MTD mzTab-version 1.0 MTD mzTab-mode Complete MTD mzTab-type Identification MTD description BreastCancerMem_JPST000201 MTD ms_run[1]-location D:\JobRequest\ResultFiles\20190823\20190823194025297340^10.242.132.48^taba@jp\Psearch.MaxQuantExec1\BreastCancerMem_Fr3.maxqFin.txt MTD software[1] [MS, MS:1001583, MaxQuant, 1.6.2.10] MTD software[1]-setting Taxon=userFasta.sprot_human_mix_20181121 MTD software[1]-setting enzymes=Trypsin+Lys-C MTD software[1]-setting enzymeMode=0 MTD software[1]-setting fixedModifications=Carbamidomethyl (C),iTRAQ4plex (K),iTRAQ4plex (N-term) MTD software[1]-setting variableModifications=iTRAQ4plex (Y),Oxidation (M) MTD software[1]-setting maxMissedCleavages=1 MTD software[1]-setting lcmsRunType=Standard MTD software[1]-setting firstSearchTol=20 MTD software[1]-setting mainSearchTol=4.5 MTD software[2] [MS, MS:1001476, X!Tandem, 2015.04.01.1] MTD software[2]-setting DB=userFasta.sprot_human_mix_20181121 MTD software[2]-setting CLE=[R]|{P},[K]|{} MTD software[2]-setting MODS=Carbamidomethyl (C),iTRAQ4plex (K),iTRAQ4plex (N-term) MTD software[2]-setting IT_MODS=Oxidation (M),iTRAQ4plex (Y) MTD software[2]-setting TOL(-)=20 MTD software[2]-setting TOL(+)=20 MTD software[2]-setting TOLU=ppm MTD software[2]-setting ITOL=10 MTD software[2]-setting ITOLU=ppm MTD software[2]-setting PEP_ISOTOPE_ERROR=yes MTD software[2]-setting PFA=1 MTD software[3] [MS, MS:1002251, Comet, 2015.02 rev. 0] MTD software[3]-setting Taxon=userFasta.sprot_human_mix_20181121 MTD software[3]-setting search_enzyme_number=2 MTD software[3]-setting FixMod=Carbamidomethyl (C),iTRAQ4plex (K),iTRAQ4plex (N-term) MTD software[3]-setting VarMod=iTRAQ4plex (Y),Oxidation (M) MTD software[3]-setting max_variable_mods_in_peptide=5 MTD software[3]-setting allowed_missed_cleavage=1 MTD software[3]-setting peptide_mass_tolerance=20 MTD software[3]-setting peptide_mass_units=2 MTD software[3]-setting fragment_bin_tol=0.02 MTD software[3]-setting fragment_bin_offset=0.0 MTD fixed_mod[1] [UNIMOD, UNIMOD:4, Carbamidomethyl,] MTD fixed_mod[1]-site C MTD fixed_mod[1]-position Anywhere MTD fixed_mod[2] [UNIMOD, UNIMOD:214, iTRAQ4plex,] MTD fixed_mod[2]-site K MTD fixed_mod[2]-position Anywhere MTD fixed_mod[3] [UNIMOD, UNIMOD:214, iTRAQ4plex,] MTD fixed_mod[3]-site N-term MTD fixed_mod[3]-position Any N-term MTD variable_mod[1] [UNIMOD, UNIMOD:214, iTRAQ4plex,] MTD variable_mod[1]-site Y MTD variable_mod[1]-position Anywhere MTD variable_mod[2] [UNIMOD, UNIMOD:35, Oxidation,] MTD variable_mod[2]-site M MTD variable_mod[2]-position Anywhere MTD protein_search_engine_score[1] [http://rdf.jpostdb.org/ontology/jpost.owl#JpostScore] MTD psm_search_engine_score[1] [http://rdf.jpostdb.org/ontology/jpost.owl#JpostScore] PRH accession description taxid species database database_version search_engine best_search_engine_score[1] ambiguity_members modifications protein_coverage search_engine_score[1]_ms_run[1] num_psms_ms_run[1] num_peptides_distinct_ms_run[1] num_peptides_unique_ms_run[1] PRT sp|O95858|TSN15_HUMAN Tetraspanin-15 OS=Homo sapiens OX=9606 GN=TSPAN15 PE=1 SV=1 null null userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1001583, MaxQuant, ] 18.0 null 279-UNIMOD:214,288-UNIMOD:4,289-UNIMOD:4,291-UNIMOD:4 0.06 18.0 1 1 1 PSH sequence PSM_ID accession unique database database_version search_engine search_engine_score[1] modifications spectra_ref retention_time charge exp_mass_to_charge calc_mass_to_charge pre post start end PSM PSVEAAGTGCCLCYPN 1 sp|O95858|TSN15_HUMAN 1 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1001583, MaxQuant, ] 18 1-UNIMOD:214,10-UNIMOD:4,11-UNIMOD:4,13-UNIMOD:4 ms_run[1]:scan=9479 68.68 3 1898.8083 1898.8083 K - 279 295