Raw file	Experiment	Enzyme	Enzyme mode	Enzyme first search	Enzyme mode first search	Use enzyme first search	Variable modifications	Fixed modifications	Multi modifications	Variable modifications first search	Use variable modifications first search	Requantify	Multiplicity	Max. missed cleavages	Labels0	LC-MS run type	Time-dependent recalibration	MS	MS/MS	MS3	MS/MS Submitted	MS/MS Submitted (SIL)	MS/MS Submitted (ISO)	MS/MS Submitted (PEAK)	MS/MS Identified	MS/MS Identified (SIL)	MS/MS Identified (ISO)	MS/MS Identified (PEAK)	MS/MS Identified [%]	MS/MS Identified (SIL) [%]	MS/MS Identified (ISO) [%]	MS/MS Identified (PEAK) [%]	Peptide Sequences Identified	Peaks	Peaks Sequenced	Peaks Sequenced [%]	Peaks Repeatedly Sequenced	Peaks Repeatedly Sequenced [%]	Isotope Patterns	Isotope Patterns Sequenced	Isotope Patterns Sequenced (z>1)	Isotope Patterns Sequenced [%]	Isotope Patterns Sequenced (z>1) [%]	Isotope Patterns Repeatedly Sequenced	Isotope Patterns Repeatedly Sequenced [%]	Recalibrated	Av. Absolute Mass Deviation [ppm]	Mass Standard Deviation [ppm]	Av. Absolute Mass Deviation [mDa]	Mass Standard Deviation [mDa]	Label free norm param
20190218_JEBM_GFP2	2	Trypsin/P	Semispecific	Trypsin/P	Specific	True	Pyl->PocK;Pyl->TCOK;GFP-Chromophore	Carbamidomethyl (C)			False	True	1	0		Standard		4121	11623	0	14505	8741	0	5764	158	133	0	25	1.09	1.52	NaN	0.43	43	143973	6047	4.2	3747	61.96	15087	4335	4208	28.73	35.29	2946	67.96	+	0.76834	0.90008	0.50132	0.59871	
20190218_JEBM_GFP3	3	Trypsin/P	Semispecific	Trypsin/P	Specific	True	Pyl->PocK;Pyl->TCOK;GFP-Chromophore	Carbamidomethyl (C)			False	True	1	0		Standard		4007	12140	0	14607	9673	0	4934	91	79	0	12	0.62	0.82	NaN	0.24	38	160602	6733	4.19	3864	57.39	18030	5111	4992	28.35	35.46	3173	62.08	+	0.86923	1.0372	0.61338	0.76251	
Total																		8128	23763	0	29112	18414	0	10698	249	212	0	37	0.86	1.15	NaN	0.35	60	304575					33117	9446	9200	28.52	35.39	6119	64.78		0.80661	0.95442	0.54383	0.6656