MTD mzTab-version 1.0 MTD mzTab-mode Complete MTD mzTab-type Identification MTD description CRC_phospho_iTRAQ_JPST000204 MTD ms_run[1]-location D:\JobRequest\ResultFiles\20190823\20190823213658333178^10.242.132.48^taba@jp\PeakList.PeakListMergePreMS2_CH_1\CRC_phospho_iTRAQ_02.HCD.mqWzd.txt MTD ms_run[2]-location D:\JobRequest\ResultFiles\20190823\20190823213658333178^10.242.132.48^taba@jp\Psearch.MaxQuantExec1\CRC_phospho_iTRAQ_02.maxqFin.txt MTD software[1] [MS, MS:1001583, MaxQuant, 1.6.2.10] MTD software[1]-setting Taxon=userFasta.sprot_human_mix_20181121 MTD software[1]-setting enzymes=Trypsin/P MTD software[1]-setting enzymeMode=0 MTD software[1]-setting fixedModifications=Carbamidomethyl (C),iTRAQ4plex (K),iTRAQ4plex (N-term) MTD software[1]-setting variableModifications=iTRAQ4plex (Y),Oxidation (M),Phospho (STY) MTD software[1]-setting maxMissedCleavages=2 MTD software[1]-setting lcmsRunType=Standard MTD software[1]-setting firstSearchTol=20 MTD software[1]-setting mainSearchTol=4.5 MTD software[2] [MS, MS:1001476, X!Tandem, 2015.04.01.1] MTD software[2]-setting DB=userFasta.sprot_human_mix_20181121 MTD software[2]-setting CLE=[RK]|{} MTD software[2]-setting MODS=Carbamidomethyl (C),iTRAQ4plex (K),iTRAQ4plex (N-term) MTD software[2]-setting IT_MODS=Oxidation (M),Phospho (S),Phospho (T),Phospho (Y),iTRAQ4plex (Y) MTD software[2]-setting TOL(-)=20 MTD software[2]-setting TOL(+)=20 MTD software[2]-setting TOLU=ppm MTD software[2]-setting ITOL=5 MTD software[2]-setting ITOLU=ppm MTD software[2]-setting PEP_ISOTOPE_ERROR=yes MTD software[2]-setting PFA=2 MTD software[3] [MS, MS:1002251, Comet, 2015.02 rev. 0] MTD software[3]-setting Taxon=userFasta.sprot_human_mix_20181121 MTD software[3]-setting search_enzyme_number=2 MTD software[3]-setting FixMod=Carbamidomethyl (C),iTRAQ4plex (K),iTRAQ4plex (N-term) MTD software[3]-setting VarMod=iTRAQ4plex (Y),Oxidation (M),Phospho (S),Phospho (T),Phospho (Y) MTD software[3]-setting max_variable_mods_in_peptide=5 MTD software[3]-setting allowed_missed_cleavage=2 MTD software[3]-setting peptide_mass_tolerance=20 MTD software[3]-setting peptide_mass_units=2 MTD software[3]-setting fragment_bin_tol=0.02 MTD software[3]-setting fragment_bin_offset=0.0 MTD fixed_mod[1] [UNIMOD, UNIMOD:4, Carbamidomethyl,] MTD fixed_mod[1]-site C MTD fixed_mod[1]-position Anywhere MTD fixed_mod[2] [UNIMOD, UNIMOD:214, iTRAQ4plex,] MTD fixed_mod[2]-site K MTD fixed_mod[2]-position Anywhere MTD fixed_mod[3] [UNIMOD, UNIMOD:214, iTRAQ4plex,] MTD fixed_mod[3]-site N-term MTD fixed_mod[3]-position Any N-term MTD variable_mod[1] [UNIMOD, UNIMOD:214, iTRAQ4plex,] MTD variable_mod[1]-site Y MTD variable_mod[1]-position Anywhere MTD variable_mod[2] [UNIMOD, UNIMOD:35, Oxidation,] MTD variable_mod[2]-site M MTD variable_mod[2]-position Anywhere MTD variable_mod[3] [UNIMOD, UNIMOD:21, Phospho,] MTD variable_mod[3]-site S MTD variable_mod[3]-position Anywhere MTD variable_mod[4] [UNIMOD, UNIMOD:21, Phospho,] MTD variable_mod[4]-site T MTD variable_mod[4]-position Anywhere MTD variable_mod[5] [UNIMOD, UNIMOD:21, Phospho,] MTD variable_mod[5]-site Y MTD variable_mod[5]-position Anywhere MTD protein_search_engine_score[1] [http://rdf.jpostdb.org/ontology/jpost.owl#JpostScore] MTD psm_search_engine_score[1] [http://rdf.jpostdb.org/ontology/jpost.owl#JpostScore] PRH accession description taxid species database database_version search_engine best_search_engine_score[1] ambiguity_members modifications protein_coverage search_engine_score[1]_ms_run[1] num_psms_ms_run[1] num_peptides_distinct_ms_run[1] num_peptides_unique_ms_run[1] PRT sp|O15127|SCAM2_HUMAN Secretory carrier-associated membrane protein 2 OS=Homo sapiens OX=9606 GN=SCAMP2 PE=1 SV=2 null null userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 20.0 null 317-UNIMOD:214,319-UNIMOD:21,320-UNIMOD:21 0.04 20.0 5 1 0 PRT sp|P69905|HBA_HUMAN Hemoglobin subunit alpha OS=Homo sapiens OX=9606 GN=HBA1 PE=1 SV=2 null null userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 16.0 null 18-UNIMOD:214 0.11 16.0 1 1 1 PRT sp|Q06210-2|GFPT1_HUMAN Isoform 2 of Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Homo sapiens OX=9606 GN=GFPT1 null null userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1001583, MaxQuant, ] 14.0 null 241-UNIMOD:214,243-UNIMOD:21,246-UNIMOD:4,253-UNIMOD:214 0.02 14.0 1 1 1 PRT sp|P26038|MOES_HUMAN Moesin OS=Homo sapiens OX=9606 GN=MSN PE=1 SV=3 null null userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 10.0 null 571-UNIMOD:214,576-UNIMOD:21,577-UNIMOD:35 0.01 10.0 1 1 1 PRT sp|P33992|MCM5_HUMAN DNA replication licensing factor MCM5 OS=Homo sapiens OX=9606 GN=MCM5 PE=1 SV=5 null null userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 10.0 null 604-UNIMOD:214,604-UNIMOD:21,605-UNIMOD:21 0.01 10.0 1 1 1 PRT sp|P14625|ENPL_HUMAN Endoplasmin OS=Homo sapiens OX=9606 GN=HSP90B1 PE=1 SV=1 null null userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 9.0 null 435-UNIMOD:214 0.02 9.0 1 1 1 PRT sp|P61247|RS3A_HUMAN 40S ribosomal protein S3a OS=Homo sapiens OX=9606 GN=RPS3A PE=1 SV=2 null null userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 9.0 null 253-UNIMOD:214,263-UNIMOD:21 0.05 9.0 1 1 1 PRT sp|Q9Y365|STA10_HUMAN START domain-containing protein 10 OS=Homo sapiens OX=9606 GN=STARD10 PE=1 SV=2 null null userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 9.0 null 276-UNIMOD:214,276-UNIMOD:35,291-UNIMOD:21 0.06 9.0 1 1 1 PRT sp|P38432|COIL_HUMAN Coilin OS=Homo sapiens OX=9606 GN=COIL PE=1 SV=1 null null userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 9.0 null 562-UNIMOD:214,566-UNIMOD:21 0.03 9.0 1 1 1 PSH sequence PSM_ID accession unique database database_version search_engine search_engine_score[1] modifications spectra_ref retention_time charge exp_mass_to_charge calc_mass_to_charge pre post start end PSM AASSAAQGAFQGN 1 sp|O15127|SCAM2_HUMAN 0 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 20 1-UNIMOD:214,3-UNIMOD:21 ms_run[1]:scan=4488 38.96592166666667 2 1402.600274 1402.600009 R - 317 330 PSM AASSAAQGAFQGN 2 sp|O15127|SCAM2_HUMAN 0 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 19 1-UNIMOD:214,4-UNIMOD:21 ms_run[1]:scan=4362 37.953755 2 1402.600274 1402.600009 R - 317 330 PSM AASSAAQGAFQGN 3 sp|O15127|SCAM2_HUMAN 0 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 19 1-UNIMOD:214,3-UNIMOD:21 ms_run[1]:scan=4845 41.83943 2 1403.584051 1402.600009 R - 317 330 PSM AASSAAQGAFQGN 4 sp|O15127|SCAM2_HUMAN 0 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 18 1-UNIMOD:214,3-UNIMOD:21 ms_run[1]:scan=4972 42.84559 2 1403.584016 1402.600009 R - 317 330 PSM AASSAAQGAFQGN 5 sp|O15127|SCAM2_HUMAN 0 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 18 1-UNIMOD:214,3-UNIMOD:21 ms_run[1]:scan=5169 44.38209166666667 2 1403.583514 1402.600009 R - 317 330 PSM VGAHAGEYGAEALER 6 sp|P69905|HBA_HUMAN 1 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 16 1-UNIMOD:214 ms_run[1]:scan=6145 52.06375666666666 3 1673.832128 1672.829083 K M 18 33 PSM VDSTTCLFPVEEK 7 sp|Q06210-2|GFPT1_HUMAN 1 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1001583, MaxQuant, ] 14 1-UNIMOD:214,3-UNIMOD:21,6-UNIMOD:4,13-UNIMOD:214 ms_run[2]:scan=11397 94.399 3 1891.8882 1891.8882 R A 241 254 PSM IDEFESM 8 sp|P26038|MOES_HUMAN 1 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 10 1-UNIMOD:214,6-UNIMOD:21,7-UNIMOD:35 ms_run[1]:scan=6609 55.77592333333333 2 1109.410303 1109.410994 R - 571 578 PSM SSIPITVR 9 sp|P33992|MCM5_HUMAN 1 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 10 1-UNIMOD:214,1-UNIMOD:21,2-UNIMOD:21 ms_run[1]:scan=9213 76.70742333333332 2 1177.574860 1175.547442 R Q 604 612 PSM GVVDSDDLPLNVSR 10 sp|P14625|ENPL_HUMAN 1 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 9 1-UNIMOD:214 ms_run[1]:scan=10004 83.136335 2 1628.849014 1628.849150 K E 435 449 PSM ADGYEPPVQESV 11 sp|P61247|RS3A_HUMAN 1 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 9 1-UNIMOD:214,11-UNIMOD:21 ms_run[1]:scan=7405 62.154421666666664 2 1513.646533 1513.645956 R - 253 265 PSM MGGAGGEGSDDDTSLT 12 sp|Q9Y365|STA10_HUMAN 1 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 9 1-UNIMOD:214,1-UNIMOD:35,16-UNIMOD:21 ms_run[1]:scan=2612 23.533255 3 1708.625187 1708.625691 R - 276 292 PSM LIIESPSNTSSTEPA 13 sp|P38432|COIL_HUMAN 1 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 9 1-UNIMOD:214,5-UNIMOD:21 ms_run[1]:scan=9590 79.77508833333333 2 1768.826437 1768.825377 R - 562 577