MTD mzTab-version 1.0 MTD mzTab-mode Complete MTD mzTab-type Identification MTD description CRC_phospho_iTRAQ_JPST000204 MTD ms_run[1]-location D:\JobRequest\ResultFiles\20190823\20190823213658333178^10.242.132.48^taba@jp\PeakList.PeakListMergePreMS2_CH_1\CRC_phospho_iTRAQ_01.HCD.mqWzd.txt MTD ms_run[2]-location D:\JobRequest\ResultFiles\20190823\20190823213658333178^10.242.132.48^taba@jp\Psearch.MaxQuantExec1\CRC_phospho_iTRAQ_01.maxqFin.txt MTD software[1] [MS, MS:1001583, MaxQuant, 1.6.2.10] MTD software[1]-setting Taxon=userFasta.sprot_human_mix_20181121 MTD software[1]-setting enzymes=Trypsin/P MTD software[1]-setting enzymeMode=0 MTD software[1]-setting fixedModifications=Carbamidomethyl (C),iTRAQ4plex (K),iTRAQ4plex (N-term) MTD software[1]-setting variableModifications=iTRAQ4plex (Y),Oxidation (M),Phospho (STY) MTD software[1]-setting maxMissedCleavages=2 MTD software[1]-setting lcmsRunType=Standard MTD software[1]-setting firstSearchTol=20 MTD software[1]-setting mainSearchTol=4.5 MTD software[2] [MS, MS:1001476, X!Tandem, 2015.04.01.1] MTD software[2]-setting DB=userFasta.sprot_human_mix_20181121 MTD software[2]-setting CLE=[RK]|{} MTD software[2]-setting MODS=Carbamidomethyl (C),iTRAQ4plex (K),iTRAQ4plex (N-term) MTD software[2]-setting IT_MODS=Oxidation (M),Phospho (S),Phospho (T),Phospho (Y),iTRAQ4plex (Y) MTD software[2]-setting TOL(-)=20 MTD software[2]-setting TOL(+)=20 MTD software[2]-setting TOLU=ppm MTD software[2]-setting ITOL=5 MTD software[2]-setting ITOLU=ppm MTD software[2]-setting PEP_ISOTOPE_ERROR=yes MTD software[2]-setting PFA=2 MTD software[3] [MS, MS:1002251, Comet, 2015.02 rev. 0] MTD software[3]-setting Taxon=userFasta.sprot_human_mix_20181121 MTD software[3]-setting search_enzyme_number=2 MTD software[3]-setting FixMod=Carbamidomethyl (C),iTRAQ4plex (K),iTRAQ4plex (N-term) MTD software[3]-setting VarMod=iTRAQ4plex (Y),Oxidation (M),Phospho (S),Phospho (T),Phospho (Y) MTD software[3]-setting max_variable_mods_in_peptide=5 MTD software[3]-setting allowed_missed_cleavage=2 MTD software[3]-setting peptide_mass_tolerance=20 MTD software[3]-setting peptide_mass_units=2 MTD software[3]-setting fragment_bin_tol=0.02 MTD software[3]-setting fragment_bin_offset=0.0 MTD fixed_mod[1] [UNIMOD, UNIMOD:4, Carbamidomethyl,] MTD fixed_mod[1]-site C MTD fixed_mod[1]-position Anywhere MTD fixed_mod[2] [UNIMOD, UNIMOD:214, iTRAQ4plex,] MTD fixed_mod[2]-site K MTD fixed_mod[2]-position Anywhere MTD fixed_mod[3] [UNIMOD, UNIMOD:214, iTRAQ4plex,] MTD fixed_mod[3]-site N-term MTD fixed_mod[3]-position Any N-term MTD variable_mod[1] [UNIMOD, UNIMOD:214, iTRAQ4plex,] MTD variable_mod[1]-site Y MTD variable_mod[1]-position Anywhere MTD variable_mod[2] [UNIMOD, UNIMOD:35, Oxidation,] MTD variable_mod[2]-site M MTD variable_mod[2]-position Anywhere MTD variable_mod[3] [UNIMOD, UNIMOD:21, Phospho,] MTD variable_mod[3]-site S MTD variable_mod[3]-position Anywhere MTD variable_mod[4] [UNIMOD, UNIMOD:21, Phospho,] MTD variable_mod[4]-site T MTD variable_mod[4]-position Anywhere MTD variable_mod[5] [UNIMOD, UNIMOD:21, Phospho,] MTD variable_mod[5]-site Y MTD variable_mod[5]-position Anywhere MTD protein_search_engine_score[1] [http://rdf.jpostdb.org/ontology/jpost.owl#JpostScore] MTD psm_search_engine_score[1] [http://rdf.jpostdb.org/ontology/jpost.owl#JpostScore] PRH accession description taxid species database database_version search_engine best_search_engine_score[1] ambiguity_members modifications protein_coverage search_engine_score[1]_ms_run[1] num_psms_ms_run[1] num_peptides_distinct_ms_run[1] num_peptides_unique_ms_run[1] PRT sp|O15127|SCAM2_HUMAN Secretory carrier-associated membrane protein 2 OS=Homo sapiens OX=9606 GN=SCAMP2 PE=1 SV=2 null null userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 22.0 null 317-UNIMOD:214,320-UNIMOD:21,319-UNIMOD:21 0.04 22.0 8 1 0 PRT sp|P14625|ENPL_HUMAN Endoplasmin OS=Homo sapiens OX=9606 GN=HSP90B1 PE=1 SV=1 null null userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 19.0 null 435-UNIMOD:214 0.02 19.0 2 1 0 PRT sp|P69905|HBA_HUMAN Hemoglobin subunit alpha OS=Homo sapiens OX=9606 GN=HBA1 PE=1 SV=2 null null userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1001583, MaxQuant, ] 18.0 null 18-UNIMOD:214 0.11 18.0 1 1 1 PRT sp|P68871|HBB_HUMAN Hemoglobin subunit beta OS=Homo sapiens OX=9606 GN=HBB PE=1 SV=2 null null userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 15.0 null 134-UNIMOD:214,145-UNIMOD:214 0.09 15.0 1 1 1 PRT sp|Q9Y365|STA10_HUMAN START domain-containing protein 10 OS=Homo sapiens OX=9606 GN=STARD10 PE=1 SV=2 null null userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 14.0 null 276-UNIMOD:214,288-UNIMOD:21,276-UNIMOD:35,289-UNIMOD:21 0.06 14.0 4 1 0 PRT sp|Q13111|CAF1A_HUMAN Chromatin assembly factor 1 subunit A OS=Homo sapiens OX=9606 GN=CHAF1A PE=1 SV=3 null null userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 13.0 null 946-UNIMOD:214,951-UNIMOD:21 0.01 13.0 1 1 1 PRT sp|Q96BN8|OTUL_HUMAN Ubiquitin thioesterase otulin OS=Homo sapiens OX=9606 GN=OTULIN PE=1 SV=3 null null userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 10.0 null 346-UNIMOD:214,347-UNIMOD:4,351-UNIMOD:21 0.02 10.0 1 1 1 PRT sp|Q9BW71|HIRP3_HUMAN HIRA-interacting protein 3 OS=Homo sapiens OX=9606 GN=HIRIP3 PE=1 SV=3 null null userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 9.0 null 547-UNIMOD:214,555-UNIMOD:21 0.02 9.0 1 1 1 PSH sequence PSM_ID accession unique database database_version search_engine search_engine_score[1] modifications spectra_ref retention_time charge exp_mass_to_charge calc_mass_to_charge pre post start end PSM AASSAAQGAFQGN 1 sp|O15127|SCAM2_HUMAN 0 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 22 1-UNIMOD:214,4-UNIMOD:21 ms_run[1]:scan=4196 38.40139833333333 2 1402.600766 1402.600009 R - 317 330 PSM AASSAAQGAFQGN 2 sp|O15127|SCAM2_HUMAN 0 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 22 1-UNIMOD:214,3-UNIMOD:21 ms_run[1]:scan=4162 38.133065 3 1402.600065 1402.600009 R - 317 330 PSM AASSAAQGAFQGN 3 sp|O15127|SCAM2_HUMAN 0 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 20 1-UNIMOD:214,3-UNIMOD:21 ms_run[1]:scan=4315 39.408065 2 1402.600766 1402.600009 R - 317 330 PSM GVVDSDDLPLNVSR 4 sp|P14625|ENPL_HUMAN 0 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 19 1-UNIMOD:214 ms_run[1]:scan=9398 82.68339833333333 3 1628.849103 1628.849150 K E 435 449 PSM AASSAAQGAFQGN 5 sp|O15127|SCAM2_HUMAN 0 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 19 1-UNIMOD:214,3-UNIMOD:21 ms_run[1]:scan=4072 37.39723 2 1402.600766 1402.600009 R - 317 330 PSM VGAHAGEYGAEALER 6 sp|P69905|HBA_HUMAN 1 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1001583, MaxQuant, ] 18 1-UNIMOD:214 ms_run[2]:scan=5767 51.617 3 1672.8291 1672.8291 K M 18 33 PSM GVVDSDDLPLNVSR 7 sp|P14625|ENPL_HUMAN 0 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 17 1-UNIMOD:214 ms_run[1]:scan=9404 82.73622833333333 2 1628.849341 1628.849150 K E 435 449 PSM AASSAAQGAFQGN 8 sp|O15127|SCAM2_HUMAN 0 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 16 1-UNIMOD:214,3-UNIMOD:21 ms_run[1]:scan=4593 41.775061666666666 2 1403.584550 1402.600009 R - 317 330 PSM VVAGVANALAHK 9 sp|P68871|HBB_HUMAN 1 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 15 1-UNIMOD:214,12-UNIMOD:214 ms_run[1]:scan=8908 78.44339833333333 3 1437.873167 1436.870718 K Y 134 146 PSM AASSAAQGAFQGN 10 sp|O15127|SCAM2_HUMAN 0 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 15 1-UNIMOD:214,4-UNIMOD:21 ms_run[1]:scan=4715 42.800396666666664 2 1403.584574 1402.600009 R - 317 330 PSM MGGAGGEGSDDDTSLT 11 sp|Q9Y365|STA10_HUMAN 0 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 14 1-UNIMOD:214,13-UNIMOD:21 ms_run[1]:scan=5058 45.659061666666666 2 1692.630827 1692.630776 R - 276 292 PSM AASSAAQGAFQGN 12 sp|O15127|SCAM2_HUMAN 0 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 14 1-UNIMOD:214,3-UNIMOD:21 ms_run[1]:scan=4889 44.249895 2 1403.584428 1402.600009 R - 317 330 PSM ATLTASPLGAS 13 sp|Q13111|CAF1A_HUMAN 1 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 13 1-UNIMOD:214,6-UNIMOD:21 ms_run[1]:scan=6931 61.52057166666667 2 1211.592824 1211.592070 K - 946 957 PSM AASSAAQGAFQGN 14 sp|O15127|SCAM2_HUMAN 0 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 12 1-UNIMOD:214,3-UNIMOD:21 ms_run[1]:scan=4436 40.43423166666666 2 1402.600766 1402.600009 R - 317 330 PSM MGGAGGEGSDDDTSLT 15 sp|Q9Y365|STA10_HUMAN 0 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 11 1-UNIMOD:214,13-UNIMOD:21 ms_run[1]:scan=4937 44.646735 2 1692.630827 1692.630776 R - 276 292 PSM MGGAGGEGSDDDTSLT 16 sp|Q9Y365|STA10_HUMAN 0 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 10 1-UNIMOD:214,1-UNIMOD:35,13-UNIMOD:21 ms_run[1]:scan=2923 27.164063333333335 2 1708.625556 1708.625691 R - 276 292 PSM VCEETSL 17 sp|Q96BN8|OTUL_HUMAN 1 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 10 1-UNIMOD:214,2-UNIMOD:4,6-UNIMOD:21 ms_run[1]:scan=5059 45.66829 2 1060.426308 1060.426978 R - 346 353 PSM MGGAGGEGSDDDTSLT 18 sp|Q9Y365|STA10_HUMAN 0 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 9 1-UNIMOD:214,14-UNIMOD:21 ms_run[1]:scan=4813 43.630235 2 1692.630599 1692.630776 R - 276 292 PSM GIISSDGESN 19 sp|Q9BW71|HIRP3_HUMAN 1 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 9 1-UNIMOD:214,9-UNIMOD:21 ms_run[1]:scan=3592 33.13706166666666 2 1201.498718 1201.498563 R - 547 557