVK 11 3 -0.20041 3934.6 0 0 5221.6 0 0 3558.7 0 0 3555.1 0 0 3887.3 0 0 3468.7 0 0 3866.5 0 0 5058.3 0 0 5554.8 0 0 9171.7 0 0 3721.8 0 0 4923.2 0 0 3609 0 0 3750.6 0 0 3926.7 0 0 3517.9 0 0 3983 0 0 5288.6 0 0 5409.3 0 0 8753.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10414000 10414000 0 0 NaN 4764 1932 157 157 2775 2944 3154 3504 3154 3504 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21284 3154 3504 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21284 3154 3504 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21284 Q9H6Z4 124 Q9H6Z4 Q9H6Z4 Ran-binding protein 3 RANBP3 sp|Q9H6Z4|RANB3_HUMAN Ran-binding protein 3 OS=Homo sapiens GN=RANBP3 PE=1 SV=1 0.354318 0 0.00544775 92.236 67.3 92.236 T DREDGNYCPPVKRERTSSLTQFPPSQSEERS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPX T(0.354)S(0.354)S(0.271)LT(0.021)QFPPSQSEER T(0)S(0)S(-1.17)LT(-12.32)QFPPS(-87.36)QS(-87.6)EER 1 3 -0.87448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4765 1948 124 124 4964 5292 5636 6265 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14366 5636 6265 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14366 5636 6265 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14366 Q9H7N4 989 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 SCAF1 sp|Q9H7N4|SFR19_HUMAN Splicing factor, arginine/serine-rich 19 OS=Homo sapiens GN=SCAF1 PE=1 SV=3 0.999981 47.297 4.32058E-16 226.71 209.49 226.71 1 T PSTPPPKAAPPPPALTPDSQTVDSSCKTPEV X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPPXXXX AAPPPPALT(1)PDSQTVDSSCK AAPPPPALT(47.3)PDS(-47.3)QT(-96.01)VDS(-136.24)S(-142.39)CK 9 3 1.6244 21903 0 0 20008 0 0 22507 0 0 20773 0 0 19134 0 0 23663 0 0 20531 0 0 22685 0 0 20712 0 0 19661 0 0 20728 0 0 18905 0 0 22590 0 0 21329 0 0 19636 0 0 23614 0 0 20836 0 0 23385 0 0 20429 0 0 19038 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 20491000 20491000 0 0 NaN 4766 1953 989 989 50 54 59 70;71 59 70 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13789 59 70 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13789 59 70 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13789 Q9H7N4 976 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 SCAF1 sp|Q9H7N4|SFR19_HUMAN Splicing factor, arginine/serine-rich 19 OS=Homo sapiens GN=SCAF1 PE=1 SV=3 0.5 0 0.00774427 80.688 58.696 80.688 1 T ETSWSGEERAAKVPSTPPPKAAPPPPALTPD X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VPS(0.5)T(0.5)PPPK VPS(0)T(0)PPPK 4 3 0.14087 11525 0 0 10918 0 0 13484 0 0 9932.5 0 0 10768 0 0 12562 0 0 10905 0 0 10968 0 0 11155 0 0 1444 0 0 10913 0 0 10308 0 0 13432 0 0 10301 0 0 11090 0 0 12457 0 0 11101 0 0 11107 0 0 10996 0 0 1613.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18063000 18063000 0 0 NaN 4767 1953 976 976 5214 5558 5922 6580 5922 6580 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11302 5922 6580 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11302 5922 6580 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11302 Q9H813 8 Q9H813 Q9H813 Transmembrane protein 206 TMEM206 sp|Q9H813|TM206_HUMAN Transmembrane protein 206 OS=Homo sapiens GN=TMEM206 PE=1 SV=1 0.356394 0 2.11891E-25 261.81 232.54 261.81 T ________MIRQERSTSYQELSEELVQVVEN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.356)T(0.356)S(0.286)Y(0.001)QELSEELVQVVENSELADEQDKETVR S(0)T(0)S(-0.95)Y(-25.21)QELS(-66.6)EELVQVVENS(-232.7)ELADEQDKET(-256.29)VR 2 4 -0.16698 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4768 1955 8 8 4537 4839 5156 5725 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23738 5156 5725 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23738 5156 5725 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23738 Q9H8G2 90 Q9H8G2 Q9H8G2 Caspase activity and apoptosis inhibitor 1 CAAP1 sp|Q9H8G2|CAAP1_HUMAN Caspase activity and apoptosis inhibitor 1 OS=Homo sapiens GN=CAAP1 PE=1 SV=2 0.53439 2.9217 2.16808E-31 308.93 295.5 308.93 1 T GGSSVERSERRKRRSTDSSSVSGSLQQETKY X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPX S(0.273)T(0.534)DS(0.192)S(0.001)SVSGSLQQETK S(-2.92)T(2.92)DS(-4.44)S(-29.27)S(-46.39)VS(-121.53)GS(-148.5)LQQET(-294.78)K 2 3 -0.58433 20047 0 0 12923 0 0 21772 0 0 12505 0 0 16424 0 0 21689 0 0 16930 0 0 17688 0 0 15102 0 0 9024.9 0 0 18976 0 0 12205 0 0 21759 0 0 13013 0 0 16989 0 0 21297 0 0 17159 0 0 18169 0 0 14979 0 0 8907.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 35605000 35605000 0 0 NaN 4769 1958 90 90 4498 4790 5102 5666 5102 5666 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11614 5102 5666 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11614 5102 5666 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11614 Q9H8Y8 222 Q9H8Y8 Q9H8Y8 Golgi reassembly-stacking protein 2 GORASP2 sp|Q9H8Y8|GORS2_HUMAN Golgi reassembly-stacking protein 2 OS=Homo sapiens GN=GORASP2 PE=1 SV=3 0.999637 34.4027 0.000129706 115.42 96.823 115.42 1 T FEEGKKISLPGQMAGTPITPLKDGFTEVQLS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPXXXXXXXXX ISLPGQMAGT(1)PITPLK IS(-62.63)LPGQMAGT(34.4)PIT(-34.4)PLK 10 3 0.38896 2713.8 0 0 4114.6 0 0 2729.3 0 0 3964 0 0 6430.7 0 0 2596.2 0 0 6000.7 0 0 4732.2 0 0 4173.4 0 0 12608 0 0 2568 0 0 3886.1 0 0 2791.9 0 0 4057.3 0 0 6299.5 0 0 2713.9 0 0 6078.8 0 0 5043.8 0 0 4195.4 0 0 11982 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 4664100 4664100 0 0 NaN 4770 1964 222 222 1941 2051 2213 2474 2213 2474 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22489 2213 2474 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22489 2213 2474 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22489 Q9H8Y8 433 Q9H8Y8 Q9H8Y8 Golgi reassembly-stacking protein 2 GORASP2 sp|Q9H8Y8|GORS2_HUMAN Golgi reassembly-stacking protein 2 OS=Homo sapiens GN=GORASP2 PE=1 SV=3 0.677478 5.84298 3.14902E-17 219.95 206.47 219.95 1 T TAKAPTTVEDRVGDSTPVSEKPVSAAVDANA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP VGDS(0.13)T(0.677)PVS(0.176)EKPVS(0.016)AAVDANASESP VGDS(-7.18)T(5.84)PVS(-5.84)EKPVS(-16.16)AAVDANAS(-65.17)ES(-64.22)P 5 3 0.58403 5113.5 0 0 10152 0 0 4272.1 0 0 10052 0 0 8853.1 0 0 5915.7 0 0 10871 0 0 8799.2 0 0 9710.4 0 0 28503 0 0 4835.5 0 0 9590 0 0 4410 0 0 10260 0 0 8741.1 0 0 6204 0 0 10937 0 0 9573.3 0 0 9630.5 0 0 27043 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29382000 29382000 0 0 NaN 4771 1964 433 433 5111 5448 5803 6452 5803 6452 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15587 5803 6452 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15587 5803 6452 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15587 Q9H910 61 Q9H910 Q9H910 Hematological and neurological expressed 1-like protein HN1L sp|Q9H910|HN1L_HUMAN Hematological and neurological expressed 1-like protein OS=Homo sapiens GN=HN1L PE=1 SV=1 0.566563 1.16329 4.9325E-05 117.73 96.331 117.73 1 T NIFGPTEEPQNIPKRTNPPGGKGSGIFDEST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP RT(0.567)NPPGGKGS(0.433)GIFDESTPVQTR RT(1.16)NPPGGKGS(-1.16)GIFDES(-51.7)T(-51.93)PVQT(-71.85)R 2 4 0.56658 9805.4 0 0 17455 0 0 10380 0 0 18194 0 0 11358 0 0 12427 0 0 12014 0 0 12966 0 0 14469 0 0 5966.1 0 0 9280.6 0 0 16493 0 0 10432 0 0 18544 0 0 11480 0 0 12732 0 0 12265 0 0 13165 0 0 14172 0 0 5917.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 35021000 35021000 0 0 NaN 4772 1965 61 61 3521;4808 3738;5128 3984 4423 3984 4423 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13094 3984 4423 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13094 3984 4423 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13094 Q9HC35 899 Q9HC35 Q9HC35 Echinoderm microtubule-associated protein-like 4 EML4 sp|Q9HC35|EMAL4_HUMAN Echinoderm microtubule-associated protein-like 4 OS=Homo sapiens GN=EML4 PE=1 SV=3 0.994862 22.9465 4.61602E-12 198.15 188.34 198.15 1 T APVSSTESVIQSNTPTPPPSQPLNETAEEES X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP APVSSTESVIQSNT(0.005)PT(0.995)PPPSQPLNETAEEESR APVS(-103.58)S(-97.33)T(-90.94)ES(-82.27)VIQS(-41.06)NT(-22.95)PT(22.95)PPPS(-48.99)QPLNET(-110.78)AEEES(-136.63)R 16 4 -1.0797 3074.8 0 0 2269.6 0 0 3670.3 0 0 2919.9 0 0 4422.7 0 0 2724.7 0 0 4093.9 0 0 3557.6 0 0 3068.4 0 0 14069 0 0 2911.8 0 0 2147.7 0 0 3670.1 0 0 2955.2 0 0 4438.1 0 0 2776.8 0 0 4154.9 0 0 3960.2 0 0 3071.1 0 0 13330 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14934000 14934000 0 0 NaN 4773 1981 899 899 388 415 450 499 450 499 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15890 450 499 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15890 450 499 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15890 Q9HCM7 1010 Q9HCM7 Q9HCM7 Fibrosin-1-like protein FBRSL1 sp|Q9HCM7|FBSL_HUMAN Fibrosin-1-like protein OS=Homo sapiens GN=FBRSL1 PE=1 SV=4 0.988755 19.4414 0.0214525 67.829 49.465 67.829 1 T ALGAPPPLVTAAGPPTPPGPPRSRTTPLGGL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPXXXXXXXXX TPPAAAALGAPPPLVT(0.011)AAGPPT(0.989)PPGPPR T(-65.74)PPAAAALGAPPPLVT(-19.44)AAGPPT(19.44)PPGPPR 22 4 0.054592 2503.1 0 0 3183.5 0 0 2864.7 0 0 2757.7 0 0 2810.5 0 0 2386.7 0 0 3345.5 0 0 3727.5 0 0 2870.2 0 0 6676.8 0 0 2369.9 0 0 3004.9 0 0 2864.2 0 0 2851.6 0 0 2862.4 0 0 2438.2 0 0 3366.7 0 0 3888.2 0 0 2852.2 0 0 6373.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12185000 12185000 0 0 NaN 4774 1990 1010 1010 4831 5156 5495 6113 5495 6113 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20673 5495 6113 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20673 5495 6113 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20673 Q9NPF5 445 Q9NPF5 Q9NPF5 DNA methyltransferase 1-associated protein 1 DMAP1 sp|Q9NPF5|DMAP1_HUMAN DNA methyltransferase 1-associated protein 1 OS=Homo sapiens GN=DMAP1 PE=1 SV=1 0.992454 21.1899 7.37631E-07 147.28 133.31 147.28 1 T PDPKDTIIDVVGAPLTPNSRKRRESASSSSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPXXXXXXXXXXX DTIIDVVGAPLT(0.992)PNS(0.008)R DT(-118.15)IIDVVGAPLT(21.19)PNS(-21.19)R 12 3 -0.36065 3069.4 0 0 3721.3 0 0 2989.2 0 0 3165.7 0 0 3033.8 0 0 3693.6 0 0 3020.3 0 0 3384.8 0 0 3639 0 0 7069.6 0 0 2904.2 0 0 3512.2 0 0 3015.1 0 0 3292.9 0 0 3076.4 0 0 3688.1 0 0 3092 0 0 3620.2 0 0 3564.3 0 0 6735.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 108200000 108200000 0 0 NaN 4775 1996 445 445 825 873 929 1024 929 1024 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20953 929 1024 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20953 929 1024 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20953 Q9NQS7 892 Q9NQS7 Q9NQS7 Inner centromere protein INCENP sp|Q9NQS7|INCE_HUMAN Inner centromere protein OS=Homo sapiens GN=INCENP PE=1 SV=3 0.362948 0 0.000125861 120.9 87.215 120.9 T LEDIFKKSKPRYHKRTSSAVWNSPPLQGARV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPX T(0.363)S(0.363)S(0.274)AVWNSPPLQGAR T(0)S(0)S(-1.22)AVWNS(-80.29)PPLQGAR 1 3 0.62055 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4776 2008 892 892 4952 5280 5623 6250 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16538 5623 6250 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16538 5623 6250 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16538 Q9NRA8 257 Q9NRA8 Q9NRA8 Eukaryotic translation initiation factor 4E transporter EIF4ENIF1 sp|Q9NRA8|4ET_HUMAN Eukaryotic translation initiation factor 4E transporter OS=Homo sapiens GN=EIF4ENIF1 PE=1 SV=2 0.552622 0.917536 3.73793E-36 323.78 313.15 323.78 1 T ILEEDHKGRKRTRRRTASVKEGIVECNGGVA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP T(0.553)AS(0.447)VKEGIVECNGGVAEEDEVEVILAQEPAADQEVPR T(0.92)AS(-0.92)VKEGIVECNGGVAEEDEVEVILAQEPAADQEVPR 1 4 0.92458 458.51 0 0 585.26 0 0 911.32 0 0 1373.9 0 0 578.91 0 0 937.19 0 0 465.41 0 0 1680.2 0 0 476.2 0 0 22239 0 0 435.56 0 0 557.37 0 0 887.33 0 0 1355.5 0 0 605.52 0 0 1010.1 0 0 479.49 0 0 2326.7 0 0 469.41 0 0 20980 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6702100 6702100 0 0 NaN 4777 2014 257 257 4641 4952 5275 5861 5275 5861 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22447 5275 5861 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22447 5275 5861 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22447 Q9NS23 206 Q9NS23 Q9NS23 Ras association domain-containing protein 1 RASSF1 sp|Q9NS23|RASF1_HUMAN Ras association domain-containing protein 1 OS=Homo sapiens GN=RASSF1 PE=1 SV=1 0.68123 3.29817 0.00249852 107.47 63.953 107.47 1 T DARRGPGRGTSVRRRTSFYLPKDAVKHLHVL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPXXXXXXXXX T(0.681)S(0.319)FYLPK T(3.3)S(-3.3)FY(-63.33)LPK 1 2 0.32169 18318 0 0 20057 0 0 20178 0 0 21477 0 0 43401 0 0 19473 0 0 46586 0 0 33454 0 0 21259 0 0 12278 0 0 17341 0 0 18955 0 0 20502 0 0 21933 0 0 42693 0 0 19807 0 0 46574 0 0 33385 0 0 22050 0 0 12336 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 31269000 31269000 0 0 NaN 4778 2022 206 206 3533;4914 3750;5239 3996;5582 4436;6204 5582 6204 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19257 5582 6204 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19257 5582 6204 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19257 Q9NS56 205 Q9NS56 Q9NS56 E3 ubiquitin-protein ligase Topors TOPORS sp|Q9NS56|TOPRS_HUMAN E3 ubiquitin-protein ligase Topors OS=Homo sapiens GN=TOPORS PE=1 SV=1 0.73664 7.47736 3.20446E-06 138.08 118.69 138.08 1 T ASVYSPSGPVNRRTTTPPDSGVLFEGLGIST X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP T(0.132)T(0.132)T(0.737)PPDSGVLFEGLGISTRPR T(-7.48)T(-7.48)T(7.48)PPDS(-64.95)GVLFEGLGIS(-132.24)T(-132.24)RPR 3 3 1.2134 4561.9 0 0 4894.2 0 0 4009.2 0 0 4659.2 0 0 6170.2 0 0 3932.3 0 0 5230.9 0 0 5872.9 0 0 4938.7 0 0 22535 0 0 4314.7 0 0 4622 0 0 4093.5 0 0 4786.6 0 0 6120.4 0 0 4040.7 0 0 5361.7 0 0 6494.8 0 0 4885.4 0 0 21356 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10533000 10533000 0 0 NaN 4779 2023 205 205 4994 5323 5672 6301 5672 6301 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21446 5672 6301 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21446 5672 6301 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21446 Q9NSI8 76 Q9NSI8 Q9NSI8 SAM domain-containing protein SAMSN-1 SAMSN1 sp|Q9NSI8|SAMN1_HUMAN SAM domain-containing protein SAMSN-1 OS=Homo sapiens GN=SAMSN1 PE=1 SV=1 0.707561 3.83728 0.00618947 96.936 44.219 96.936 1 T NNGGGLGKKMRAISWTMKKKVGKKYIKALSE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX AIS(0.292)WT(0.708)MK AIS(-3.84)WT(3.84)MK 5 2 -0.45219 7915.9 0 0 25680 0 0 9167.8 0 0 25392 0 0 32357 0 0 7901.5 0 0 34822 0 0 21519 0 0 24231 0 0 8969.7 0 0 7495.2 0 0 24257 0 0 9448 0 0 25808 0 0 31492 0 0 8888.4 0 0 35037 0 0 21327 0 0 24358 0 0 8944.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 51457000 51457000 0 0 NaN 4780 2028 76 76 260 280;281 301 335 301 335 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19477 301 335 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19477 301 335 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19477 Q9NTI5 1370 Q9NTI5 Q9NTI5 Sister chromatid cohesion protein PDS5 homolog B PDS5B sp|Q9NTI5|PDS5B_HUMAN Sister chromatid cohesion protein PDS5 homolog B OS=Homo sapiens GN=PDS5B PE=1 SV=1 0.947934 12.6067 2.37469E-11 208.72 190.8 208.72 2 T RAESPESSAIESTQSTPQKGRGRPSKTPSPS X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X XPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX AES(0.999)PES(0.001)SAIESTQS(0.052)T(0.948)PQK AES(30.53)PES(-30.53)S(-51.02)AIES(-66.92)T(-42.82)QS(-12.61)T(12.61)PQK 15 3 -0.32308 0 15672 0 0 12970 0 0 17650 0 0 11941 0 0 18101 0 0 15184 0 0 20530 0 0 17920 0 0 12227 0 0 15999 0 0 14837 0 0 12247 0 0 17669 0 0 12376 0 0 18369 0 0 15140 0 0 20553 0 0 18351 0 0 12417 0 0 15480 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 19021000 0 19021000 0 NaN 4781 2031 1370 1370 160 166;167 180 204 180 204 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11805 180 204 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11805 180 204 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11805 Q9NTI5 1381 Q9NTI5 Q9NTI5 Sister chromatid cohesion protein PDS5 homolog B PDS5B sp|Q9NTI5|PDS5B_HUMAN Sister chromatid cohesion protein PDS5 homolog B OS=Homo sapiens GN=PDS5B PE=1 SV=1 0.588762 1.73541 0.0258658 67.685 46.732 67.685 2 T STQSTPQKGRGRPSKTPSPSQPKKNVRVGRS X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPXXXXXXXX GRPS(0.402)KT(0.589)PS(0.712)PS(0.297)QPK GRPS(-1.74)KT(1.74)PS(3.99)PS(-3.99)QPK 6 3 0.351 0 20674 0 0 10826 0 0 20433 0 0 10862 0 0 13450 0 0 22662 0 0 12134 0 0 14247 0 0 10670 0 0 3053.5 0 0 19562 0 0 10227 0 0 20500 0 0 11340 0 0 14042 0 0 22089 0 0 12374 0 0 14709 0 0 10590 0 0 3204.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 19421000 0 19421000 0 NaN 4782 2031 1381 1381 1590 1676 1812 2013 1812 2013 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7262 1812 2013 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7262 1812 2013 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7262 Q9NTJ3 39 Q9NTJ3 Q9NTJ3 Structural maintenance of chromosomes protein 4 SMC4 sp|Q9NTJ3|SMC4_HUMAN Structural maintenance of chromosomes protein 4 OS=Homo sapiens GN=SMC4 PE=1 SV=2 0.569491 1.21601 2.56849E-07 152.13 132.8 152.13 1 T DGASSDAEPEPPSGRTESPATAAETASEELD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP T(0.569)ES(0.43)PATAAETASEELDNR T(1.22)ES(-1.22)PAT(-37.76)AAET(-112.89)AS(-126.3)EELDNR 1 3 -0.85397 18873 0 0 18075 0 0 18003 0 0 20446 0 0 18087 0 0 17638 0 0 18673 0 0 20851 0 0 20395 0 0 19825 0 0 17855 0 0 17088 0 0 18180 0 0 20803 0 0 18359 0 0 17883 0 0 19027 0 0 21388 0 0 20050 0 0 19151 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 48567000 48567000 0 0 NaN 4783 2032 39 39 4693 5004 5330 5924;5925 5330 5924 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16589 5330 5924 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16589 5330 5924 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16589 Q9NUL3 488 Q9NUL3 Q9NUL3 Double-stranded RNA-binding protein Staufen homolog 2 STAU2 sp|Q9NUL3|STAU2_HUMAN Double-stranded RNA-binding protein Staufen homolog 2 OS=Homo sapiens GN=STAU2 PE=1 SV=1 0.905058 10.482 0.00862857 90.718 70.337 90.718 2 T TSSTAEAIGLKGSSPTPPCSPVQPSKQLEYL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPXXXXX GS(0.014)S(0.081)PT(0.905)PPCS(1)PVQPSK GS(-18.13)S(-10.48)PT(10.48)PPCS(34.41)PVQPS(-34.41)K 5 3 -0.4237 0 19238 0 0 17882 0 0 24126 0 0 19381 0 0 21121 0 0 21324 0 0 20165 0 0 19868 0 0 19882 0 0 6093.1 0 0 18222 0 0 16901 0 0 23974 0 0 19840 0 0 21597 0 0 21281 0 0 20564 0 0 20170 0 0 19630 0 0 6197.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 28873000 0 28873000 0 NaN 4784 2038 488 488 1639 1726;1727 1865 2078 1865 2078 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10193 1865 2078 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10193 1865 2078 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10193 Q9NV70 468 Q9NV70 Q9NV70 Exocyst complex component 1 EXOC1 sp|Q9NV70|EXOC1_HUMAN Exocyst complex component 1 OS=Homo sapiens GN=EXOC1 PE=1 SV=4 0.476504 1.3299 0.0130834 74.962 46.219 74.962 T VKQETESLHGSSGKLTGSTSSLNKLSVQSSG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPXXXXXXX LT(0.477)GS(0.351)T(0.17)S(0.002)SLNK LT(1.33)GS(-1.33)T(-4.47)S(-23.12)S(-32.92)LNK 2 3 0.26801 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4785 2044 468 468 2623 2770 2971 3308 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13511 2971 3308 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13511 2971 3308 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13511 Q9NVU0 64 Q9NVU0 Q9NVU0 DNA-directed RNA polymerase III subunit RPC5 POLR3E sp|Q9NVU0|RPC5_HUMAN DNA-directed RNA polymerase III subunit RPC5 OS=Homo sapiens GN=POLR3E PE=1 SV=1 0.997157 25.3705 0.0438296 41.136 10.83 41.136 2 T IKPKQQKVELEMAIDTLNPNYCRSKGEQIAL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPXXXXXX VELEMAIDT(0.997)LNPNY(0.982)CRS(0.021)K VELEMAIDT(25.37)LNPNY(17.34)CRS(-17.34)K 9 3 0.57275 0 6050.6 0 0 12890 0 0 6281.7 0 0 13697 0 0 18642 0 0 6457.9 0 0 20799 0 0 15229 0 0 15917 0 0 5193.4 0 0 5726.3 0 0 12182 0 0 6467.4 0 0 13898 0 0 18214 0 0 6916 0 0 20934 0 0 15093 0 0 15912 0 0 5242.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 15694000 0 15694000 0 NaN 4786 2049 64 64 5093 5429 5781 6425 5781 6425 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8836 5781 6425 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8836 5781 6425 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8836 Q9NXH9 646 Q9NXH9 Q9NXH9 tRNA (guanine(26)-N(2))-dimethyltransferase TRMT1 sp|Q9NXH9|TRM1_HUMAN tRNA (guanine(26)-N(2))-dimethyltransferase OS=Homo sapiens GN=TRMT1 PE=1 SV=1 0.999875 39.7075 5.97021E-08 169.18 144.13 169.18 1 T VSADAAPDCPETSNQTPPGPGAAAGPGID__ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPPPPPPPPPPXX VSADAAPDCPETSNQT(1)PPGPGAAAGPGID VS(-99.63)ADAAPDCPET(-47.36)S(-39.71)NQT(39.71)PPGPGAAAGPGID 16 3 0.52781 2555.1 0 0 2838.8 0 0 3383.6 0 0 2961.1 0 0 3336.3 0 0 2850.6 0 0 3087.2 0 0 3119.4 0 0 2852.9 0 0 23106 0 0 2420.9 0 0 2682.4 0 0 3358.5 0 0 3031.1 0 0 3384.7 0 0 2909.1 0 0 3148 0 0 3814.8 0 0 2824.9 0 0 21829 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11057000 11057000 0 0 NaN 4787 2066 646 646 5238 5583 5951 6615 5951 6615 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15026 5951 6615 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15026 5951 6615 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15026 Q9NYF8 840 Q9NYF8 Q9NYF8 Bcl-2-associated transcription factor 1 BCLAF1 sp|Q9NYF8|BCLF1_HUMAN Bcl-2-associated transcription factor 1 OS=Homo sapiens GN=BCLAF1 PE=1 SV=2 0.992715 21.344 0.0178152 65.956 49.732 65.956 1 T TFQKRPKEEEWDPEYTPKSKKYFLHDDRDDG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX EEEWDPEY(0.007)T(0.993)PK EEEWDPEY(-21.34)T(21.34)PK 9 3 -0.40896 9066.3 0 0 8394.2 0 0 11931 0 0 8819.9 0 0 6251 0 0 10481 0 0 6136.1 0 0 8961.9 0 0 10087 0 0 6285.7 0 0 8589.8 0 0 7932.1 0 0 11779 0 0 9056.7 0 0 6681 0 0 10425 0 0 6359.7 0 0 9237.7 0 0 9785.1 0 0 6126.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9020300 9020300 0 0 NaN 4788 2072 840 840 921 975 1057 1167 1057 1167 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16078 1057 1167 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16078 1057 1167 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16078 Q9NYF8 726 Q9NYF8 Q9NYF8 Bcl-2-associated transcription factor 1 BCLAF1 sp|Q9NYF8|BCLF1_HUMAN Bcl-2-associated transcription factor 1 OS=Homo sapiens GN=BCLAF1 PE=1 SV=2 1 58.9778 0.0260115 58.978 23.018 58.978 1 T SKGSRESSGSRKQEKTPKDYKEYKSYKDDSK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX KQEKT(1)PK KQEKT(58.98)PK 5 4 0.21963 16309 0 0 20510 0 0 17474 0 0 20211 0 0 9196.7 0 0 18966 0 0 9758.6 0 0 15842 0 0 24393 0 0 4526.3 0 0 15437 0 0 19374 0 0 17428 0 0 20751 0 0 9843.3 0 0 19035 0 0 10307 0 0 16148 0 0 23448 0 0 4628.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13337000 13337000 0 0 NaN 4789 2072 726 726 2176 2299 2475 2755 2475 2755 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6981 2475 2755 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6981 2475 2755 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6981 Q9NYV4 692 Q9NYV4 Q9NYV4 Cyclin-dependent kinase 12 CDK12 sp|Q9NYV4|CDK12_HUMAN Cyclin-dependent kinase 12 OS=Homo sapiens GN=CDK12 PE=1 SV=2 1 90.1563 0.00126884 99.589 72.882 99.589 1 T GGDLSPPDSPEPKAITPPQQPYKKRPKICCP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX AIT(1)PPQQPYK AIT(90.16)PPQQPY(-90.16)K 3 3 0.22231 12703 0 0 16959 0 0 11576 0 0 14192 0 0 12717 0 0 13152 0 0 10616 0 0 11773 0 0 16352 0 0 3300 0 0 12016 0 0 16005 0 0 11731 0 0 14724 0 0 12814 0 0 13218 0 0 11064 0 0 11962 0 0 15891 0 0 3379.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20567000 20567000 0 0 NaN 4790 2077 692 692 261 282 303 337 303 337 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13960 303 337 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13960 303 337 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13960 Q9NYV4 1244 Q9NYV4 Q9NYV4 Cyclin-dependent kinase 12 CDK12 sp|Q9NYV4|CDK12_HUMAN Cyclin-dependent kinase 12 OS=Homo sapiens GN=CDK12 PE=1 SV=2 0.990938 20.388 1.54714E-08 166.28 126.43 166.28 1 T ENNSDKNSGPQGPRRTPTMPQEEAAACPPHI X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP RT(0.991)PT(0.009)MPQEEAAACPPHILPPEK RT(20.39)PT(-20.39)MPQEEAAACPPHILPPEK 2 4 0.97687 6901 0 0 6883 0 0 7239.3 0 0 6389.4 0 0 5665.8 0 0 7022.5 0 0 5805.3 0 0 6504.4 0 0 7498.2 0 0 7692.2 0 0 6531.4 0 0 6499.3 0 0 7251.1 0 0 6600.7 0 0 5846.2 0 0 7018.8 0 0 5949 0 0 6776.2 0 0 7326.7 0 0 7393.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 17073000 17073000 0 0 NaN 4791 2077 1244 1244 3527 3744 3990 4430 3990 4430 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15426 3990 4430 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15426 3990 4430 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15426 Q9NZQ3 181 Q9NZQ3 Q9NZQ3 NCK-interacting protein with SH3 domain NCKIPSD sp|Q9NZQ3|SPN90_HUMAN NCK-interacting protein with SH3 domain OS=Homo sapiens GN=NCKIPSD PE=1 SV=1 0.952264 12.9991 0.0128929 75.89 50.153 75.89 1 T PSSQIPPQPRRAAPTTPPPPVKRRDREALMA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPXXXXXXXXX AAPT(0.048)T(0.952)PPPPVK AAPT(-13)T(13)PPPPVK 5 3 1.0446 11637 0 0 9811.9 0 0 10677 0 0 11290 0 0 11525 0 0 12076 0 0 11948 0 0 10963 0 0 11679 0 0 2103.4 0 0 11008 0 0 9277.4 0 0 10817 0 0 11515 0 0 11651 0 0 12059 0 0 12134 0 0 11103 0 0 11535 0 0 2234.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 14994000 14994000 0 0 NaN 4792 2087 181 181 54 58 63 75 63 75 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11569 63 75 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11569 63 75 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11569 Q9P275 581 Q9P275 Q9P275 Ubiquitin carboxyl-terminal hydrolase 36 USP36 sp|Q9P275|UBP36_HUMAN Ubiquitin carboxyl-terminal hydrolase 36 OS=Homo sapiens GN=USP36 PE=1 SV=3 0.925172 10.9671 8.49189E-06 147.58 112.04 147.58 1 T SQRQGSWDSRDVVLSTSPKLLATATANGHGL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX DVVLS(0.001)T(0.925)S(0.074)PK DVVLS(-30.74)T(10.97)S(-10.97)PK 6 2 -0.3883 28013 0 0 22580 0 0 28756 0 0 24517 0 0 15228 0 0 26169 0 0 15593 0 0 22943 0 0 23186 0 0 9262.3 0 0 26510 0 0 21342 0 0 28748 0 0 25082 0 0 16265 0 0 26134 0 0 16063 0 0 23418 0 0 22556 0 0 9252.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 26460000 26460000 0 0 NaN 4793 2103 581 581 846 895 951 1047 951 1047 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14799 951 1047 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14799 951 1047 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14799 Q9P2D1 2532 Q9P2D1 Q9P2D1 Chromodomain-helicase-DNA-binding protein 7 CHD7 sp|Q9P2D1|CHD7_HUMAN Chromodomain-helicase-DNA-binding protein 7 OS=Homo sapiens GN=CHD7 PE=1 SV=3 0.83732 7.19981 3.5098E-10 187.04 154.09 187.04 1 T KNVEGLDLLFMSHKRTSLSAEDAEVTKAFEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPXXXX RT(0.837)S(0.16)LS(0.003)AEDAEVTK RT(7.2)S(-7.2)LS(-24.28)AEDAEVT(-158.41)K 2 3 0.089725 16254 0 0 10015 0 0 18028 0 0 10562 0 0 19897 0 0 18397 0 0 18344 0 0 15807 0 0 10807 0 0 7347.8 0 0 15387 0 0 9463.6 0 0 18071 0 0 10937 0 0 20052 0 0 18072 0 0 18541 0 0 16178 0 0 10983 0 0 7284.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25867000 25867000 0 0 NaN 4794 2107 2532 2532 3535 3752 3998 4438 3998 4438 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11461 3998 4438 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11461 3998 4438 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11461 Q9P2E9 225 Q9P2E9 Q9P2E9 Ribosome-binding protein 1 RRBP1 sp|Q9P2E9|RRBP1_HUMAN Ribosome-binding protein 1 OS=Homo sapiens GN=RRBP1 PE=1 SV=4 1 78.5055 0.0248946 78.505 49.873 78.505 1 T KKAEGAPNQGRKAEGTPNQGKKTEGTPNQGK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX KAEGT(1)PNQGK KAEGT(78.51)PNQGK 5 3 -1.0104 13049 0 0 12192 0 0 13502 0 0 12205 0 0 14285 0 0 14041 0 0 14274 0 0 12735 0 0 13548 0 0 2396.6 0 0 12349 0 0 11518 0 0 13580 0 0 12560 0 0 14450 0 0 13981 0 0 14511 0 0 12897 0 0 13399 0 0 2551.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 25752000 25752000 0 0 NaN 4795 2109 225 225 1999 2114 2278 2544 2278 2544 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6856 2278 2544 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6856 2278 2544 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6856 Q9P2J5 721 Q9P2J5 Q9P2J5 Leucine--tRNA ligase, cytoplasmic LARS sp|Q9P2J5|SYLC_HUMAN Leucine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=LARS PE=1 SV=2 0.497647 0 0.00547765 86.497 33.969 86.497 T ANGHLLLNSEKMSKSTGNFLTLTQAIDKFSA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.498)T(0.498)GNFLT(0.005)LTQAIDK S(0)T(0)GNFLT(-20.25)LT(-47.99)QAIDK 2 3 0.70458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4796 2110 721 721 4507 4800 5112 5677 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23416 5112 5677 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23416 5112 5677 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23416 Q9P2N5 447 Q9P2N5 Q9P2N5 RNA-binding protein 27 RBM27 sp|Q9P2N5|RBM27_HUMAN RNA-binding protein 27 OS=Homo sapiens GN=RBM27 PE=1 SV=2 1 119.631 0.000182575 119.63 96.752 119.63 1 T SREHGAAASERLQLGTPPPLLAARLVPPRNL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPXXXXXXX LQLGT(1)PPPLLAAR LQLGT(119.63)PPPLLAAR 5 2 0.63161 4834.8 0 0 7444.9 0 0 4059.7 0 0 7698.2 0 0 4820.8 0 0 4316.7 0 0 4851.8 0 0 6719.6 0 0 8201.3 0 0 19403 0 0 4572 0 0 7034.3 0 0 4141.8 0 0 7834.4 0 0 4850.9 0 0 4544.5 0 0 5028.9 0 0 7231.8 0 0 7950.2 0 0 18426 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7352500 7352500 0 0 NaN 4797 2112 447 447 2523 2665 2861 3191 2861 3191 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22392 2861 3191 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22392 2861 3191 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22392 Q9P2R6 599 Q9P2R6 Q9P2R6 Arginine-glutamic acid dipeptide repeats protein RERE sp|Q9P2R6|RERE_HUMAN Arginine-glutamic acid dipeptide repeats protein OS=Homo sapiens GN=RERE PE=1 SV=2 0.94808 12.6151 7.4329E-06 151.13 85.5 151.13 1 T LRSGRKKQPASPDGRTSPINEDIRSSGRNSP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX T(0.948)S(0.052)PINEDIR T(12.62)S(-12.62)PINEDIR 1 2 1.0767 24663 0 0 30533 0 0 25470 0 0 26139 0 0 30277 0 0 24915 0 0 31483 0 0 28919 0 0 30508 0 0 11277 0 0 23341 0 0 28818 0 0 25662 0 0 27087 0 0 30457 0 0 25100 0 0 31963 0 0 29192 0 0 30144 0 0 11288 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 30245000 30245000 0 0 NaN 4798 2114 599 599 4936 5261 5604 6228 5604 6228 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11228 5604 6228 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11228 5604 6228 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11228 Q9P2R6 658 Q9P2R6 Q9P2R6 Arginine-glutamic acid dipeptide repeats protein RERE sp|Q9P2R6|RERE_HUMAN Arginine-glutamic acid dipeptide repeats protein OS=Homo sapiens GN=RERE PE=1 SV=2 0.621075 2.14591 0.000378208 113.67 76.824 113.67 1 T PLKSNKRQREKVASDTEEADRTSSKKTKTQE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX VAS(0.379)DT(0.621)EEADR VAS(-2.15)DT(2.15)EEADR 5 2 -0.87775 9913.6 0 0 11015 0 0 10608 0 0 10514 0 0 12535 0 0 8787.5 0 0 11346 0 0 9997.9 0 0 11603 0 0 4230 0 0 9383.4 0 0 10403 0 0 10663 0 0 10798 0 0 12590 0 0 8908.3 0 0 11614 0 0 10109 0 0 11438 0 0 4214.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5502600 5502600 0 0 NaN 4799 2114 658 658 5052 5386 5738 6377 5738 6377 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7163 5738 6377 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7163 5738 6377 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7163 Q9UBW5 279 Q9UBW5 Q9UBW5 Bridging integrator 2 BIN2 sp|Q9UBW5|BIN2_HUMAN Bridging integrator 2 OS=Homo sapiens GN=BIN2 PE=1 SV=3 0.892955 9.47181 3.04829E-08 171.58 149.71 171.58 1 T PPVRTATVSSPLTSPTSPSTLSLKSESESVS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPPPXXXXXXX TATVSSPLTS(0.003)PT(0.893)S(0.101)PS(0.003)TLSLK T(-98.13)AT(-92.41)VS(-78.78)S(-84.82)PLT(-50.34)S(-25.41)PT(9.47)S(-9.47)PS(-24.59)T(-32.54)LS(-45.81)LK 12 3 0.048147 13223 0 0 5040.2 0 0 15717 0 0 4483.3 0 0 26951 0 0 13233 0 0 26021 0 0 17687 0 0 4938.3 0 0 19375 0 0 12522 0 0 4758.2 0 0 15818 0 0 4777.9 0 0 26654 0 0 12966 0 0 25955 0 0 18152 0 0 5766.8 0 0 18654 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 52889000 52889000 0 0 NaN 4800 2131 279 279 4643 4954 5278 5864 5278 5864 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19541 5278 5864 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19541 5278 5864 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19541 Q9UBW5 478 Q9UBW5 Q9UBW5 Bridging integrator 2 BIN2 sp|Q9UBW5|BIN2_HUMAN Bridging integrator 2 OS=Homo sapiens GN=BIN2 PE=1 SV=3 1 87.6598 4.03088E-08 161 145.75 161 1 T LEVSPNPEPPEKPVRTPEAKENENIHNQNPE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX TSLEVSPNPEPPEKPVRT(1)PEAK T(-115.73)S(-115.73)LEVS(-87.66)PNPEPPEKPVRT(87.66)PEAK 18 4 0.3719 17852 0 0 7237.6 0 0 17184 0 0 8078.5 0 0 12553 0 0 17752 0 0 13166 0 0 13322 0 0 7038.7 0 0 12378 0 0 16890 0 0 6841.9 0 0 17287 0 0 8398.9 0 0 13015 0 0 17329 0 0 13204 0 0 13908 0 0 7204.9 0 0 11964 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18597000 18597000 0 0 NaN 4801 2131 478 478 4921 5246 5589 6211 5589 6211 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13764 5589 6211 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13764 5589 6211 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13764 Q9UGP4 386 Q9UGP4 Q9UGP4 LIM domain-containing protein 1 LIMD1 sp|Q9UGP4|LIMD1_HUMAN LIM domain-containing protein 1 OS=Homo sapiens GN=LIMD1 PE=1 SV=1 0.364945 0 0.0210063 65.854 41.567 65.854 T KPGCTDLGTGPKLSPTSLVHPVMSTLPELSC X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPPPPP LS(0.27)PT(0.365)S(0.365)LVHPVMSTLPELSCK LS(-1.31)PT(0)S(0)LVHPVMS(-54.49)T(-54.49)LPELS(-60.95)CK 4 3 2.6851 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4802 2139 386 386 2579 2723 2921 3255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23410 2921 3255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23410 2921 3255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23410 Q9UGU0 1334 Q9UGU0 Q9UGU0 Transcription factor 20 TCF20 sp|Q9UGU0|TCF20_HUMAN Transcription factor 20 OS=Homo sapiens GN=TCF20 PE=1 SV=3 0.499945 0 0.000208887 106.14 93.003 106.14 1 T DLPSPDSRNCPAVTLTSPAKTKILPPRKGRG X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX NCPAVTLT(0.5)S(0.5)PAK NCPAVT(-36.55)LT(0)S(0)PAK 8 3 -0.062465 12215 0 0 12356 0 0 15036 0 0 15558 0 0 10477 0 0 13742 0 0 11150 0 0 13049 0 0 15084 0 0 4333.8 0 0 11569 0 0 11691 0 0 14923 0 0 15750 0 0 10915 0 0 13855 0 0 11425 0 0 13247 0 0 14717 0 0 4382.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23728000 23728000 0 0 NaN 4803 2140 1334 1334 2783 2952 3162 3513 3162 3513 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13709 3162 3513 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13709 3162 3513 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13709 Q9UGU0 1671 Q9UGU0 Q9UGU0 Transcription factor 20 TCF20 sp|Q9UGU0|TCF20_HUMAN Transcription factor 20 OS=Homo sapiens GN=TCF20 PE=1 SV=3 0.988711 20.2441 6.27907E-07 147.26 113.18 147.26 1 T EQTKLVRGRKGQRSLTPPPSSTESKALPASS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPXXXXXX S(0.009)LT(0.989)PPPS(0.002)STESK S(-20.24)LT(20.24)PPPS(-27.88)S(-35.47)T(-43.02)ES(-74.97)K 3 2 0.33063 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4804 2140 1671 1671 4013 4279 4567 5075 4567 5075 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11260 4567 5075 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11260 4567 5075 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11260 Q9UHY1 431 Q9UHY1 Q9UHY1 Nuclear receptor-binding protein NRBP1 sp|Q9UHY1|NRBP_HUMAN Nuclear receptor-binding protein OS=Homo sapiens GN=NRBP1 PE=1 SV=1 0.663471 2.94799 3.55449E-07 160.23 106.66 160.23 1 T QQEEVTSPVVPPSVKTPTPEPAEVETRKVVL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX T(0.663)PT(0.337)PEPAEVETR T(2.95)PT(-2.95)PEPAEVET(-92.98)R 1 2 -0.46389 12009 0 0 15163 0 0 11319 0 0 16043 0 0 13641 0 0 12327 0 0 15077 0 0 14355 0 0 17454 0 0 8398.7 0 0 11361 0 0 14329 0 0 11468 0 0 16359 0 0 13728 0 0 12563 0 0 15344 0 0 14574 0 0 17121 0 0 8240.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 29632000 29632000 0 0 NaN 4805 2151 431 431 4862 5187 5526 6144 5526 6144 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9700 5526 6144 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9700 5526 6144 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9700 Q9UI08 343 Q9UI08 Q9UI08 Ena/VASP-like protein EVL sp|Q9UI08|EVL_HUMAN Ena/VASP-like protein OS=Homo sapiens GN=EVL PE=1 SV=2 0.982809 17.5711 0.0113689 88.319 68.925 88.319 2 T RSNSVEKPVSSILSRTPSVAKSPEAKSPLQS X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPXXXXX T(0.983)PS(0.017)VAKS(1)PEAK T(17.57)PS(-17.57)VAKS(40.11)PEAK 1 3 0.83106 0 66403 0 0 12752 0 0 61266 0 0 13160 0 0 22449 0 0 64832 0 0 26929 0 0 38551 0 0 13339 0 0 49473 0 0 62815 0 0 12048 0 0 61520 0 0 14318 0 0 25123 0 0 62442 0 0 26824 0 0 41179 0 0 13738 0 0 47477 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 54575000 0 54575000 0 NaN 4806 2152 343 343 4861 5186 5525 6143 5525 6143 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10739 5525 6143 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10739 5525 6143 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10739 Q9UIQ6 609 Q9UIQ6 Q9UIQ6 Leucyl-cystinyl aminopeptidase;Leucyl-cystinyl aminopeptidase, pregnancy serum form LNPEP sp|Q9UIQ6|LCAP_HUMAN Leucyl-cystinyl aminopeptidase OS=Homo sapiens GN=LNPEP PE=1 SV=3 1 42.5556 0.0524172 42.556 7.6682 42.556 2 T NEVTNQTLDVKRMMKTWTLQKGFPLVTVQKK X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);Oxidation (M);X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX MMKT(1)WT(1)LQK MMKT(42.56)WT(42.56)LQK 4 3 1.8317 0 12083 0 0 10478 0 0 11421 0 0 10333 0 0 16750 0 0 11889 0 0 16220 0 0 13442 0 0 10195 0 0 7030.2 0 0 11431 0 0 9897.5 0 0 11602 0 0 10643 0 0 16670 0 0 11880 0 0 16371 0 0 13635 0 0 10315 0 0 6930.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 17188000 0 17188000 0 NaN 4807 2159 609 609 2714 2880 3089 3436 3089 3436 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18588 3089 3436 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18588 3089 3436 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18588 Q9UIQ6 611 Q9UIQ6 Q9UIQ6 Leucyl-cystinyl aminopeptidase;Leucyl-cystinyl aminopeptidase, pregnancy serum form LNPEP sp|Q9UIQ6|LCAP_HUMAN Leucyl-cystinyl aminopeptidase OS=Homo sapiens GN=LNPEP PE=1 SV=3 1 42.5556 0.0524172 42.556 7.6682 42.556 2 T VTNQTLDVKRMMKTWTLQKGFPLVTVQKKGK X;X;X;X;X;X;X;X;X;X;Oxidation (M);Oxidation (M);X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX MMKT(1)WT(1)LQK MMKT(42.56)WT(42.56)LQK 6 3 1.8317 0 12083 0 0 10478 0 0 11421 0 0 10333 0 0 16750 0 0 11889 0 0 16220 0 0 13442 0 0 10195 0 0 7030.2 0 0 11431 0 0 9897.5 0 0 11602 0 0 10643 0 0 16670 0 0 11880 0 0 16371 0 0 13635 0 0 10315 0 0 6930.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 17188000 0 17188000 0 NaN 4808 2159 611 611 2714 2880 3089 3436 3089 3436 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18588 3089 3436 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18588 3089 3436 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18588 Q9UIQ6 870 Q9UIQ6 Q9UIQ6 Leucyl-cystinyl aminopeptidase;Leucyl-cystinyl aminopeptidase, pregnancy serum form LNPEP sp|Q9UIQ6|LCAP_HUMAN Leucyl-cystinyl aminopeptidase OS=Homo sapiens GN=LNPEP PE=1 SV=3 0.568259 1.19323 0.0389016 61.641 40.688 61.641 1 T LPTDVMTTVFKVGAKTDKGWSFLLGKYISIG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPXXXXX T(0.568)DKGWS(0.432)FLLGK T(1.19)DKGWS(-1.19)FLLGK 1 3 0.75681 7984.6 0 0 6518.9 0 0 7304.3 0 0 4511.9 0 0 7536.9 0 0 7440 0 0 7492.5 0 0 7221.6 0 0 5946.4 0 0 8740.2 0 0 7552.9 0 0 6146.7 0 0 7396.9 0 0 4802.3 0 0 7632.6 0 0 7340.5 0 0 7586.5 0 0 7515.6 0 0 5932.9 0 0 8397.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13941000 13941000 0 0 NaN 4809 2159 870 870 4660 4971 5295 5883 5295 5883 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20181 5295 5883 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20181 5295 5883 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20181 Q9UJU6 291 Q9UJU6 Q9UJU6 Drebrin-like protein DBNL sp|Q9UJU6|DBNL_HUMAN Drebrin-like protein OS=Homo sapiens GN=DBNL PE=1 SV=1 0.99976 36.1922 0.00238704 97.093 79.666 97.093 1 T PQPGKLRSPFLQKQLTQPETHFGREPAAAIS X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX QLT(1)QPETHFGR QLT(36.19)QPET(-36.19)HFGR 3 3 -0.24369 12449 0 0 7607.4 0 0 13693 0 0 8635.5 0 0 7538.7 0 0 13130 0 0 7083.2 0 0 9420.4 0 0 7008.2 0 0 2863.1 0 0 11785 0 0 7192.3 0 0 13640 0 0 8876.1 0 0 8007.1 0 0 12919 0 0 7229.9 0 0 9679.4 0 0 6918.2 0 0 2914 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 46916000 46916000 0 0 NaN 4810 2161 291 291 3082 3268 3496 3872 3496 3872 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11093 3496 3872 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11093 3496 3872 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11093 Q9UJX2 596 Q9UJX2 Q9UJX2 Cell division cycle protein 23 homolog CDC23 sp|Q9UJX2|CDC23_HUMAN Cell division cycle protein 23 homolog OS=Homo sapiens GN=CDC23 PE=1 SV=3 0.999995 52.6508 2.25487E-07 171.26 159.35 171.26 1 T NTPTRRVSPLNLSSVTP______________ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPXXXXXXXXXXXXXX VSPLNLSSVT(1)P VS(-126.41)PLNLS(-76.86)S(-52.65)VT(52.65)P 10 2 -0.60005 6878.3 0 0 4835.6 0 0 6388.9 0 0 5592.5 0 0 4889.5 0 0 7097 0 0 6104.2 0 0 6740.3 0 0 6476.3 0 0 15134 0 0 6506.8 0 0 4572.3 0 0 6445.4 0 0 5720.2 0 0 5067.9 0 0 7070.6 0 0 6165.4 0 0 7230.9 0 0 6374.4 0 0 14406 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20799000 20799000 0 0 NaN 4811 2162 596 596 3558;5264 3777;5610 5980 6644 5980 6644 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21124 5980 6644 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21124 5980 6644 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21124 Q9ULU4 481 Q9ULU4 Q9ULU4 Protein kinase C-binding protein 1 ZMYND8 sp|Q9ULU4|PKCB1_HUMAN Protein kinase C-binding protein 1 OS=Homo sapiens GN=ZMYND8 PE=1 SV=2 0.513775 0.63989 3.92279E-05 123.73 107.84 123.73 2 T MDFLDKSTASPASTKTGQAGSLSGSPKPFSP X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPPPPP T(0.514)GQAGS(0.468)LS(0.304)GS(0.698)PKPFS(0.016)PQLSAPITTK T(0.64)GQAGS(-0.64)LS(-4.08)GS(4.08)PKPFS(-16.37)PQLS(-57.99)APIT(-98.3)T(-101.74)K 1 4 0.94147 0 7726.9 0 0 12013 0 0 8689.3 0 0 13151 0 0 12902 0 0 10336 0 0 13215 0 0 11463 0 0 12996 0 0 9531.9 0 0 7315.2 0 0 11355 0 0 8746.4 0 0 13388 0 0 12848 0 0 10518 0 0 13431 0 0 11742 0 0 12833 0 0 9240.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 23551000 0 23551000 0 NaN 4812 2190 481 481 4724 5035;5036 5365 5966 5365 5966 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19497 5365 5966 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19497 5365 5966 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19497 Q9UN36 330 Q9UN36 Q9UN36 Protein NDRG2 NDRG2 sp|Q9UN36|NDRG2_HUMAN Protein NDRG2 OS=Homo sapiens GN=NDRG2 PE=1 SV=2 0.592671 1.62805 0.000327119 103.84 92.32 103.84 2 T GYMASSCMTRLSRSRTASLTSAASVDGNRSR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPXX S(0.407)RT(0.593)AS(0.999)LT(0.001)SAASVDGNR S(-1.63)RT(1.63)AS(31.54)LT(-31.54)S(-49.84)AAS(-73.99)VDGNR 3 3 -0.43237 0 11055 0 0 9768.2 0 0 12451 0 0 10921 0 0 10231 0 0 15853 0 0 9599.8 0 0 11564 0 0 12059 0 0 11660 0 0 10467 0 0 9234.3 0 0 12429 0 0 11222 0 0 10507 0 0 15638 0 0 9869.4 0 0 12117 0 0 11795 0 0 11247 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 12365000 0 12365000 0 NaN 4813 2201 330 330 4311;4634 4596;4943 4897 5440 4897 5440 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9624 4897 5440 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9624 4897 5440 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9624 Q9UN86 226 Q9UN86 Q9UN86 Ras GTPase-activating protein-binding protein 2 G3BP2 sp|Q9UN86|G3BP2_HUMAN Ras GTPase-activating protein-binding protein 2 OS=Homo sapiens GN=G3BP2 PE=1 SV=2 0.370397 0 1.45492E-07 154.72 135.04 154.72 T PQVEEKNLEELEEKSTTPPPAEPVSLPQEPP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.37)T(0.37)T(0.259)PPPAEPVSLPQEPPK S(0)T(0)T(-1.55)PPPAEPVS(-90.51)LPQEPPK 2 3 -0.47861 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4814 2202 226 226 4539 4841 5158 5727 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16048 5158 5727 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16048 5158 5727 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16048 Q9UNN5 580 Q9UNN5 Q9UNN5 FAS-associated factor 1 FAF1 sp|Q9UNN5|FAF1_HUMAN FAS-associated factor 1 OS=Homo sapiens GN=FAF1 PE=1 SV=2 0.587448 1.53491 0.0103962 86.014 36.596 86.014 1 T PKEENAEPVSKLRIRTPSGEFLERRFLASNK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX T(0.587)PS(0.413)GEFLER T(1.53)PS(-1.53)GEFLER 1 2 -0.61241 13176 0 0 33053 0 0 13800 0 0 29232 0 0 22474 0 0 13055 0 0 21167 0 0 23426 0 0 33070 0 0 6559.5 0 0 12470 0 0 31202 0 0 13963 0 0 29988 0 0 22287 0 0 13950 0 0 21935 0 0 23294 0 0 32125 0 0 6718.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 72319000 72319000 0 0 NaN 4815 2207 580 580 1931;4845 2039;5170 5509 6127 5509 6127 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13979 5509 6127 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13979 5509 6127 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13979 Q9UPY8 161 Q9UPY8 Q9UPY8 Microtubule-associated protein RP/EB family member 3 MAPRE3 sp|Q9UPY8|MARE3_HUMAN Microtubule-associated protein RP/EB family member 3 OS=Homo sapiens GN=MAPRE3 PE=1 SV=1 0.941608 12.0773 0.00107081 125.82 24.387 125.82 1 T FNKSKKLIGTAVPQRTSPTGPKNMQTSGRLS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX T(0.942)S(0.058)PTGPK T(12.08)S(-12.08)PT(-45.14)GPK 1 2 -0.46709 16017 0 0 56640 0 0 18830 0 0 49455 0 0 14278 0 0 16468 0 0 11227 0 0 28328 0 0 58052 0 0 4448.2 0 0 15167 0 0 53465 0 0 18738 0 0 50687 0 0 14759 0 0 18136 0 0 12857 0 0 28089 0 0 55294 0 0 4844.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 44022000 44022000 0 0 NaN 4816 2224 161 161 4945 5273 5616 6241 5616 6241 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7495 5616 6241 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7495 5616 6241 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7495 Q9UQ35 1413 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.995618 23.5666 1.01344E-17 241.4 222.63 241.4 1;2 T SNQSISSPVLDAVPRTPSRERSSSASSPEMK X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Oxidation (M);X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX AGMSSNQSIS(0.002)S(0.998)PVLDAVPRT(0.996)PS(0.004)R AGMS(-82.79)S(-75.56)NQS(-53.64)IS(-26.95)S(26.95)PVLDAVPRT(23.57)PS(-23.57)R 20 3 -0.2221 33787 17610 0 38187 18384 0 38890 21044 0 39591 18292 0 37569 13883 0 36913 22328 0 37689 13804 0 40131 17639 0 44217 19635 0 33431 37579 0 31990 16676 0 36082 17367 0 38851 20905 0 40522 18852 0 38211 14516 0 37222 22213 0 38538 14215 0 41137 19007 0 43352 19126 0 32408 35794 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 249930000 69882000 180050000 0 NaN 4817 2226 1413 1413 215 226;227;228;229 244;245;246;247 272;273;274;275 247 275 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16401 247 275 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16401 247 275 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16401 Q9UQ35 1492 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 1 117.975 0.000590715 117.98 67.768 117.98 1 T RSECDSSPEPKALPQTPRPRSRSPSSPELNN X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX ALPQT(1)PRPR ALPQT(117.98)PRPR 5 3 -0.83077 59041 0 0 52144 0 0 59277 0 0 51894 0 0 25823 0 0 52140 0 0 25182 0 0 42408 0 0 54017 0 0 1225.7 0 0 55869 0 0 49257 0 0 59264 0 0 53302 0 0 28198 0 0 52132 0 0 26454 0 0 42952 0 0 52076 0 0 2135.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 479850000 479850000 0 0 NaN 4818 2226 1492 1492 303 324 345 385 345 385 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8118 345 385 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8118 345 385 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8118 Q9UQ35 1003 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 1 95.0321 4.24018E-16 214.92 183.32 214.92 1;2 T SHSGSISPYPKVKAQTPPGPSLSGSKSPCPQ X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP AQT(1)PPGPSLSGS(0.026)KS(0.974)PCPQEK AQT(95.03)PPGPS(-82.98)LS(-44.49)GS(-15.72)KS(15.72)PCPQEK 3 4 -0.54398 61847 32391 0 44357 39103 0 68928 33597 0 45512 37363 0 71614 17022 0 69209 35214 0 78029 18319 0 68181 29845 0 48301 40620 0 13746 31482 0 58550 30654 0 41909 36929 0 69045 33560 0 47040 38434 0 72578 18292 0 68327 35385 0 78304 19195 0 68845 31093 0 48920 39134 0 14521 30335 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 2 2 0 448700000 249320000 199380000 0 NaN 4819 2226 1003 1003 410;411;5141;5142 438;439;440;5478;5479 473;475;5835;5836 527;529;6487;6488 475 529 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12508 475 529 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12508 475 529 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12508 Q9UQ35 2409 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.997954 28.6527 0.0295536 64.331 44.239 64.331 2 T SGRTSPPLLDRARSRTPPSAPSQSRMTSERA X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPXXXXXX ARS(1)RT(0.998)PPS(0.002)APSQSR ARS(35.58)RT(28.65)PPS(-28.65)APS(-35.21)QS(-34.56)R 5 3 -0.51963 0 3206.3 0 0 3363 0 0 2410.3 0 0 3746.4 0 0 2808.9 0 0 3724.2 0 0 2459.4 0 0 3201 0 0 3023.9 0 0 1929.4 0 0 3031 0 0 3179.1 0 0 2477 0 0 3822.9 0 0 2822.6 0 0 3731.1 0 0 2535.7 0 0 3289.2 0 0 2959.7 0 0 1890.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 37871000 0 37871000 0 NaN 4820 2226 2409 2409 428;4316 457;4601 492 548 492 548 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5219 492 548 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5219 492 548 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5219 Q9UQ35 1434 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.985693 18.3819 0.0169794 80.522 45.318 80.522 1 T SSSASSPEMKDGLPRTPSRRSRSGSSPGLRD X;X;Phospho (STY);X;X;X;X;X;Oxidation (M);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX DGLPRT(0.986)PS(0.014)R DGLPRT(18.38)PS(-18.38)R 6 3 -0.21868 15925 0 0 17670 0 0 15734 0 0 18169 0 0 11420 0 0 16691 0 0 11924 0 0 15267 0 0 19284 0 0 1386.9 0 0 15068 0 0 16695 0 0 15803 0 0 18602 0 0 11858 0 0 16781 0 0 12315 0 0 15411 0 0 18715 0 0 1659.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 107390000 107390000 0 0 NaN 4821 2226 1434 1434 681 725 773 855 773 855 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7279 773 855 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7279 773 855 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7279 Q9UQ35 1472 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.999818 37.4029 0.00177941 111.5 76.964 111.5 1 T HSLSGSSPGMKDIPRTPSRGRSECDSSPEPK X;X;X;X;X;X;Phospho (STY);X;X;Oxidation (M);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX DIPRT(1)PSR DIPRT(37.4)PS(-37.4)R 5 3 -0.11902 59774 0 0 61681 0 0 60084 0 0 58404 0 0 28505 0 0 58788 0 0 32022 0 0 52671 0 0 61156 0 0 3942.2 0 0 56563 0 0 58250 0 0 60103 0 0 60173 0 0 30868 0 0 58840 0 0 33225 0 0 53188 0 0 59107 0 0 4931.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 79057000 79057000 0 0 NaN 4822 2226 1472 1472 706 750 800 884 800 884 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6897 800 884 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6897 800 884 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6897 Q9UQ35 1208 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.998788 29.1602 0.00647939 85.45 63.893 85.45 1 T QDRPESSLVFKDTLRTPPRERSGAGSSPETK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX DT(0.001)LRT(0.999)PPRER DT(-29.16)LRT(29.16)PPRER 5 4 -0.091036 30916 0 0 30625 0 0 29733 0 0 25242 0 0 20934 0 0 35095 0 0 20235 0 0 25658 0 0 31817 0 0 1565.9 0 0 29250 0 0 28900 0 0 29899 0 0 26405 0 0 21765 0 0 34622 0 0 20948 0 0 26150 0 0 30903 0 0 2068.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 99936000 99936000 0 0 NaN 4823 2226 1208 1208 827 875 931 1026 931 1026 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6417 931 1026 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6417 931 1026 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6417 Q9UQ35 233 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 1 62.3026 0.0438768 62.303 33.904 62.303 2 T HRSESESKKRKHRSPTPKSKRKSKDKKRKRS X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX HRS(1)PT(1)PK HRS(62.3)PT(62.3)PK 5 3 -0.21194 0 5401.6 0 0 5225.3 0 0 5070 0 0 5665.1 0 0 5130.3 0 0 5736.8 0 0 3900.6 0 0 4732.9 0 0 6982.1 0 0 2545 0 0 5110.1 0 0 4938.6 0 0 5122.7 0 0 5791.1 0 0 5188.2 0 0 5739.3 0 0 4113.9 0 0 4863 0 0 6758.5 0 0 2505.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 5194900 0 5194900 0 NaN 4824 2226 233 233 1744 1839;1840 1986 2213 1986 2213 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5088 1986 2213 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5088 1986 2213 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5088 Q9UQ35 1177 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.55099 0.888876 0.0343877 58.904 43.814 58.904 1 T AESKEKMALPPQEDATASPPRQKDKFSPFPV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPXXXXXXXX MALPPQEDAT(0.551)AS(0.449)PPRQK MALPPQEDAT(0.89)AS(-0.89)PPRQK 10 3 -3.57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4825 2226 1177 1177 2662;2663 2810;2811;2812 3017 3362 3017 3362 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13811 3017 3362 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13811 3017 3362 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13811 Q9UQ35 2104 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.703774 2.01249 0.0392736 58.758 48.553 58.758 2 T RSATPPATRNHSGSRTPPVALNSSRMSCFSR X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPPPXXXXXX NHS(0.529)GS(0.766)RT(0.704)PPVALNSSR NHS(-2.01)GS(3.04)RT(2.01)PPVALNS(-34.88)S(-38.35)R 7 3 -2.1226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN 4826 2226 2104 2104 2823 2993 3206 3559 3206 3559 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7468 3206 3559 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7468 3206 3559 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7468 Q9UQ35 856 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.55693 1.01089 1.14923E-07 142.01 119.45 142.01 2 T HPKVKSGTPPRQGSITSPQANEQSVTPQRRS X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPPPPPPPPPPPPXX S(0.044)GT(0.955)PPRQGS(0.002)IT(0.557)S(0.442)PQANEQSVTPQR S(-13.39)GT(13.39)PPRQGS(-26.34)IT(1.01)S(-1.01)PQANEQS(-58.72)VT(-67.87)PQR 11 3 0.19792 0 5773.5 0 0 6128.6 0 0 5658.1 0 0 6253.8 0 0 5179 0 0 5609.3 0 0 6002.8 0 0 5418.2 0 0 6723.6 0 0 0 0 0 5462.8 0 0 5790.2 0 0 5699.7 0 0 6403.2 0 0 5296.3 0 0 5648.9 0 0 6090.5 0 0 5442.2 0 0 6603.6 0 0 0 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 0 0 19418000 0 19418000 0 NaN 4827 2226 856 856 3038;3039;3826;3827 3220;3221;3222;4078;4079;4080 4351 4835 4351 4835 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9558 4351 4835 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9558 4351 4835 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9558 Q9UQ35 866 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.999957 43.648 4.08432E-16 243.39 218.75 243.39 1;2;3 T RQGSITSPQANEQSVTPQRRSCFESSPDPEL X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X PPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX QGSITSPQANEQSVT(1)PQRR QGS(-200.94)IT(-176.54)S(-168.82)PQANEQS(-43.65)VT(43.65)PQRR 15 3 0.1361 16609 26476 4833.9 15285 25901 4703.3 16360 28457 4943.9 13794 24865 4354.9 12327 17427 2808.8 17707 28197 5045.7 12087 17293 3510.8 16457 25071 3959.6 17741 24838 4526.4 2291.5 4852.4 521.91 15715 25061 4574.5 14431 24462 4441 16438 28405 4947.1 14317 25648 4503.8 12749 18341 2987.4 17563 28085 5014.1 12470 17816 3567.8 16626 25416 4029.6 17265 24188 4423.2 2538.6 5149.4 583.08 1 2 1 1 2 1 1 2 1 1 2 1 1 2 1 1 2 1 1 2 1 1 2 1 1 2 1 1 2 1 361640000 150680000 180940000 30023000 NaN 4828 2226 866 866 3038;3039;3826;3827 3220;3221;3222;4078;4079;4080 3445;3446;3447;4352;4353 3818;3819;3820;4836;4837 3445 3818 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7884 3445 3818 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7884 3445 3818 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7884 Q9UQ35 848 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.955356 13.3932 1.14923E-07 142.01 119.45 142.01 1;2;3 T QSHSSSSPHPKVKSGTPPRQGSITSPQANEQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPPPPPP S(0.044)GT(0.955)PPRQGS(0.002)IT(0.557)S(0.442)PQANEQSVTPQR S(-13.39)GT(13.39)PPRQGS(-26.34)IT(1.01)S(-1.01)PQANEQS(-58.72)VT(-67.87)PQR 3 3 0.19792 33999 9637.5 4833.9 31742 9515.8 4703.3 33990 10250 4943.9 30289 9996.9 4354.9 22261 8276.1 2808.8 32278 10165 5045.7 24426 10685 3510.8 30248 9569.5 3959.6 34333 10228 4526.4 4899.2 1097.6 521.91 32171 9121.8 4574.5 29977 8992 4441 34087 10266 4947.1 31220 10238 4503.8 23323 8548.8 2987.4 32249 10176 5014.1 25031 10749 3567.8 30567 9655.1 4029.6 33456 10111 4423.2 5313.2 1129.6 583.08 1 2 1 1 2 1 1 2 1 1 2 1 1 2 1 1 2 1 1 2 1 1 2 1 1 2 1 1 1 1 102280000 39638000 32618000 30023000 NaN 4829 2226 848 848 3826;3827;5149 4078;4079;4080;5486 4351;4352;4353;5844 4835;4836;4837;6496 4351 4835 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9558 4351 4835 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9558 4351 4835 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9558 Q9UQ35 2034 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 1 71.8962 0.0153323 71.896 21.807 71.896 2 T RSRTPPAIRRRSRSRTPLLPRKRSRSRSPLA X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX S(1)RT(1)PLLPR S(71.9)RT(71.9)PLLPR 3 2 -0.29951 0 78712 0 0 73543 0 0 77694 0 0 75304 0 0 40670 0 0 76752 0 0 44612 0 0 62821 0 0 82599 0 0 6755.6 0 0 74478 0 0 69483 0 0 77846 0 0 77235 0 0 43550 0 0 76706 0 0 46263 0 0 63757 0 0 79890 0 0 7815.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 167790000 0 167790000 0 NaN 4830 2226 2034 2034 4314 4599 4900 5443 4900 5443 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11655 4900 5443 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11655 4900 5443 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11655 Q9UQ35 2022 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 1 49.7767 0.0446138 49.777 29.523 49.777 2 T RSRTSPVTRRRSRSRTPPAIRRRSRSRTPLL X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX S(1)RT(1)PPAIR S(49.78)RT(49.78)PPAIR 3 2 -0.44252 0 57830 0 0 55739 0 0 60936 0 0 54756 0 0 42223 0 0 58180 0 0 45233 0 0 51956 0 0 56296 0 0 9201.6 0 0 54734 0 0 52650 0 0 60957 0 0 56336 0 0 44006 0 0 58103 0 0 46201 0 0 52634 0 0 55078 0 0 9866.8 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 51729000 0 51729000 0 NaN 4831 2226 2022 2022 4315 4600 4901 5444;5445 4901 5445 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7556 4901 5445 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7556 4901 5445 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7556 Q9UQ35 1856 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.858758 7.40977 0.0022696 110.41 62.805 60.301 1;2 T RSRTPPTSRKRSRSRTSPAPWKRSRSRASPA X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX S(0.919)RT(0.859)S(0.222)PAPWK S(9.83)RT(7.41)S(-7.41)PAPWK 3 3 -0.71786 88675 8764.3 0 91324 8314.2 0 90458 9186.3 0 91393 9498.5 0 67705 6970.1 0 89545 8606.5 0 65599 6727.9 0 82280 8209.3 0 98717 10057 0 17077 2761.2 0 83916 8294.8 0 86271 7860.9 0 90701 9198.2 0 93806 9666.1 0 70052 7203.8 0 89779 8666.8 0 67782 6951.2 0 83329 8333.1 0 95999 9782 0 17984 2790 0 3 1 0 3 1 0 3 1 0 3 1 0 3 1 0 3 1 0 3 1 0 3 1 0 3 1 0 3 1 0 336470000 60115000 276360000 0 NaN 4832 2226 1856 1856 4318;4925;4926 4603;4604;5250;5251 4906;5593;5594 5450;6215;6216;6217 4906 5450 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13397 5593 6216 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14538 5593 6216 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14538 Q9UQ35 1043 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.813793 7.73422 5.14369E-16 235.37 214.99 235.37 1 T SCPGSLSLCAGVKSSTPPGESYFGVSSLQLK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP S(0.049)S(0.137)T(0.814)PPGESYFGVSSLQLK S(-12.2)S(-7.73)T(7.73)PPGES(-86.26)Y(-139.16)FGVS(-201.28)S(-211.33)LQLK 3 3 -0.14624 46533 0 0 60624 0 0 66483 0 0 63447 0 0 45262 0 0 56541 0 0 59270 0 0 70100 0 0 68659 0 0 67909 0 0 44107 0 0 57286 0 0 65564 0 0 64862 0 0 47392 0 0 57280 0 0 59916 0 0 71836 0 0 67348 0 0 65566 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 1210500000 1210500000 0 0 NaN 4833 2226 1043 1043 4482 4774 5083 5640;5641;5642 5083 5642 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22277 5083 5642 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22277 5083 5642 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 22277 Q9UQ35 903 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.836918 9.77868 0.0171451 64.121 31.122 64.121 2 T RHSCSGSSPPRVKSSTPPRQSPSRSSSPQPK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX S(0.074)S(0.09)T(0.837)PPRQS(0.918)PS(0.082)R S(-10.67)S(-9.78)T(9.78)PPRQS(10.67)PS(-10.67)R 3 2 0.32051 0 1540.5 0 0 1771.7 0 0 1488.9 0 0 1596 0 0 908.57 0 0 1184.6 0 0 511.41 0 0 1530.5 0 0 1496.2 0 0 1906.4 0 0 1457.5 0 0 1672.7 0 0 1494.4 0 0 1642.9 0 0 951.6 0 0 1213.7 0 0 566.61 0 0 1579.3 0 0 1434.5 0 0 1830.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 2261700 0 2261700 0 NaN 4834 2226 903 903 4483 4775 5085 5644 5085 5644 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5091 5085 5644 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5091 5085 5644 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 5091 Q9UQ35 2289 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.681332 3.3002 1.24941E-07 150.56 130.49 150.56 1 T RTAVAPSAVNLADPRTPTAPAVNLAGARTPA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPPPPPPPPPPXXX TAVAPSAVNLADPRT(0.681)PT(0.319)APAVNLAGAR T(-96.86)AVAPS(-71.01)AVNLADPRT(3.3)PT(-3.3)APAVNLAGAR 15 4 0.13498 5150.9 0 0 4657.4 0 0 4519.7 0 0 4072.7 0 0 3517.7 0 0 5428.7 0 0 3716.7 0 0 3605 0 0 4482 0 0 6670.2 0 0 4871.7 0 0 4396.3 0 0 4575.5 0 0 4239.2 0 0 3632.5 0 0 5370.6 0 0 3794.7 0 0 3887.7 0 0 4389.9 0 0 6364.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 21900000 21900000 0 0 NaN 4835 2226 2289 2289 4644 4955 5279 5865 5279 5865 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17501 5279 5865 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17501 5279 5865 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17501 Q9UQ35 2316 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.999882 39.2888 4.1532E-19 249.97 230.66 249.97 1 T RTPAALAALSLTGSGTPPTAANYPSSSRTPQ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XPPPPPPPPPPPPPPPPPPPPPPPPPPPXXX TPAALAALSLTGSGT(1)PPTAANYPSSSR T(-160.22)PAALAALS(-114.27)LT(-76.95)GS(-39.29)GT(39.29)PPT(-66.48)AANY(-159.28)PS(-134.92)S(-140.89)S(-146.79)R 15 3 -0.27208 2447.5 0 0 3345.7 0 0 3460.7 0 0 3476 0 0 3739.5 0 0 3256.7 0 0 3099.8 0 0 3817.1 0 0 3410.8 0 0 25180 0 0 2319.7 0 0 3161.3 0 0 3428.7 0 0 3557.6 0 0 3769.7 0 0 3328.6 0 0 3194.5 0 0 4565.9 0 0 3352.2 0 0 23799 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 20847000 20847000 0 0 NaN 4836 2226 2316 2316 4821 5144 5483 6101 5483 6101 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21595 5483 6101 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21595 5483 6101 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21595 Q9UQ35 2397 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.962516 14.0956 2.31563E-08 187.23 126.64 187.23 1 T SPRVPLSAYERVSGRTSPPLLDRARSRTPPS Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X XXXXXXXXXXXPPPPPPPPPPPPXXXXXXXX T(0.963)S(0.037)PPLLDR T(14.1)S(-14.1)PPLLDR 1 2 0.069994 51049 0 0 45752 0 0 52538 0 0 46776 0 0 40672 0 0 48023 0 0 41229 0 0 43883 0 0 49140 0 0 9810.3 0 0 48311 0 0 43226 0 0 52673 0 0 47986 0 0 41990 0 0 48047 0 0 42157 0 0 44473 0 0 48151 0 0 10253 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 3 0 0 1954000000 1954000000 0 0 NaN 4837 2226 2397 2397 4940;5249 5265;5595 5608;5964 6232;6233;6628 5608 6232 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13248 5608 6232 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13248 5608 6232 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13248 Q9UQ35 1531 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 0.999638 34.4116 0.000689399 101.43 51.948 101.43 1 T RSGSESSVDQKTVARTPLGQRSRSGSSQELD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX TVART(1)PLGQR T(-34.41)VART(34.41)PLGQR 5 3 0.40501 17978 0 0 13970 0 0 18505 0 0 14219 0 0 12602 0 0 17097 0 0 11664 0 0 14328 0 0 13653 0 0 2120.6 0 0 17014 0 0 13199 0 0 18530 0 0 14631 0 0 13125 0 0 16978 0 0 11972 0 0 14543 0 0 13387 0 0 2328.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 222060000 222060000 0 0 NaN 4838 2226 1531 1531 4999 5329 5679 6309 5679 6309 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7347 5679 6309 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7347 5679 6309 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 7347 Q9UQ35 983 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 SRRM2 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo sapiens GN=SRRM2 PE=1 SV=2 1 54.2675 0.0112453 90.913 65.476 54.267 1 T SHSGSSSPDTKVKPETPPRQSHSGSISPYPK X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX VKPET(1)PPR VKPET(54.27)PPR 5 2 -0.097061 51903 0 0 42894 0 0 54286 0 0 43892 0 0 31979 0 0 51263 0 0 34251 0 0 44215 0 0 43443 0 0 6911.9 0 0 49122 0 0 40526 0 0 54257 0 0 45124 0 0 33810 0 0 50980 0 0 35007 0 0 44832 0 0 42475 0 0 7531.6 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 296350000 296350000 0 0 NaN 4839 2226 983 983 5147 5484 5841;5842 6493;6494 5842 6494 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8566 5841 6493 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8557 5841 6493 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8557 Q9UQ80 386 Q9UQ80 Q9UQ80 Proliferation-associated protein 2G4 PA2G4 sp|Q9UQ80|PA2G4_HUMAN Proliferation-associated protein 2G4 OS=Homo sapiens GN=PA2G4 PE=1 SV=3 0.999942 42.7257 4.82449E-16 239.86 228.55 239.86 1 T KKKASKTAENATSGETLEENEAGD_______ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPXXXXXXX TAENATSGET(1)LEENEAGD T(-86.12)AENAT(-52.92)S(-42.73)GET(42.73)LEENEAGD 10 2 0.1981 3584.9 0 0 2621.3 0 0 3193.3 0 0 2806.2 0 0 8646.2 0 0 3296.3 0 0 8661.3 0 0 4422.6 0 0 3083 0 0 3906 0 0 3390.8 0 0 2477.3 0 0 3304.7 0 0 2877.9 0 0 8447.1 0 0 3303.6 0 0 8663 0 0 4510.2 0 0 3278.6 0 0 3780.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 38228000 38228000 0 0 0.06944 4840 2227 386 386 4608 4915 5235 5813 5235 5813 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10214 5235 5813 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10214 5235 5813 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10214 Q9Y277 4 Q9Y277 Q9Y277 Voltage-dependent anion-selective channel protein 3 VDAC3 sp|Q9Y277|VDAC3_HUMAN Voltage-dependent anion-selective channel protein 3 OS=Homo sapiens GN=VDAC3 PE=1 SV=1 0.989891 19.9101 0.000109885 93.345 47.888 93.345 1 T ____________MCNTPTYCDLGKAAKDVFN X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX CNT(0.99)PT(0.01)YCDLGK CNT(19.91)PT(-19.91)Y(-55.26)CDLGK 3 2 -0.22805 17799 0 0 15304 0 0 17922 0 0 15627 0 0 13411 0 0 17616 0 0 15105 0 0 16777 0 0 13258 0 0 15971 0 0 16843 0 0 14459 0 0 17987 0 0 16057 0 0 13899 0 0 17588 0 0 15243 0 0 17343 0 0 13160 0 0 15427 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 18274000 18274000 0 0 NaN 4841 2238 4 4 614 653 696 772 696 772 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14663 696 772 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14663 696 772 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14663 Q9Y2F5 1642 Q9Y2F5 Q9Y2F5 Little elongation complex subunit 1 ICE1 sp|Q9Y2F5|ICE1_HUMAN Little elongation complex subunit 1 OS=Homo sapiens GN=ICE1 PE=1 SV=5 1 122.377 4.79025E-05 122.38 109.32 122.38 1 T EVGPPLPPLLAPLIATPPRTSQPLSPLISSS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX QEVGPPLPPLLAPLIAT(1)PPR QEVGPPLPPLLAPLIAT(122.38)PPR 17 3 -0.75038 3698.8 0 0 3503.1 0 0 3743.2 0 0 4041.6 0 0 3795.7 0 0 3775.8 0 0 3385.5 0 0 4686.6 0 0 3811.4 0 0 26068 0 0 3500.1 0 0 3312.3 0 0 3766.5 0 0 4112.7 0 0 3843.4 0 0 3857 0 0 3477.5 0 0 5451.2 0 0 3742.6 0 0 24655 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11141000 11141000 0 0 NaN 4842 2243 1642 1642 3025 3206 3429 3802 3429 3802 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24204 3429 3802 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24204 3429 3802 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24204 Q9Y2J2 462 Q9Y2J2 Q9Y2J2 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed EPB41L3 sp|Q9Y2J2|E41L3_HUMAN Band 4.1-like protein 3 OS=Homo sapiens GN=EPB41L3 PE=1 SV=2 0.524924 0.433326 1.57936E-10 194.1 147.51 194.1 1 T EVGTGQYATTKGISQTNLITTVTPEKKAEEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXPPPPPPPPPPPPPPPXXXXX GIS(0.475)QT(0.525)NLITTVTPEK GIS(-0.43)QT(0.43)NLIT(-77.5)T(-113.51)VT(-143.14)PEK 5 3 -0.66679 20786 0 0 5826.9 0 0 22670 0 0 5563.5 0 0 6194.5 0 0 22239 0 0 5663.8 0 0 12163 0 0 6692.7 0 0 10922 0 0 19676 0 0 5503 0 0 22516 0 0 5996.5 0 0 7252.4 0 0 21442 0 0 5818.9 0 0 12920 0 0 6560.1 0 0 10566 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 43546000 43546000 0 0 NaN 4843 2248 462 462 1479;1480 1556;1557;1558 1678 1858 1678 1858 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19775 1678 1858 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19775 1678 1858 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19775 Q9Y2J2 467 Q9Y2J2 Q9Y2J2 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed EPB41L3 sp|Q9Y2J2|E41L3_HUMAN Band 4.1-like protein 3 OS=Homo sapiens GN=EPB41L3 PE=1 SV=2 0.617918 2.40419 1.97134E-05 137.23 116.49 137.23 1 T QYATTKGISQTNLITTVTPEKKAEEERDEEE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPXXXXXXXXX GISQTNLIT(0.027)T(0.618)VT(0.355)PEKK GIS(-69.36)QT(-47.75)NLIT(-13.62)T(2.4)VT(-2.4)PEKK 10 3 0.29974 51846 0 0 9713.7 0 0 54180 0 0 10562 0 0 13488 0 0 50919 0 0 13139 0 0 27250 0 0 11494 0 0 20273 0 0 49068 0 0 9181 0 0 53923 0 0 11442 0 0 16083 0 0 48979 0 0 13346 0 0 28862 0 0 11410 0 0 19720 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 63044000 63044000 0 0 NaN 4844 2248 467 467 1479;1480 1556;1557;1558 1680 1860 1680 1860 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16412 1680 1860 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16412 1680 1860 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16412 Q9Y2J2 469 Q9Y2J2 Q9Y2J2 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed EPB41L3 sp|Q9Y2J2|E41L3_HUMAN Band 4.1-like protein 3 OS=Homo sapiens GN=EPB41L3 PE=1 SV=2 0.993761 22.2409 2.23232E-08 174.2 153.82 174.2 1;2 T ATTKGISQTNLITTVTPEKKAEEERDEEEDK X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPXXXXXXXXXXX GISQTNLITT(0.006)VT(0.994)PEKK GIS(-124.34)QT(-108.73)NLIT(-35.09)T(-22.24)VT(22.24)PEKK 12 4 0.099738 22516 31544 0 4807.8 6118.1 0 20501 31852 0 3145.5 6773.8 0 7102.4 6841.1 0 21318 33780 0 8997.9 6239.6 0 10134 16870 0 5165.3 6362.8 0 4798.2 17529 0 21298 29850 0 4532.3 5783.3 0 20599 31748 0 3623.1 7349 0 8021.8 8410.7 0 20426 32475 0 8963.1 6383.6 0 10744 18106 0 5259.2 6273 0 4752.6 16896 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 0 80172000 59475000 20697000 0 NaN 4845 2248 469 469 1479;1480 1556;1557;1558 1679;1683 1859;1863 1679 1859 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16407 1679 1859 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16407 1679 1859 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16407 Q9Y2W1 874 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 THRAP3 sp|Q9Y2W1|TR150_HUMAN Thyroid hormone receptor-associated protein 3 OS=Homo sapiens GN=THRAP3 PE=1 SV=2 1 70.396 4.65111E-07 165.66 140.73 165.66 1 T DFQKRNREEEWDPEYTPKSKKYYLHDDREGE X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPXXXXXXXXXXXXX NREEEWDPEYT(1)PK NREEEWDPEY(-70.4)T(70.4)PK 11 3 -0.41455 42246 0 0 24334 0 0 43064 0 0 24634 0 0 19788 0 0 40993 0 0 17202 0 0 30161 0 0 26932 0 0 21125 0 0 39978 0 0 22989 0 0 43026 0 0 25538 0 0 21428 0 0 40263 0 0 17900 0 0 31310 0 0 26161 0 0 20590 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 38543000 38543000 0 0 NaN 4846 2257 874 874 921;2901 975;3075 1057;3293 1167;3650 3293 3650 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13604 3293 3650 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13604 3293 3650 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13604 Q9Y383 17 Q9Y383 Q9Y383 Putative RNA-binding protein Luc7-like 2 LUC7L2 sp|Q9Y383|LC7L2_HUMAN Putative RNA-binding protein Luc7-like 2 OS=Homo sapiens GN=LUC7L2 PE=1 SV=2 0.514864 0.258292 0.0144425 86.756 65.999 86.756 1 T SAQAQMRAMLDQLMGTSRDGDTTRQRIKFSD X;X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPXXXXXXXXXXXXX AMLDQLMGT(0.515)S(0.485)R AMLDQLMGT(0.26)S(-0.26)R 9 2 -0.15859 10495 0 0 32273 0 0 9940.8 0 0 30488 0 0 11492 0 0 10421 0 0 12139 0 0 17423 0 0 32985 0 0 13799 0 0 9928.9 0 0 30477 0 0 10062 0 0 31090 0 0 11599 0 0 11455 0 0 12896 0 0 17621 0 0 31662 0 0 13396 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 52347000 52347000 0 0 NaN 4847 2262 17 17 334 356;357 382 423 382 423 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16379 382 423 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16379 382 423 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16379 Q9Y385 267 Q9Y385 Q9Y385 Ubiquitin-conjugating enzyme E2 J1 UBE2J1 sp|Q9Y385|UB2J1_HUMAN Ubiquitin-conjugating enzyme E2 J1 OS=Homo sapiens GN=UBE2J1 PE=1 SV=2 0.63351 3.1641 1.50172E-15 235.26 216.69 235.26 1 T PRQRRAQQQSQRRLSTSPDVIQGHQPRDNHT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPPPPPPXXXX RLS(0.306)T(0.634)S(0.061)PDVIQGHQPR RLS(-3.16)T(3.16)S(-10.18)PDVIQGHQPR 4 3 -0.064496 18509 0 0 20592 0 0 19631 0 0 19776 0 0 22825 0 0 25698 0 0 29111 0 0 24578 0 0 21328 0 0 8235.4 0 0 17518 0 0 19448 0 0 19754 0 0 20450 0 0 23056 0 0 25496 0 0 29118 0 0 24945 0 0 21374 0 0 8323.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 224930000 224930000 0 0 NaN 4848 2263 267 267 3352 3554 3792 4210 3792 4210 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10078 3792 4210 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10078 3792 4210 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10078 Q9Y3Q8 229 Q9Y3Q8 Q9Y3Q8 TSC22 domain family protein 4 TSC22D4 sp|Q9Y3Q8|T22D4_HUMAN TSC22 domain family protein 4 OS=Homo sapiens GN=TSC22D4 PE=1 SV=2 0.998865 29.4455 7.30296E-07 150.91 125.46 150.91 1 T PSLRVEAEAGGSGARTPPLSRRKAVDMRLRM X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPXXXXXXXXXX VEAEAGGS(0.001)GART(0.999)PPLSR VEAEAGGS(-29.45)GART(29.45)PPLS(-74.42)R 12 3 -1.5013 20946 0 0 32891 0 0 21373 0 0 34931 0 0 34499 0 0 20512 0 0 33911 0 0 27722 0 0 34906 0 0 8240.5 0 0 19822 0 0 31083 0 0 21656 0 0 35510 0 0 34228 0 0 21310 0 0 34574 0 0 27776 0 0 34400 0 0 8401 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 159860000 159860000 0 0 NaN 4849 2269 229 229 5083 5418 5770 6412 5770 6412 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9309 5770 6412 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9309 5770 6412 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9309 Q9Y3Z3 592 Q9Y3Z3 Q9Y3Z3 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 SAMHD1 sp|Q9Y3Z3|SAMH1_HUMAN Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 OS=Homo sapiens GN=SAMHD1 PE=1 SV=2 1 90.9754 4.68647E-05 111.4 87.602 111.4 1 T NFTKPQDGDVIAPLITPQKKEWNDSTSVQNP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPXXXXXXXXXXXX NFTKPQDGDVIAPLIT(1)PQK NFT(-90.98)KPQDGDVIAPLIT(90.98)PQK 16 4 -0.35277 9085.1 0 0 2634.6 0 0 10210 0 0 2893.5 0 0 2747.3 0 0 8878.3 0 0 2502.8 0 0 5804.8 0 0 2768.1 0 0 5089.6 0 0 8601.1 0 0 2490.3 0 0 10124 0 0 3051.3 0 0 3225.4 0 0 8603.1 0 0 2566.6 0 0 6095.1 0 0 2720.1 0 0 4926.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8676500 8676500 0 0 NaN 4850 2272 592 592 2810 2980 3193 3545 3193 3545 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19600 3193 3545 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19600 3193 3545 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19600 Q9Y520 2673 Q9Y520 Q9Y520 Protein PRRC2C PRRC2C sp|Q9Y520|PRC2C_HUMAN Protein PRRC2C OS=Homo sapiens GN=PRRC2C PE=1 SV=4 0.999995 52.7135 9.89721E-05 118.08 88.751 118.08 1 T MELKAFGSGIDIKPGTPPIAGRSTTPTSSPF X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPXXXXXXXXX AFGSGIDIKPGT(1)PPIAGR AFGS(-52.71)GIDIKPGT(52.71)PPIAGR 12 3 0.32427 15428 0 0 17140 0 0 15946 0 0 17967 0 0 19156 0 0 16511 0 0 19618 0 0 16727 0 0 15979 0 0 21317 0 0 14600 0 0 16196 0 0 16067 0 0 18374 0 0 19253 0 0 16657 0 0 19847 0 0 17412 0 0 15921 0 0 20460 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 27680000 27680000 0 0 NaN 4851 2289 2673 2673 174 182 196 221 196 221 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18496 196 221 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18496 196 221 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 18496 Q9Y520 2682 Q9Y520 Q9Y520 Protein PRRC2C PRRC2C sp|Q9Y520|PRC2C_HUMAN Protein PRRC2C OS=Homo sapiens GN=PRRC2C PE=1 SV=4 0.937881 12.8129 0.0022919 98.634 60.458 98.634 1 T IDIKPGTPPIAGRSTTPTSSPFRATSTSPNS X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX S(0.001)T(0.008)T(0.938)PT(0.049)S(0.004)SPFR S(-32.08)T(-20.52)T(12.81)PT(-12.81)S(-23.79)S(-36.36)PFR 3 2 0.056857 28381 0 0 25871 0 0 29184 0 0 24873 0 0 24914 0 0 29183 0 0 26640 0 0 26789 0 0 28438 0 0 7037.6 0 0 26859 0 0 24434 0 0 29291 0 0 25669 0 0 25561 0 0 29042 0 0 27083 0 0 27176 0 0 27983 0 0 7246.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 39507000 39507000 0 0 NaN 4852 2289 2682 2682 4540 4842 5159 5729 5159 5729 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10998 5159 5729 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10998 5159 5729 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10998 Q9Y5M8 214 Q9Y5M8 Q9Y5M8 Signal recognition particle receptor subunit beta SRPRB sp|Q9Y5M8|SRPRB_HUMAN Signal recognition particle receptor subunit beta OS=Homo sapiens GN=SRPRB PE=1 SV=3 0.841373 7.27807 2.81922E-08 172.81 139.62 172.81 1 T KELNTLRVTRSAAPSTLDSSSTAPAQLGKKG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPPPPPPPXX S(0.001)AAPS(0.157)T(0.841)LDSSSTAPAQLGK S(-28.63)AAPS(-7.28)T(7.28)LDS(-49.2)S(-75.24)S(-92.7)T(-92.51)APAQLGK 6 3 0.17589 8185.4 0 0 11258 0 0 8737.2 0 0 11056 0 0 18352 0 0 7322.9 0 0 19770 0 0 15138 0 0 11522 0 0 14689 0 0 7747.5 0 0 10634 0 0 8886.5 0 0 11304 0 0 18068 0 0 7632.3 0 0 19830 0 0 15325 0 0 11719 0 0 14181 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 23749000 23749000 0 0 NaN 4853 2296 214 214 3573 3796 4049 4504 4049 4504 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13912 4049 4504 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13912 4049 4504 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13912 Q9Y5N6 195 Q9Y5N6 Q9Y5N6 Origin recognition complex subunit 6 ORC6 sp|Q9Y5N6|ORC6_HUMAN Origin recognition complex subunit 6 OS=Homo sapiens GN=ORC6 PE=1 SV=1 1 76.807 0.0232439 76.807 55.208 76.807 1 T EKIGQQVDREPGDVATPPRKRKKIVVEAPAK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPXXXXXXXXXXXX IGQQVDREPGDVAT(1)PPR IGQQVDREPGDVAT(76.81)PPR 14 3 -0.096475 16768 0 0 18143 0 0 18381 0 0 16728 0 0 18293 0 0 16062 0 0 17760 0 0 17368 0 0 19756 0 0 9881.1 0 0 15873 0 0 17131 0 0 18414 0 0 17252 0 0 18563 0 0 16164 0 0 18158 0 0 17668 0 0 19409 0 0 9706.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 51603000 51603000 0 0 NaN 4854 2297 195 195 1842 1945 2101 2355 2101 2355 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11243 2101 2355 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11243 2101 2355 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11243 Q9Y618 1391 Q9Y618 Q9Y618 Nuclear receptor corepressor 2 NCOR2 sp|Q9Y618|NCOR2_HUMAN Nuclear receptor corepressor 2 OS=Homo sapiens GN=NCOR2 PE=1 SV=2 0.999882 39.2898 0.0229862 66.953 28.551 66.953 1 T EDYLRREAKLLKREGTPPPPPPSRDLTEAYK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPXXXXXXX EGT(1)PPPPPPSR EGT(39.29)PPPPPPS(-39.29)R 3 2 -2.0955 11327 0 0 9997.7 0 0 10967 0 0 9799.3 0 0 15226 0 0 11041 0 0 13997 0 0 10293 0 0 9880.5 0 0 4530 0 0 10717 0 0 9443.4 0 0 11114 0 0 10094 0 0 15179 0 0 11010 0 0 14194 0 0 10490 0 0 9923.7 0 0 4503.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 5701700 5701700 0 0 NaN 4855 2306 1391 1391 984 1039 1125 1240 1125 1240 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6760 1125 1240 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6760 1125 1240 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 6760 Q9Y618 2273 Q9Y618 Q9Y618 Nuclear receptor corepressor 2 NCOR2 sp|Q9Y618|NCOR2_HUMAN Nuclear receptor corepressor 2 OS=Homo sapiens GN=NCOR2 PE=1 SV=2 0.607719 3.8718 3.16046E-07 158 118.35 158 1 T EQTEPSRMGSKSPGNTSQPPAFFSKLTESNS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPXXXXXX MGS(0.131)KS(0.249)PGNT(0.608)S(0.012)QPPAFFSK MGS(-6.67)KS(-3.87)PGNT(3.87)S(-16.9)QPPAFFS(-119.28)K 9 3 0.33051 23088 0 0 16898 0 0 25319 0 0 17772 0 0 17385 0 0 24689 0 0 14988 0 0 21264 0 0 21088 0 0 16662 0 0 21855 0 0 15968 0 0 25265 0 0 18305 0 0 18083 0 0 24426 0 0 15539 0 0 21964 0 0 20549 0 0 16182 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 31414000 31414000 0 0 NaN 4856 2306 2273 2273 2704;4107 2866;2867;4379 3076 3423 3076 3423 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17774 3076 3423 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17774 3076 3423 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17774 Q9Y679 433 Q9Y679 Q9Y679 Ancient ubiquitous protein 1 AUP1 sp|Q9Y679|AUP1_HUMAN Ancient ubiquitous protein 1 OS=Homo sapiens GN=AUP1 PE=1 SV=1 0.996802 25.7877 1.8554E-05 132.48 107.94 132.48 1 T LPTASASKFPSSGPVTPQPTALTFAKSSWAR X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPPPXXXXX FPS(0.001)S(0.003)GPVT(0.997)PQPTALTFAK FPS(-32.48)S(-25.79)GPVT(25.79)PQPT(-52.18)ALT(-94.24)FAK 8 3 0.78292 3835.8 0 0 7454 0 0 3662.2 0 0 7342.6 0 0 5654.6 0 0 3892.1 0 0 5017.6 0 0 6697.1 0 0 8649.2 0 0 18452 0 0 3629 0 0 7040.9 0 0 3720.8 0 0 7490.5 0 0 5615.1 0 0 4125.2 0 0 5237.5 0 0 7165 0 0 8380.1 0 0 17530 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8927200 8927200 0 0 NaN 4857 2309 433 433 1305 1376 1482 1644 1482 1644 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21629 1482 1644 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21629 1482 1644 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21629 Q9Y6G9 513 Q9Y6G9 Q9Y6G9 Cytoplasmic dynein 1 light intermediate chain 1 DYNC1LI1 sp|Q9Y6G9|DC1L1_HUMAN Cytoplasmic dynein 1 light intermediate chain 1 OS=Homo sapiens GN=DYNC1LI1 PE=1 SV=3 0.662168 6.08917 0.0471044 64.589 51.756 64.589 1 T ELDRITRKPVTVSPTTPTSPTEGEAS_____ X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPPPPPPPXXXXX KPVT(0.002)VS(0.023)PT(0.163)T(0.662)PT(0.077)S(0.069)PT(0.002)EGEAS(0.002) KPVT(-24.77)VS(-14.56)PT(-6.09)T(6.09)PT(-9.36)S(-9.82)PT(-25.7)EGEAS(-25.07) 9 3 0.064011 8571.1 0 0 9692.7 0 0 8461.3 0 0 10637 0 0 10413 0 0 8700.8 0 0 10679 0 0 9481.3 0 0 12194 0 0 9222 0 0 8110.1 0 0 9161.7 0 0 8550.7 0 0 10833 0 0 10457 0 0 8834.8 0 0 10899 0 0 9758.1 0 0 11967 0 0 8903.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 102410000 102410000 0 0 NaN 4858 2313 513 513 2175 2298 2473 2753 2473 2753 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12672 2473 2753 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12672 2473 2753 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12672 REV__O43933 REV__O43933 1 54.1434 0.0566042 54.143 23.316 54.143 2 T X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPPPPPXXXX T(1)QLLNPS(1)LLFIK T(54.14)QLLNPS(54.14)LLFIK 1 3 3.1321 0 8470.7 0 0 3678.6 0 0 7932.7 0 0 4327.7 0 0 4903.3 0 0 7936.1 0 0 4772.3 0 0 5178.2 0 0 4121.3 0 0 18694 0 0 8013.4 0 0 3478.8 0 0 7981.4 0 0 4461.9 0 0 5152.3 0 0 7794.3 0 0 4846.3 0 0 5864.2 0 0 4094.1 0 0 17722 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 18295000 0 18295000 0 NaN + 4859 2325 759 759 4871 5196 5535 6153 5535 6153 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23964 5535 6153 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23964 5535 6153 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23964 REV__O75923 REV__O75923 0.956732 13.4462 0.0566042 47.288 11.095 47.288 1 T X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPXXXXXXXXX DELPLT(0.957)CT(0.043)LEFK DELPLT(13.45)CT(-13.45)LEFK 6 3 -2.2742 9455.9 0 0 4294.9 0 0 10680 0 0 3389.5 0 0 8539.6 0 0 9306.1 0 0 8721.5 0 0 8264 0 0 4353 0 0 5306.3 0 0 8952.3 0 0 4052 0 0 10658 0 0 3630.5 0 0 8790.9 0 0 9060.8 0 0 8749.4 0 0 8489.7 0 0 4480.4 0 0 5187.8 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16004000 16004000 0 0 NaN + 4860 2328 445 445 661 705 752 832 752 832 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19412 752 832 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19412 752 832 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19412 REV__Q14117 REV__Q14117 0.25 0 0.0566042 40.113 17.234 40.113 T X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S(0.25)S(0.25)GMFPFQMHT(0.25)HT(0.25)DIGGPLVK S(0)S(0)GMFPFQMHT(0)HT(0)DIGGPLVK 11 2 -0.083992 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN + 4861 2332 452 452 4349 4635 4938 5482 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24213 4938 5482 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24213 4938 5482 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24213 REV__Q8NET4 REV__Q8NET4 0.5 0 0.0489318 41.029 41.029 41.029 1 T X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MGS(0.5)AT(0.5)RK MGS(0)AT(0)RK 5 3 -2.2974 34005 0 0 20959 0 0 31703 0 0 21226 0 0 17533 0 0 33059 0 0 17815 0 0 22849 0 0 21408 0 0 1192.3 0 0 32168 0 0 19801 0 0 31883 0 0 21968 0 0 18637 0 0 32483 0 0 18219 0 0 23351 0 0 20971 0 0 1651.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 16669000 16669000 0 0 NaN + 4862 2340 897 897 2703 2865 3074 3421 3074 3421 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9019 3074 3421 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9019 3074 3421 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9019 REV__Q8WW32 REV__Q8WW32 0.930773 11.2857 0.0446941 51.875 20.048 51.875 1 T X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX EFGVY(0.069)T(0.931)NPQQK EFGVY(-11.29)T(11.29)NPQQK 6 3 -2.3091 12205 0 0 6897.9 0 0 12999 0 0 7365.2 0 0 7111.5 0 0 12441 0 0 6998.1 0 0 8486.5 0 0 6250.7 0 0 4100 0 0 11552 0 0 6518.9 0 0 12972 0 0 7615.4 0 0 7562.1 0 0 12202 0 0 7108.5 0 0 8789.3 0 0 6199.3 0 0 4057.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9098300 9098300 0 0 NaN + 4863 2342 153 153 943 997 1082 1194 1082 1194 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8178 1082 1194 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8178 1082 1194 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8178 O43852 47 O43852 O43852 Calumenin CALU sp|O43852|CALU_HUMAN Calumenin OS=Homo sapiens GN=CALU PE=1 SV=2 1 84.3648 0.0100859 84.365 63.74 84.365 2 Y PQLSDKVHNDAQSFDYDHDAFLGAEEAKTFD X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXPPPPPPPPPPPPPPPPPPPPPPXXX VHNDAQS(1)FDY(1)DHDAFLGAEEAK VHNDAQS(84.36)FDY(84.36)DHDAFLGAEEAK 10 3 -3.4327 0 1941.6 0 0 2926.1 0 0 2252.6 0 0 2619.8 0 0 3214.9 0 0 2397.5 0 0 2864.3 0 0 3774 0 0 2658.7 0 0 51629 0 0 1838.4 0 0 2762.5 0 0 2261.5 0 0 2705.1 0 0 3200.6 0 0 2527.5 0 0 2926.8 0 0 5287.9 0 0 2632.1 0 0 48702 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 24648000 0 24648000 0 NaN 4864 132 47 47 5130 5467 5823 6474 5823 6474 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17593 5823 6474 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17593 5823 6474 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17593 P00488 84 P00488 P00488 Coagulation factor XIII A chain F13A1 sp|P00488|F13A_HUMAN Coagulation factor XIII A chain OS=Homo sapiens GN=F13A1 PE=1 SV=4 0.999891 39.6252 0.0529159 46.158 10.72 46.158 2 Y KYENNKLIVRRGQSFYVQIDFSRPYDPRRDL X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPPPXXXXXXXX RGQS(1)FY(1)VQIDFSR RGQS(39.77)FY(39.63)VQIDFS(-39.63)R 6 2 0.087772 0 4783.8 0 0 7263.7 0 0 6062.9 0 0 6778.2 0 0 6912.7 0 0 6706.5 0 0 6604.7 0 0 7928.2 0 0 6974.6 0 0 49740 0 0 4531.5 0 0 6859 0 0 6041.2 0 0 6988.1 0 0 6960.8 0 0 6834.5 0 0 6747.9 0 0 9404 0 0 6866.2 0 0 47019 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 77953000 0 77953000 0 NaN 4865 280 84 84 3247 3444 3680 4083 3680 4083 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23487 3680 4083 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23487 3680 4083 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 23487 P00519;P42684 393;439 P00519;P42684 P42684 Tyrosine-protein kinase ABL1;Abelson tyrosine-protein kinase 2 ABL1;ABL2 sp|P00519|ABL1_HUMAN Tyrosine-protein kinase ABL1 OS=Homo sapiens GN=ABL1 PE=1 SV=4;sp|P42684|ABL2_HUMAN Abelson tyrosine-protein kinase 2 OS=Homo sapiens GN=ABL2 PE=1 SV=1 0.998587 29.0936 1.35919E-07 170.56 140.07 170.56 + 1 Y KVADFGLSRLMTGDTYTAHAGAKFPIKWTAP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPPPPXXXXXXXX LMTGDT(0.001)Y(0.999)TAHAGAK LMT(-39.43)GDT(-29.09)Y(29.09)T(-41.6)AHAGAK 7 3 -0.71058 8332.3 0 0 35352 0 0 8642.2 0 0 35731 0 0 8059.2 0 0 10463 0 0 7332.4 0 0 17188 0 0 39097 0 0 6350 0 0 7885.6 0 0 33398 0 0 8675.9 0 0 36258 0 0 8232.6 0 0 11712 0 0 8368.5 0 0 17171 0 0 37230 0 0 6377.1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 37531000 37531000 0 0 NaN 4866 281;590 393;439 439 2471 2609 2803 3130 2803 3130 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11959 2803 3130 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11959 2803 3130 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11959 P00519;P42684 264;310 P00519;P42684 P42684 Tyrosine-protein kinase ABL1;Abelson tyrosine-protein kinase 2 ABL1;ABL2 sp|P00519|ABL1_HUMAN Tyrosine-protein kinase ABL1 OS=Homo sapiens GN=ABL1 PE=1 SV=4;sp|P42684|ABL2_HUMAN Abelson tyrosine-protein kinase 2 OS=Homo sapiens GN=ABL2 PE=1 SV=1 0.760729 5.05024 0.00102412 101.54 40.782 101.54 1 Y GGGQYGEVYEGVWKKYSLTVAVKTLKEDTME;GGGQYGEVYVGVWKKYSLTVAVKTLKEDTME X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXXPPPPPPPPXXXXXXXX Y(0.761)S(0.238)LT(0.001)VAVK Y(5.05)S(-5.05)LT(-27.13)VAVK 1 2 1.4487 21293 0 0 98756 0 0 22395 0 0 96324 0 0 24096 0 0 18901 0 0 24605 0 0 50124 0 0 107160 0 0 23667 0 0 20153 0 0 93278 0 0 22509 0 0 97807 0 0 24437 0 0 22837 0 0 27282 0 0 49782 0 0 102240 0 0 23445 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 21623000 21623000 0 0 NaN 4867 281;590 264;310 310 5428 5781 6171 6867;6868 6171 6867 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15937 6171 6867 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15937 6171 6867 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15937 P06493;P24941;Q00526 15;15;15 P06493;P24941 P06493 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 CDK1;CDK2;CDK3 sp|P06493|CDK1_HUMAN Cyclin-dependent kinase 1 OS=Homo sapiens GN=CDK1 PE=1 SV=3;sp|P24941|CDK2_HUMAN Cyclin-dependent kinase 2 OS=Homo sapiens GN=CDK2 PE=1 SV=2;sp|Q00526|CDK3_HUMAN Cyclin-dependent kinase 3 OS=Homo sapiens GN=CDK3 PE=1 SV=1 0.698632 3.65196 2.85203E-10 188.3 86.238 188.3 + 1 Y _MEDYTKIEKIGEGTYGVVYKGRHKTTGQVV;_MENFQKVEKIGEGTYGVVYKARNKLTGEVV X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPPXXXXXXXXXX IGEGT(0.301)Y(0.699)GVVYK IGEGT(-3.65)Y(3.65)GVVY(-43.64)K 6 2 -0.42523 75685 0 0 162160 0 0 83667 0 0 148240 0 0 33726 0 0 66466 0 0 43406 0 0 92456 0 0 162620 0 0 33691 0 0 71647 0 0 153110 0 0 83196 0 0 151740 0 0 37423 0 0 70661 0 0 46983 0 0 92748 0 0 155400 0 0 33864 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1767600000 1767600000 0 0 NaN 4868 312;471 15;15 15 1837 1940 2096 2350 2096 2350 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16490 2096 2350 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16490 2096 2350 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 16490 P06733;P13929;P09104 44;44;44 P06733 P06733 Alpha-enolase;Beta-enolase;Gamma-enolase ENO1;ENO3;ENO2 sp|P06733|ENOA_HUMAN Alpha-enolase OS=Homo sapiens GN=ENO1 PE=1 SV=2;sp|P13929|ENOB_HUMAN Beta-enolase OS=Homo sapiens GN=ENO3 PE=1 SV=5;sp|P09104|ENOG_HUMAN Gamma-enolase OS=Homo sapiens GN=ENO2 PE=1 SV=3 1 66.4152 1.9737E-08 173.28 152.62 173.28 + 1 Y GLFRAAVPSGASTGIYEALELRDNDKTRYMG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXPPPPPPPPPPPPPPPPPPXXXXXXXXX AAVPSGASTGIY(1)EALELR AAVPS(-121.97)GAS(-89.11)T(-66.42)GIY(66.42)EALELR 12 3 0.51289 3909.1 0 0 2947.6 0 0 3869 0 0 3466.2 0 0 3834.7 0 0 3478.7 0 0 4621.4 0 0 4801.5 0 0 4182.4 0 0 11234 0 0 3698.8 0 0 2787.4 0 0 3899.2 0 0 3527.5 0 0 3904.2 0 0 3524.1 0 0 4654.4 0 0 5103.5 0 0 4145.4 0 0 10689 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 6925100 6925100 0 0 0.50656 4869 314 44 44 86 92 100 113 100 113 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21389 100 113 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21389 100 113 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21389 P11274 644 P11274 P11274 Breakpoint cluster region protein BCR sp|P11274|BCR_HUMAN Breakpoint cluster region protein OS=Homo sapiens GN=BCR PE=1 SV=2 0.999902 40.0706 6.60346E-06 137.27 110.3 137.27 + 1 Y DAKDPTTKNSLETLLYKPVDRVTRSTLVLHD X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPXXXXXXXXXX NSLETLLY(1)KPVDR NS(-82.87)LET(-40.07)LLY(40.07)KPVDR 8 3 -0.77726 4488 0 0 27957 0 0 3801 0 0 26795 0 0 5239.9 0 0 3300.4 0 0 6343.8 0 0 12164 0 0 31452 0 0 9531.5 0 0 4244.3 0 0 26404 0 0 3886.5 0 0 27206 0 0 5271.8 0 0 4485.9 0 0 7092 0 0 12145 0 0 29969 0 0 9256.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 42972000 42972000 0 0 NaN 4870 362 644 644 2917 3091 3311 3671 3311 3671 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20018 3311 3671 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20018 3311 3671 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 20018 P16104 143 P16104 P16104 Histone H2AX H2AFX sp|P16104|H2AX_HUMAN Histone H2AX OS=Homo sapiens GN=H2AFX PE=1 SV=2 0.999011 29.8955 0.00434276 91.937 70.474 91.937 2 Y KAPSGGKKATQASQEY_______________ X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPXXXXXXXXXXXXXXX KAT(0.966)QAS(0.035)QEY(0.999) KAT(14.56)QAS(-14.56)QEY(29.9) 9 2 -0.76239 0 14382 0 0 16199 0 0 14190 0 0 15096 0 0 37650 0 0 16062 0 0 41705 0 0 24875 0 0 16144 0 0 5336 0 0 13609 0 0 15297 0 0 14594 0 0 15583 0 0 36855 0 0 16177 0 0 41557 0 0 24771 0 0 17013 0 0 5600.2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 51998000 0 51998000 0 NaN 4871 402 143 143 530;2019 563;2136;2137 2303 2570 2303 2570 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9784 2303 2570 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9784 2303 2570 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9784 P18669;P15259;Q8N0Y7 92;92;92 P18669 P18669 Phosphoglycerate mutase 1;Phosphoglycerate mutase 2;Probable phosphoglycerate mutase 4 PGAM1;PGAM2;PGAM4 sp|P18669|PGAM1_HUMAN Phosphoglycerate mutase 1 OS=Homo sapiens GN=PGAM1 PE=1 SV=2;sp|P15259|PGAM2_HUMAN Phosphoglycerate mutase 2 OS=Homo sapiens GN=PGAM2 PE=1 SV=3;sp|Q8N0Y7|PGAM4_HUMAN Probable phosphoglycerate mutase 4 OS=Homo sapiens GN=PGAM4 PE=2 SV= 0.999806 37.1119 0.000265875 103.55 48.939 103.55 + 1 Y MWLPVVRTWRLNERHYGGLTGLNKAETAAKH X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPXXXXXXX HY(1)GGLTGLNK HY(37.11)GGLT(-37.11)GLNK 2 3 0.30146 9172.3 0 0 10850 0 0 8595.9 0 0 11850 0 0 6517.3 0 0 9528.2 0 0 6630.4 0 0 8774.7 0 0 11547 0 0 1957.6 0 0 8677.2 0 0 10255 0 0 8663.4 0 0 12069 0 0 6742.8 0 0 9648.5 0 0 6878.4 0 0 8889.8 0 0 11185 0 0 2046.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9007500 9007500 0 0 NaN 4872 431 92 92 1762 1861 2008 2238 2008 2238 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12592 2008 2238 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12592 2008 2238 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 12592 P22102 348 P22102 P22102 Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase GART sp|P22102|PUR2_HUMAN Trifunctional purine biosynthetic protein adenosine-3 OS=Homo sapiens GN=GART PE=1 SV=1 0.588396 1.55193 0.00255721 97.093 37.888 97.093 1 Y TALTVVMASKGYPGDYTKGVEITGFPEAQAL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPXXXXXXXXXXXXX GYPGDY(0.588)T(0.412)K GY(-53.88)PGDY(1.55)T(-1.55)K 6 2 -0.11709 35203 0 0 49201 0 0 38214 0 0 43987 0 0 56056 0 0 36718 0 0 59709 0 0 48614 0 0 50194 0 0 11426 0 0 33323 0 0 46449 0 0 38532 0 0 45366 0 0 55875 0 0 37300 0 0 60343 0 0 48646 0 0 49930 0 0 11884 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 33469000 33469000 0 0 NaN 4873 455 348 348 1686 1778 1920 2138 1920 2138 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10564 1920 2138 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10564 1920 2138 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 10564 P29353 427 P29353 P29353 SHC-transforming protein 1 SHC1 sp|P29353|SHC1_HUMAN SHC-transforming protein 1 OS=Homo sapiens GN=SHC1 PE=1 SV=4 0.999184 30.8821 9.48159E-08 170.49 142.4 170.49 + 1 Y PPPPCPGRELFDDPSYVNVQNLDKARQAVGG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXPPPPPPPPPPPPPPPPXXXXXXX ELFDDPS(0.001)Y(0.999)VNVQNLDK ELFDDPS(-30.88)Y(30.88)VNVQNLDK 8 3 -1.4387 6572.6 0 0 10158 0 0 6109.3 0 0 9634.7 0 0 3559.9 0 0 5937.4 0 0 5239 0 0 9908.8 0 0 10645 0 0 17600 0 0 6217.6 0 0 9592.9 0 0 6150.3 0 0 9865.2 0 0 3792 0 0 6199.3 0 0 5400.3 0 0 10316 0 0 10274 0 0 16801 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7183900 7183900 0 0 NaN 4874 498 427 427 1030 1086 1174 1293 1174 1293 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21175 1174 1293 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21175 1174 1293 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 21175 P29597 292 P29597 P29597 Non-receptor tyrosine-protein kinase TYK2 TYK2 sp|P29597|TYK2_HUMAN Non-receptor tyrosine-protein kinase TYK2 OS=Homo sapiens GN=TYK2 PE=1 SV=3 1 66.5325 0.0126949 66.533 49.901 66.533 1 Y VCHLRLLAQAEGEPCYIRDSGVAPTDPGPES X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXPPPPPPPPPPPPPXXXXXXXXXXXXX LLAQAEGEPCY(1)IR LLAQAEGEPCY(66.53)IR 11 3 0.74942 4450.2 0 0 4182.7 0 0 4537.8 0 0 5066.4 0 0 4626.9 0 0 4185.1 0 0 5257 0 0 5423.3 0 0 5342.1 0 0 4672.9 0 0 4211.3 0 0 3956.3 0 0 4566.5 0 0 5134 0 0 4699.1 0 0 4258.6 0 0 5323.3 0 0 5532.8 0 0 5267.5 0 0 4525.6 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7830100 7830100 0 0 NaN 4875 502 292 292 2426 2564 2758 3080 2758 3080 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17249 2758 3080 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17249 2758 3080 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17249 P42229 90 P42229 P42229 Signal transducer and activator of transcription 5A STAT5A sp|P42229|STA5A_HUMAN Signal transducer and activator of transcription 5A OS=Homo sapiens GN=STAT5A PE=1 SV=1 0.999987 49.0119 7.17289E-08 174.98 102.34 174.98 + 1 Y QVGEDGFLLKIKLGHYATQLQKTYDRCPLEL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPPPXXXXXXXXX LGHY(1)ATQLQK LGHY(49.01)AT(-49.01)QLQK 4 3 -0.61816 8202.5 0 0 18405 0 0 7929.1 0 0 16909 0 0 7178.6 0 0 8124.4 0 0 7035.2 0 0 10488 0 0 17351 0 0 3469.7 0 0 7760.6 0 0 17378 0 0 7990.4 0 0 17312 0 0 7336.9 0 0 8571.7 0 0 7450.6 0 0 10534 0 0 16683 0 0 3509.9 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 12897000 12897000 0 0 NaN 4876 583 90 90 2372 2506 2695 3009 2695 3009 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13694 2695 3009 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13694 2695 3009 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 13694 P49840;P49841 279;216 P49840 P49840 Glycogen synthase kinase-3 alpha;Glycogen synthase kinase-3 beta GSK3A;GSK3B sp|P49840|GSK3A_HUMAN Glycogen synthase kinase-3 alpha OS=Homo sapiens GN=GSK3A PE=1 SV=2;sp|P49841|GSK3B_HUMAN Glycogen synthase kinase-3 beta OS=Homo sapiens GN=GSK3B PE=1 SV=2 0.933455 11.4698 2.49203E-15 238.9 193.82 238.9 + 1 Y FGSAKQLVRGEPNVSYICSRYYRAPELIFGA X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX GEPNVS(0.067)Y(0.933)ICSR GEPNVS(-11.47)Y(11.47)ICS(-84.21)R 7 2 -0.34035 188140 0 0 247540 0 0 185900 0 0 244280 0 0 162560 0 0 182290 0 0 171040 0 0 192080 0 0 275240 0 0 29582 0 0 178020 0 0 233820 0 0 187050 0 0 250020 0 0 166560 0 0 185670 0 0 176550 0 0 193180 0 0 267160 0 0 32301 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 373060000 373060000 0 0 NaN 4877 658 279 279 1409 1486 1595 1764;1765 1595 1765 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11919 1595 1765 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11919 1595 1765 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 11919 Q01484 2718 Q01484 Q01484 Ankyrin-2 ANK2 sp|Q01484|ANK2_HUMAN Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4 0.98466 16.1816 0.0176768 66.886 12.281 66.886 3 Y SSPEEVQFQPVVSKQYTFKMNEDTQEEPGKS X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X XXXXXXXXXXXXXXPPPPPPPPPPPPPPPPP QY(0.985)T(0.972)FKMNEDT(0.68)QEEPGKS(0.363)EEEK QY(16.18)T(13.62)FKMNEDT(2.99)QEEPGKS(-2.99)EEEK 2 4 1.5275 0 0 12370 0 0 17277 0 0 11369 0 0 16224 0 0 13841 0 0 11045 0 0 9868.1 0 0 17726 0 0 15813 0 0 63899 0 0 11701 0 0 16315 0 0 11528 0 0 16639 0 0 13849 0 0 11507 0 0 10398 0 0 19447 0 0 15350 0 0 60579 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 34545000 0 0 34545000 NaN 4878 837 2718 2718 3175 3368 3600 3990 3600 3990 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17331 3600 3990 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17331 3600 3990 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17331 Q13523 849 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog PRPF4B sp|Q13523|PRP4B_HUMAN Serine/threonine-protein kinase PRP4 homolog OS=Homo sapiens GN=PRPF4B PE=1 SV=3 0.998738 29.7297 4.46665E-24 278.79 256.36 278.79 + 1 Y DFGSASHVADNDITPYLVSRFYRAPEIIIGK X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X PPPPPPPPPPPPPPPPPPPPXXXXXXXXXXX LCDFGSASHVADNDIT(0.001)PY(0.999)LVSR LCDFGS(-179.83)AS(-166.73)HVADNDIT(-29.73)PY(29.73)LVS(-37)R 18 3 -1.1601 4879.8 0 0 6695.5 0 0 5153.9 0 0 6592.6 0 0 5444.9 0 0 6674.8 0 0 9846.5 0 0 10345 0 0 8342.6 0 0 25369 0 0 4618.6 0 0 6324.4 0 0 5185.8 0 0 6776.7 0 0 5569.1 0 0 6780.6 0 0 9770.4 0 0 10999 0 0 8295.4 0 0 24127 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 36731000 36731000 0 0 NaN 4879 963 849 849 2305 2435 2624 2934 2624 2934 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19717 2624 2934 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19717 2624 2934 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 19717 Q9Y463;Q13627 273;321 Q9Y463 Q9Y463 Dual specificity tyrosine-phosphorylation-regulated kinase 1B;Dual specificity tyrosine-phosphorylation-regulated kinase 1A DYRK1B;DYRK1A sp|Q9Y463|DYR1B_HUMAN Dual specificity tyrosine-phosphorylation-regulated kinase 1B OS=Homo sapiens GN=DYRK1B PE=1 SV=1;sp|Q13627|DYR1A_HUMAN Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Homo sapiens GN=DYRK1A PE=1 SV=2 1 66.8027 1.36303E-08 183.9 136.24 183.9 + 1 Y VDFGSSCQLGQRIYQYIQSRFYRSPEVLLGT X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXPPPPPPPPXXXXXXXXXXX IYQY(1)IQSR IY(-66.8)QY(66.8)IQS(-83.33)R 4 2 0.46225 51382 0 0 83843 0 0 50585 0 0 74230 0 0 94992 0 0 54905 0 0 108810 0 0 82489 0 0 78075 0 0 6725.9 0 0 48617 0 0 79149 0 0 51552 0 0 76493 0 0 93943 0 0 56256 0 0 109260 0 0 81876 0 0 78341 0 0 8242.3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 409320000 409320000 0 0 NaN 4880 977 273 273 1987 2101 2265 2530 2265 2530 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15112 2265 2530 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15112 2265 2530 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 15112 Q16539 182 Q16539 Q16539 Mitogen-activated protein kinase 14 MAPK14 sp|Q16539|MK14_HUMAN Mitogen-activated protein kinase 14 OS=Homo sapiens GN=MAPK14 PE=1 SV=3 0.999994 52.6854 7.01118E-11 196.11 183.34 196.11 + 1 Y LDFGLARHTDDEMTGYVATRWYRAPEIMLNW X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPPXXXXXXXXXXX HTDDEMTGY(1)VATR HT(-149.22)DDEMT(-64.55)GY(52.69)VAT(-52.69)R 9 3 0.42188 16693 0 0 16936 0 0 16884 0 0 15860 0 0 23563 0 0 17830 0 0 23116 0 0 17999 0 0 16044 0 0 5698 0 0 15797 0 0 15993 0 0 17072 0 0 16382 0 0 23504 0 0 17796 0 0 23358 0 0 18219 0 0 16131 0 0 5781.9 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 2 0 0 112640000 112640000 0 0 NaN 4881 1105 182 182 1755 1853;1854 1999;2000 2228;2229 2000 2229 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8311 2000 2229 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8311 2000 2229 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8311 Q4AC94 2349 Q4AC94 Q4AC94 C2 domain-containing protein 3 C2CD3 sp|Q4AC94|C2CD3_HUMAN C2 domain-containing protein 3 OS=Homo sapiens GN=C2CD3 PE=1 SV=4 0.687105 0.487881 0.0509208 41.54 16.749 41.54 2 Y PEEETLRIARIFSSQYSQKD___________ X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXPPPPPPPPPPPPXXXXXXXXXXXX IARIFS(0.651)S(0.651)QY(0.687)S(0.011)QK IARIFS(0)S(0)QY(0.49)S(-19.67)QK 9 3 4.2648 0 11591 0 0 7355.7 0 0 10617 0 0 7620.3 0 0 5040.9 0 0 11450 0 0 6470.1 0 0 9189 0 0 8491.8 0 0 3905.9 0 0 10964 0 0 6950.2 0 0 10681 0 0 7869.7 0 0 5466.8 0 0 11285 0 0 6572.7 0 0 9422.5 0 0 8293.1 0 0 3890.5 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 18175000 0 18175000 0 NaN 4882 1135 2349 2349 1778 1877 2024 2255 2024 2255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17575 2024 2255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17575 2024 2255 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 17575 Q86WG5 685 Q86WG5 Q86WG5 Myotubularin-related protein 13 SBF2 sp|Q86WG5|MTMRD_HUMAN Myotubularin-related protein 13 OS=Homo sapiens GN=SBF2 PE=1 SV=1 0.969549 14.7364 0.030028 57.047 16.98 57.047 2 Y ETTFYNAVQEQVRSLYLSAKEDNHAPHLKQK X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX S(0.937)LY(0.97)LS(0.094)AK S(11.56)LY(14.74)LS(-11.56)AK 3 2 1.4346 0 19658 0 0 33663 0 0 19337 0 0 33435 0 0 84647 0 0 19521 0 0 84920 0 0 45892 0 0 33406 0 0 3600.8 0 0 18600 0 0 31799 0 0 20289 0 0 34120 0 0 81999 0 0 20525 0 0 85018 0 0 45119 0 0 35147 0 0 4452.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 128740000 0 128740000 0 NaN 4883 1389 685 685 4024 4289 4577 5085 4577 5085 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8997 4577 5085 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8997 4577 5085 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8997 Q8IXJ6 204 Q8IXJ6 Q8IXJ6 NAD-dependent protein deacetylase sirtuin-2 SIRT2 sp|Q8IXJ6|SIR2_HUMAN NAD-dependent protein deacetylase sirtuin-2 OS=Homo sapiens GN=SIRT2 PE=1 SV=2 0.99991 40.4428 0.0359371 55.864 32.417 55.864 3 Y TFYTSHCVSASCRHEYPLSWMKEKIFSEVTP X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;Phospho (STY);X;X;X;X;X;X;X;Phospho (STY);X;X;X;X XXXXXXXXXXXXXPPPPPPPPPPPPPPPPPP HEY(1)PLS(1)WMKEKIFS(1)EVTPK HEY(40.44)PLS(40.61)WMKEKIFS(40.61)EVT(-40.44)PK 3 4 -2.4634 0 0 4409.8 0 0 6684 0 0 4476.1 0 0 6091.4 0 0 6594.8 0 0 4409.4 0 0 5939.6 0 0 6219.3 0 0 5781.6 0 0 66114 0 0 4173 0 0 6310.8 0 0 4528.1 0 0 6263.6 0 0 6557.9 0 0 4642.1 0 0 6073.1 0 0 8160.4 0 0 5711.4 0 0 62398 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 40252000 0 0 40252000 NaN 4884 1425 204 204 1708 1801 1945 2169 1945 2169 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24022 1945 2169 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24022 1945 2169 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 24022 Q9H422 359 Q9H422 Q9H422 Homeodomain-interacting protein kinase 3 HIPK3 sp|Q9H422|HIPK3_HUMAN Homeodomain-interacting protein kinase 3 OS=Homo sapiens GN=HIPK3 PE=1 SV=1 0.999686 35.2333 6.42094E-10 196.52 131.05 196.52 + 1 Y DFGSASHVSKTVCSTYLQSRYYRAPEIILGL X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXPPPPPPPPPPXXXXXXXXXXX TVCSTY(1)LQSR T(-110.66)VCS(-48.37)T(-35.23)Y(35.23)LQS(-77.85)R 6 2 0.88451 24091 0 0 15178 0 0 25260 0 0 24114 0 0 13185 0 0 25772 0 0 16057 0 0 16611 0 0 11464 0 0 9193.2 0 0 22800 0 0 14389 0 0 25226 0 0 24240 0 0 14129 0 0 25661 0 0 16081 0 0 17294 0 0 11506 0 0 9041 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10684000 10684000 0 0 NaN 4885 1935 359 359 5000 5330 5680 6310 5680 6310 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9804 5680 6310 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9804 5680 6310 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 9804 Q9NR30 721 Q9NR30 Q9NR30 Nucleolar RNA helicase 2 DDX21 sp|Q9NR30|DDX21_HUMAN Nucleolar RNA helicase 2 OS=Homo sapiens GN=DDX21 PE=1 SV=5 1 44.973 0.0408698 44.973 44.973 44.973 1 Y SVATEQPELEGPREGYGGFRGQREGSRGFRG X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXXXXXXXXXXXXPPPPPPPXXXXXXXXXXX EGY(1)GGFR EGY(44.97)GGFR 3 2 -0.024792 11682 0 0 18642 0 0 11984 0 0 20374 0 0 6788.3 0 0 10145 0 0 7181 0 0 11808 0 0 20998 0 0 3476 0 0 11056 0 0 17621 0 0 11987 0 0 20649 0 0 7214.1 0 0 10653 0 0 7669.1 0 0 11885 0 0 20133 0 0 3546.4 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13546000 13546000 0 0 NaN 4886 2012 721 721 987 1042 1128 1245 1128 1245 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14223 1128 1245 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14223 1128 1245 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 14223 Q9NVU0 69 Q9NVU0 Q9NVU0 DNA-directed RNA polymerase III subunit RPC5 POLR3E sp|Q9NVU0|RPC5_HUMAN DNA-directed RNA polymerase III subunit RPC5 OS=Homo sapiens GN=POLR3E PE=1 SV=1 0.981922 17.3366 0.0438296 41.136 10.83 41.136 2 Y QKVELEMAIDTLNPNYCRSKGEQIALNVDGA X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X XXPPPPPPPPPPPPPPPPPPXXXXXXXXXXX VELEMAIDT(0.997)LNPNY(0.982)CRS(0.021)K VELEMAIDT(25.37)LNPNY(17.34)CRS(-17.34)K 14 3 0.57275 0 6050.6 0 0 12890 0 0 6281.7 0 0 13697 0 0 18642 0 0 6457.9 0 0 20799 0 0 15229 0 0 15917 0 0 5193.4 0 0 5726.3 0 0 12182 0 0 6467.4 0 0 13898 0 0 18214 0 0 6916 0 0 20934 0 0 15093 0 0 15912 0 0 5242.7 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 15694000 0 15694000 0 NaN 4887 2049 69 69 5093 5429 5781 6425 5781 6425 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8836 5781 6425 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8836 5781 6425 PhosMD_TMT_EXPT3_Cancer_SetC_NoBoost_04Sept18_Pippin_REP-18-07-03 8836