Raw file Experiment Fraction Enzyme Enzyme mode Enzyme first search Enzyme mode first search Use enzyme first search Variable modifications Fixed modifications Multi modifications Variable modifications first search Use variable modifications first search Requantify Multiplicity Max. missed cleavages Labels0 LC-MS run type Time-dependent recalibration MS MS/MS MS3 MS/MS Submitted MS/MS Submitted (SIL) MS/MS Submitted (ISO) MS/MS Submitted (PEAK) MS/MS Identified MS/MS Identified (SIL) MS/MS Identified (ISO) MS/MS Identified (PEAK) MS/MS Identified [%] MS/MS Identified (SIL) [%] MS/MS Identified (ISO) [%] MS/MS Identified (PEAK) [%] Peptide Sequences Identified Peaks Peaks Sequenced Peaks Sequenced [%] Peaks Repeatedly Sequenced Peaks Repeatedly Sequenced [%] Isotope Patterns Isotope Patterns Sequenced Isotope Patterns Sequenced (z>1) Isotope Patterns Sequenced [%] Isotope Patterns Sequenced (z>1) [%] Isotope Patterns Repeatedly Sequenced Isotope Patterns Repeatedly Sequenced [%] Recalibrated Av. Absolute Mass Deviation [ppm] Mass Standard Deviation [ppm] Av. Absolute Mass Deviation [mDa] Mass Standard Deviation [mDa] Label free norm param 170214_C17_008_QHF_FH_Rev04_#17_007_SER11_1 SER11 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 25671 32106 0 45690 18414 0 27276 1492 1427 0 65 3.3 7.7 0 0.24 850 1531424 25072 1.6 1780 7.1 111712 15233 14069 14 27 1805 12 + 0.73943 1.043 0.53072 0.78715 170214_C17_008_QHF_FH_Rev04_#17_007_SER11_2 SER11 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 14580 84012 0 100535 67463 0 33072 30874 30024 0 850 31 45 0 2.6 19003 1253829 72375 5.8 6262 8.7 168829 55817 54330 33 40 9443 17 + 0.69368 0.99392 0.50324 0.76724 170214_C17_008_QHF_FH_Rev04_#17_007_SER11_3 SER11 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 15017 81322 0 97800 64780 0 33020 24308 23976 0 332 25 37 0 1 13726 1255706 70563 5.6 5562 7.9 159903 53775 52979 34 38 9108 17 + 0.58697 0.85255 0.38727 0.60118 170214_C17_008_QHF_FH_Rev04_#17_007_SER12_1 SER12 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 26861 24731 0 36990 12310 0 24680 1094 1014 0 80 3 8.2 0 0.32 577 1656227 18212 1.1 1037 5.7 114097 10315 9400 9 25 1166 11 + 0.77785 1.0782 0.54599 0.79505 170214_C17_008_QHF_FH_Rev04_#17_007_SER12_2 SER12 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 22828 46170 0 68790 23132 0 45658 3003 2946 0 57 4.4 13 0 0.12 1276 1394333 34116 2.4 3166 9.3 98791 17414 16733 18 27 3706 21 + 0.80635 1.0917 0.7537 1.0823 170214_C17_008_QHF_FH_Rev04_#17_007_SER12_3 SER12 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 15353 79922 0 97179 62613 0 34566 20773 20472 0 301 21 33 0 0.87 11055 1268281 68538 5.4 5790 8.4 155594 51230 50196 33 39 9162 18 + 0.57099 0.83651 0.36532 0.56369 170214_C17_008_QHF_FH_Rev04_#17_007_SER13_1 SER13 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 26796 25361 0 37358 13194 0 24164 1194 1110 0 84 3.2 8.4 0 0.35 670 1741321 19049 1.1 1144 6 127429 11025 10216 8.7 26 1276 12 + 0.83206 1.1231 0.61697 0.87793 170214_C17_008_QHF_FH_Rev04_#17_007_SER13_2 SER13 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 15541 80035 0 97076 62972 0 34104 22731 22175 0 556 23 35 0 1.6 13688 1314646 68176 5.2 6330 9.3 164463 51431 49852 31 39 9238 18 + 0.68701 0.98076 0.50063 0.76729 170214_C17_008_QHF_FH_Rev04_#17_007_SER13_3 SER13 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 14022 85376 0 102718 67990 0 34728 27687 27139 0 548 27 40 0 1.6 14344 1269602 74092 5.8 5791 7.8 167565 56460 55434 34 39 9444 17 + 0.62124 0.90436 0.43355 0.67075 170214_C17_008_QHF_FH_Rev04_#17_007_SER14_1 SER14 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 26370 27532 0 40954 13938 0 27016 1065 1033 0 32 2.6 7.4 0 0.12 660 1687841 20846 1.2 1096 5.3 124330 11960 11095 9.6 26 1284 11 + 0.85468 1.1731 0.59628 0.86036 170214_C17_008_QHF_FH_Rev04_#17_007_SER14_2 SER14 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 15212 81169 0 98781 63523 0 35258 24524 23998 0 526 25 38 0 1.5 14297 1271300 68952 5.4 6256 9.1 160053 51759 50138 32 40 9212 18 + 0.68126 0.97548 0.50033 0.77273 170214_C17_008_QHF_FH_Rev04_#17_007_SER14_3 SER14 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 15136 81402 0 98599 64155 0 34444 24588 24149 0 439 25 38 0 1.3 12719 1270897 69779 5.5 5917 8.5 158625 52575 51610 33 38 9323 18 + 0.61334 0.88671 0.41962 0.64768 170214_C17_008_QHF_FH_Rev04_#17_007_SER15_1 SER15 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 26215 28537 0 42008 14916 0 27092 1219 1152 0 67 2.9 7.7 0 0.25 686 1535159 21536 1.4 1330 6.2 102601 12379 11499 12 27 1378 11 + 0.81065 1.1172 0.60748 0.88027 170214_C17_008_QHF_FH_Rev04_#17_007_SER15_2 SER15 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 17376 72012 0 89255 54657 0 34598 13978 13767 0 211 16 25 0 0.61 8864 1263839 60441 4.8 5765 9.5 138617 44366 43269 32 39 8179 18 + 0.65571 0.94167 0.46917 0.73363 170214_C17_008_QHF_FH_Rev04_#17_007_SER15_3 SER15 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 16371 76498 0 93139 59807 0 33332 19555 19296 0 259 21 32 0 0.78 10883 1295616 65351 5 5772 8.8 154603 49024 48132 32 37 8704 18 + 0.56105 0.81978 0.3581 0.55576 170214_C17_008_QHF_PTM_Rev01_#17_007_SER1 SER1 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5579 23356 0 25184 21528 0 3656 12778 12401 0 377 51 58 0 10 11042 703560 21980 3.1 624 2.8 116127 20212 19946 17 23 829 4.1 + 0.35524 0.56869 0.22259 0.36436 170214_C17_008_QHF_PTM_Rev01_#17_007_SER2 SER2 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6584 20026 0 21778 18274 0 3504 9713 9387 0 326 45 51 0 9.3 8169 711316 18720 2.6 609 3.3 102063 17002 16744 17 23 756 4.4 + 0.33609 0.53317 0.20199 0.32658 170214_C17_008_QHF_PTM_Rev01_#17_007_SER3 SER3 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6069 21784 0 23554 20014 0 3540 12178 11837 0 341 52 59 0 9.6 10662 699684 20678 3 478 2.3 109193 18957 18720 17 23 688 3.6 + 0.34973 0.56302 0.21277 0.3513 170214_C17_008_QHF_PTM_Rev01_#17_007_SER4 SER4 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5493 22784 0 24759 20809 0 3950 11298 10933 0 365 46 53 0 9.2 9247 648327 21360 3.3 710 3.3 106930 19429 19129 18 24 978 5 + 0.36197 0.56074 0.22843 0.36453 170214_C17_008_QHF_PTM_Rev01_#17_007_SER5 SER5 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5966 22610 0 24254 20966 0 3288 12854 12466 0 388 53 59 0 12 11310 713568 21465 3 513 2.4 113591 19837 19590 17 22 703 3.5 + 0.35284 0.57102 0.21731 0.36059 170214_C17_008_QHF_PTM_Rev01_#17_007_SER6 SER6 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6363 21119 0 22744 19494 0 3250 11818 11463 0 355 52 59 0 11 10342 714845 20033 2.8 495 2.5 108924 18445 18214 17 22 655 3.6 + 0.34805 0.5718 0.21095 0.35432 170214_C17_008_QHF_PTM_Rev01_#17_007_SER7 SER7 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6754 19554 0 21118 17990 0 3128 10236 9951 0 285 48 55 0 9.1 8719 715843 18459 2.6 501 2.7 102882 16872 16642 16 22 629 3.7 + 0.34554 0.55712 0.20645 0.34216 170214_C17_008_QHF_PTM_Rev01_#17_007_SER8 SER8 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5525 22537 0 24316 20758 0 3558 11873 11523 0 350 49 56 0 9.8 10059 650419 21151 3.3 642 3 105721 19432 19172 18 24 878 4.5 + 0.3483 0.55317 0.21657 0.35141 170214_C17_008_QHF_PTM_Rev01_#17_007_SER9 SER9 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6451 20537 0 22202 18872 0 3330 11069 10735 0 334 50 57 0 10 9628 729833 19429 2.7 543 2.8 107738 17735 17507 16 22 710 4 + 0.35572 0.56144 0.21385 0.34638 170214_C17_008_QHF_PTM_Rev01_#17_007_SER10 SER10 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5654 21192 0 23741 18643 0 5098 9801 9432 0 369 41 51 0 7.2 7503 619593 18626 3 1194 6.4 90582 15983 15657 18 24 1434 9 + 0.3537 0.57352 0.21435 0.35247 170217_C17_011_QHF_FH_Rev04_#17_009_SER26_1 SER26 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 27437 23001 0 33738 12136 0 21602 1241 1137 0 104 3.7 9.4 0 0.48 594 1621665 17739 1.1 798 4.5 116941 10549 9736 9 24 1009 9.6 + 0.7605 1.0251 0.52968 0.73805 170217_C17_011_QHF_FH_Rev04_#17_009_SER26_2 SER26 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 18646 68125 0 83696 52510 0 31186 19147 18530 0 617 23 35 0 2 11495 1275907 56113 4.4 6311 11 136988 41717 40577 30 38 8234 20 + 0.60342 0.86995 0.39181 0.61174 170217_C17_011_QHF_FH_Rev04_#17_009_SER26_3 SER26 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 17510 73127 0 87796 58432 0 29364 22208 21903 0 305 25 37 0 1 12218 1328111 63024 4.7 5423 8.6 155517 48486 47666 31 37 8223 17 + 0.53314 0.78196 0.3247 0.50587 170217_C17_011_QHF_FH_Rev04_#17_009_SER27_1 SER27 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 26469 28340 0 41924 14614 0 27310 1238 1140 0 98 3 7.8 0 0.36 717 1933098 21672 1.1 1398 6.5 139713 12387 11294 8.9 23 1665 13 + 0.91996 1.2369 0.64746 0.92677 170217_C17_011_QHF_FH_Rev04_#17_009_SER27_2 SER27 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 18625 68668 0 85471 51807 0 33664 22410 21681 0 729 26 42 0 2.2 12754 1273203 55040 4.3 6820 12 135417 40262 39148 30 38 8402 21 + 0.60733 0.87296 0.39841 0.62496 170217_C17_011_QHF_FH_Rev04_#17_009_SER27_3 SER27 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 18510 68526 0 83517 53489 0 30028 19959 19604 0 355 24 37 0 1.2 11343 1294600 58034 4.5 5383 9.3 141185 43972 43190 31 37 7864 18 + 0.52171 0.7737 0.30502 0.48102 170217_C17_011_QHF_FH_Rev04_#17_009_SER28_1 SER28 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 26688 27510 0 40347 14473 0 25874 842 761 0 81 2.1 5.3 0 0.31 513 1796370 21077 1.2 1417 6.7 123103 12170 11128 9.9 23 1652 14 + 0.87011 1.1933 0.61716 0.89728 170217_C17_011_QHF_FH_Rev04_#17_009_SER28_2 SER28 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 21735 56778 0 73786 39738 0 34048 14054 13101 0 953 19 33 0 2.8 6538 1583929 42872 2.7 5732 13 144181 29625 28482 21 26 5629 19 + 0.61912 0.89917 0.38713 0.61103 170217_C17_011_QHF_FH_Rev04_#17_009_SER28_3 SER28 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 17384 73300 0 87966 58574 0 29392 22479 22147 0 332 26 38 0 1.1 12461 1322437 62764 4.7 5763 9.2 150953 48023 47280 32 38 8739 18 + 0.53309 0.78419 0.32474 0.50781 170217_C17_011_QHF_FH_Rev04_#17_009_SER29_1 SER29 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 27680 21709 0 31760 11558 0 20202 914 815 0 99 2.9 7.1 0 0.49 498 1629571 16691 1 980 5.9 109957 9915 9033 9 23 1155 12 + 0.83286 1.1521 0.59702 0.86618 170217_C17_011_QHF_FH_Rev04_#17_009_SER29_2 SER29 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 18995 66620 0 82272 50896 0 31376 19685 19091 0 594 24 38 0 1.9 11410 1259348 53839 4.3 6946 13 128111 39104 38073 31 38 8871 23 + 0.60833 0.87075 0.39736 0.61237 170217_C17_011_QHF_FH_Rev04_#17_009_SER29_3 SER29 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 17546 72546 0 88669 56359 0 32310 19609 19350 0 259 22 34 0 0.8 10877 1368148 61471 4.5 5894 9.6 151903 45511 44769 30 35 8870 19 + 0.55112 0.81325 0.33838 0.52986 170217_C17_011_QHF_FH_Rev04_#17_009_SER30_1 SER30 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 27959 20607 0 30424 10668 0 19756 1192 1063 0 129 3.9 10 0 0.65 561 1609976 15538 0.97 929 6 103115 8836 8148 8.6 23 1028 12 + 0.90801 1.2229 0.61506 0.86487 170217_C17_011_QHF_FH_Rev04_#17_009_SER30_2 SER30 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 18424 69036 0 85782 52234 0 33548 20000 19767 0 233 23 38 0 0.69 12182 1284456 56877 4.4 6317 11 142588 41720 40593 29 36 8277 20 + 0.62284 0.89885 0.39543 0.61106 170217_C17_011_QHF_FH_Rev04_#17_009_SER30_3 SER30 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 17475 72744 0 89221 56225 0 32996 22250 21885 0 365 25 39 0 1.1 12297 1335844 61600 4.6 5741 9.3 154230 45950 45245 30 35 8526 19 + 0.5381 0.78825 0.31753 0.48958 170217_C17_011_QHF_PTM_Rev01_#17_009_SER17 SER17 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5909 21333 0 23263 19403 0 3860 10330 9994 0 336 44 52 0 8.7 9228 780722 20382 2.6 411 2 113132 18577 18297 16 23 631 3.4 + 0.3553 0.57075 0.21272 0.34969 170217_C17_011_QHF_PTM_Rev01_#17_009_SER18 SER18 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6117 21219 0 22874 19564 0 3310 11286 11057 0 229 49 57 0 6.9 10238 804007 20459 2.5 339 1.7 120258 18886 18610 16 22 513 2.7 + 0.3527 0.55974 0.20958 0.33794 170217_C17_011_QHF_PTM_Rev01_#17_009_SER19 SER19 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5346 24285 0 25897 22673 0 3224 13603 13237 0 366 53 58 0 11 12349 793237 23493 3 351 1.5 131307 21992 21725 17 21 512 2.3 + 0.36002 0.57349 0.22052 0.35738 170217_C17_011_QHF_PTM_Rev01_#17_009_SER20 SER20 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6354 21154 0 22916 19392 0 3524 11410 11080 0 330 50 57 0 9.4 10264 791148 20287 2.6 380 1.9 117942 18644 18378 16 21 535 2.9 + 0.35383 0.57005 0.20841 0.34247 170217_C17_011_QHF_PTM_Rev01_#17_009_SER21 SER21 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6232 20863 0 22678 19048 0 3630 10469 10135 0 334 46 53 0 9.2 9230 814608 19912 2.4 461 2.3 115982 18146 17848 16 22 640 3.5 + 0.35447 0.56888 0.20956 0.3423 170217_C17_011_QHF_PTM_Rev01_#17_009_SER23 SER23 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5432 24474 0 26188 22760 0 3428 13594 13179 0 415 52 58 0 12 12388 794049 23627 3 380 1.6 132766 21978 21722 17 21 596 2.7 + 0.36141 0.5758 0.22139 0.35981 170217_C17_011_QHF_PTM_Rev01_#17_009_SER24 SER24 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5929 22149 0 23896 20402 0 3494 11489 11107 0 382 48 54 0 11 10168 716358 21189 3 447 2.1 110601 19517 19235 18 23 634 3.2 + 0.35498 0.56821 0.21311 0.34916 170217_C17_011_QHF_PTM_Rev01_#17_009_SER25 SER25 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6801 19645 0 21347 17943 0 3404 10365 9963 0 402 49 56 0 12 9357 804819 18760 2.3 401 2.1 111720 17103 16854 15 21 555 3.2 + 0.35234 0.56237 0.20472 0.32965 170302_C17_011_QHF_FH_Rev04_#17_012_SER41_1 SER41 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 27696 22216 0 32327 11977 0 20350 1194 1078 0 116 3.7 9 0 0.57 602 1733787 16832 0.97 1090 6.5 109198 9748 8949 8.9 23 1213 12 + 0.82745 1.1121 0.55215 0.76707 170302_C17_011_QHF_FH_Rev04_#17_012_SER41_2 SER41 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 17696 72456 0 87846 57046 0 30800 26099 25076 0 1023 30 44 0 3.3 15185 1202498 60044 5 7036 12 136384 44615 43473 33 40 9588 21 + 0.64886 0.92337 0.4478 0.68457 170302_C17_011_QHF_FH_Rev04_#17_012_SER41_3 SER41 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 16908 76197 0 90787 61595 0 29192 32053 31161 0 892 35 51 0 3.1 16795 1250863 64899 5.2 6442 9.9 149943 49450 48605 33 38 9808 20 + 0.56955 0.82164 0.3706 0.56742 170302_C17_011_QHF_FH_Rev04_#17_012_SER42_1 SER42 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 28017 20349 0 29474 11114 0 18360 1145 1064 0 81 3.9 9.6 0 0.44 622 1666380 15559 0.93 931 6 105112 9207 8511 8.8 23 1042 11 + 0.88273 1.187 0.6036 0.85412 170302_C17_011_QHF_FH_Rev04_#17_012_SER42_2 SER42 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 17497 73684 0 89036 58314 0 30722 26345 25323 0 1022 30 43 0 3.3 15177 1205989 61146 5.1 7217 12 139142 45628 44432 33 40 9866 22 + 0.6424 0.91981 0.44381 0.67951 170302_C17_011_QHF_FH_Rev04_#17_012_SER42_3 SER42 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 16494 77939 0 93422 62448 0 30974 32901 31990 0 911 35 51 0 2.9 16607 1251923 66126 5.3 6630 10 148833 49887 49058 34 39 10074 20 + 0.56742 0.8177 0.37461 0.57488 170302_C17_011_QHF_FH_Rev04_#17_012_SER43_1 SER43 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 26429 29571 0 42716 16328 0 26388 1442 1308 0 134 3.4 8 0 0.51 757 1674578 22300 1.3 1760 7.9 106445 12813 11766 12 25 1768 14 + 0.79647 1.0815 0.55356 0.78987 170302_C17_011_QHF_FH_Rev04_#17_012_SER43_2 SER43 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 16682 77607 0 92855 62351 0 30504 33129 31689 0 1440 36 51 0 4.7 19552 1176800 65140 5.5 7046 11 145342 49427 48235 34 41 10059 20 + 0.65181 0.93551 0.45824 0.70289 170302_C17_011_QHF_FH_Rev04_#17_012_SER43_3 SER43 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 16320 79387 0 94447 64311 0 30136 38914 37604 0 1310 41 58 0 4.3 19471 1245760 67760 5.4 6581 9.7 153444 51835 50977 34 39 10131 20 + 0.60278 0.87724 0.40608 0.629 170302_C17_011_QHF_FH_Rev04_#17_012_SER44_1 SER44 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 29313 12625 0 18532 6642 0 11890 279 273 0 6 1.5 4.1 0 0.05 184 1569639 9606 0.61 562 5.9 88931 5624 5106 6.3 20 637 11 + 0.86144 1.1369 0.58817 0.79541 170302_C17_011_QHF_FH_Rev04_#17_012_SER44_2 SER44 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 22447 52142 0 70264 33950 0 36314 7665 7284 0 381 11 21 0 1 3927 1602661 38922 2.4 4311 11 127531 24884 23841 20 26 4312 17 + 0.63459 0.90552 0.4267 0.68067 170302_C17_011_QHF_FH_Rev04_#17_012_SER44_3 SER44 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 24958 38562 0 52153 24811 0 27342 2954 2920 0 34 5.7 12 0 0.12 2007 1487345 31189 2.1 2888 9.3 102630 20030 19281 20 30 3519 18 + 0.46868 0.67024 0.26975 0.43849 170302_C17_011_QHF_PTM_Rev01_#17_012_SER32 SER32 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6591 20090 0 22123 18057 0 4066 10089 9745 0 344 46 54 0 8.5 9031 733751 19271 2.6 327 1.7 101126 17410 17065 17 23 506 2.9 + 0.35168 0.56859 0.20223 0.33129 170302_C17_011_QHF_PTM_Rev01_#17_012_SER33 SER33 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5405 25639 0 27511 23767 0 3744 14211 13767 0 444 52 58 0 12 12566 700972 24726 3.5 458 1.9 118312 22888 22602 19 24 730 3.2 + 0.37465 0.59118 0.23131 0.37138 170302_C17_011_QHF_PTM_Rev01_#17_012_SER34 SER34 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5758 22823 0 24806 20840 0 3966 12551 12193 0 358 51 59 0 9 11271 698215 21832 3.1 426 2 110054 20005 19723 18 23 665 3.3 + 0.36203 0.57428 0.21841 0.35015 170302_C17_011_QHF_PTM_Rev01_#17_012_SER35 SER35 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6097 21470 0 23591 19347 0 4244 10167 9812 0 355 43 51 0 8.4 8892 701445 20355 2.9 493 2.4 102992 18364 18009 18 24 723 3.9 + 0.34901 0.5546 0.20837 0.33672 170302_C17_011_QHF_PTM_Rev01_#17_012_SER36 SER36 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6045 22009 0 24138 19880 0 4258 11154 10752 0 402 46 54 0 9.4 9780 715012 20929 2.9 483 2.3 105733 18963 18607 18 23 685 3.6 + 0.36162 0.57026 0.21474 0.33984 170302_C17_011_QHF_PTM_Rev01_#17_012_SER37 SER37 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 7037 18120 0 20254 15986 0 4268 7690 7355 0 335 38 46 0 7.8 6698 743440 17040 2.3 447 2.6 94130 15107 14786 16 23 616 4.1 + 0.35832 0.57054 0.20772 0.33315 170302_C17_011_QHF_PTM_Rev01_#17_012_SER38 SER38 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6356 20572 0 22895 18249 0 4646 8420 8101 0 319 37 44 0 6.9 7520 728929 19490 2.7 426 2.2 103346 17402 16929 17 23 622 3.6 + 0.35534 0.56564 0.20958 0.33566 170302_C17_011_QHF_PTM_Rev01_#17_012_SER39 SER39 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6343 20062 0 22199 17925 0 4274 9102 8803 0 299 41 49 0 7 7985 704688 18876 2.7 552 2.9 95484 16851 16531 18 24 726 4.3 + 0.34876 0.5499 0.20428 0.32554 170302_C17_011_QHF_PTM_Rev01_#17_012_SER40 SER40 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6319 21518 0 23497 19539 0 3958 11275 10910 0 365 48 56 0 9.2 10091 736286 20404 2.8 495 2.4 108361 18523 18241 17 22 713 3.8 + 0.35543 0.56524 0.20963 0.33813 170327_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_015_SER56_1 SER56 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 28347 17613 0 26272 8916 0 17356 890 810 0 80 3.4 9.1 0 0.46 443 1763560 13039 0.74 736 5.6 119905 7353 6684 6.1 21 836 11 + 0.65944 0.87994 0.46414 0.64771 170327_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_015_SER56_2 SER56 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 18302 69125 0 89456 48666 0 40790 14376 14142 0 234 16 29 0 0.57 8709 1425098 55510 3.9 5501 9.9 147870 39086 37629 26 34 7219 18 + 0.63928 0.91425 0.43597 0.67942 170327_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_015_SER56_3 SER56 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 17343 73223 0 90735 55615 0 35120 19351 19040 0 311 21 34 0 0.89 11302 1324065 61849 4.7 5211 8.4 151866 46015 45131 30 37 8093 18 + 0.52087 0.77159 0.31768 0.49767 170327_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_015_SER57_1 SER57 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 27575 22894 0 33264 12442 0 20822 1325 1219 0 106 4 9.8 0 0.51 814 1708776 17519 1 1037 5.9 130961 10644 9779 8.1 25 1175 11 + 0.68918 0.95252 0.48178 0.68819 170327_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_015_SER57_2 SER57 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 17229 74403 0 90458 58310 0 32148 28316 27854 0 462 31 48 0 1.4 17171 1180092 61646 5.2 6863 11 140255 46109 44822 33 42 9644 21 + 0.62257 0.89359 0.42114 0.6497 170327_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_015_SER57_3 SER57 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 15702 81226 0 97285 65143 0 32142 38628 37468 0 1160 40 58 0 3.6 19944 1219879 69288 5.7 6501 9.4 153602 52570 51763 34 40 10426 20 + 0.57058 0.8322 0.37916 0.58807 170327_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_015_SER58_1 SER58 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 29227 13572 0 21079 5993 0 15086 225 210 0 15 1.1 3.5 0 0.099 124 1556400 9664 0.62 402 4.2 94324 5193 4557 5.5 19 503 9.7 + 0.80139 1.0756 0.66276 0.92578 170327_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_015_SER58_2 SER58 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 27744 19791 0 28842 10672 0 18170 1100 1022 0 78 3.8 9.6 0 0.43 730 1250267 15679 1.3 603 3.8 94861 9558 8689 10 25 771 8.1 + 0.70134 0.98571 0.48825 0.70185 170327_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_015_SER58_3 SER58 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 15357 83060 0 98497 67581 0 30916 42140 40771 0 1369 43 60 0 4.4 22771 1248278 71567 5.7 6322 8.8 163060 55494 54502 34 39 9963 18 + 0.58749 0.85426 0.39958 0.62441 170327_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_015_SER59_1 SER59 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 28474 15361 0 22433 8221 0 14212 786 732 0 54 3.5 8.9 0 0.38 478 1425417 11460 0.8 545 4.8 110748 7109 6529 6.4 23 688 9.7 + 0.75035 1.0346 0.53507 0.77362 170327_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_015_SER59_2 SER59 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 17734 71488 0 89192 53684 0 35508 19105 18790 0 315 21 35 0 0.89 11739 1289203 58529 4.5 6383 11 141240 42524 41149 30 38 8557 20 + 0.61177 0.88118 0.40823 0.63299 170327_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_015_SER59_3 SER59 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 16226 78167 0 95032 61270 0 33762 30029 29346 0 683 32 48 0 2 15637 1246110 66233 5.3 6145 9.3 147280 49481 48676 34 39 9783 20 + 0.54494 0.79805 0.35514 0.55246 170327_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_015_SER60_1 SER60 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 27967 20325 0 29795 10769 0 19026 1169 1095 0 74 3.9 10 0 0.39 734 1668811 15568 0.93 854 5.5 115881 9101 8299 7.9 24 968 11 + 0.7474 1.0382 0.52282 0.76676 170327_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_015_SER60_2 SER60 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 17115 74141 0 91141 57063 0 34078 21292 20985 0 307 23 37 0 0.9 13210 1319694 61482 4.7 6529 11 152323 45535 44113 30 37 9229 20 + 0.62359 0.89713 0.42023 0.64599 170327_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_015_SER60_3 SER60 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 15648 80617 0 97973 63237 0 34736 30127 29668 0 459 31 47 0 1.3 15790 1293483 68756 5.3 6122 8.9 159065 51212 50387 32 37 9912 19 + 0.56876 0.82955 0.37459 0.57846 170327_C17_020_QHF_PTM_Rev01_#17_015_SER47 SER47 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6692 19791 0 21829 17753 0 4076 10900 10547 0 353 50 59 0 8.7 9853 694068 18917 2.7 349 1.8 100765 17076 16740 17 23 511 3 + 0.34638 0.56874 0.20244 0.33636 170327_C17_020_QHF_PTM_Rev01_#17_015_SER48 SER48 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6131 21841 0 23933 19749 0 4184 12044 11674 0 370 50 59 0 8.8 10638 672807 20726 3.1 425 2.1 106493 18816 18526 18 23 614 3.3 + 0.34878 0.55771 0.20698 0.33487 170327_C17_020_QHF_PTM_Rev01_#17_015_SER49 SER49 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6122 20347 0 22648 18046 0 4602 10076 9709 0 367 44 54 0 8 8896 632622 19145 3 470 2.5 94407 17099 16748 18 24 703 4.1 + 0.33467 0.53887 0.20171 0.32636 170327_C17_020_QHF_PTM_Rev01_#17_015_SER50 SER50 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6306 20905 0 22945 18865 0 4080 11237 10862 0 375 49 58 0 9.2 9819 656517 19670 3 523 2.7 97911 17781 17497 18 24 684 3.8 + 0.34633 0.55704 0.20507 0.33443 170327_C17_020_QHF_PTM_Rev01_#17_015_SER51 SER51 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6851 19324 0 21400 17248 0 4152 9910 9546 0 364 46 55 0 8.8 8674 695627 18170 2.6 499 2.7 96979 16205 15900 17 23 662 4.1 + 0.34288 0.55357 0.19998 0.32653 170327_C17_020_QHF_PTM_Rev01_#17_015_SER52 SER52 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6633 19823 0 21907 17739 0 4168 10066 9722 0 344 46 55 0 8.3 8780 682406 18660 2.7 488 2.6 97740 16764 16460 17 24 644 3.8 + 0.33944 0.54336 0.20067 0.3274 170327_C17_020_QHF_PTM_Rev01_#17_015_SER53 SER53 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6344 19988 0 22197 17779 0 4418 10066 9703 0 363 45 55 0 8.2 8867 667510 18835 2.8 489 2.6 95472 16801 16470 18 25 685 4.1 + 0.3501 0.57144 0.21061 0.34837 170327_C17_020_QHF_PTM_Rev01_#17_015_SER54 SER54 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 7316 18595 0 20769 16419 0 4350 8987 8648 0 339 43 53 0 7.8 8094 800438 17625 2.2 433 2.5 104003 15541 15209 15 22 596 3.8 + 0.34344 0.55013 0.19577 0.31575 170327_C17_020_QHF_PTM_Rev01_#17_015_SER55 SER55 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6503 20445 0 22384 18506 0 3878 10801 10439 0 362 48 56 0 9.3 9493 727127 19392 2.7 460 2.4 107319 17567 17281 16 22 625 3.6 + 0.34885 0.56388 0.20461 0.3341 170403_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_017_SER71_1 SER71 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 28070 19425 0 28262 10482 0 17780 930 877 0 53 3.3 8.4 0 0.3 516 1436934 14963 1 788 5.3 94922 8784 8012 9.3 25 932 11 + 0.62932 0.88174 0.45695 0.66778 170403_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_017_SER71_2 SER71 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 21153 56965 0 74594 39084 0 35510 8375 8246 0 129 11 21 0 0.36 5589 1300838 44798 3.4 4879 11 120354 30825 29775 26 35 5981 19 + 0.53565 0.78654 0.34587 0.57788 170403_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_017_SER71_3 SER71 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 17296 74095 0 90208 57894 0 32314 24503 24106 0 397 27 42 0 1.2 13733 1271330 62544 4.9 6096 9.7 145426 46404 45627 32 38 9415 20 + 0.527 0.76408 0.33064 0.50772 170403_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_017_SER72_1 SER72 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 27472 22799 0 33570 11914 0 21656 924 881 0 43 2.8 7.4 0 0.2 556 1427086 17892 1.3 783 4.4 103422 10498 9642 10 25 958 9.1 + 0.7247 1.0186 0.52161 0.75867 170403_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_017_SER72_2 SER72 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 16288 79559 0 96624 62458 0 34166 33816 32429 0 1387 35 52 0 4.1 20716 1227823 66495 5.4 7101 11 154193 49899 48313 32 40 10008 20 + 0.6516 0.93033 0.45388 0.69398 170403_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_017_SER72_3 SER72 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 16399 77610 0 93929 61227 0 32702 29425 28825 0 600 31 47 0 1.8 16700 1273886 66403 5.2 5647 8.5 159124 50545 49645 32 37 8978 18 + 0.55778 0.81528 0.36609 0.57197 170403_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_017_SER73_1 SER73 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 26475 28875 0 41457 16155 0 25302 1467 1400 0 67 3.5 8.7 0 0.26 877 1602717 23008 1.4 1056 4.6 122589 14307 13154 12 26 1234 8.6 + 0.64392 0.9415 0.46149 0.70118 170403_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_017_SER73_2 SER73 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 16760 76284 0 92133 60373 0 31760 27693 26887 0 806 30 45 0 2.5 17963 1237775 64161 5.2 6738 11 152468 48547 47176 32 39 9644 20 + 0.64032 0.92176 0.43152 0.66371 170403_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_017_SER73_3 SER73 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 15855 81006 0 97494 64486 0 33008 37375 36303 0 1072 38 56 0 3.2 19627 1266901 68718 5.4 6539 9.5 158691 52104 51177 33 38 10148 19 + 0.58535 0.84965 0.3954 0.61212 170403_C17_020_QHF_PTM_Rev01_#17_017_SER61 SER61 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5769 20871 0 23319 18421 0 4898 10256 9917 0 339 44 54 0 6.9 8997 594143 19797 3.3 371 1.9 87267 17576 17223 20 27 666 3.8 + 0.33748 0.54168 0.20215 0.3291 170403_C17_020_QHF_PTM_Rev01_#17_017_SER62 SER62 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5669 23659 0 25820 21498 0 4322 13101 12742 0 359 51 59 0 8.3 11821 660572 22728 3.4 346 1.5 108852 20769 20451 19 24 566 2.7 + 0.34298 0.54979 0.20714 0.33483 170403_C17_020_QHF_PTM_Rev01_#17_017_SER63 SER63 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6590 19465 0 21574 17356 0 4218 9924 9579 0 345 46 55 0 8.2 8892 649102 18507 2.9 389 2.1 91680 16517 16244 18 23 585 3.5 + 0.33933 0.55021 0.19809 0.32638 170403_C17_020_QHF_PTM_Rev01_#17_017_SER64 SER64 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6250 21133 0 23136 19130 0 4006 11116 10775 0 341 48 56 0 8.5 10004 671397 20235 3 369 1.8 101697 18352 18038 18 23 574 3.1 + 0.3436 0.55628 0.20392 0.33476 170403_C17_020_QHF_PTM_Rev01_#17_017_SER65 SER65 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6008 21338 0 23316 19360 0 3956 10436 10177 0 259 45 53 0 6.5 9389 664984 20527 3.1 275 1.3 102690 18747 18402 18 24 489 2.6 + 0.34899 0.56491 0.2074 0.3369 170403_C17_020_QHF_PTM_Rev01_#17_017_SER66 SER66 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5240 23707 0 25663 21751 0 3912 13192 12782 0 410 51 59 0 10 11645 617260 22649 3.7 433 1.9 104455 20799 20522 20 25 696 3.3 + 0.34338 0.55068 0.21524 0.34761 170403_C17_020_QHF_PTM_Rev01_#17_017_SER67 SER67 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6305 20359 0 22667 18051 0 4616 8603 8377 0 226 38 46 0 4.9 7504 638694 19302 3 442 2.3 91800 17143 16801 19 25 664 3.9 + 0.33184 0.53163 0.19671 0.31659 170403_C17_020_QHF_PTM_Rev01_#17_017_SER68 SER68 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 7321 16285 0 18789 13781 0 5008 5273 5046 0 227 28 37 0 4.5 4626 668265 15135 2.3 404 2.7 75822 12989 12600 17 27 582 4.5 + 0.29957 0.46596 0.17317 0.27143 170403_C17_020_QHF_PTM_Rev01_#17_017_SER69 SER69 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5511 22309 0 24528 20090 0 4438 11138 10768 0 370 45 54 0 8.3 9662 610070 21061 3.5 457 2.2 95916 19085 18786 20 26 702 3.7 + 0.34624 0.55664 0.214 0.34853 170403_C17_020_QHF_PTM_Rev01_#17_017_SER70 SER70 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5276 23787 0 25817 21757 0 4060 12826 12421 0 405 50 57 0 10 10993 619065 22507 3.6 523 2.3 103767 20657 20385 20 25 763 3.7 + 0.34937 0.5571 0.21779 0.35246 170602_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_022_SER91_1 SER91 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 25403 33540 0 48794 18130 0 30664 1603 1511 0 92 3.3 8.3 0 0.3 902 1856820 26219 1.4 1401 5.3 155954 15613 14315 10 24 1568 10 + 0.73125 1.0079 0.49644 0.70767 170602_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_022_SER91_2 SER91 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 16554 77163 0 93456 60818 0 32638 27750 26922 0 828 30 44 0 2.5 17177 1269614 64737 5.1 6972 11 158999 48489 47313 30 38 9900 20 + 0.67057 0.95923 0.46148 0.70146 170602_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_022_SER91_3 SER91 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 15841 80938 0 98198 63646 0 34552 33421 32525 0 896 34 51 0 2.6 17793 1424239 68995 4.8 6361 9.2 180939 51613 50806 29 33 9928 19 + 0.61543 0.88169 0.41079 0.62588 170602_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_022_SER92_1 SER92 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 26285 28890 0 41611 16013 0 25598 1132 1071 0 61 2.7 6.7 0 0.24 661 1709947 22834 1.3 1219 5.3 135143 13870 12838 10 25 1450 10 + 0.78952 1.0823 0.55947 0.80357 170602_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_022_SER92_2 SER92 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 17516 72689 0 88993 56287 0 32706 21217 20676 0 541 24 37 0 1.7 12939 1245623 59810 4.8 7124 12 143763 43680 42595 30 38 9908 23 + 0.62713 0.89121 0.42113 0.64317 170602_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_022_SER92_3 SER92 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 17101 75135 0 92008 58184 0 33824 23934 23486 0 448 26 40 0 1.3 13075 1389456 63153 4.5 6559 10 162086 46009 45304 28 34 9920 22 + 0.5625 0.80878 0.35655 0.54349 170602_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_022_SER94_1 SER94 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 27067 24641 0 36276 12856 0 23420 810 761 0 49 2.2 5.9 0 0.21 523 1319187 18995 1.4 1062 5.6 98660 11062 10226 11 26 1258 11 + 0.83698 1.1195 0.5694 0.78217 170602_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_022_SER94_2 SER94 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 16635 78770 0 96248 61262 0 34986 32603 31362 0 1241 34 51 0 3.5 18812 1240531 65491 5.3 7296 11 148253 48366 47000 33 39 10363 21 + 0.63293 0.90874 0.43992 0.67456 170602_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_022_SER94_3 SER94 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 16344 80035 0 97727 62295 0 35432 35125 34149 0 976 36 55 0 2.8 17834 1324719 67758 5.1 6571 9.7 159042 49694 49014 31 36 10229 21 + 0.58918 0.84515 0.39302 0.60496 170602_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_023_SER105_1 SER105 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 26932 25724 0 37815 13505 0 24310 973 905 0 68 2.6 6.7 0 0.28 541 1685687 19844 1.2 1183 6 119377 11223 10336 9.4 24 1313 12 + 0.73177 1.0008 0.52881 0.75221 170602_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_023_SER105_2 SER105 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 16941 75363 0 91725 58907 0 32818 20834 20263 0 571 23 34 0 1.7 12171 1297079 63517 4.9 6490 10 153686 47342 46108 31 37 9309 20 + 0.65449 0.93363 0.44568 0.68147 170602_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_023_SER105_3 SER105 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 16073 80306 0 97842 62724 0 35118 31069 30200 0 869 32 48 0 2.5 15263 1322676 68008 5.1 6458 9.5 162557 50153 49336 31 36 10182 20 + 0.58139 0.83847 0.39382 0.60298 170602_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_023_SER106_1 SER106 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 27886 20685 0 30668 10590 0 20078 687 645 0 42 2.2 6.1 0 0.21 485 1679863 16217 0.97 773 4.8 119113 9256 8444 7.8 23 897 9.7 + 0.75511 1.0597 0.5044 0.74763 170602_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_023_SER106_2 SER106 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 18081 70108 0 86854 53208 0 33646 15993 15589 0 404 18 29 0 1.2 9538 1330631 57340 4.3 6957 12 142326 41551 40306 29 36 8903 21 + 0.63738 0.90095 0.42349 0.64754 170602_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_023_SER106_3 SER106 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 17281 73458 0 90146 56592 0 33554 15411 15158 0 253 17 27 0 0.75 9314 1387172 62232 4.5 5832 9.4 161184 46060 45257 29 34 8845 19 + 0.55624 0.79623 0.34178 0.51755 170602_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_023_SER108_1 SER108 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 27774 21462 0 31463 11363 0 20100 864 823 0 41 2.7 7.2 0 0.2 530 1887998 16813 0.89 854 5.1 137871 9836 8866 7.1 23 1009 10 + 0.86312 1.1718 0.58281 0.81772 170602_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_023_SER108_2 SER108 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 18958 66825 0 83838 49654 0 34184 15123 14764 0 359 18 30 0 1.1 8867 1339004 53293 4 7004 13 132854 37574 36490 28 36 8745 23 + 0.59676 0.85088 0.39117 0.60783 170602_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_023_SER108_3 SER108 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 17171 74744 0 91868 57412 0 34456 19849 19520 0 329 22 34 0 0.95 10866 1294921 62461 4.8 6811 11 139791 44625 43927 32 38 10347 23 + 0.53953 0.77869 0.34045 0.52525 170602_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_023_SER109_1 SER109 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 26692 27081 0 39546 14430 0 25116 1077 1027 0 50 2.7 7.1 0 0.2 708 1973816 21698 1.1 894 4.1 179249 12863 11741 7.2 22 1086 8.4 + 0.81331 1.1083 0.55254 0.78183 170602_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_023_SER109_2 SER109 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 16579 77168 0 94582 59672 0 34910 20171 19588 0 583 21 33 0 1.7 12101 1392355 64828 4.7 6640 10 172243 47911 46588 28 34 9405 20 + 0.65945 0.94261 0.44534 0.67955 170602_C17_020_QHF_FH_maintenance_hela_300nl_Rev04_#17_023_SER109_3 SER109 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 14994 83256 0 103638 62792 0 40846 24727 24192 0 535 24 39 0 1.3 12933 1356376 70320 5.2 6010 8.5 176906 51471 50628 29 33 9500 18 + 0.59529 0.85873 0.39619 0.60648 170602_C17_020_QHF_PTM_Rev01_#17_022_SER80 SER80 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5984 20969 0 23169 18769 0 4400 10617 10350 0 267 46 55 0 6.1 9351 754221 19717 2.6 560 2.8 113805 17644 17305 16 21 853 4.8 + 0.37519 0.59418 0.22321 0.35569 170602_C17_020_QHF_PTM_Rev01_#17_022_SER81 SER81 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5390 23727 0 25429 22025 0 3404 13697 13375 0 322 54 61 0 9.5 12237 746440 22932 3.1 306 1.3 127357 21397 21155 17 21 512 2.4 + 0.36586 0.57695 0.22732 0.35997 170602_C17_020_QHF_PTM_Rev01_#17_022_SER82 SER82 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6525 19781 0 21730 17832 0 3898 8823 8584 0 239 41 48 0 6.1 7899 777413 18834 2.4 416 2.2 109732 17038 16707 16 21 568 3.3 + 0.3542 0.55877 0.20675 0.32898 170602_C17_020_QHF_PTM_Rev01_#17_022_SER83 SER83 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5163 23770 0 25429 22111 0 3318 12978 12626 0 352 51 57 0 11 11221 700472 22822 3.3 414 1.8 118406 21246 21042 18 22 622 2.9 + 0.3536 0.54794 0.22249 0.34874 170602_C17_020_QHF_PTM_Rev01_#17_022_SER84 SER84 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5462 27934 0 29316 26552 0 2764 18653 18203 0 450 64 69 0 16 16585 860967 27358 3.2 236 0.86 155554 26039 25842 17 20 403 1.5 + 0.3658 0.57042 0.23475 0.37186 170602_C17_020_QHF_PTM_Rev01_#17_022_SER85 SER85 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5432 24619 0 26569 22669 0 3900 13405 13050 0 355 50 58 0 9.1 11746 728619 23354 3.2 564 2.4 123211 21474 21195 17 22 838 3.9 + 0.37832 0.59487 0.23328 0.37097 170602_C17_020_QHF_PTM_Rev01_#17_022_SER86 SER86 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 8280 14940 0 16882 12998 0 3884 5703 5602 0 101 34 43 0 2.6 5227 913305 14364 1.6 201 1.4 104879 12598 12112 12 20 326 2.6 + 0.38452 0.60013 0.21614 0.33604 170602_C17_020_QHF_PTM_Rev01_#17_022_SER87 SER87 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6963 19408 0 21442 17374 0 4068 9211 8940 0 271 43 51 0 6.7 8339 828080 18429 2.2 444 2.4 112611 16500 16202 15 20 583 3.5 + 0.36154 0.57685 0.20984 0.33921 170602_C17_020_QHF_PTM_Rev01_#17_022_SER88 SER88 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6924 20611 0 22391 18831 0 3560 11214 10858 0 356 50 58 0 10 10018 910293 19910 2.2 318 1.6 128688 18199 17903 14 20 455 2.5 + 0.36985 0.59141 0.21632 0.35033 170602_C17_020_QHF_PTM_Rev01_#17_022_SER89 SER89 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6642 22630 0 24477 20783 0 3694 13089 12652 0 437 53 61 0 12 11733 878494 21947 2.5 307 1.4 132513 20183 19918 15 20 475 2.4 + 0.38011 0.59214 0.22625 0.36118 170602_C17_020_QHF_PTM_Rev01_#17_023_SER95 SER95 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5245 24462 0 26215 22709 0 3506 13639 13319 0 320 52 59 0 9.1 12221 706414 23621 3.3 377 1.6 121204 21896 21643 18 22 632 2.9 + 0.36959 0.58142 0.22533 0.35766 170602_C17_020_QHF_PTM_Rev01_#17_023_SER96 SER96 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5562 25203 0 27326 23080 0 4246 14217 13887 0 330 52 60 0 7.8 12781 795418 24305 3.1 304 1.3 131198 22420 22159 17 22 548 2.4 + 0.38393 0.60519 0.23405 0.37072 170602_C17_020_QHF_PTM_Rev01_#17_023_SER97 SER97 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 4924 21190 0 22966 19414 0 3552 9714 9491 0 223 42 49 0 6.3 8609 601767 20269 3.4 366 1.8 98921 18589 18408 19 23 612 3.3 + 0.33776 0.53149 0.21118 0.34173 170602_C17_020_QHF_PTM_Rev01_#17_023_SER98 SER98 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5391 24387 0 26264 22508 0 3756 12725 12498 0 227 48 56 0 6 11595 707085 23454 3.3 391 1.7 120178 21702 21470 18 22 602 2.8 + 0.36767 0.57524 0.22288 0.35497 170602_C17_020_QHF_PTM_Rev01_#17_023_SER101 SER101 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5341 26907 0 28457 25357 0 3100 16215 15811 0 404 57 62 0 13 14508 776002 26135 3.4 359 1.4 138247 24604 24427 18 21 588 2.4 + 0.36678 0.56657 0.23313 0.37092 170602_C17_020_QHF_PTM_Rev01_#17_023_SER102 SER102 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5575 26277 0 28103 24451 0 3652 14884 14460 0 424 53 59 0 12 13320 770472 25536 3.3 341 1.3 133971 23758 23508 18 22 574 2.4 + 0.37191 0.57091 0.22595 0.35362 170602_C17_020_QHF_PTM_Rev01_#17_023_SER103 SER103 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5497 24916 0 26744 23088 0 3656 13523 13210 0 313 51 57 0 8.6 11978 732351 24088 3.3 343 1.4 124858 22346 22132 18 22 600 2.7 + 0.36708 0.57316 0.22455 0.35482 170602_C17_020_QHF_PTM_Rev01_#17_023_SER104 SER104 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5394 24715 0 26685 22745 0 3940 12535 12292 0 243 47 54 0 6.2 11250 703997 23697 3.4 436 1.8 119541 21878 21595 18 23 637 2.9 + 0.36894 0.57715 0.22685 0.35967 170602_C17_024_QHF_PTM_Rev01_#17_023_SER99 SER99 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5524 27619 0 28988 26250 0 2738 18321 17869 0 452 63 68 0 17 16906 943386 26922 2.9 344 1.3 164426 25542 25350 16 20 547 2.1 + 0.38789 0.6004 0.24073 0.37978 170602_C17_025_QHF_PTM_Rev01_#17_023_SER100 SER100 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5508 27115 0 28516 25714 0 2802 17264 16790 0 474 61 65 0 17 15880 938887 26340 2.8 336 1.3 163523 24950 24738 15 19 534 2.1 + 0.39021 0.60714 0.24423 0.38937 180302_C18_020_QHF2_FH_maintenance_hela_300nl_Rev04_#18_016_SER156_1 SER156 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 25866 27652 0 41317 13939 0 27378 2115 1793 0 322 5.1 13 0 1.2 945 1709826 20267 1.2 1552 7.7 112425 10715 9697 9.5 25 1482 14 + 0.77849 1.0782 0.51657 0.74871 180302_C18_020_QHF2_FH_maintenance_hela_300nl_Rev04_#18_016_SER156_2 SER156 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 17529 73858 0 92693 55015 0 37678 32324 30280 0 2044 35 55 0 5.4 18444 1249016 60364 4.8 6725 11 142669 43404 42331 30 36 9276 21 + 0.60661 0.8868 0.41218 0.64508 180302_C18_020_QHF2_FH_maintenance_hela_300nl_Rev04_#18_016_SER156_3 SER156 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 16624 77760 0 97834 57674 0 40160 36789 34973 0 1816 38 61 0 4.5 18256 1298687 64227 4.9 6603 10 150832 45610 44972 30 34 9828 22 + 0.53363 0.7945 0.34703 0.55681 180302_C18_020_QHF2_FH_maintenance_hela_300nl_Rev04_#18_016_SER157_1 SER157 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 26227 25673 0 38766 12536 0 26230 1841 1613 0 228 4.7 13 0 0.87 773 1760218 18762 1.1 1412 7.5 113514 9771 8849 8.6 24 1384 14 + 0.74444 1.0233 0.50489 0.73014 180302_C18_020_QHF2_FH_maintenance_hela_300nl_Rev04_#18_016_SER157_2 SER157 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 16897 75875 0 94658 57070 0 37588 33859 31922 0 1937 36 56 0 5.2 19730 1265400 62567 4.9 6792 11 147728 45341 44217 31 36 9505 21 + 0.6131 0.89775 0.41621 0.65353 180302_C18_020_QHF2_FH_maintenance_hela_300nl_Rev04_#18_016_SER157_3 SER157 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 16349 78633 0 98295 58961 0 39334 37895 36109 0 1786 39 61 0 4.5 19195 1309575 65513 5 6422 9.8 153978 47060 46374 31 34 9762 21 + 0.53316 0.79419 0.34919 0.55847 180302_C18_020_QHF2_PTM_Rev01_#18_016_SER148 SER148 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5230 28107 0 30075 26139 0 3936 17177 16654 0 523 57 64 0 13 15596 731822 27330 3.7 330 1.2 125786 25396 25024 20 24 596 2.3 + 0.34491 0.55267 0.20889 0.34396 180302_C18_020_QHF2_PTM_Rev01_#18_016_SER149 SER149 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5237 27571 0 29766 25376 0 4390 16201 15667 0 534 54 62 0 12 14668 717253 26711 3.7 358 1.3 120453 24644 24248 20 25 574 2.3 + 0.34623 0.55652 0.208 0.34008 180302_C18_020_QHF2_PTM_Rev01_#18_016_SER150 SER150 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5451 30662 0 32578 28746 0 3832 19701 19192 0 509 60 67 0 13 18125 787616 30025 3.8 255 0.85 138426 28153 27897 20 24 503 1.8 + 0.3435 0.53994 0.21387 0.34931 180302_C18_020_QHF2_PTM_Rev01_#18_016_SER151 SER151 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5255 28363 0 30513 26213 0 4300 17360 16796 0 564 57 64 0 13 14974 709559 26996 3.8 656 2.4 118200 24755 24453 21 25 959 3.9 + 0.35374 0.56695 0.21829 0.36023 180307_C18_020_QHF2_FH_maintenance_hela_300nl_Rev04_#18_017_SER170_1 SER170 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 25533 29417 0 44113 14631 0 29482 2048 1806 0 242 4.6 12 0 0.82 943 1726179 21888 1.3 1649 7.5 112302 11428 10391 10 26 1660 15 + 0.73535 1.0438 0.5101 0.76516 180307_C18_020_QHF2_FH_maintenance_hela_300nl_Rev04_#18_017_SER170_2 SER170 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 17828 72804 0 92377 53211 0 39166 31839 29664 0 2175 34 56 0 5.6 17566 1348051 58233 4.3 7513 13 147208 40703 39507 28 33 9810 24 + 0.61334 0.89166 0.4241 0.66768 180307_C18_020_QHF2_FH_maintenance_hela_300nl_Rev04_#18_017_SER170_3 SER170 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 16936 77068 0 97256 56864 0 40392 36936 34841 0 2095 38 61 0 5.2 17604 1362548 62995 4.6 7092 11 153652 43997 43290 29 32 10230 23 + 0.53255 0.78602 0.35021 0.55756 180307_C18_020_QHF2_FH_maintenance_hela_300nl_Rev04_#18_017_SER171_1 SER171 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 24397 35489 0 52851 18079 0 34772 2455 2305 0 150 4.6 13 0 0.43 1090 1766439 25960 1.5 2655 10 114973 13204 11891 11 25 2453 19 + 0.71547 1.0249 0.50114 0.74753 180307_C18_020_QHF2_FH_maintenance_hela_300nl_Rev04_#18_017_SER171_2 SER171 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 17371 75433 0 94398 56446 0 37952 36519 33889 0 2630 39 60 0 6.9 20892 1370537 61065 4.5 7670 13 155436 43446 42208 28 33 10378 24 + 0.61958 0.90289 0.42873 0.66576 180307_C18_020_QHF2_FH_maintenance_hela_300nl_Rev04_#18_017_SER171_3 SER171 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 16614 78461 0 98293 58609 0 39684 39346 37140 0 2206 40 63 0 5.6 20215 1377358 64766 4.7 6931 11 160643 46136 45392 29 32 10187 22 + 0.55311 0.81372 0.36313 0.5722 180307_C18_020_QHF2_FH_maintenance_hela_300nl_Rev04_#18_017_SER172_1 SER172 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 25647 28931 0 43564 14210 0 29354 2211 1885 0 326 5.1 13 0 1.1 1052 1748526 21342 1.2 1738 8.1 114841 11010 9996 9.6 25 1641 15 + 0.79654 1.0818 0.51935 0.7469 180307_C18_020_QHF2_FH_maintenance_hela_300nl_Rev04_#18_017_SER172_2 SER172 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 17984 72436 0 92229 52633 0 39596 32477 30350 0 2127 35 58 0 5.4 17888 1345054 57586 4.3 7674 13 143913 39820 38566 28 33 9996 25 + 0.61629 0.89332 0.42233 0.6586 180307_C18_020_QHF2_FH_maintenance_hela_300nl_Rev04_#18_017_SER172_3 SER172 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 17161 76612 0 97140 56068 0 41072 38007 35625 0 2382 39 64 0 5.8 18058 1387029 61634 4.4 7584 12 153194 42676 42037 28 31 10543 25 + 0.55038 0.80934 0.36325 0.57612 180307_C18_020_QHF2_PTM_Rev01_#18_017_SER160 SER160 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5644 30853 0 32732 28974 0 3758 20412 19858 0 554 62 69 0 15 18349 788879 30105 3.8 306 1 137954 28292 28038 21 24 545 1.9 + 0.35099 0.5618 0.21697 0.35562 180307_C18_020_QHF2_PTM_Rev01_#18_017_SER161 SER161 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5611 30263 0 32100 28426 0 3674 19467 18998 0 469 61 67 0 13 17536 768087 29537 3.8 297 1 133231 27722 27457 21 24 564 2 + 0.35279 0.56597 0.22055 0.36585 180307_C18_020_QHF2_PTM_Rev01_#18_017_SER162 SER162 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5624 30293 0 32123 28463 0 3660 19807 19216 0 591 62 68 0 16 18002 769416 29534 3.8 320 1.1 133912 27763 27507 21 24 552 2 + 0.34652 0.55118 0.21469 0.34935 180307_C18_020_QHF2_PTM_Rev01_#18_017_SER163 SER163 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5681 30146 0 32123 28169 0 3954 19637 19011 0 626 61 67 0 16 17919 774277 29346 3.8 331 1.1 133778 27397 27080 20 24 585 2.1 + 0.34695 0.55276 0.2098 0.34017 180307_C18_020_QHF2_PTM_Rev01_#18_017_SER164 SER164 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5731 32283 0 34241 30325 0 3916 21631 21035 0 596 63 69 0 15 19644 810088 31543 3.9 279 0.88 143440 29657 29399 21 24 565 1.9 + 0.35284 0.55456 0.2234 0.36256 180307_C18_020_QHF2_PTM_Rev01_#18_017_SER165 SER165 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5667 30722 0 32555 28889 0 3666 20931 20325 0 606 64 70 0 17 19039 782818 30000 3.8 290 0.97 137942 28216 27933 20 23 540 1.9 + 0.3469 0.54572 0.21617 0.34884 180311_C18_020_QHF2_FH_maintenance_hela_300nl_Rev04_#18_018_SER183_1 SER183 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 26018 27475 0 41813 13067 0 28746 1839 1580 0 259 4.4 12 0 0.9 803 1767678 19991 1.1 1616 8.1 110128 9903 8812 9 24 1571 16 + 0.79915 1.12 0.52964 0.7782 180311_C18_020_QHF2_FH_maintenance_hela_300nl_Rev04_#18_018_SER183_2 SER183 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 18035 70701 0 90608 50778 0 39830 27897 26578 0 1319 31 52 0 3.3 15385 1265922 56458 4.5 7052 12 131929 38797 37785 29 35 9486 24 + 0.60145 0.87782 0.41102 0.64669 180311_C18_020_QHF2_FH_maintenance_hela_300nl_Rev04_#18_018_SER183_3 SER183 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 17240 74987 0 95537 54411 0 41126 33694 32073 0 1621 35 59 0 3.9 16145 1326352 60709 4.6 6986 12 143975 41754 41121 29 33 10094 24 + 0.53557 0.78862 0.34878 0.55693 180311_C18_020_QHF2_FH_maintenance_hela_300nl_Rev04_#18_018_SER184_1 SER184 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 25897 27854 0 41962 13706 0 28256 2142 1850 0 292 5.1 13 0 1 935 1791472 20194 1.1 1751 8.7 110723 10243 9200 9.3 25 1656 16 + 0.71375 1.0067 0.46865 0.69303 180311_C18_020_QHF2_FH_maintenance_hela_300nl_Rev04_#18_018_SER184_2 SER184 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 18024 70970 0 90889 51043 0 39846 28699 27101 0 1598 32 53 0 4 16197 1295607 56704 4.4 7027 12 135501 39254 38245 29 35 9309 24 + 0.59419 0.85893 0.4033 0.62357 180311_C18_020_QHF2_FH_maintenance_hela_300nl_Rev04_#18_018_SER184_3 SER184 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 16775 77163 0 98056 56248 0 41808 34659 33059 0 1600 35 59 0 3.8 17135 1328920 63448 4.8 6612 10 147956 44207 43509 30 34 9808 22 + 0.54511 0.8068 0.35643 0.56645 180311_C18_020_QHF2_PTM_Rev01_#18_018_SER175 SER175 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5540 27313 0 29187 25439 0 3748 17494 16972 0 522 60 67 0 14 15949 701409 26433 3.8 385 1.5 118591 24615 24336 21 25 626 2.5 + 0.34246 0.55314 0.20838 0.3459 180311_C18_020_QHF2_PTM_Rev01_#18_018_SER176 SER176 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5597 26758 0 28719 24797 0 3922 16957 16396 0 561 59 66 0 14 15402 716936 25735 3.6 459 1.8 119781 23866 23589 20 24 653 2.7 + 0.34831 0.56414 0.2081 0.34568 180311_C18_020_QHF2_PTM_Rev01_#18_018_SER177 SER177 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5655 30527 0 32286 28768 0 3518 20486 19881 0 605 63 69 0 17 18762 765072 29723 3.9 363 1.2 133011 27948 27687 21 24 617 2.2 + 0.35738 0.57102 0.22153 0.36464 180311_C18_020_QHF2_PTM_Rev01_#18_018_SER178 SER178 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5609 30034 0 31796 28272 0 3524 20185 19573 0 612 63 69 0 17 18580 749334 29213 3.9 378 1.3 129970 27470 27203 21 24 615 2.2 + 0.34884 0.56054 0.21683 0.35909 180311_C18_020_QHF2_PTM_Rev01_#18_018_SER179 SER179 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5667 28594 0 30752 26436 0 4316 18272 17637 0 635 59 67 0 15 16490 726658 27561 3.8 461 1.7 122549 25464 25190 21 25 712 2.8 + 0.35077 0.56318 0.21048 0.34704 180311_C18_020_QHF2_PTM_Rev01_#18_018_SER180 SER180 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5561 28698 0 30588 26806 0 3782 18583 18046 0 537 61 67 0 14 16898 715115 27755 3.9 416 1.5 122882 25916 25636 21 25 655 2.5 + 0.34815 0.55218 0.21354 0.34872 180311_C18_020_QHF2_PTM_Rev01_#18_018_SER181 SER181 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5714 30868 0 32746 28990 0 3756 21147 20467 0 680 65 71 0 18 19148 735649 29960 4.1 412 1.4 131834 28085 27829 21 25 675 2.4 + 0.35459 0.56864 0.21932 0.36386 180311_C18_020_QHF2_PTM_Rev01_#18_018_SER182 SER182 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5658 29384 0 31186 27582 0 3604 20035 19415 0 620 64 70 0 17 18362 749900 28583 3.8 391 1.4 130608 26754 26453 20 24 616 2.3 + 0.34868 0.55207 0.21223 0.34627 180311_C18_021_QHF2_FH_maintenance_hela_300nl_Rev04_#18_018_SER185_1 SER185 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 26151 26077 0 39303 12813 0 26490 2015 1694 0 321 5.1 13 0 1.2 791 1792646 18942 1.1 1595 8.4 111996 9762 8826 8.7 24 1444 15 + 0.71259 0.99866 0.4813 0.69815 180311_C18_021_QHF2_FH_maintenance_hela_300nl_Rev04_#18_018_SER185_2 SER185 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 17630 72706 0 93196 52190 0 41006 28009 26075 0 1934 30 50 0 4.7 15736 1351352 57845 4.3 7695 13 135801 39645 38450 29 34 9909 25 + 0.65374 0.95016 0.45602 0.71739 180311_C18_021_QHF2_FH_maintenance_hela_300nl_Rev04_#18_018_SER185_3 SER185 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 16664 77929 0 100053 55779 0 44274 32748 30928 0 1820 33 55 0 4.1 16018 1413533 63028 4.5 7270 12 147906 42649 41846 29 32 10401 24 + 0.59236 0.85862 0.39061 0.60706 180311_C18_021_QHF2_FH_maintenance_hela_300nl_Rev04_#18_018_SER186_1 SER186 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 25653 28749 0 43662 13766 0 29896 1884 1665 0 219 4.3 12 0 0.73 833 1786822 20718 1.2 1730 8.4 110448 10280 9315 9.3 24 1682 16 + 0.73518 1.0263 0.50475 0.74579 180311_C18_021_QHF2_FH_maintenance_hela_300nl_Rev04_#18_018_SER186_2 SER186 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 17862 72648 0 93322 51958 0 41364 28576 26467 0 2109 31 51 0 5.1 15284 1382935 57072 4.1 7759 14 138237 38798 37504 28 33 9990 26 + 0.64477 0.92962 0.45076 0.70472 180311_C18_021_QHF2_FH_maintenance_hela_300nl_Rev04_#18_018_SER186_3 SER186 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 16741 77311 0 100036 54566 0 45470 30835 29013 0 1822 31 53 0 4 14446 1410559 62015 4.4 7506 12 144973 41219 40493 28 32 10440 25 + 0.57969 0.84676 0.38005 0.59521 180311_C18_021_QHF2_FH_maintenance_hela_300nl_Rev04_#18_018_SER187_1 SER187 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 25912 27269 0 41424 13040 0 28384 1841 1588 0 253 4.4 12 0 0.89 807 1830170 19610 1.1 1604 8.2 109849 9869 8990 9 24 1524 15 + 0.80456 1.1068 0.55129 0.79749 180311_C18_021_QHF2_FH_maintenance_hela_300nl_Rev04_#18_018_SER187_2 SER187 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 18075 71036 0 91593 50463 0 41130 24943 23235 0 1708 27 46 0 4.2 13491 1374287 55920 4.1 7667 14 134356 37814 36531 28 34 9691 26 + 0.64532 0.93161 0.44959 0.69964 180311_C18_021_QHF2_FH_maintenance_hela_300nl_Rev04_#18_018_SER187_3 SER187 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 16614 77881 0 100425 55323 0 45102 29701 28280 0 1421 30 51 0 3.2 13855 1402309 62828 4.5 7302 12 145671 42249 41413 29 33 10177 24 + 0.57921 0.84531 0.3836 0.60302 180326_C18_005_QHF1_FH_Rev04_#18_011_SER143_1 SER143 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 26265 28322 0 41866 14674 0 27192 1251 1049 0 202 3 7.1 0 0.74 566 2063816 20881 1 1623 7.8 139623 11370 10383 8.1 21 1708 15 + 0.84273 1.1516 0.56027 0.81515 180326_C18_005_QHF1_FH_Rev04_#18_011_SER143_2 SER143 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 18564 69668 0 86631 52703 0 33928 26551 24701 0 1850 31 47 0 5.5 12754 1514851 55426 3.7 7421 13 151516 39973 38798 26 31 8943 22 + 0.70131 0.99434 0.4669 0.71178 180326_C18_005_QHF1_FH_Rev04_#18_011_SER143_3 SER143 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 16194 79703 0 95852 63554 0 32298 36335 34925 0 1410 38 55 0 4.4 17740 1450220 67413 4.6 6526 9.7 168159 51284 50528 30 34 9658 19 + 0.60092 0.87004 0.3985 0.61507 180326_C18_005_QHF1_FH_Rev04_#18_011_SER144_1 SER144 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 27552 22823 0 34164 11428 0 22736 1077 911 0 166 3.2 8 0 0.73 435 2127631 16785 0.79 1334 7.9 134914 8782 7849 6.5 18 1250 14 + 0.72645 1.01 0.44512 0.6438 180326_C18_005_QHF1_FH_Rev04_#18_011_SER144_2 SER144 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 21331 57563 0 77426 37694 0 39732 12235 11385 0 850 16 30 0 2.1 4657 1842997 39095 2.1 6104 16 137374 24052 22940 18 22 5782 24 + 0.67366 0.95835 0.42798 0.6676 180326_C18_005_QHF1_FH_Rev04_#18_011_SER144_3 SER144 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 17018 75499 0 92485 58509 0 33976 30110 29101 0 1009 33 50 0 3 14949 1508156 62423 4.1 6773 11 159034 45889 45051 29 32 9609 21 + 0.60596 0.87526 0.39709 0.61554 180326_C18_005_QHF1_FH_Rev04_#18_011_SER145_1 SER145 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 27811 20998 0 31623 10315 0 21308 1099 924 0 175 3.5 9 0 0.82 411 2188914 15245 0.7 1212 8 142413 8063 7128 5.7 16 1160 14 + 0.78491 1.0735 0.5172 0.73791 180326_C18_005_QHF1_FH_Rev04_#18_011_SER145_2 SER145 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 21880 55008 0 76625 33379 0 43246 9722 9104 0 618 13 27 0 1.4 3263 1850004 36728 2 5631 15 126349 20568 19503 16 22 5098 25 + 0.68976 0.96339 0.46508 0.72149 180326_C18_005_QHF1_FH_Rev04_#18_011_SER145_3 SER145 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 17661 72600 0 89404 55786 0 33618 26987 26210 0 777 30 47 0 2.3 13157 1533895 59357 3.9 6823 11 152460 43049 42339 28 32 9455 22 + 0.5984 0.86639 0.39 0.61453 180326_C18_005_QHF1_FH_Rev04_#18_011_SER146_1 SER146 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 28601 16996 0 25383 8569 0 16814 1067 878 0 189 4.2 10 0 1.1 420 2094596 12609 0.6 965 7.7 136420 6684 5937 4.9 16 928 14 + 0.68163 1.0115 0.4177 0.64383 180326_C18_005_QHF1_FH_Rev04_#18_011_SER146_2 SER146 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 20005 62612 0 81519 43701 0 37818 22103 20013 0 2090 27 46 0 5.5 9854 1414480 48286 3.4 6756 14 126697 32360 31309 26 30 7711 24 + 0.64407 0.92957 0.42014 0.64845 180326_C18_005_QHF1_FH_Rev04_#18_011_SER146_3 SER146 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 18476 68967 0 89081 48847 0 40234 21719 20818 0 901 24 43 0 2.2 10131 1348365 56166 4.2 6034 11 128923 38109 37376 30 34 8167 21 + 0.56267 0.83266 0.36477 0.58883 180326_C18_005_QHF1_FH_Rev04_#18_011_SER147_1 SER147 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 28683 16801 0 25976 7594 0 18382 909 741 0 168 3.5 9.8 0 0.91 365 2191355 12036 0.55 918 7.6 144649 5929 5124 4.1 14 879 15 + 0.79605 1.0893 0.51766 0.74723 180326_C18_005_QHF1_FH_Rev04_#18_011_SER147_2 SER147 2 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 21044 58300 0 77747 38853 0 38894 19190 17392 0 1798 25 45 0 4.6 7656 1471436 42488 2.9 6722 16 117807 26783 25785 23 27 7026 26 + 0.65173 0.9363 0.41381 0.64398 180326_C18_005_QHF1_FH_Rev04_#18_011_SER147_3 SER147 3 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 17589 73232 0 91442 55020 0 36422 31737 30101 0 1636 35 55 0 4.5 14755 1350910 60252 4.5 6505 11 140206 43121 42450 31 34 9172 21 + 0.55064 0.81154 0.3593 0.56964 180326_C18_005_QHF1_PTM_Rev01_#18_011_SER133 SER133 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6269 38169 0 42035 34303 0 7732 22929 21926 0 1003 55 64 0 13 19367 882977 35970 4.1 1085 3 136250 32002 31462 23 26 1688 5.3 + 0.35537 0.5498 0.22395 0.35854 180326_C18_005_QHF1_PTM_Rev01_#18_011_SER134 SER134 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6216 37096 0 40241 33951 0 6290 22425 21648 0 777 56 64 0 12 19012 904233 35450 3.9 832 2.3 141915 32289 31842 23 26 1291 4 + 0.35862 0.55196 0.22784 0.36739 180326_C18_005_QHF1_PTM_Rev01_#18_011_SER135 SER135 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6106 35893 0 39086 32700 0 6386 21138 20310 0 828 54 62 0 13 18178 863173 34010 3.9 973 2.9 133483 30726 30284 23 26 1449 4.7 + 0.35886 0.56466 0.22347 0.36058 180326_C18_005_QHF1_PTM_Rev01_#18_011_SER136 SER136 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6142 37309 0 40502 34116 0 6386 22772 21916 0 856 56 64 0 13 19736 893758 35648 4 813 2.3 141295 32425 31962 23 26 1286 4 + 0.35443 0.55141 0.22388 0.35991 180326_C18_005_QHF1_PTM_Rev01_#18_011_SER137 SER137 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6185 37182 0 40555 33809 0 6746 21708 20894 0 814 54 62 0 12 18668 892896 35266 3.9 953 2.7 140184 31827 31338 23 26 1472 4.6 + 0.36159 0.55889 0.22833 0.36267 180326_C18_005_QHF1_PTM_Rev01_#18_011_SER138 SER138 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6229 38707 0 42399 35015 0 7384 23140 22201 0 939 55 63 0 13 19736 883327 36728 4.2 980 2.7 140658 32963 32456 23 27 1580 4.8 + 0.36773 0.56848 0.236 0.3814 180326_C18_005_QHF1_PTM_Rev01_#18_011_SER139 SER139 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6248 38168 0 41155 35181 0 5974 23672 22920 0 752 58 65 0 13 20375 923382 36539 4 861 2.4 148215 33392 32958 23 26 1366 4.1 + 0.36363 0.56419 0.23413 0.37561 180326_C18_005_QHF1_PTM_Rev01_#18_011_SER140 SER140 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6248 37868 0 41358 34378 0 6980 22661 21766 0 895 55 63 0 13 19141 893302 35800 4 1025 2.9 138648 32234 31781 23 26 1585 4.9 + 0.35475 0.54972 0.22451 0.35994 180326_C18_005_QHF1_PTM_Rev01_#18_011_SER141 SER141 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 6181 37236 0 40932 33540 0 7392 21405 20577 0 828 52 61 0 11 18056 863757 34991 4.1 1096 3.1 132430 31233 30743 24 27 1674 5.4 + 0.35892 0.55338 0.22767 0.36401 180326_C18_005_QHF1_PTM_Rev01_#18_011_SER142 SER142 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Deamidation (NQ) Carbamidomethyl (C) Oxidation (M);Acetyl (Protein N-term) True True 1 2 Standard 5971 33775 0 36953 30597 0 6356 19314 18535 0 779 52 61 0 12 16391 822620 31764 3.9 1023 3.2 123908 28501 28038 23 27 1460 5.1 + 0.35125 0.54886 0.21745 0.35117 Total 3297682 9826030 0 12091752 7551264 0 4540488 3633257 3500751 0 132506 30 46 0 2.9 102145 264572421 29245965 6340328 6183874 22 29 911967 14 0.49638 0.75616 0.32314 0.52717