Raw file Experiment Enzyme Enzyme mode Enzyme first search Enzyme mode first search Use enzyme first search Variable modifications Multi modifications Variable modifications first search Use variable modifications first search Requantify Multiplicity Max. missed cleavages Labels0 LC-MS run type Time-dependent recalibration MS MS/MS MS3 MS/MS Submitted MS/MS Submitted (SIL) MS/MS Submitted (ISO) MS/MS Submitted (PEAK) MS/MS Identified MS/MS Identified (SIL) MS/MS Identified (ISO) MS/MS Identified (PEAK) MS/MS Identified [%] MS/MS Identified (SIL) [%] MS/MS Identified (ISO) [%] MS/MS Identified (PEAK) [%] Peptide Sequences Identified Peaks Peaks Sequenced Peaks Sequenced [%] Peaks Repeatedly Sequenced Peaks Repeatedly Sequenced [%] Isotope Patterns Isotope Patterns Sequenced Isotope Patterns Sequenced (z>1) Isotope Patterns Sequenced [%] Isotope Patterns Sequenced (z>1) [%] Isotope Patterns Repeatedly Sequenced Isotope Patterns Repeatedly Sequenced [%] Recalibrated Av. Absolute Mass Deviation [ppm] Mass Standard Deviation [ppm] Av. Absolute Mass Deviation [mDa] Mass Standard Deviation [mDa] B181215_06_HF_LS_IN_90_ECLP_ID_44 ECLP_ID_44 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 6736 20809 0 21436 20182 0 1254 12393 12244 0 149 57.81 60.67 NaN 11.88 8731 821284 20166 2.46 448 2.22 101230 19302 19154 19.07 21.87 671 3.48 + 0.27415 0.40106 0.19103 0.29631 B181215_07_HF_LS_IN_90_ECLP_ID_43 ECLP_ID_43 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 6698 20878 0 21512 20244 0 1268 11954 11838 0 116 55.57 58.48 NaN 9.15 8156 837874 20256 2.42 412 2.03 103942 19372 19213 18.64 21.27 640 3.3 + 0.27951 0.4153 0.19409 0.30089 B181215_08_HF_LS_IN_90_ECLP_ID_42 ECLP_ID_42 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 6778 19717 0 20292 19142 0 1150 11065 10950 0 115 54.53 57.2 NaN 10 7771 822135 19169 2.33 366 1.91 100510 18375 18210 18.28 20.99 580 3.16 + 0.2751 0.40385 0.18934 0.29211 B181215_09_HF_LS_IN_90_ECLP_ID_41 ECLP_ID_41 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 6730 20211 0 20900 19522 0 1378 11136 11008 0 128 53.28 56.39 NaN 9.29 7657 842717 19560 2.32 402 2.06 101343 18636 18465 18.39 21.23 621 3.33 + 0.28061 0.4146 0.19362 0.29984 B181215_10_HF_LS_IN_90_ECLP_ID_40 ECLP_ID_40 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 6866 19137 0 19704 18570 0 1134 10479 10370 0 109 53.18 55.84 NaN 9.61 7178 810724 18412 2.27 476 2.59 93525 17572 17433 18.79 21.87 706 4.02 + 0.28225 0.41026 0.19655 0.30703 B181215_11_HF_LS_IN_90_ECLP_ID_39 ECLP_ID_39 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 6860 19082 0 19710 18454 0 1256 10175 10066 0 109 51.62 54.55 NaN 8.68 6873 807126 18374 2.28 446 2.43 94162 17486 17295 18.57 21.71 694 3.97 + 0.28428 0.40913 0.19832 0.30603 B181215_12_HF_LS_IN_90_ECLP_ID_38 ECLP_ID_38 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 6844 18961 0 19763 18159 0 1604 8972 8828 0 144 45.4 48.62 NaN 8.98 5942 786920 18292 2.32 423 2.31 91480 17267 17006 18.88 22.08 641 3.71 + 0.29074 0.41718 0.20247 0.3148 B181215_13_HF_LS_IN_90_ECLP_ID_37 ECLP_ID_37 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 6883 18772 0 19557 17987 0 1570 8115 8046 0 69 41.49 44.73 NaN 4.39 5424 784920 18213 2.32 365 2 92419 17222 16921 18.63 21.87 576 3.34 + 0.29624 0.42434 0.20535 0.31411 B181215_14_HF_LS_IN_90_ECLP_ID_36 ECLP_ID_36 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 7166 17639 0 18278 17000 0 1278 8726 8639 0 87 47.74 50.82 NaN 6.81 6000 817919 17175 2.1 312 1.82 90627 16310 16075 18 21.27 518 3.18 + 0.27768 0.3927 0.19191 0.28936 B181215_15_HF_LS_IN_90_ECLP_ID_35 ECLP_ID_35 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 7557 16302 0 16792 15812 0 980 8305 8253 0 52 49.46 52.19 NaN 5.31 5987 897110 15975 1.78 242 1.51 97102 15302 15139 15.76 18.57 405 2.65 + 0.2809 0.40357 0.19312 0.29963 B181215_16_HF_LS_IN_90_ECLP_ID_34 ECLP_ID_34 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 7893 15184 0 15687 14681 0 1006 7676 7636 0 40 48.93 52.01 NaN 3.98 5593 915836 14880 1.62 226 1.52 95610 14190 14023 14.84 17.26 387 2.73 + 0.28108 0.39913 0.19086 0.28903 B181215_17_HF_LS_IN_90_ECLP_ID_33 ECLP_ID_33 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 7943 15030 0 15609 14451 0 1158 7661 7601 0 60 49.08 52.6 NaN 5.18 5725 914863 14698 1.61 240 1.63 95366 13946 13766 14.62 17.26 385 2.76 + 0.28434 0.40168 0.19235 0.28783 B181215_18_HF_LS_IN_90_ECLP_ID_32 ECLP_ID_32 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 9532 9930 0 10209 9651 0 558 5283 5259 0 24 51.75 54.49 NaN 4.3 3992 985063 9787 0.99 107 1.09 88537 9418 9286 10.64 12.74 189 2.01 + 0.26921 0.36707 0.18046 0.26343 B181215_19_HF_LS_IN_90_ECLP_ID_31 ECLP_ID_31 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 8796 12478 0 12984 11972 0 1012 6225 6176 0 49 47.94 51.59 NaN 4.84 4618 959850 12238 1.27 165 1.35 90624 11611 11467 12.81 15.36 285 2.45 + 0.26708 0.36947 0.1796 0.26719 B181215_20_HF_LS_IN_90_ECLP_ID_30 ECLP_ID_30 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 8828 12412 0 12978 11846 0 1132 6059 6026 0 33 46.69 50.87 NaN 2.92 4392 933835 12132 1.3 194 1.6 87773 11404 11237 12.99 15.59 331 2.9 + 0.27424 0.37603 0.18293 0.26522 B181215_21_HF_LS_IN_90_ECLP_ID_29 ECLP_ID_29 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 9079 11593 0 12120 11066 0 1054 5362 5335 0 27 44.24 48.21 NaN 2.56 3877 932928 11339 1.22 187 1.65 86540 10662 10504 12.32 14.92 318 2.98 + 0.27828 0.38295 0.18367 0.26843 B181215_22_HF_LS_IN_90_ECLP_ID_28 ECLP_ID_28 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 8256 14061 0 14683 13439 0 1244 5880 5832 0 48 40.05 43.4 NaN 3.86 4197 896839 13777 1.54 201 1.46 90155 12973 12794 14.39 16.92 371 2.86 + 0.28559 0.39209 0.18829 0.27274 B181215_23_HF_LS_IN_90_ECLP_ID_27 ECLP_ID_27 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 9566 9840 0 10190 9490 0 700 4694 4663 0 31 46.06 49.14 NaN 4.43 3621 936280 9701 1.04 100 1.03 86205 9260 9144 10.74 12.94 185 2 + 0.27828 0.37868 0.18162 0.26067 B181215_24_HF_LS_IN_90_ECLP_ID_26 ECLP_ID_26 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 8863 12218 0 12746 11690 0 1056 5826 5771 0 55 45.71 49.37 NaN 5.21 4458 927967 12000 1.29 137 1.14 90426 11374 11206 12.58 15.13 238 2.09 + 0.28574 0.40595 0.18598 0.27784 B181215_25_HF_LS_IN_90_ECLP_ID_25 ECLP_ID_25 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 8804 12413 0 12949 11877 0 1072 5842 5786 0 56 45.12 48.72 NaN 5.22 4415 931965 12153 1.3 159 1.31 91562 11489 11329 12.55 15.08 283 2.46 + 0.28114 0.39699 0.18315 0.27298 B181215_26_HF_LS_IN_90_ECLP_ID_24 ECLP_ID_24 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 9011 11765 0 12166 11364 0 802 6010 5970 0 40 49.4 52.53 NaN 4.99 4460 920036 11506 1.25 158 1.37 93421 11001 10826 11.78 14.15 251 2.28 + 0.28757 0.38827 0.19118 0.27181 B181215_27_HF_LS_IN_90_ECLP_ID_23 ECLP_ID_23 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 8516 13348 0 13789 12907 0 882 6945 6889 0 56 50.37 53.37 NaN 6.35 5124 861445 12921 1.5 271 2.1 90324 12343 12132 13.67 16.75 390 3.16 + 0.28941 0.39801 0.19297 0.2776 B181215_28_HF_LS_IN_90_ECLP_ID_22 ECLP_ID_22 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 8439 13914 0 14438 13390 0 1048 7002 6929 0 73 48.5 51.75 NaN 6.97 5128 792208 13264 1.67 385 2.9 80128 12571 12392 15.69 18.99 525 4.18 + 0.28304 0.38832 0.1854 0.26593 B181215_29_HF_LS_IN_90_ECLP_ID_21 ECLP_ID_21 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 7822 16093 0 16870 15316 0 1554 7967 7850 0 117 47.23 51.25 NaN 7.53 5448 712915 15167 2.13 484 3.19 75459 14173 13963 18.78 22.58 702 4.95 + 0.27872 0.38629 0.18558 0.27095 B181215_30_HF_LS_IN_90_ECLP_ID_20 ECLP_ID_20 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 7794 15895 0 16475 15315 0 1160 7173 7107 0 66 43.54 46.41 NaN 5.69 5224 745993 15429 2.07 303 1.96 84504 14636 14364 17.32 21.28 497 3.4 + 0.28154 0.3982 0.18694 0.28063 B181215_31_HF_LS_IN_90_ECLP_ID_19 ECLP_ID_19 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 7453 16953 0 17561 16345 0 1216 7960 7894 0 66 45.33 48.3 NaN 5.43 5654 722530 16400 2.27 356 2.17 83593 15561 15298 18.62 22.6 552 3.55 + 0.27904 0.38948 0.1864 0.28005 B181215_32_HF_LS_IN_90_ECLP_ID_18 ECLP_ID_18 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 7204 18052 0 18775 17329 0 1446 7962 7858 0 104 42.41 45.35 NaN 7.19 5613 743793 17301 2.33 435 2.51 86294 16351 16093 18.95 23 644 3.94 + 0.28349 0.41197 0.18796 0.28375 B181215_33_HF_LS_IN_90_ECLP_ID_17 ECLP_ID_17 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 7264 17857 0 18540 17174 0 1366 8123 8028 0 95 43.81 46.75 NaN 6.95 5819 740988 17106 2.31 448 2.62 86917 16206 15901 18.65 22.58 643 3.97 + 0.2862 0.40972 0.18958 0.28758 B181215_34_HF_LS_IN_90_ECLP_ID_16 ECLP_ID_16 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 7746 16267 0 16934 15600 0 1334 8282 8175 0 107 48.91 52.4 NaN 8.02 5936 756760 15521 2.05 411 2.65 82075 14641 14404 17.84 21.9 609 4.16 + 0.28494 0.41402 0.18779 0.28234 B181215_35_HF_LS_IN_90_ECLP_ID_15 ECLP_ID_15 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 8038 15273 0 15784 14762 0 1022 8497 8414 0 83 53.83 57 NaN 8.12 6358 762430 14572 1.91 386 2.65 79267 13873 13650 17.5 21.26 539 3.89 + 0.26838 0.37731 0.17789 0.26289 B181215_36_HF_LS_IN_90_ECLP_ID_14 ECLP_ID_14 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 8077 15178 0 15692 14664 0 1028 8297 8210 0 87 52.87 55.99 NaN 8.46 6334 798435 14655 1.84 306 2.09 86892 13987 13777 16.1 19.55 445 3.18 + 0.26869 0.3756 0.17673 0.25758 B181215_37_HF_LS_IN_90_ECLP_ID_13 ECLP_ID_13 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 8295 14420 0 14831 14009 0 822 7725 7665 0 60 52.09 54.71 NaN 7.3 6002 837585 14034 1.68 246 1.75 91052 13467 13283 14.79 17.96 375 2.78 + 0.26755 0.37037 0.17555 0.25568 B181215_38_HF_LS_IN_90_ECLP_ID_12 ECLP_ID_12 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 8487 13745 0 14236 13254 0 982 7431 7375 0 56 52.2 55.64 NaN 5.7 5772 845986 13423 1.59 201 1.5 90056 12788 12597 14.2 17.2 326 2.55 + 0.26336 0.37059 0.17402 0.25839 B181215_39_HF_LS_IN_90_ECLP_ID_11 ECLP_ID_11 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 8937 12166 0 12635 11697 0 938 6906 6858 0 48 54.66 58.63 NaN 5.12 5370 867391 11781 1.36 214 1.82 85392 11186 11007 13.1 15.83 317 2.83 + 0.26161 0.36758 0.17332 0.25468 B181215_40_HF_LS_IN_90_ECLP_ID_10 ECLP_ID_10 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 9101 11351 0 11783 10919 0 864 6361 6336 0 25 53.98 58.03 NaN 2.89 4930 904915 11161 1.23 135 1.21 91266 10627 10464 11.64 14.17 213 2 + 0.26673 0.37403 0.17864 0.26328 B181215_41_HF_LS_IN_90_ECLP_ID_09 ECLP_ID_09 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 9831 8911 0 9208 8614 0 594 5618 5597 0 21 61.01 64.98 NaN 3.54 4495 965246 8864 0.92 38 0.43 91262 8518 8379 9.33 11.59 86 1.01 + 0.24607 0.33787 0.16519 0.23984 B181215_42_HF_LS_IN_90_ECLP_ID_08 ECLP_ID_08 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 9729 9452 0 9761 9143 0 618 6064 6022 0 42 62.12 65.86 NaN 6.8 5069 945973 9337 0.99 68 0.73 86531 8958 8851 10.35 12.78 136 1.52 + 0.25354 0.35627 0.16417 0.2389 B181215_43_HF_LS_IN_90_ECLP_ID_07 ECLP_ID_07 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 8850 12182 0 12712 11652 0 1060 6528 6481 0 47 51.35 55.62 NaN 4.43 5238 945483 11954 1.26 142 1.19 90941 11281 11113 12.4 15.01 283 2.51 + 0.28517 0.38948 0.18878 0.27214 B181215_44_HF_LS_IN_90_ECLP_ID_06 ECLP_ID_06 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 8006 14811 0 15553 14069 0 1484 7319 7282 0 37 47.06 51.76 NaN 2.49 5640 912338 14461 1.59 211 1.46 93588 13566 13360 14.5 17.36 383 2.82 + 0.29489 0.41745 0.19823 0.29819 B181215_45_HF_LS_IN_90_ECLP_ID_05 ECLP_ID_05 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 8782 12333 0 12796 11870 0 926 7191 7133 0 58 56.2 60.09 NaN 6.26 5939 931707 12167 1.31 112 0.92 92527 11604 11457 12.54 15.03 208 1.79 + 0.27346 0.38883 0.18235 0.27442 B181215_46_HF_LS_IN_90_ECLP_ID_04 ECLP_ID_04 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 8855 12196 0 12615 11777 0 838 8334 8287 0 47 66.06 70.37 NaN 5.61 7148 955265 12135 1.27 39 0.32 97648 11659 11522 11.94 14.21 97 0.83 + 0.2398 0.34425 0.15897 0.23831 B181215_47_HF_LS_IN_90_ECLP_ID_03 ECLP_ID_03 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 9093 11371 0 11814 10928 0 886 7630 7577 0 53 64.58 69.34 NaN 5.98 6517 979510 11318 1.16 39 0.34 97146 10828 10698 11.15 13.5 92 0.85 + 0.23772 0.34619 0.15585 0.23656 B181215_48_HF_LS_IN_90_ECLP_ID_02 ECLP_ID_02 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 9184 11112 0 11593 10631 0 962 7183 7121 0 62 61.96 66.98 NaN 6.44 6201 980890 11076 1.13 24 0.22 95135 10561 10421 11.1 13.4 69 0.65 + 0.25102 0.35916 0.16466 0.24424 B181215_49_HF_LS_IN_90_ECLP_ID_01 ECLP_ID_01 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False False 1 2 Standard 6675 19639 0 20371 18907 0 1464 11504 11375 0 129 56.47 60.16 NaN 8.81 9090 920260 19320 2.1 208 1.08 113350 18476 18311 16.3 18.57 328 1.78 + 0.27796 0.41111 0.18938 0.29534 ECLP_ID_01 9090 ECLP_ID_02 6201 ECLP_ID_03 6517 ECLP_ID_04 7148 ECLP_ID_05 5939 ECLP_ID_06 5640 ECLP_ID_07 5238 ECLP_ID_08 5069 ECLP_ID_09 4495 ECLP_ID_10 4930 ECLP_ID_11 5370 ECLP_ID_12 5772 ECLP_ID_13 6002 ECLP_ID_14 6334 ECLP_ID_15 6358 ECLP_ID_16 5936 ECLP_ID_17 5819 ECLP_ID_18 5613 ECLP_ID_19 5654 ECLP_ID_20 5224 ECLP_ID_21 5448 ECLP_ID_22 5128 ECLP_ID_23 5124 ECLP_ID_24 4460 ECLP_ID_25 4415 ECLP_ID_26 4458 ECLP_ID_27 3621 ECLP_ID_28 4197 ECLP_ID_29 3877 ECLP_ID_30 4392 ECLP_ID_31 4618 ECLP_ID_32 3992 ECLP_ID_33 5725 ECLP_ID_34 5593 ECLP_ID_35 5987 ECLP_ID_36 6000 ECLP_ID_37 5424 ECLP_ID_38 5942 ECLP_ID_39 6873 ECLP_ID_40 7178 ECLP_ID_41 7657 ECLP_ID_42 7771 ECLP_ID_43 8156 ECLP_ID_44 8731 Total 357867 650951 0 675031 626871 0 48160 341840 338760 0 3080 50.64 54.04 NaN 6.4 36471 38114237 4013906 602033 593930 15 17.9 17734 2.95 0.27559 0.39209 0.1854 0.27915