MTD mzTab-version 1.0 MTD mzTab-mode Complete MTD mzTab-type Identification MTD description CRC_phospho_iTRAQ_JPST000204 MTD ms_run[1]-location D:\JobRequest\ResultFiles\20190823\20190823213658333178^10.242.132.48^taba@jp\PeakList.PeakListMergePreMS2_CH_1\CRC_phospho_iTRAQ_03.CID.mqWzd.txt MTD ms_run[2]-location D:\JobRequest\ResultFiles\20190823\20190823213658333178^10.242.132.48^taba@jp\Psearch.MaxQuantExec1\CRC_phospho_iTRAQ_03.maxqFin.txt MTD software[1] [MS, MS:1001583, MaxQuant, ] MTD software[1]-setting Taxon=userFasta.sprot_human_mix_20181121 MTD software[1]-setting enzymes=Trypsin/P MTD software[1]-setting enzymeMode=0 MTD software[1]-setting fixedModifications=Carbamidomethyl (C),iTRAQ4plex (K),iTRAQ4plex (N-term) MTD software[1]-setting variableModifications=iTRAQ4plex (Y),Oxidation (M),Phospho (STY) MTD software[1]-setting maxMissedCleavages=2 MTD software[1]-setting lcmsRunType=Standard MTD software[1]-setting firstSearchTol=20 MTD software[1]-setting mainSearchTol=4.5 MTD software[2] [MS, MS:1001476, X!Tandem, 2015.04.01.1] MTD software[2]-setting DB=userFasta.sprot_human_mix_20181121 MTD software[2]-setting CLE=[RK]|{} MTD software[2]-setting MODS=Carbamidomethyl (C),iTRAQ4plex (K),iTRAQ4plex (N-term) MTD software[2]-setting IT_MODS=Oxidation (M),Phospho (S),Phospho (T),Phospho (Y),iTRAQ4plex (Y) MTD software[2]-setting TOL(-)=20 MTD software[2]-setting TOL(+)=20 MTD software[2]-setting TOLU=ppm MTD software[2]-setting ITOL=0.1 MTD software[2]-setting ITOLU=Daltons MTD software[2]-setting PEP_ISOTOPE_ERROR=yes MTD software[2]-setting PFA=2 MTD software[3] [MS, MS:1002251, Comet, 2015.02 rev. 0] MTD software[3]-setting Taxon=userFasta.sprot_human_mix_20181121 MTD software[3]-setting search_enzyme_number=2 MTD software[3]-setting FixMod=Carbamidomethyl (C),iTRAQ4plex (K),iTRAQ4plex (N-term) MTD software[3]-setting VarMod=iTRAQ4plex (Y),Oxidation (M),Phospho (S),Phospho (T),Phospho (Y) MTD software[3]-setting max_variable_mods_in_peptide=5 MTD software[3]-setting allowed_missed_cleavage=2 MTD software[3]-setting peptide_mass_tolerance=20 MTD software[3]-setting peptide_mass_units=2 MTD software[3]-setting fragment_bin_tol=1.0005 MTD software[3]-setting fragment_bin_offset=0.4 MTD fixed_mod[1] [UNIMOD, UNIMOD:4, Carbamidomethyl,] MTD fixed_mod[1]-site C MTD fixed_mod[1]-position Anywhere MTD fixed_mod[2] [UNIMOD, UNIMOD:214, iTRAQ4plex,] MTD fixed_mod[2]-site K MTD fixed_mod[2]-position Anywhere MTD fixed_mod[3] [UNIMOD, UNIMOD:214, iTRAQ4plex,] MTD fixed_mod[3]-site N-term MTD fixed_mod[3]-position Any N-term MTD variable_mod[1] [UNIMOD, UNIMOD:214, iTRAQ4plex,] MTD variable_mod[1]-site Y MTD variable_mod[1]-position Anywhere MTD variable_mod[2] [UNIMOD, UNIMOD:35, Oxidation,] MTD variable_mod[2]-site M MTD variable_mod[2]-position Anywhere MTD variable_mod[3] [UNIMOD, UNIMOD:21, Phospho,] MTD variable_mod[3]-site S MTD variable_mod[3]-position Anywhere MTD variable_mod[4] [UNIMOD, UNIMOD:21, Phospho,] MTD variable_mod[4]-site T MTD variable_mod[4]-position Anywhere MTD variable_mod[5] [UNIMOD, UNIMOD:21, Phospho,] MTD variable_mod[5]-site Y MTD variable_mod[5]-position Anywhere MTD protein_search_engine_score[1] [http://rdf.jpostdb.org/ontology/jpost.owl#JpostScore] MTD psm_search_engine_score[1] [http://rdf.jpostdb.org/ontology/jpost.owl#JpostScore] PRH accession description taxid species database database_version search_engine best_search_engine_score[1] ambiguity_members modifications protein_coverage search_engine_score[1]_ms_run[1] num_psms_ms_run[1] num_peptides_distinct_ms_run[1] num_peptides_unique_ms_run[1] PRT sp|P68871|HBB_HUMAN Hemoglobin subunit beta OS=Homo sapiens OX=9606 GN=HBB PE=1 SV=2 null null userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1001583, MaxQuant, ] 32.0 null 42-UNIMOD:214,56-UNIMOD:35,60-UNIMOD:214 0.14 32.0 1 1 1 PRT sp|P14625|ENPL_HUMAN Endoplasmin OS=Homo sapiens OX=9606 GN=HSP90B1 PE=1 SV=1 null null userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 30.0 null 435-UNIMOD:214 0.02 30.0 1 1 1 PSH sequence PSM_ID accession unique database database_version search_engine search_engine_score[1] modifications spectra_ref retention_time charge exp_mass_to_charge calc_mass_to_charge pre post start end PSM FFESFGDLSTPDAVMGNPK 1 sp|P68871|HBB_HUMAN 1 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1001583, MaxQuant, ] 32 1-UNIMOD:214,15-UNIMOD:35,19-UNIMOD:214 ms_run[2]:scan=17766 155.26 3 2362.1395 2362.1395 R V 42 61 PSM GVVDSDDLPLNVSR 2 sp|P14625|ENPL_HUMAN 1 userFasta.sprot_human_mix_20181121 userFasta.sprot_human_mix_20181121 [MS, MS:1002251, Comet, ] 30 1-UNIMOD:214 ms_run[1]:scan=16197 142.02626 2 1628.849731 1628.849150 K E 435 449